Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold5G02941 Striga asiatica HOM05D000916 ORTHO05D009274 2.2e-101 372.5 212 100.0
Migut.N01806 Erythranthe guttata HOM05D000916 ORTHO05D009274 3.8e-53 212.2 214 56.5
Oeu049471.1 Olea europaea HOM05D000916 ORTHO05D009274 5.1e-50 201.8 207 54.6
MSTRG.5047 Avicennia marina HOM05D000916 ORTHO05D009274 2.8e-48 196.1 210 57.1
Actinidia06285 Actinidia chinensis HOM05D000916 ORTHO05D009274 1.4e-42 177.2 127 66.9
GSVIVG01001443001 Vitis vinifera HOM05D000916 ORTHO05D009274 1.4e-42 177.2 124 67.7
AUR62023107 Chenopodium quinoa HOM05D000916 ORTHO05D009274 3.0e-42 176.0 207 49.3
Peaxi162Scf01108g00212 Petunia axillaris HOM05D000916 ORTHO05D009274 3.0e-42 176.0 221 50.2
FAN03G1280 Fragaria x ananassa HOM05D000916 ORTHO05D009274 3.9e-42 175.6 136 65.4
Lsat_1_v5_gn_7_34400 Lactuca sativa HOM05D000916 ORTHO05D009274 3.9e-42 175.6 212 48.1
CAN.G410.4 Capsicum annuum HOM05D000916 ORTHO05D009274 6.7e-42 174.9 219 48.4
Nitab4.5_0002888g0050 Nicotiana tabacum HOM05D000916 ORTHO05D009274 6.7e-42 174.9 126 65.9
Dinv07424 Davidia involucrata HOM05D000916 ORTHO05D009274 1.1e-41 174.1 215 48.4
Solyc01g088030.4 Solanum lycopersicum HOM05D000916 ORTHO05D009274 2.0e-41 173.3 215 48.4
Sopen01g034920 Solanum pennellii HOM05D000916 ORTHO05D009274 2.0e-41 173.3 215 47.4
EL10Ac2g04385 Beta vulgaris HOM05D000916 ORTHO05D009274 2.6e-41 172.9 127 65.4
FvH4_7g01930 Fragaria vesca HOM05D000916 ORTHO05D009274 3.3e-41 172.6 134 62.7
FAN06G1234 Fragaria x ananassa HOM05D000916 ORTHO05D009274 3.3e-41 172.6 134 62.7
RcHm_v2.0_Chr1g0318771 Rosa chinensis HOM05D000916 ORTHO05D009274 3.3e-41 172.6 216 47.7
Cc04_g14680 Coffea canephora HOM05D000916 ORTHO05D009274 1.7e-40 170.2 210 51.0
TAR636G0367 Trochodendron aralioides HOM05D000916 ORTHO05D009274 1.7e-40 170.2 125 64.8
PGSC0003DMG400006832 Solanum tuberosum HOM05D000916 ORTHO05D009274 2.2e-40 169.9 221 46.6
TWI53G0499 Tripterygium wilfordii HOM05D000916 ORTHO05D009274 2.2e-40 169.9 127 63.8
Eucgr.G03277 Eucalyptus grandis HOM05D000916 ORTHO05D009274 3.7e-40 169.1 133 62.4
Nn2g15166 Nelumbo nucifera HOM05D000916 ORTHO05D009274 3.7e-40 169.1 128 62.5
DCAR_022368 Daucus carota HOM05D000916 ORTHO05D009274 4.8e-40 168.7 207 46.9
TAR636G3509 Trochodendron aralioides HOM05D000916 ORTHO05D009274 4.8e-40 168.7 211 45.5
Gorai.004G067400 Gossypium raimondii HOM05D000916 ORTHO05D009274 6.3e-40 168.3 127 63.0
Manes.07G012200 Manihot esculenta HOM05D000916 ORTHO05D009274 6.3e-40 168.3 211 47.9
Medtr0003s0480 Medicago truncatula HOM05D000916 ORTHO05D009274 6.3e-40 168.3 134 61.9
arahy.Tifrunner.gnm1.ann1.W0KZJE Arachis hypogaea HOM05D000916 ORTHO05D009274 8.2e-40 167.9 128 64.1
CiPaw.14G004300 Carya illinoinensis HOM05D000916 ORTHO05D009274 8.2e-40 167.9 134 61.2
Psat0s488g0040 Pisum sativum HOM05D000916 ORTHO05D009274 8.2e-40 167.9 126 63.5
CSS0046245 Camellia sinensis var. sinensis HOM05D000916 ORTHO05D009274 2.4e-39 166.4 127 62.2
PGR031G2328 Punica granatum HOM05D000916 ORTHO05D009274 4.1e-39 165.6 130 60.0
Gohir.D08G065100 Gossypium hirsutum HOM05D000916 ORTHO05D009274 5.3e-39 165.2 127 61.4
Lj3g0014758 Lotus japonicus HOM05D000916 ORTHO05D009274 5.3e-39 165.2 134 61.2
Ciclev10032919m.g Citrus clementina HOM05D000916 ORTHO05D009274 7.0e-39 164.9 126 62.7
