Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold566G52950 Striga asiatica HOM05D006204 ORTHO05D007851 7.0e-287 989.9 507 100.0
MSTRG.18500 Avicennia marina HOM05D006204 ORTHO05D007851 9.3e-191 670.6 478 70.9
SalBow6G6469 Salvia bowleyana HOM05D006204 ORTHO05D007851 6.3e-187 657.9 493 69.4
Migut.D00744 Erythranthe guttata HOM05D006204 ORTHO05D007851 2.0e-180 636.3 495 66.9
Oeu051516.1 Olea europaea HOM05D006204 ORTHO05D007851 4.7e-174 615.1 433 69.5
Cc01_g16040 Coffea canephora HOM05D006204 ORTHO05D007851 2.5e-159 566.2 414 67.4
CSS0007769 Camellia sinensis var. sinensis HOM05D006204 ORTHO05D007851 1.5e-156 557.0 438 65.3
Dinv10448 Davidia involucrata HOM05D006204 ORTHO05D007851 2.6e-156 556.2 432 65.3
Nitab4.5_0002518g0020 Nicotiana tabacum HOM05D006204 ORTHO05D007851 4.4e-156 555.4 489 58.1
Rhsim13G0053400 Rhododendron simsii HOM05D006204 ORTHO05D007851 3.7e-155 552.4 437 63.4
Peaxi162Scf00672g00017 Petunia axillaris HOM05D006204 ORTHO05D007851 6.3e-155 551.6 419 64.2
Lj2C1115T10 Lonicera japonica HOM05D006204 ORTHO05D007851 9.1e-154 547.7 414 66.4
Solyc09g055910.3 Solanum lycopersicum HOM05D006204 ORTHO05D007851 2.7e-153 546.2 493 57.2
Hma1.2p1_0161F.1_g071490 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 1.3e-152 543.9 408 66.4
Sopen09g021740 Solanum pennellii HOM05D006204 ORTHO05D007851 6.5e-152 541.6 492 56.9
Lsat_1_v5_gn_8_97700 Lactuca sativa HOM05D006204 ORTHO05D007851 4.2e-151 538.9 417 63.1
CAN.G120.6 Capsicum annuum HOM05D006204 ORTHO05D007851 3.6e-150 535.8 492 57.1
Cfa010629 Carpinus fangiana HOM05D006204 ORTHO05D007851 8.0e-150 534.6 423 62.9
PSO832G1370 Papaver somniferum HOM05D006204 ORTHO05D007851 1.5e-148 530.4 432 63.2
PSO210G2735 Papaver somniferum HOM05D006204 ORTHO05D007851 3.4e-148 529.3 432 62.7
Prupe.8G189100 Prunus persica HOM05D006204 ORTHO05D007851 1.7e-147 526.9 433 59.6
Nitab4.5_0000038g0330 Nicotiana tabacum HOM05D006204 ORTHO05D007851 2.2e-147 526.6 402 63.2
Cpa.g.sc8.59 Carica papaya HOM05D006204 ORTHO05D007851 2.8e-147 526.2 432 59.0
Cfa010628 Carpinus fangiana HOM05D006204 ORTHO05D007851 6.3e-147 525.0 422 61.6
unitig_736.g22899 Utricularia gibba HOM05D006204 ORTHO05D007851 1.1e-146 524.2 419 64.0
MD05G1157000 Malus domestica HOM05D006204 ORTHO05D007851 5.4e-146 521.9 456 58.3
TWI36G0048 Tripterygium wilfordii HOM05D006204 ORTHO05D007851 2.0e-145 520.0 480 57.1
Manes.12G059400 Manihot esculenta HOM05D006204 ORTHO05D007851 2.7e-145 519.6 423 60.0
Ciclev10015007m.g Citrus clementina HOM05D006204 ORTHO05D007851 1.5e-143 513.8 421 59.1
Potri.014G018300 Populus trichocarpa HOM05D006204 ORTHO05D007851 1.5e-143 513.8 416 59.1
BcaC06g30795 Brassica carinata HOM05D006204 ORTHO05D007851 2.5e-143 513.1 424 59.7
