Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold58G20406 Striga asiatica HOM05D006341 ORTHO05D000377 7.2e-286 986.5 477 100.0
Migut.B00102 Erythranthe guttata HOM05D006341 ORTHO05D000377 2.0e-203 712.6 487 72.9
MSTRG.16892 Avicennia marina HOM05D006341 ORTHO05D000377 2.3e-199 699.1 498 71.3
SalBow1G4312 Salvia bowleyana HOM05D006341 ORTHO05D000377 5.1e-199 698.0 497 68.6
Oeu006673.1 Olea europaea HOM05D006341 ORTHO05D000377 2.0e-190 669.5 500 66.8
Dinv04950 Davidia involucrata HOM05D006341 ORTHO05D000377 1.6e-179 633.3 501 63.1
Ciclev10028267m.g Citrus clementina HOM05D006341 ORTHO05D000377 2.7e-176 622.5 497 61.6
Prupe.8G162700 Prunus persica HOM05D006341 ORTHO05D000377 2.7e-176 622.5 493 63.9
Atru.chr5.3271 Acer truncatum HOM05D006341 ORTHO05D000377 2.0e-174 616.3 490 62.9
CAN.G134.236 Capsicum annuum HOM05D006341 ORTHO05D000377 2.2e-173 612.8 490 62.9
FvH4_2g01620 Fragaria vesca HOM05D006341 ORTHO05D000377 2.8e-173 612.5 493 61.7
Solyc01g098460.4 Solanum lycopersicum HOM05D006341 ORTHO05D000377 2.8e-173 612.5 496 62.5
Sopen01g042030 Solanum pennellii HOM05D006341 ORTHO05D000377 4.8e-173 611.7 496 62.1
Hma1.2p1_0032F.1_g019570 Hydrangea macrophylla HOM05D006341 ORTHO05D000377 1.1e-172 610.5 500 60.4
MD05G1118100 Malus domestica HOM05D006341 ORTHO05D000377 1.1e-172 610.5 489 60.9
Thecc.02G064100 Theobroma cacao HOM05D006341 ORTHO05D000377 1.4e-172 610.1 486 63.2
CSS0004411 Camellia sinensis var. sinensis HOM05D006341 ORTHO05D000377 1.8e-172 609.8 500 61.8
Cc06_g16120 Coffea canephora HOM05D006341 ORTHO05D000377 2.4e-172 609.4 499 61.7
Duzib132G0346 Durio zibethinus HOM05D006341 ORTHO05D000377 4.1e-172 608.6 486 61.9
unitig_60.g25823 Utricularia gibba HOM05D006341 ORTHO05D000377 4.1e-172 608.6 478 63.0
Actinidia00608 Actinidia chinensis HOM05D006341 ORTHO05D000377 5.9e-171 604.7 473 64.3
CANSAT25G3024 Cannabis sativa HOM05D006341 ORTHO05D000377 7.7e-171 604.4 490 60.6
RcHm_v2.0_Chr6g0244441 Rosa chinensis HOM05D006341 ORTHO05D000377 1.0e-170 604.0 489 61.1
Peaxi162Scf00434g00625 Petunia axillaris HOM05D006341 ORTHO05D000377 1.3e-170 603.6 496 61.5
RcHm_v2.0_Chr6g0244411 Rosa chinensis HOM05D006341 ORTHO05D000377 1.3e-170 603.6 491 60.7
Nn7g37263 Nelumbo nucifera HOM05D006341 ORTHO05D000377 2.5e-169 599.4 492 60.8
Haze_02174 Corylus avellana HOM05D006341 ORTHO05D000377 5.5e-169 598.2 480 60.2
Haze_02181 Corylus avellana HOM05D006341 ORTHO05D000377 1.2e-168 597.0 480 60.2
Potri.004G172100 Populus trichocarpa HOM05D006341 ORTHO05D000377 6.1e-168 594.7 501 59.9
Sabra04G0114400 Salix brachista HOM05D006341 ORTHO05D000377 6.1e-168 594.7 506 59.5
