Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold59G20747 Striga asiatica HOM05D003818 ORTHO05D004541 4.5e-74 281.2 143 100.0
MSTRG.27132 Avicennia marina HOM05D003818 ORTHO05D004541 3.4e-66 255.0 143 89.5
Cc02_g03330 Coffea canephora HOM05D003818 ORTHO05D004541 5.9e-66 254.2 143 90.9
PGSC0003DMG400008922 Solanum tuberosum HOM05D003818 ORTHO05D004541 5.9e-66 254.2 143 91.6
Migut.K00399 Erythranthe guttata HOM05D003818 ORTHO05D004541 1.3e-65 253.1 144 90.3
Solyc09g010500.3 Solanum lycopersicum HOM05D003818 ORTHO05D004541 1.7e-65 252.7 143 90.2
Sopen09g005230 Solanum pennellii HOM05D003818 ORTHO05D004541 1.7e-65 252.7 143 90.2
Oeu061636.1 Olea europaea HOM05D003818 ORTHO05D004541 2.2e-65 252.3 144 90.3
SGA_v2.0_scaffold50G18457 Striga asiatica HOM05D003818 ORTHO05D004541 1.9e-64 249.2 179 77.1
Dinv28474 Davidia involucrata HOM05D003818 ORTHO05D004541 2.5e-64 248.8 144 87.5
Dinv35185 Davidia involucrata HOM05D003818 ORTHO05D004541 8.0e-63 243.8 144 86.1
HanXRQChr16g0532841 Helianthus annuus HOM05D003818 ORTHO05D004541 5.2e-62 241.1 145 85.5
MBI04_g00300_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 1.3e-60 236.5 145 85.5
Nn3g21139 Nelumbo nucifera HOM05D003818 ORTHO05D004541 3.7e-60 235.0 145 86.2
TAR374G0305 Trochodendron aralioides HOM05D003818 ORTHO05D004541 8.2e-60 233.8 144 84.7
Actinidia31809 Actinidia chinensis HOM05D003818 ORTHO05D004541 1.1e-59 233.4 142 83.8
Rhsim05G0017100 Rhododendron simsii HOM05D003818 ORTHO05D004541 3.1e-59 231.9 145 84.1
HanXRQChr04g0108631 Helianthus annuus HOM05D003818 ORTHO05D004541 4.1e-59 231.5 146 82.9
Nitab4.5_0017332g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 4.1e-59 231.5 150 81.3
Rhsim03G0177700 Rhododendron simsii HOM05D003818 ORTHO05D004541 7.0e-59 230.7 145 84.1
Lsat_1_v5_gn_1_9221 Lactuca sativa HOM05D003818 ORTHO05D004541 2.0e-58 229.2 146 82.2
QL06p049138 Quercus lobata HOM05D003818 ORTHO05D004541 7.7e-58 227.3 144 86.1
MBI07_g30196_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 1.3e-57 226.5 145 84.1
Manes.06G144400 Manihot esculenta HOM05D003818 ORTHO05D004541 1.3e-57 226.5 146 86.3
TAR375G1045 Trochodendron aralioides HOM05D003818 ORTHO05D004541 3.8e-57 224.9 142 84.5
GSVIVG01010613001 Vitis vinifera HOM05D003818 ORTHO05D004541 3.8e-57 224.9 145 86.2
PGR102G2559 Punica granatum HOM05D003818 ORTHO05D004541 5.0e-57 224.6 146 83.6
Peaxi162Scf00039g01318 Petunia axillaris HOM05D003818 ORTHO05D004541 6.5e-57 224.2 142 82.4
CSS0048006 Camellia sinensis var. sinensis HOM05D003818 ORTHO05D004541 8.5e-57 223.8 135 84.4
MSTRG.26327 Avicennia marina HOM05D003818 ORTHO05D004541 1.1e-56 223.4 143 82.5
ATR0757G129 Amborella trichopoda HOM05D003818 ORTHO05D004541 4.2e-56 221.5 146 84.9
Eucgr.H00421 Eucalyptus grandis HOM05D003818 ORTHO05D004541 7.2e-56 220.7 145 84.1
Potri.015G138800 Populus trichocarpa HOM05D003818 ORTHO05D004541 9.4e-56 220.3 146 82.2
Sabra15G0149800 Salix brachista HOM05D003818 ORTHO05D004541 9.4e-56 220.3 146 82.2
CiPaw.04G066900 Carya illinoinensis HOM05D003818 ORTHO05D004541 1.2e-55 219.9 144 82.6
Cpa.g.sc370.10 Carica papaya HOM05D003818 ORTHO05D004541 1.6e-55 219.5 144 82.6