C07p39160 Brassica napus HOM05D006204 ORTHO05D007851 3.3e-143 512.7 448 57.8
CiPaw.13G058500 Carya illinoinensis HOM05D006204 ORTHO05D007851 5.5e-143 511.9 419 59.9
ECA236G0779 Erigeron canadensis HOM05D006204 ORTHO05D007851 7.2e-143 511.5 448 58.9
Gohir.D11G149400 Gossypium hirsutum HOM05D006204 ORTHO05D007851 7.2e-143 511.5 431 60.3
Duzib211G0163 Durio zibethinus HOM05D006204 ORTHO05D007851 9.5e-143 511.1 431 60.1
Sabra14G0135500 Salix brachista HOM05D006204 ORTHO05D007851 9.5e-143 511.1 421 58.9
A06p39170 Brassica napus HOM05D006204 ORTHO05D007851 1.2e-142 510.8 448 57.8
QL09p047023 Quercus lobata HOM05D006204 ORTHO05D007851 2.1e-142 510.0 432 59.7
Gorai.007G160200 Gossypium raimondii HOM05D006204 ORTHO05D007851 2.8e-142 509.6 433 59.8
FvH4_2g17671 Fragaria vesca HOM05D006204 ORTHO05D007851 6.1e-142 508.4 431 59.4
Carub.0008s0801 Capsella rubella HOM05D006204 ORTHO05D007851 2.3e-141 506.5 415 59.8
AL8G21270 Arabidopsis lyrata HOM05D006204 ORTHO05D007851 4.0e-141 505.8 458 56.6
FAN27G0099 Fragaria x ananassa HOM05D006204 ORTHO05D007851 4.0e-141 505.8 474 55.9
RcHm_v2.0_Chr6g0282641 Rosa chinensis HOM05D006204 ORTHO05D007851 5.2e-141 505.4 504 51.8
Potri.014G177300 Populus trichocarpa HOM05D006204 ORTHO05D007851 1.5e-140 503.8 416 58.4
Thecc.01G209900 Theobroma cacao HOM05D006204 ORTHO05D007851 1.5e-140 503.8 433 59.1
BolC7t44436H Brassica oleracea HOM05D006204 ORTHO05D007851 2.6e-140 503.1 462 56.1
BraA06t26832Z Brassica rapa HOM05D006204 ORTHO05D007851 2.6e-140 503.1 423 58.4
Prupe.8G189200 Prunus persica HOM05D006204 ORTHO05D007851 3.4e-140 502.7 439 57.4
AT5G48440 Arabidopsis thaliana HOM05D006204 ORTHO05D007851 4.4e-140 502.3 457 56.9
Sp2g18790 Schrenkiella parvula HOM05D006204 ORTHO05D007851 1.3e-139 500.7 447 56.6
Eucgr.H00714 Eucalyptus grandis HOM05D006204 ORTHO05D007851 3.7e-139 499.2 431 58.5
HanXRQChr09g0257591 Helianthus annuus HOM05D006204 ORTHO05D007851 4.9e-139 498.8 442 59.7
PGR083G1941 Punica granatum HOM05D006204 ORTHO05D007851 1.1e-138 497.7 447 57.7
Thhalv10004189m.g Eutrema salsugineum HOM05D006204 ORTHO05D007851 1.8e-138 496.9 429 57.8
Medtr7g051240 Medicago truncatula HOM05D006204 ORTHO05D007851 3.2e-138 496.1 421 57.5
CsaV3_7G027170 Cucumis sativus L. HOM05D006204 ORTHO05D007851 4.1e-138 495.7 449 56.3
Gohir.A11G143100 Gossypium hirsutum HOM05D006204 ORTHO05D007851 4.1e-138 495.7 431 59.2
Aa31sc661G10 Aethionema arabicum HOM05D006204 ORTHO05D007851 9.2e-138 494.6 471 54.4
TPR.G26855 Trifolium pratense HOM05D006204 ORTHO05D007851 1.6e-137 493.8 423 57.9
ClCG09G007900 Citrullus lanatus HOM05D006204 ORTHO05D007851 3.5e-137 492.7 513 51.3
Haze_03572 Corylus avellana HOM05D006204 ORTHO05D007851 5.9e-137 491.9 563 49.4