TPR.G31245 Trifolium pratense HOM05D006341 ORTHO05D000377 6.1e-168 594.7 503 59.4
CsaV3_7G000880 Cucumis sativus L. HOM05D006341 ORTHO05D000377 8.0e-168 594.3 493 60.2
Gohir.A12G038400 Gossypium hirsutum HOM05D006341 ORTHO05D000377 8.0e-168 594.3 486 61.1
PGR042G0052 Punica granatum HOM05D006341 ORTHO05D000377 1.0e-167 594.0 474 62.4
QL11p049167 Quercus lobata HOM05D006341 ORTHO05D000377 1.4e-167 593.6 482 60.4
TWI53G1223 Tripterygium wilfordii HOM05D006341 ORTHO05D000377 1.8e-167 593.2 501 60.1
Manes.11G082657 Manihot esculenta HOM05D006341 ORTHO05D000377 4.0e-167 592.0 492 61.0
COL.COLO4_17298 Corchorus olitorius HOM05D006341 ORTHO05D000377 5.2e-167 591.7 486 60.3
Psat7g085760 Pisum sativum HOM05D006341 ORTHO05D000377 6.8e-167 591.3 491 59.7
Lj4g0012983 Lotus japonicus HOM05D006341 ORTHO05D000377 1.5e-166 590.1 493 59.8
Gorai.008G034900 Gossypium raimondii HOM05D006341 ORTHO05D000377 3.4e-166 589.0 486 60.7
TAR381G0106 Trochodendron aralioides HOM05D006341 ORTHO05D000377 5.7e-166 588.2 496 58.9
Nitab4.5_0001423g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 9.8e-166 587.4 488 61.1
Lsat_1_v5_gn_8_124961 Lactuca sativa HOM05D006341 ORTHO05D000377 1.7e-165 586.6 474 60.1
Gohir.D12G033900 Gossypium hirsutum HOM05D006341 ORTHO05D000377 2.2e-165 586.3 486 60.3
vmacro02264 Vaccinium macrocarpon HOM05D006341 ORTHO05D000377 6.3e-165 584.7 540 57.6
Ca_18243_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 1.6e-163 580.1 474 59.7
COL.COLO4_17179 Corchorus olitorius HOM05D006341 ORTHO05D000377 2.0e-163 579.7 462 60.8
Aqoxy5G01641 Aquilegia oxysepala HOM05D006341 ORTHO05D000377 2.7e-163 579.3 484 59.3
HanXRQChr17g0553851 Helianthus annuus HOM05D006341 ORTHO05D000377 9.5e-161 570.9 470 61.1
Atru.chr5.3277 Acer truncatum HOM05D006341 ORTHO05D000377 2.1e-160 569.7 478 61.1
FAN20G2467 Fragaria x ananassa HOM05D006341 ORTHO05D000377 2.1e-160 569.7 449 64.6
FAN24G0408 Fragaria x ananassa HOM05D006341 ORTHO05D000377 2.8e-160 569.3 449 62.8
Lj5A183G92 Lonicera japonica HOM05D006341 ORTHO05D000377 2.8e-160 569.3 463 62.4
Hund06416 Selenicereus undatus HOM05D006341 ORTHO05D000377 3.6e-160 568.9 516 56.6
Sc08g0003080 Simmondsia chinensis HOM05D006341 ORTHO05D000377 1.0e-159 567.4 513 56.7
Nitab4.5_0001903g0070 Nicotiana tabacum HOM05D006341 ORTHO05D000377 8.9e-159 564.3 422 65.9
MBI02_g27965_MAGBIO Magnolia biondii HOM05D006341 ORTHO05D000377 5.7e-158 561.6 478 59.8
Carub.0003s3491 Capsella rubella HOM05D006341 ORTHO05D000377 1.8e-156 556.6 485 58.1
arahy.Tifrunner.gnm1.ann1.MR7L4V Arachis hypogaea HOM05D006341 ORTHO05D000377 3.2e-156 555.8 493 56.6
EL10Ac9g21414 Beta vulgaris HOM05D006341 ORTHO05D000377 4.1e-156 555.4 518 55.8