FAN15G1651 Fragaria x ananassa HOM05D003818 ORTHO05D004541 1.6e-55 219.5 144 81.2
FAN27G0424 Fragaria x ananassa HOM05D003818 ORTHO05D004541 2.1e-55 219.2 144 80.6
Manes.14G028600 Manihot esculenta HOM05D003818 ORTHO05D004541 2.1e-55 219.2 146 82.9
Glyma.20G155900 Glycine max HOM05D003818 ORTHO05D004541 2.7e-55 218.8 145 81.4
CsaV3_3G016860 Cucumis sativus L. HOM05D003818 ORTHO05D004541 3.6e-55 218.4 143 82.5
FvH4_2g14180 Fragaria vesca HOM05D003818 ORTHO05D004541 3.6e-55 218.4 144 80.6
FAN24G1752 Fragaria x ananassa HOM05D003818 ORTHO05D004541 3.6e-55 218.4 144 80.6
Hma1.2p1_0099F.1_g048510 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 3.6e-55 218.4 144 79.9
Os03g0586600 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 3.6e-55 218.4 142 82.4
Potri.012G136900 Populus trichocarpa HOM05D003818 ORTHO05D004541 3.6e-55 218.4 146 81.5
Glyma.10G238600 Glycine max HOM05D003818 ORTHO05D004541 4.7e-55 218.0 145 81.4
LjContig00564g0007738 Lotus japonicus HOM05D003818 ORTHO05D004541 4.7e-55 218.0 144 81.2
Psat3g070640 Pisum sativum HOM05D003818 ORTHO05D004541 6.1e-55 217.6 148 81.1
Sed0011620 Sechium edule HOM05D003818 ORTHO05D004541 6.1e-55 217.6 144 84.0
MD12G1011200 Malus domestica HOM05D003818 ORTHO05D004541 8.0e-55 217.2 148 82.4
GSVIVG01020800001 Vitis vinifera HOM05D003818 ORTHO05D004541 8.0e-55 217.2 145 84.1
Zm00001eb219520 Zea mays HOM05D003818 ORTHO05D004541 8.0e-55 217.2 145 82.8
Prupe.3G134400 Prunus persica HOM05D003818 ORTHO05D004541 1.8e-54 216.1 146 79.5
Cfa020017 Carpinus fangiana HOM05D003818 ORTHO05D004541 3.0e-54 215.3 134 85.8
Lj2g0002682 Lotus japonicus HOM05D003818 ORTHO05D004541 3.0e-54 215.3 147 80.3
Lalb_Chr21g0304961 Lupinus albus HOM05D003818 ORTHO05D004541 3.0e-54 215.3 146 78.8
Phvul.007G009900 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 3.0e-54 215.3 141 80.1
arahy.Tifrunner.gnm1.ann1.7N83Z4 Arachis hypogaea HOM05D003818 ORTHO05D004541 4.0e-54 214.9 144 81.2
arahy.Tifrunner.gnm1.ann1.Y3E72Q Arachis hypogaea HOM05D003818 ORTHO05D004541 4.0e-54 214.9 144 81.2
RcHm_v2.0_Chr6g0276321 Rosa chinensis HOM05D003818 ORTHO05D004541 4.0e-54 214.9 144 80.6
Sed0012084 Sechium edule HOM05D003818 ORTHO05D004541 5.2e-54 214.5 143 82.5
Haze_13747 Corylus avellana HOM05D003818 ORTHO05D004541 6.7e-54 214.2 135 86.7
Phvul.007G066800 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 8.8e-54 213.8 145 81.4
TWI23G0179 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 8.8e-54 213.8 146 82.2
VMungo0720G0599 Vigna mungo HOM05D003818 ORTHO05D004541 8.8e-54 213.8 145 81.4
Peaxi162Scf01172g00037 Petunia axillaris HOM05D003818 ORTHO05D004541 1.2e-53 213.4 137 81.0
Medtr0019s0160 Medicago truncatula HOM05D003818 ORTHO05D004541 1.5e-53 213.0 147 79.6
MD17G1234800 Malus domestica HOM05D003818 ORTHO05D004541 2.0e-53 212.6 146 78.1
TPR.G3844 Trifolium pratense HOM05D003818 ORTHO05D004541 2.0e-53 212.6 144 79.9
Medtr7g092450 Medicago truncatula HOM05D003818 ORTHO05D004541 5.7e-53 211.1 148 80.4
Duzib068G1062 Durio zibethinus HOM05D003818 ORTHO05D004541 7.5e-53 210.7 147 81.6
TWI39G1222 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 7.5e-53 210.7 146 81.5