Lj1g0017122 Lotus japonicus HOM05D006204 ORTHO05D007851 7.8e-137 491.5 458 55.0
Aqoxy2G00207 Aquilegia oxysepala HOM05D006204 ORTHO05D007851 1.3e-136 490.7 421 57.5
HanXRQChr09g0257621 Helianthus annuus HOM05D006204 ORTHO05D007851 1.7e-136 490.3 393 62.6
AUR62008077 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.1e-135 487.6 416 56.2
FAN15G1742 Fragaria x ananassa HOM05D006204 ORTHO05D007851 2.5e-135 486.5 451 55.9
Ca_07443_v3 Cicer arietinum L. HOM05D006204 ORTHO05D007851 3.3e-135 486.1 421 57.7
Phvul.008G135100 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 7.3e-135 485.0 419 56.8
Sed0024966 Sechium edule HOM05D006204 ORTHO05D007851 9.5e-135 484.6 465 54.2
Glyma.08G343200 Glycine max HOM05D006204 ORTHO05D007851 1.2e-134 484.2 419 55.8
Phvul.008G135200 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 3.6e-134 482.6 416 57.2
Lalb_Chr19g0126211 Lupinus albus HOM05D006204 ORTHO05D007851 1.0e-133 481.1 421 56.3
Ah.02g111080 Amaranthus hybridus HOM05D006204 ORTHO05D007851 1.8e-133 480.3 414 54.6
Hund09476 Selenicereus undatus HOM05D006204 ORTHO05D007851 2.0e-132 476.9 416 55.8
ATR0743G111 Amborella trichopoda HOM05D006204 ORTHO05D007851 6.4e-131 471.9 425 56.7
THA.LOC104802642 Tarenaya hassleriana HOM05D006204 ORTHO05D007851 3.2e-130 469.5 390 60.3
CARHR183670 Cardamine hirsuta HOM05D006204 ORTHO05D007851 1.6e-129 467.2 430 55.6
DCAR_000507 Daucus carota HOM05D006204 ORTHO05D007851 1.3e-128 464.2 446 55.4
COL.COLO4_06929 Corchorus olitorius HOM05D006204 ORTHO05D007851 1.9e-127 460.3 458 54.8
Psat3g151720 Pisum sativum HOM05D006204 ORTHO05D007851 7.3e-127 458.4 394 57.4
MBI11_g40788_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 5.2e-125 452.2 370 58.9
GSVIVG01003799001 Vitis vinifera HOM05D006204 ORTHO05D007851 1.5e-124 450.7 442 53.8
VMungo1383G3498 Vigna mungo HOM05D006204 ORTHO05D007851 3.4e-124 449.5 406 55.4
EL10Ac5g10598 Beta vulgaris HOM05D006204 ORTHO05D007851 1.7e-123 447.2 421 52.5
vmacro02824 Vaccinium macrocarpon HOM05D006204 ORTHO05D007851 7.1e-122 441.8 437 54.5
Zm00001eb318320 Zea mays HOM05D006204 ORTHO05D007851 1.2e-121 441.0 420 53.1
arahy.Tifrunner.gnm1.ann1.LI75FD Arachis hypogaea HOM05D006204 ORTHO05D007851 7.8e-121 438.3 455 50.3
Nn1g09591 Nelumbo nucifera HOM05D006204 ORTHO05D007851 3.9e-120 436.0 364 57.4
Hund09342 Selenicereus undatus HOM05D006204 ORTHO05D007851 2.5e-119 433.3 428 50.0
Sc17g0001620 Simmondsia chinensis HOM05D006204 ORTHO05D007851 1.1e-111 407.9 365 53.4
VMungo1383G1750 Vigna mungo HOM05D006204 ORTHO05D007851 8.1e-110 401.7 365 53.4
TAR362G0101 Trochodendron aralioides HOM05D006204 ORTHO05D007851 2.1e-105 387.1 324 60.5
AUR62028656 Chenopodium quinoa HOM05D006204 ORTHO05D007851 5.1e-104 382.5 417 48.0