BraA04t17219Z Brassica rapa HOM05D006341 ORTHO05D000377 4.1e-156 555.4 469 58.8
Dinv39489 Davidia involucrata HOM05D006341 ORTHO05D000377 7.0e-156 554.7 475 59.6
Aa31LG7G15600 Aethionema arabicum HOM05D006341 ORTHO05D000377 9.2e-156 554.3 474 58.6
arahy.Tifrunner.gnm1.ann1.UN7M5W Arachis hypogaea HOM05D006341 ORTHO05D000377 1.2e-155 553.9 490 56.7
THA.LOC104807791 Tarenaya hassleriana HOM05D006341 ORTHO05D000377 1.2e-155 553.9 494 56.3
CARHR111910 Cardamine hirsuta HOM05D006341 ORTHO05D000377 3.5e-155 552.4 483 58.4
Sp4g00210 Schrenkiella parvula HOM05D006341 ORTHO05D000377 3.5e-155 552.4 493 57.8
AL4G10160 Arabidopsis lyrata HOM05D006341 ORTHO05D000377 5.9e-155 551.6 479 57.2
BcaB06g27766 Brassica carinata HOM05D006341 ORTHO05D000377 7.8e-155 551.2 469 58.4
AT2G21070 Arabidopsis thaliana HOM05D006341 ORTHO05D000377 2.3e-154 549.7 482 57.3
Thhalv10000146m.g Eutrema salsugineum HOM05D006341 ORTHO05D000377 3.9e-154 548.9 493 56.2
C04p50300 Brassica napus HOM05D006341 ORTHO05D000377 5.0e-154 548.5 473 57.7
BolC4t26628H Brassica oleracea HOM05D006341 ORTHO05D000377 5.0e-154 548.5 473 57.7
A04p15870 Brassica napus HOM05D006341 ORTHO05D000377 8.6e-154 547.7 472 57.8
AUR62010072 Chenopodium quinoa HOM05D006341 ORTHO05D000377 8.6e-154 547.7 510 55.1
Glyma.08G087700 Glycine max HOM05D006341 ORTHO05D000377 1.2e-152 543.9 497 56.3
MELO3C013369.2 Cucumis melo HOM05D006341 ORTHO05D000377 1.6e-152 543.5 454 59.5
ECA233G1460 Erigeron canadensis HOM05D006341 ORTHO05D000377 2.1e-152 543.1 468 57.9
Glyma.05G133200 Glycine max HOM05D006341 ORTHO05D000377 6.2e-152 541.6 496 55.2
Os02g0121200 Oryza sativa ssp. japonica HOM05D006341 ORTHO05D000377 2.3e-151 539.7 475 57.1
CDE05G1540 Ceratophyllum demersum HOM05D006341 ORTHO05D000377 2.0e-150 536.6 508 54.3
Lalb_Chr13g0293551 Lupinus albus HOM05D006341 ORTHO05D000377 3.7e-149 532.3 523 51.6
Rhsim11G0190600 Rhododendron simsii HOM05D006341 ORTHO05D000377 1.1e-148 530.8 507 55.6
ClCG02G004230 Citrullus lanatus HOM05D006341 ORTHO05D000377 4.1e-148 528.9 506 55.5
Eucgr.G01768 Eucalyptus grandis HOM05D006341 ORTHO05D000377 2.7e-147 526.2 502 54.4
Sed0009186 Sechium edule HOM05D006341 ORTHO05D000377 3.5e-147 525.8 459 57.3
GSVIVG01024058001 Vitis vinifera HOM05D006341 ORTHO05D000377 6.6e-146 521.5 474 57.6
VMungo0251G3227 Vigna mungo HOM05D006341 ORTHO05D000377 8.6e-146 521.2 454 57.9
HPP92_014019 Vanilla planifolia HOM05D006341 ORTHO05D000377 2.8e-144 516.2 494 54.0
ATR0810G159 Amborella trichopoda HOM05D006341 ORTHO05D000377 8.9e-143 511.1 514 52.1
Ah.01g008830 Amaranthus hybridus HOM05D006341 ORTHO05D000377 3.2e-140 502.7 480 55.6