VMungo0720G0479 Vigna mungo HOM05D001872 ORTHO05D001859 7.5e-53 210.7 140 79.3
Cfa008286 Carpinus fangiana HOM05D003818 ORTHO05D004541 9.7e-53 210.3 134 85.8
DCAR_018174 Daucus carota HOM05D003818 ORTHO05D004541 9.7e-53 210.3 146 77.4
Oeu030115.1 Olea europaea HOM05D003818 ORTHO05D004541 9.7e-53 210.3 144 79.9
Gohir.A11G009700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 2.8e-52 208.8 147 81.0
Sabra12G0102700 Salix brachista HOM05D003818 ORTHO05D004541 3.7e-52 208.4 159 74.2
MELO3C006881.2 Cucumis melo HOM05D003818 ORTHO05D004541 6.3e-52 207.6 131 85.5
Gohir.D11G009000 Gossypium hirsutum HOM05D003818 ORTHO05D004541 1.1e-51 206.8 147 80.3
Gorai.007G010600 Gossypium raimondii HOM05D003818 ORTHO05D004541 1.1e-51 206.8 147 80.3
ClCG05G016800 Citrullus lanatus HOM05D002695 ORTHO05D002964 1.8e-51 206.1 131 85.5
Nitab4.5_0006124g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 1.8e-51 206.1 120 88.3
Lalb_Chr06g0161031 Lupinus albus HOM05D003818 ORTHO05D004541 2.4e-51 205.7 146 76.7
Hund27319 Selenicereus undatus HOM05D003818 ORTHO05D004541 3.1e-51 205.3 144 79.2
THA.LOC104819386 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 7.0e-51 204.1 146 78.1
EL10Ac1g00990 Beta vulgaris HOM05D003818 ORTHO05D004541 9.1e-51 203.8 144 76.4
AUR62004298 Chenopodium quinoa HOM05D003818 ORTHO05D004541 9.1e-51 203.8 144 75.7
AUR62022747 Chenopodium quinoa HOM05D003818 ORTHO05D004541 2.0e-50 202.6 144 75.0
Haze_20202 Corylus avellana HOM05D003818 ORTHO05D004541 2.0e-50 202.6 139 82.0
ECA247G1139 Erigeron canadensis HOM05D003818 ORTHO05D004541 2.0e-50 202.6 143 78.3
Carub.0003s2626 Capsella rubella HOM05D003818 ORTHO05D004541 2.7e-50 202.2 147 76.9
THA.LOC104818368 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 2.7e-50 202.2 147 76.9
Atru.chr1.512 Acer truncatum HOM05D003818 ORTHO05D004541 3.5e-50 201.8 149 76.5
Aa31LG9G1570 Aethionema arabicum HOM05D003818 ORTHO05D004541 3.5e-50 201.8 145 75.9
AL8G26260 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 3.5e-50 201.8 147 76.9
AT5G51940 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 3.5e-50 201.8 147 77.6
Hma1.2p1_0270F.1_g108370 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 3.5e-50 201.8 132 80.3
Lsat_1_v5_gn_3_64081 Lactuca sativa HOM05D003818 ORTHO05D004541 5.9e-50 201.1 143 74.1
vmacro16312 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 5.9e-50 201.1 169 68.0
AL3G42280 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 7.7e-50 200.7 145 75.2
Os07g0463100 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 7.7e-50 200.7 142 77.5
BcaB06g27416 Brassica carinata HOM05D003818 ORTHO05D004541 1.0e-49 200.3 147 75.5
BraA04t16951Z Brassica rapa HOM05D003818 ORTHO05D004541 1.0e-49 200.3 147 76.2
CARHR264880 Cardamine hirsuta HOM05D003818 ORTHO05D004541 1.0e-49 200.3 147 75.5
BcaC04g23878 Brassica carinata HOM05D003818 ORTHO05D004541 1.3e-49 199.9 145 75.2
A09p03630 Brassica napus HOM05D003818 ORTHO05D004541 1.3e-49 199.9 145 75.2
C09p03860 Brassica napus HOM05D003818 ORTHO05D004541 1.3e-49 199.9 145 75.2
BolC9t53311H Brassica oleracea HOM05D003818 ORTHO05D004541 1.3e-49 199.9 145 75.2
BraA09t36001Z Brassica rapa HOM05D003818 ORTHO05D004541 1.3e-49 199.9 145 75.2