Pp3c13_24490 Physcomitrium patens HOM05D006204 ORTHO05D007851 5.8e-100 369.0 423 46.3
AagrBONN_evm.TU.Sc2ySwM_344.1300 Anthoceros agrestis HOM05D006204 ORTHO05D007851 6.4e-99 365.5 429 45.5
Actinidia30007 Actinidia chinensis HOM05D006204 ORTHO05D007851 2.0e-92 344.0 285 62.5
AUR62027071 Chenopodium quinoa HOM05D006204 ORTHO05D007851 3.8e-91 339.7 429 44.5
AUR62030912 Chenopodium quinoa HOM05D006204 ORTHO05D007851 5.5e-90 335.9 419 45.6
SMO364G0271 Selaginella moellendorffii HOM05D006204 ORTHO05D007851 1.3e-86 324.7 402 43.8
Hma1.2p1_0161F.1_g071500 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 2.2e-83 313.9 222 65.8
Mapoly0020s0122 Marchantia polymorpha HOM05D006204 ORTHO05D007851 1.1e-82 311.6 412 41.7
Ah.01g024240 Amaranthus hybridus HOM05D006204 ORTHO05D007851 2.2e-75 287.3 374 44.1
AUR62043643 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.5e-71 274.6 297 47.8
Haze_03570 Corylus avellana HOM05D006204 ORTHO05D007851 5.0e-67 259.6 326 45.1
Atru.chr6.3536 Acer truncatum HOM05D006204 ORTHO05D007851 3.2e-66 256.9 273 49.8
MELO3C015716.2 Cucumis melo HOM05D006204 ORTHO05D007851 2.5e-63 247.3 193 60.6
SEGI_17774 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 9.4e-50 202.2 219 47.0
Cre07.g346800 Chlamydomonas reinhardtii HOM05D006204 ORTHO05D007851 2.6e-47 194.1 452 32.5
Actinidia27653 Actinidia chinensis HOM05D006204 ORTHO05D007851 2.0e-39 167.9 126 65.1
QL09p047008 Quercus lobata HOM05D006204 ORTHO05D007851 2.8e-38 164.1 456 29.4
Cc10_g08090 Coffea canephora HOM05D006204 ORTHO05D007851 2.9e-35 154.1 192 49.0
SEGI_39676 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 5.7e-31 139.8 110 63.6
MELO3C029187.2 Cucumis melo HOM05D006204 ORTHO05D007851 1.3e-30 138.7 105 65.7
Psat0s4407g0040 Pisum sativum HOM05D006204 ORTHO05D007851 4.1e-29 133.7 105 61.0
HPP92_002747 Vanilla planifolia HOM05D006204 ORTHO05D007851 2.3e-27 127.9 116 54.3
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 1.2e-23 115.5 400 25.5
Atru.chr6.3537 Acer truncatum HOM05D006204 ORTHO05D007851 7.0e-21 106.3 114 50.9
Phvul.L001686 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 2.0e-20 104.8 92 58.7
SEGI_16048 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 2.9e-14 84.3 83 48.2
MBI11_g40786_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 9.2e-13 79.3 52 80.8
HPP92_002746 Vanilla planifolia HOM05D006204 ORTHO05D007851 3.9e-11 73.9 69 53.6
HPP92_002705 Vanilla planifolia HOM05D006204 ORTHO05D007851 4.3e-10 70.5 50 62.0
Psat7g213000 Pisum sativum HOM05D006204 ORTHO05D007851 2.3e-08 64.7 75 48.0
Os09g0514100 Oryza sativa ssp. japonica HOM05D006204 ORTHO05D007851 2.0e-07 61.6 104 45.2


User provided reference genes

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