Lj9P642T24 Lonicera japonica HOM05D000916 ORTHO05D009274 7.0e-39 164.9 128 64.8
Rhsim07G0060200 Rhododendron simsii HOM05D000916 ORTHO05D009274 1.6e-38 163.7 129 62.0
Prupe.2G025000 Prunus persica HOM05D000916 ORTHO05D009274 2.0e-38 163.3 134 61.9
COL.COLO4_12325 Corchorus olitorius HOM05D000916 ORTHO05D003833 2.6e-38 162.9 126 61.9
Phvul.011G013300 Phaseolus vulgaris HOM05D000916 ORTHO05D009274 2.6e-38 162.9 131 60.3
VMungo1127G0561 Vigna mungo HOM05D000916 ORTHO05D009274 2.6e-38 162.9 131 59.5
Atru.chr11.2553 Acer truncatum HOM05D000916 ORTHO05D009274 3.5e-38 162.5 129 61.2
Glyma.09G226100 Glycine max HOM05D000916 ORTHO05D009274 3.5e-38 162.5 129 62.8
PSO170G4961 Papaver somniferum HOM05D000916 ORTHO05D009274 5.9e-38 161.8 128 60.2
HanXRQChr15g0480451 Helianthus annuus HOM05D000916 ORTHO05D009274 1.3e-37 160.6 211 46.4
Potri.001G259216 Populus trichocarpa HOM05D000916 ORTHO05D009274 2.9e-37 159.5 128 61.7
Potri.001G259900 Populus trichocarpa HOM05D000916 ORTHO05D009274 2.9e-37 159.5 128 61.7
Aqoxy2G00212 Aquilegia oxysepala HOM05D000916 ORTHO05D009274 8.5e-37 157.9 211 44.5
PSO210G2598 Papaver somniferum HOM05D000916 ORTHO05D009274 2.5e-36 156.4 131 58.8
FAN03G2260 Fragaria x ananassa HOM05D000916 ORTHO05D009274 5.5e-36 155.2 117 68.4
Cpa.g.sc197.27 Carica papaya HOM05D000916 ORTHO05D009274 7.2e-36 154.8 132 59.8
Potri.001G260600 Populus trichocarpa HOM05D000916 ORTHO05D009274 7.2e-36 154.8 123 62.6
Rhsim07G0060800 Rhododendron simsii HOM05D000916 ORTHO05D009274 7.2e-36 154.8 227 44.5
vmacro13705 Vaccinium macrocarpon HOM05D000916 ORTHO05D009274 6.7e-34 148.3 249 43.4
Aa31LG9G13290 Aethionema arabicum HOM05D000916 ORTHO05D009274 1.1e-33 147.5 211 43.1
Carub.0008s0547 Capsella rubella HOM05D000916 ORTHO05D009274 1.1e-33 147.5 122 57.4
CsaV3_3G031830 Cucumis sativus L. HOM05D000916 ORTHO05D009274 2.0e-33 146.7 124 56.5
Sc11g0009010 Simmondsia chinensis HOM05D000916 ORTHO05D009274 4.4e-33 145.6 128 57.8
BcaB07g30592 Brassica carinata HOM05D000916 ORTHO05D009274 7.5e-33 144.8 122 55.7
ClCG10G012070 Citrullus lanatus HOM05D000916 ORTHO05D009274 7.5e-33 144.8 123 53.7
AT5G43210 Arabidopsis thaliana HOM05D000916 ORTHO05D009274 9.7e-33 144.4 208 40.9
MELO3C024009.2 Cucumis melo HOM05D000916 ORTHO05D009274 1.7e-32 143.7 124 54.8
Sp2g08020 Schrenkiella parvula HOM05D000916 ORTHO05D009274 1.7e-32 143.7 122 55.7
THA.LOC104826696 Tarenaya hassleriana HOM05D000916 ORTHO05D009274 2.8e-32 142.9 208 42.3
THA.LOC104826705 Tarenaya hassleriana HOM05D000916 ORTHO05D009274 2.8e-32 142.9 208 42.3
Thhalv10003279m.g Eutrema salsugineum HOM05D000916 ORTHO05D009274 8.2e-32 141.4 122 55.7
Sed0025824 Sechium edule HOM05D000916 ORTHO05D009274 1.1e-31 141.0 127 52.8
A02p27690 Brassica napus HOM05D000916 ORTHO05D009274 1.8e-31 140.2 211 39.8
BraA02t07808Z Brassica rapa HOM05D000916 ORTHO05D009274 1.8e-31 140.2 211 39.8
Potri.001G260300 Populus trichocarpa HOM05D000916 ORTHO05D009274 3.1e-31 139.4 94 69.1
MBI11_g21817_MAGBIO Magnolia biondii HOM05D000916 ORTHO05D009274 4.1e-31 139.0 130 57.7
CANSAT80G0736 Cannabis sativa HOM05D000916 ORTHO05D009274 1.2e-30 137.5 194 44.3
Hma1.2p1_0579F.1_g182540 Hydrangea macrophylla HOM05D000916 ORTHO05D009274 1.2e-30 137.5 89 70.8