SHI05717 Sapria himalayana HOM05D006341 ORTHO05D000377 1.5e-137 493.8 487 52.2
SEGI_13829 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 1.2e-134 484.2 517 51.6
SEGI_22420 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 1.2e-134 484.2 517 51.6
Phvul.002G189600 Phaseolus vulgaris HOM05D006341 ORTHO05D000377 1.7e-130 470.3 477 53.0
AagrBONN_evm.TU.Sc2ySwM_228.2682 Anthoceros agrestis HOM05D006341 ORTHO05D000377 4.2e-124 449.1 479 49.1
QL11p048584 Quercus lobata HOM05D006341 ORTHO05D000377 1.7e-122 443.7 437 53.1
Potri.009G131700 Populus trichocarpa HOM05D006341 ORTHO05D000377 6.9e-119 431.8 310 66.5
Pp3c8_21040 Physcomitrium patens HOM05D006341 ORTHO05D000377 6.4e-117 425.2 550 43.5
Zm00001eb208320 Zea mays HOM05D006341 ORTHO05D000377 2.1e-115 420.2 391 55.5
Mapoly0085s0033 Marchantia polymorpha HOM05D006341 ORTHO05D000377 5.1e-114 415.6 558 42.3
Cpa.g.sc37.173 Carica papaya HOM05D006341 ORTHO05D000377 6.7e-114 415.2 467 50.1
SMO169G0079 Selaginella moellendorffii HOM05D006341 ORTHO05D000377 4.2e-108 396.0 439 48.1
Ca_18241_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 1.3e-106 391.0 416 49.5
Nitab4.5_0008354g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 8.4e-101 371.7 322 60.2
Atru.chr5.3221 Acer truncatum HOM05D006341 ORTHO05D000377 7.9e-99 365.2 276 65.9
CiPaw.06G124100 Carya illinoinensis HOM05D006341 ORTHO05D000377 1.2e-91 341.3 353 51.8
Carub.0004s0010 Capsella rubella HOM05D006341 ORTHO05D000377 8.7e-90 335.1 489 41.3
FAN22G0308 Fragaria x ananassa HOM05D003409 ORTHO05D004015 9.4e-76 288.5 284 53.9
MCO01G168 Micromonas commoda HOM05D006341 ORTHO05D000377 1.4e-63 248.1 333 40.2
PGSC0003DMG401028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 4.1e-63 246.5 143 78.3
Sabra09G0102100 Salix brachista HOM05D006341 ORTHO05D000377 4.2e-60 236.5 305 45.6
Cre01.g044150 Chlamydomonas reinhardtii HOM05D006341 ORTHO05D000377 1.4e-58 231.5 397 34.0
CBR_g23939 Chara braunii HOM05D006341 ORTHO05D000377 6.8e-50 202.6 824 23.9
PRCOL_00006207 Prasinoderma coloniale HOM05D006341 ORTHO05D000377 5.4e-39 166.4 346 32.4
PGSC0003DMG402028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 3.1e-34 150.6 141 56.0
FAN07G1625 Fragaria x ananassa HOM05D006341 ORTHO05D000377 3.5e-30 137.1 98 69.4
Actinidia20497 Actinidia chinensis HOM05D006341 ORTHO05D000377 7.3e-28 129.4 77 76.6
Oeu063293.1 Olea europaea HOM05D006341 ORTHO05D000377 1.6e-27 128.3 136 51.5
FAN07G2354 Fragaria x ananassa HOM05D006341 ORTHO05D000377 4.0e-18 97.1 137 39.4
Atru.chr5.3222 Acer truncatum HOM05D006341 ORTHO05D000377 2.4e-07 61.2 52 59.6


User provided reference genes

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