Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold57G20185 Striga asiatica HOM05D006620 ORTHO05D008921 1.9e-286 988.4 478 100.0
SalBow2G2385 Salvia bowleyana HOM05D006620 ORTHO05D008921 1.5e-243 845.9 459 87.6
Oeu024839.2 Olea europaea HOM05D006620 ORTHO05D008921 3.2e-241 838.2 455 87.5
Migut.G00599 Erythranthe guttata HOM05D006620 ORTHO05D008921 4.8e-237 824.3 465 86.2
Manes.15G048100 Manihot esculenta HOM05D006620 ORTHO05D008921 1.6e-232 809.3 451 85.4
Actinidia25091 Actinidia chinensis HOM05D006620 ORTHO05D008921 7.9e-232 807.0 459 85.0
Cc03_g07000 Coffea canephora HOM05D006620 ORTHO05D008921 3.0e-231 805.1 447 85.5
GSVIVG01028992001 Vitis vinifera HOM05D006620 ORTHO05D008921 1.5e-230 802.7 448 85.5
TAR365G0583 Trochodendron aralioides HOM05D006620 ORTHO05D008921 3.3e-230 801.6 430 87.2
Dinv29777 Davidia involucrata HOM05D006620 ORTHO05D008921 1.6e-229 799.3 428 87.4
Atru.chr4.1848 Acer truncatum HOM05D006620 ORTHO05D008921 2.1e-229 798.9 454 83.0
Gohir.A10G119800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 2.1e-229 798.9 447 84.8
Gohir.D10G146800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 2.1e-229 798.9 436 86.2
Cpa.g.sc59.55 Carica papaya HOM05D006620 ORTHO05D008921 3.7e-229 798.1 447 85.2
unitig_899.g14858 Utricularia gibba HOM05D006620 ORTHO05D008921 6.2e-229 797.3 477 81.8
Ciclev10004924m.g Citrus clementina HOM05D006620 ORTHO05D008921 1.4e-228 796.2 436 85.8
Hma1.2p1_1241F.1_g269780 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 1.4e-228 796.2 430 87.0
CSS0026751 Camellia sinensis var. sinensis HOM05D006620 ORTHO05D008921 1.8e-228 795.8 431 87.2
CiPaw.02G103900 Carya illinoinensis HOM05D006620 ORTHO05D008921 2.4e-228 795.4 441 85.5
CsaV3_3G011480 Cucumis sativus L. HOM05D006620 ORTHO05D008921 2.4e-228 795.4 444 85.1
DCAR_002286 Daucus carota HOM05D006620 ORTHO05D008921 3.1e-228 795.0 477 80.1
Glyma.10G128400 Glycine max HOM05D006620 ORTHO05D008921 3.1e-228 795.0 450 82.4
QL06p022330 Quercus lobata HOM05D006620 ORTHO05D008921 3.1e-228 795.0 447 84.3
Thecc.04G218300 Theobroma cacao HOM05D006620 ORTHO05D008921 9.0e-228 793.5 452 83.4
CANSAT78G1778 Cannabis sativa HOM05D006620 ORTHO05D008921 1.2e-227 793.1 447 83.9
ClCG05G003790 Citrullus lanatus HOM05D006620 ORTHO05D008921 1.2e-227 793.1 437 85.4
Nn1g03061 Nelumbo nucifera HOM05D006620 ORTHO05D008921 1.2e-227 793.1 428 86.9
VMungo0720G1672 Vigna mungo HOM05D006620 ORTHO05D008921 1.2e-227 793.1 455 81.8
MELO3C006358.2 Cucumis melo HOM05D006620 ORTHO05D008921 2.0e-227 792.3 442 84.4
Duzib151G1212 Durio zibethinus HOM05D006620 ORTHO05D008921 2.6e-227 792.0 445 84.0