Duzib084G1211 Durio zibethinus HOM05D003818 ORTHO05D004541 1.3e-49 199.9 145 76.6
BcaB04g19460 Brassica carinata HOM05D003818 ORTHO05D004541 2.2e-49 199.1 145 75.2
BolC4t26244H Brassica oleracea HOM05D003818 ORTHO05D004541 2.9e-49 198.7 147 75.5
Carub.0008s1203 Capsella rubella HOM05D003818 ORTHO05D004541 2.9e-49 198.7 147 75.5
Thhalv10027983m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 2.9e-49 198.7 147 74.8
AT2G04630 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 3.8e-49 198.4 147 76.2
Sp7g01990 Schrenkiella parvula HOM05D003818 ORTHO05D004541 3.8e-49 198.4 147 75.5
unitig_0.g2487 Utricularia gibba HOM05D003818 ORTHO05D004541 3.8e-49 198.4 141 75.2
A04p12880 Brassica napus HOM05D003818 ORTHO05D004541 8.5e-49 197.2 147 74.1
Thhalv10005087m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 8.5e-49 197.2 147 75.5
Thecc.03G171400 Theobroma cacao HOM05D003818 ORTHO05D004541 8.5e-49 197.2 144 75.7
C04p46580 Brassica napus HOM05D003818 ORTHO05D004541 1.1e-48 196.8 147 74.1
Sp2g17150 Schrenkiella parvula HOM05D003818 ORTHO05D004541 1.5e-48 196.4 147 75.5
SEGI_10630 Sequoiadendron giganteum HOM05D003818 ORTHO05D004541 3.2e-48 195.3 150 74.7
COL.COLO4_14270 Corchorus olitorius HOM05D003818 ORTHO05D004541 4.2e-48 194.9 130 82.3
CDE06G2832 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 9.4e-48 193.7 144 75.7
Ciclev10006171m.g Citrus clementina HOM05D003818 ORTHO05D004541 1.2e-47 193.4 144 75.0
CsaV3_3G046320 Cucumis sativus L. HOM05D003818 ORTHO05D004541 2.1e-47 192.6 142 76.1
ClCG05G007860 Citrullus lanatus HOM05D003818 ORTHO05D004541 4.7e-47 191.4 170 66.5
PSO478G0785 Papaver somniferum HOM05D003818 ORTHO05D004541 4.7e-47 191.4 144 73.6
PSO675G1382 Papaver somniferum HOM05D003818 ORTHO05D004541 4.7e-47 191.4 144 73.6
PSO782G3144 Papaver somniferum HOM05D003818 ORTHO05D004541 4.7e-47 191.4 144 73.6
SalBow5G5531 Salvia bowleyana HOM05D003818 ORTHO05D004541 8.0e-47 190.7 123 82.9
Gohir.A08G082700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 1.0e-46 190.3 145 74.5
Gohir.D08G112900 Gossypium hirsutum HOM05D003818 ORTHO05D004541 1.0e-46 190.3 147 76.2
Gorai.004G121300 Gossypium raimondii HOM05D003818 ORTHO05D004541 1.0e-46 190.3 147 76.2
DCAR_009510 Daucus carota HOM05D000059 ORTHO05D000128 2.3e-46 189.1 94 97.9
PSO541G1664 Papaver somniferum HOM05D003818 ORTHO05D004541 4.0e-46 188.3 143 72.7
Atru.chr3.2134 Acer truncatum HOM05D003818 ORTHO05D004541 5.2e-46 188.0 144 72.9
Aqoxy7G00432 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 1.2e-45 186.8 144 75.0
CAN.G97.6 Capsicum annuum HOM05D003818 ORTHO05D004541 4.4e-45 184.9 109 88.1
Aqoxy6G01685 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 7.5e-45 184.1 134 76.1
vmacro06714 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 2.2e-44 182.6 133 76.7
Pp3c16_17050 Physcomitrium patens HOM05D003818 ORTHO05D004541 1.8e-43 179.5 145 70.3
CDE02G0031 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 3.1e-43 178.7 143 71.3
Mapoly0001s0266 Marchantia polymorpha HOM05D003818 ORTHO05D004541 7.0e-43 177.6 144 70.8
SMO200G0145 Selaginella moellendorffii HOM05D003818 ORTHO05D004541 1.6e-42 176.4 95 89.5