AUR62009428 Chenopodium quinoa HOM05D000916 ORTHO05D009274 1.6e-30 137.1 102 63.7
THA.LOC104827433 Tarenaya hassleriana HOM05D000916 ORTHO05D009274 3.5e-30 136.0 199 42.7
TAR636G0653 Trochodendron aralioides HOM05D000916 ORTHO05D009274 3.5e-30 136.0 167 46.1
ATR0782G182 Amborella trichopoda HOM05D000916 ORTHO05D009274 6.5e-29 131.7 126 52.4
Os11g0146550 Oryza sativa ssp. japonica HOM05D000916 ORTHO05D009274 4.2e-28 129.0 122 54.9
Ah.16g100710 Amaranthus hybridus HOM05D000916 ORTHO05D009274 7.2e-28 128.3 104 56.7
CDE11G0804 Ceratophyllum demersum HOM05D000916 ORTHO05D009274 7.2e-28 128.3 121 54.5
Zm00001eb405020 Zea mays HOM05D000916 ORTHO05D009274 8.0e-27 124.8 119 54.6
Duzib133G0774 Durio zibethinus HOM05D000916 ORTHO05D009274 2.6e-25 119.8 97 58.8
MD02G1299300 Malus domestica HOM05D000916 ORTHO05D009274 3.4e-25 119.4 100 56.0
Gohir.A08G055800 Gossypium hirsutum HOM05D000916 ORTHO05D009274 4.4e-25 119.0 96 57.3
FAN01G3008 Fragaria x ananassa HOM05D000916 ORTHO05D009274 1.1e-23 114.4 68 75.0
RcHm_v2.0_Chr1g0318641 Rosa chinensis HOM05D000916 ORTHO05D009274 1.4e-23 114.0 162 43.8
Lalb_Chr03g0024151 Lupinus albus HOM05D000916 ORTHO05D009274 2.4e-23 113.2 99 54.5
Sabra16G0159300 Salix brachista HOM05D000916 ORTHO05D009274 1.2e-22 110.9 97 57.7
SEGI_20425 Sequoiadendron giganteum HOM05D000916 ORTHO05D009274 3.5e-22 109.4 91 56.0
Cfa010832 Carpinus fangiana HOM05D000916 ORTHO05D009274 7.7e-22 108.2 70 67.1
AL8G17370 Arabidopsis lyrata HOM05D000916 ORTHO05D009274 3.0e-18 96.3 143 40.6
Mapoly0059s0058 Marchantia polymorpha HOM05D000916 ORTHO05D009274 1.1e-15 87.8 121 41.3
AagrBONN_evm.TU.Sc2ySwM_117.2289 Anthoceros agrestis HOM05D000916 ORTHO05D009274 5.4e-15 85.5 112 42.0
Haze_03122 Corylus avellana HOM05D000916 ORTHO05D009274 7.0e-15 85.1 134 41.8
Os12g0143300 Oryza sativa ssp. japonica HOM05D000916 ORTHO05D009274 3.5e-14 82.8 63 61.9
Atru.chr11.2549 Acer truncatum HOM05D000916 ORTHO05D009274 1.5e-12 77.4 70 51.4
AagrBONN_evm.TU.Sc2ySwM_117.2287 Anthoceros agrestis HOM05D000916 ORTHO05D009274 4.3e-12 75.9 75 50.7
Nitab4.5_0006695g0040 Nicotiana tabacum HOM05D000916 ORTHO05D009274 7.3e-12 75.1 124 41.1
RcHm_v2.0_Chr1g0318631 Rosa chinensis HOM05D000916 ORTHO05D009274 9.8e-09 64.7 80 47.5
CBR_g31178 Chara braunii HOM05D002376 ORTHO05D004654 1.4e-07 60.8 82 39.0
DCAR_004798 Daucus carota HOM05D002376 ORTHO05D004654 3.2e-07 59.7 104 36.5
AagrBONN_evm.TU.Sc2ySwM_369.511 Anthoceros agrestis HOM05D002376 ORTHO05D004654 7.0e-07 58.5 96 38.5
Cre07.g351500 Chlamydomonas reinhardtii HOM05D002376 ORTHO05D004654 1.2e-06 57.8 75 41.3
Cpa.g.sc2.324 Carica papaya HOM05D002376 ORTHO05D004654 2.7e-06 56.6 91 34.1
Cfa023829 Carpinus fangiana HOM05D002376 ORTHO05D004654 2.7e-06 56.6 74 43.2
PRCOL_00003986 Prasinoderma coloniale HOM05D000916 ORTHO05D009274 2.7e-06 56.6 124 34.7
SMO364G0016 Selaginella moellendorffii HOM05D002376 ORTHO05D004654 3.5e-06 56.2 87 39.1
unitig_747.g21450 Utricularia gibba HOM05D002376 ORTHO05D004654 5.9e-06 55.5 69 39.1
HPP92_022854 Vanilla planifolia HOM05D003671 ORTHO05D004654 5.9e-06 55.5 91 35.2
Duzib168G1857 Durio zibethinus HOM05D002376 ORTHO05D004654 7.8e-06 55.1 87 35.6


User provided reference genes

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