Sed0017900 Sechium edule HOM05D006620 ORTHO05D008921 4.5e-227 791.2 437 84.9
PGR142G1067 Punica granatum HOM05D006620 ORTHO05D008921 5.8e-227 790.8 429 86.7
CAN.G812.44 Capsicum annuum HOM05D006620 ORTHO05D008921 7.6e-227 790.4 457 82.1
Lalb_Chr01g0011271 Lupinus albus HOM05D006620 ORTHO05D008921 1.0e-226 790.0 445 84.0
Phvul.007G238800 Phaseolus vulgaris HOM05D006620 ORTHO05D008921 2.9e-226 788.5 442 83.7
Lj6g0024353 Lotus japonicus HOM05D006620 ORTHO05D008921 6.5e-226 787.3 443 83.5
Sopen09g034080 Solanum pennellii HOM05D006620 ORTHO05D008921 6.5e-226 787.3 443 83.5
Prupe.1G054600 Prunus persica HOM05D006620 ORTHO05D008921 2.5e-225 785.4 459 81.9
Medtr1g046250 Medicago truncatula HOM05D006620 ORTHO05D008921 9.3e-225 783.5 443 82.2
TPR.G24008 Trifolium pratense HOM05D006620 ORTHO05D008921 9.3e-225 783.5 443 83.3
Potri.010G062300 Populus trichocarpa HOM05D006620 ORTHO05D008921 1.2e-224 783.1 448 82.6
RcHm_v2.0_Chr4g0396281 Rosa chinensis HOM05D006620 ORTHO05D008921 1.6e-224 782.7 431 84.9
PSO764G0126 Papaver somniferum HOM05D006620 ORTHO05D008921 2.7e-224 781.9 429 85.3
Lsat_1_v5_gn_6_61660 Lactuca sativa HOM05D006620 ORTHO05D008921 3.5e-224 781.6 431 84.7
Aqoxy5G00083 Aquilegia oxysepala HOM05D006620 ORTHO05D008921 6.0e-224 780.8 464 78.2
arahy.Tifrunner.gnm1.ann1.8GH2US Arachis hypogaea HOM05D006620 ORTHO05D008921 7.9e-224 780.4 433 83.8
Gorai.011G164100 Gossypium raimondii HOM05D006620 ORTHO05D008921 7.9e-224 780.4 449 83.3
HanXRQChr07g0185841 Helianthus annuus HOM05D006620 ORTHO05D008921 1.0e-223 780.0 445 82.5
THA.LOC104801056 Tarenaya hassleriana HOM05D006620 ORTHO05D008921 1.0e-223 780.0 450 81.3
MD13G1227100 Malus domestica HOM05D006620 ORTHO05D008921 1.8e-223 779.2 446 83.6
TWI53G1958 Tripterygium wilfordii HOM05D006620 ORTHO05D008921 7.4e-222 773.9 466 79.0
Carub.0001s0385 Capsella rubella HOM05D006620 ORTHO05D008921 1.6e-221 772.7 449 81.1
arahy.Tifrunner.gnm1.ann1.68MQ8I Arachis hypogaea HOM05D006620 ORTHO05D008921 2.1e-221 772.3 470 78.9
FvH4_4g05310 Fragaria vesca HOM05D006620 ORTHO05D008921 2.1e-221 772.3 429 84.1
FAN17G2880 Fragaria x ananassa HOM05D006620 ORTHO05D008921 6.2e-221 770.8 431 83.8
AT1G04620 Arabidopsis thaliana HOM05D006620 ORTHO05D008921 8.2e-221 770.4 442 81.9
FAN12G0711 Fragaria x ananassa HOM05D006620 ORTHO05D008921 1.1e-220 770.0 432 83.8
CARHR003970 Cardamine hirsuta HOM05D006620 ORTHO05D008921 1.2e-219 766.5 430 82.6
Thhalv10007576m.g Eutrema salsugineum HOM05D006620 ORTHO05D008921 1.2e-219 766.5 442 81.0
AL1G14300 Arabidopsis lyrata HOM05D006620 ORTHO05D008921 1.5e-219 766.1 449 80.0