Sc23g0003230 Simmondsia chinensis HOM05D003818 ORTHO05D004541 4.5e-42 174.9 132 75.0
TAR375G0179 Trochodendron aralioides HOM05D003818 ORTHO05D004541 4.5e-42 174.9 116 82.8
Gohir.D12G260866 Gossypium hirsutum HOM05D003818 ORTHO05D004541 2.3e-41 172.6 133 73.7
Oeu021768.1 Olea europaea HOM05D003818 ORTHO05D004541 2.9e-41 172.2 121 78.5
AagrBONN_evm.TU.Sc2ySwM_344.4289 Anthoceros agrestis HOM05D003818 ORTHO05D004541 4.7e-39 164.9 133 67.7
Zm00001eb049200 Zea mays HOM05D003818 ORTHO05D004541 4.7e-39 164.9 121 79.3
Nitab4.5_0002113g0140 Nicotiana tabacum HOM05D003818 ORTHO05D004541 6.1e-39 164.5 104 85.6
CANSAT56G1911 Cannabis sativa HOM05D003818 ORTHO05D004541 8.0e-39 164.1 120 76.7
MD09G1242800 Malus domestica HOM05D003818 ORTHO05D004541 1.0e-38 163.7 91 87.9
CBR_g31915 Chara braunii HOM05D003818 ORTHO05D004541 4.0e-38 161.8 131 65.6
Oeu021769.1 Olea europaea HOM05D003818 ORTHO05D004541 2.6e-37 159.1 97 87.6
Nitab4.5_0002077g0060 Nicotiana tabacum HOM05D003818 ORTHO05D004541 1.7e-36 156.4 142 62.0
SalBow8G3306 Salvia bowleyana HOM05D003818 ORTHO05D004541 5.4e-35 151.4 118 70.3
SalBow8G5018 Salvia bowleyana HOM05D003818 ORTHO05D004541 5.4e-35 151.4 118 70.3
Haze_09431 Corylus avellana HOM05D003818 ORTHO05D004541 8.6e-33 144.1 133 66.2
MCO13G124 Micromonas commoda HOM05D003818 ORTHO05D004541 4.3e-32 141.7 82 81.7
Cre01.g002200 Chlamydomonas reinhardtii HOM05D003818 ORTHO05D004541 3.0e-30 135.6 136 60.3
arahy.Tifrunner.gnm1.ann1.36XVJD Arachis hypogaea HOM05D003818 ORTHO05D004541 3.4e-29 132.1 112 67.9
PRCOL_00007084 Prasinoderma coloniale HOM05D003818 ORTHO05D004541 1.3e-28 130.2 134 58.2
MELO3C003707.2 Cucumis melo HOM05D003818 ORTHO05D004541 2.4e-27 125.9 142 55.6
Haze_26305 Corylus avellana HOM05D003818 ORTHO05D004541 6.0e-26 121.3 69 82.6
VMungo0647G2358 Vigna mungo HOM05D003818 ORTHO05D004541 7.8e-26 120.9 104 71.2
Prupe.7G013200 Prunus persica HOM05D003818 ORTHO05D004541 1.3e-25 120.2 99 72.7
TAR374G0228 Trochodendron aralioides HOM05D003818 ORTHO05D004541 3.0e-25 119.0 64 89.1
arahy.Tifrunner.gnm1.ann1.99YBLU Arachis hypogaea HOM05D003818 ORTHO05D004541 7.5e-21 104.4 132 47.7
arahy.Tifrunner.gnm1.ann1.28837M Arachis hypogaea HOM05D003818 ORTHO05D004541 9.8e-21 104.0 132 47.7
AagrBONN_evm.TU.Sc2ySwM_344.4292 Anthoceros agrestis HOM05D003818 ORTHO05D004541 1.7e-20 103.2 88 63.6
arahy.Tifrunner.gnm1.ann1.TF2L72 Arachis hypogaea HOM05D003818 ORTHO05D004541 7.0e-19 97.8 84 70.2
Os08g0426000 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D295196 2.1e-18 96.3 76 73.7
arahy.Tifrunner.gnm1.ann1.VWKV4W Arachis hypogaea HOM05D003818 ORTHO05D004541 7.8e-18 94.4 83 69.9
arahy.Tifrunner.gnm1.ann1.FSRU1U Arachis hypogaea HOM05D003818 ORTHO05D004541 1.3e-17 93.6 82 70.7
Actinidia03108 Actinidia chinensis HOM05D003818 ORTHO05D054983 2.3e-17 92.8 45 91.1
PGR142G2678 Punica granatum HOM05D003818 ORTHO05D004541 1.5e-16 90.1 83 65.1
arahy.Tifrunner.gnm1.ann1.VXTW3V Arachis hypogaea HOM05D003818 ORTHO05D013217 2.3e-09 66.2 35 94.3
DCAR_013632 Daucus carota HOM05D003818 ORTHO05D175173 6.6e-09 64.7 80 48.8


User provided reference genes

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