PSO832G4215 Papaver somniferum HOM05D006620 ORTHO05D008921 1.5e-219 766.1 433 83.4
Sp1g03450 Schrenkiella parvula HOM05D006620 ORTHO05D008921 2.0e-219 765.8 477 77.1
ECA233G0386 Erigeron canadensis HOM05D006620 ORTHO05D008921 7.6e-219 763.8 414 85.5
ATR0787G041 Amborella trichopoda HOM05D006620 ORTHO05D008921 1.0e-218 763.5 459 78.9
SpUn0217_0010 Schrenkiella parvula HOM05D006620 ORTHO05D008921 1.0e-218 763.5 440 81.1
HPP92_009009 Vanilla planifolia HOM05D006620 ORTHO05D008921 1.9e-217 759.2 437 82.2
A10p03050 Brassica napus HOM05D006620 ORTHO05D008921 2.5e-217 758.8 429 81.8
C05p02810 Brassica napus HOM05D006620 ORTHO05D008921 3.2e-217 758.4 429 81.6
FAN07G1877 Fragaria x ananassa HOM05D006620 ORTHO05D008921 3.2e-217 758.4 427 83.4
BolC5t29064H Brassica oleracea HOM05D006620 ORTHO05D008921 5.5e-217 757.7 441 80.0
BraA10t42578Z Brassica rapa HOM05D006620 ORTHO05D008921 5.5e-217 757.7 442 80.1
CDE09G0604 Ceratophyllum demersum HOM05D006620 ORTHO05D008921 3.0e-215 751.9 417 83.5
Lj3A630T51 Lonicera japonica HOM05D006620 ORTHO05D008921 4.3e-214 748.0 444 81.1
AUR62043860 Chenopodium quinoa HOM05D006620 ORTHO05D008921 5.7e-214 747.7 436 80.5
SEGI_36405 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 2.0e-211 739.2 431 80.3
Zm00001eb038650 Zea mays HOM05D006620 ORTHO05D008921 2.6e-211 738.8 421 81.5
COL.COLO4_34324 Corchorus olitorius HOM05D006620 ORTHO05D008921 7.7e-211 737.3 450 78.9
Hund19263 Selenicereus undatus HOM05D006620 ORTHO05D008921 2.2e-210 735.7 435 80.9
Ah.04g153440 Amaranthus hybridus HOM05D006620 ORTHO05D008921 7.2e-209 730.7 429 80.0
AagrBONN_evm.TU.Sc2ySwM_228.367 Anthoceros agrestis HOM05D006620 ORTHO05D008921 1.6e-208 729.6 427 79.2
Peaxi162Scf00125g00710 Petunia axillaris HOM05D006620 ORTHO05D008921 3.6e-208 728.4 401 85.3
Pp3c2_21860 Physcomitrium patens HOM05D006620 ORTHO05D008921 2.3e-207 725.7 439 77.7
MBI07_g21064_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D008921 6.3e-205 717.6 401 83.8
vmacro00524 Vaccinium macrocarpon HOM05D006620 ORTHO05D008921 3.1e-204 715.3 529 69.2
Mapoly0088s0008 Marchantia polymorpha HOM05D006620 ORTHO05D008921 5.3e-204 714.5 466 72.1
Rhsim09G0044600 Rhododendron simsii HOM05D006620 ORTHO05D008921 2.1e-200 702.6 445 77.3
AUR62035902 Chenopodium quinoa HOM05D006620 ORTHO05D008921 3.9e-199 698.4 435 77.0
FAN22G0814 Fragaria x ananassa HOM05D006620 ORTHO05D008921 7.4e-198 694.1 475 72.2
Nitab4.5_0003287g0030 Nicotiana tabacum HOM05D006620 ORTHO05D008921 7.4e-198 694.1 485 71.5
Solyc09g091100.4 Solanum lycopersicum HOM05D006620 ORTHO05D008921 5.3e-196 688.0 382 84.3
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 2.6e-195 685.6 567 63.3
Sc25g0004890 Simmondsia chinensis HOM05D006620 ORTHO05D008921 2.5e-193 679.1 378 83.6
Cfa014839 Carpinus fangiana HOM05D006620 ORTHO05D008921 4.4e-190 668.3 385 82.6
EL10Ac3g06742 Beta vulgaris HOM05D006620 ORTHO05D008921 5.3e-188 661.4 445 72.8
Aa31LG1G20250 Aethionema arabicum HOM05D006620 ORTHO05D008921 1.9e-185 652.9 387 80.1
CBR_g51515 Chara braunii HOM05D006620 ORTHO05D008921 2.5e-185 652.5 421 71.5
Glyma.20G079901 Glycine max HOM05D006620 ORTHO05D008921 2.4e-180 636.0 357 82.1
AUR62035337 Chenopodium quinoa HOM05D006620 ORTHO05D008921 8.5e-178 627.5 414 74.4
Cre11.g468700 Chlamydomonas reinhardtii HOM05D006620 ORTHO05D008921 4.3e-169 598.6 423 66.7
MCO15G577 Micromonas commoda HOM05D006620 ORTHO05D008921 4.0e-167 592.0 419 65.9
Ca_11784_v3 Cicer arietinum L. HOM05D006620 ORTHO05D008921 2.2e-165 586.3 377 74.5
Cc03_g06790 Coffea canephora HOM05D006620 ORTHO05D008921 2.0e-163 579.7 502 62.7
Psat6g109520 Pisum sativum HOM05D006620 ORTHO05D008921 7.8e-139 498.0 297 80.8
Haze_11525 Corylus avellana HOM05D006620 ORTHO05D008921 1.3e-138 497.3 268 86.6
Nitab4.5_0000451g0130 Nicotiana tabacum HOM05D006620 ORTHO05D008921 3.9e-138 495.7 455 57.6
PRCOL_00000047 Prasinoderma coloniale HOM05D006620 ORTHO05D008921 1.1e-135 487.6 374 62.0
Os04g0320100 Oryza sativa ssp. japonica HOM05D006620 ORTHO05D008921 1.4e-135 487.3 271 84.1
Eucgr.H00112 Eucalyptus grandis HOM05D006620 ORTHO05D008921 2.2e-117 426.8 263 79.5
PGSC0003DMG401011586 Solanum tuberosum HOM05D006620 ORTHO05D008921 1.5e-65 254.6 147 76.2
Prupe.1G054400 Prunus persica HOM05D006620 ORTHO05D008921 3.7e-64 250.0 190 67.4
SEGI_09547 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 1.6e-62 244.6 147 77.6
Hma1.2p1_1241F.1_g269765 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 1.7e-40 171.4 94 81.9
SEGI_19589 Sequoiadendron giganteum HOM05D006620 ORTHO05D025789 6.2e-27 126.3 81 70.4
Actinidia35928 Actinidia chinensis HOM05D006620 ORTHO05D000073 4.0e-26 123.6 70 81.4
Ca_17765_v3 Cicer arietinum L. HOM05D006620 ORTHO05D044367 2.1e-19 101.3 57 80.7
COL.COLO4_07239 Corchorus olitorius HOM05D006620 ORTHO05D044367 4.4e-17 93.6 49 89.8
MBI11_g39495_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 2.8e-11 74.3 98 44.9
MBI15_g44046_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 3.1e-10 70.9 42 71.4
MBI12_g00604_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 5.3e-10 70.1 42 69.0
MELO3C028457.2 Cucumis melo HOM05D006620 ORTHO05D167913 8.4e-08 62.8 40 77.5


User provided reference genes

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