Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold548G52847 Striga asiatica HOM05D000497 ORTHO05D000020 2.5e-101 372.1 185 100.0
SGA_v2.0_scaffold5G02983 Striga asiatica HOM05D000497 ORTHO05D000020 4.3e-69 265.0 299 53.8
Oeu007844.1 Olea europaea HOM05D000497 ORTHO05D000020 8.0e-23 111.3 159 44.0
Actinidia20193 Actinidia chinensis HOM05D000050 ORTHO05D000020 5.3e-19 98.6 148 41.9
Nitab4.5_0000305g0140 Nicotiana tabacum HOM05D000497 ORTHO05D000020 6.5e-17 91.7 156 42.9
Nitab4.5_0012460g0010 Nicotiana tabacum HOM05D000497 ORTHO05D000020 7.2e-16 88.2 158 40.5
Dinv36007 Davidia involucrata HOM05D001532 ORTHO05D001402 2.1e-15 86.7 143 39.9
Dinv32552 Davidia involucrata HOM05D000497 ORTHO05D000020 6.1e-15 85.1 137 39.4
Cc02_g38950 Coffea canephora HOM05D000497 ORTHO05D000020 6.8e-14 81.6 182 35.7
Peaxi162Scf01012g00013 Petunia axillaris HOM05D000497 ORTHO05D000020 6.8e-14 81.6 170 40.0
Lj9P592T60 Lonicera japonica HOM05D000497 ORTHO05D000020 2.0e-13 80.1 144 34.7
Migut.B01832 Erythranthe guttata HOM05D000497 ORTHO05D000020 3.4e-13 79.3 150 37.3
CAN.G986.47 Capsicum annuum HOM05D000497 ORTHO05D000020 4.4e-13 79.0 155 40.0
TAR375G1156 Trochodendron aralioides HOM05D000497 ORTHO05D000020 7.5e-13 78.2 171 33.9
Hma1.2p1_0384F.1_g141040 Hydrangea macrophylla HOM05D000497 ORTHO05D000020 2.8e-12 76.3 297 26.3
SGA_v2.0_scaffold11G05718 Striga asiatica HOM05D000497 ORTHO05D000020 3.7e-12 75.9 286 27.6
Potri.002G167400 Populus trichocarpa HOM05D000497 ORTHO05D000020 4.8e-12 75.5 160 34.4
Sabra14G0069100 Salix brachista HOM05D000497 ORTHO05D000020 4.1e-11 72.4 159 33.3
TAR374G1231 Trochodendron aralioides HOM05D000497 ORTHO05D000020 4.1e-11 72.4 172 31.4
SHI13142 Sapria himalayana HOM05D000497 ORTHO05D000020 5.4e-11 72.0 144 35.4
Duzib133G1167 Durio zibethinus HOM05D000497 ORTHO05D000020 9.1e-11 71.2 152 34.2
Eucgr.D02344 Eucalyptus grandis HOM05D000497 ORTHO05D000020 1.2e-10 70.9 147 33.3
PGR031G3682 Punica granatum HOM05D000497 ORTHO05D000020 1.6e-10 70.5 146 35.6
Actinidia08622 Actinidia chinensis HOM05D000497 ORTHO05D000020 5.9e-10 68.6 156 32.1
Duzib138G1366 Durio zibethinus HOM05D000497 ORTHO05D000020 1.3e-09 67.4 151 35.1
Potri.014G094500 Populus trichocarpa HOM05D000497 ORTHO05D000020 1.3e-09 67.4 159 33.3
Sabra02G0144300 Salix brachista HOM05D000497 ORTHO05D000020 1.3e-09 67.4 162 29.6
TWI59G0363 Tripterygium wilfordii HOM05D000497 ORTHO05D000020 1.3e-09 67.4 150 32.7
Thecc.01G347800 Theobroma cacao HOM05D000497 ORTHO05D000020 1.7e-09 67.0 149 32.2
Atru.chr5.618 Acer truncatum HOM05D000497 ORTHO05D000020 5.0e-09 65.5 152 31.6
Actinidia03155 Actinidia chinensis HOM05D000497 ORTHO05D000020 5.0e-09 65.5 156 32.7
Nn1g01791 Nelumbo nucifera HOM05D000497 ORTHO05D000020 6.5e-09 65.1 177 30.5
COL.COLO4_06335 Corchorus olitorius HOM05D000497 ORTHO05D000020 1.1e-08 64.3 150 32.7
Rhsim03G0198200 Rhododendron simsii HOM05D000497 ORTHO05D000020 1.1e-08 64.3 192 30.2
Gohir.A07G139800 Gossypium hirsutum HOM05D000497 ORTHO05D000020 1.5e-08 63.9 151 32.5
Gohir.D07G145000 Gossypium hirsutum HOM05D000497 ORTHO05D000020 1.9e-08 63.5 151 32.5
Gorai.001G156900 Gossypium raimondii HOM05D000497 ORTHO05D000020 1.9e-08 63.5 151 32.5
CiPaw.01G071800 Carya illinoinensis HOM05D000497 ORTHO05D000020 2.5e-08 63.2 176 30.1
vmacro10102 Vaccinium macrocarpon HOM05D000497 ORTHO05D000020 2.5e-08 63.2 179 29.6
Solyc01g095500.3 Solanum lycopersicum HOM05D000497 ORTHO05D000020 3.2e-08 62.8 137 37.2
Actinidia31862 Actinidia chinensis HOM05D000497 ORTHO05D000020 4.2e-08 62.4 184 28.8
vmacro23246 Vaccinium macrocarpon HOM05D000497 ORTHO05D000020 5.5e-08 62.0 200 30.0
Rhsim07G0007100 Rhododendron simsii HOM05D000497 ORTHO05D000020 7.2e-08 61.6 168 31.5
Sopen01g039250 Solanum pennellii HOM05D000497 ORTHO05D000020 1.2e-07 60.8 137 35.0
Rhsim09G0203500 Rhododendron simsii HOM05D000497 ORTHO05D000020 2.1e-07 60.1 183 31.1
vmacro13198 Vaccinium macrocarpon HOM05D000497 ORTHO05D000020 3.6e-07 59.3 211 28.4
Solyc06g051840.1 Solanum lycopersicum HOM05D000497 ORTHO05D000020 4.7e-07 58.9 163 31.9
TAR636G3154 Trochodendron aralioides HOM05D000497 ORTHO05D000020 4.7e-07 58.9 121 34.7
Manes.01G249600 Manihot esculenta HOM05D000497 ORTHO05D000020 1.4e-06 57.4 163 30.1
Sopen06g017870 Solanum pennellii HOM05D000497 ORTHO05D000020 2.3e-06 56.6 174 29.9
Gohir.A09G183600 Gossypium hirsutum HOM05D000497 ORTHO05D000020 3.0e-06 56.2 187 30.5
Lsat_1_v5_gn_7_1840 Lactuca sativa HOM05D000497 ORTHO05D000020 4.0e-06 55.8 149 32.9
TWI81G0255 Tripterygium wilfordii HOM05D000497 ORTHO05D000020 4.0e-06 55.8 168 29.8
Dinv14886 Davidia involucrata HOM05D001532 ORTHO05D001402 5.2e-06 55.5 72 43.1
Nitab4.5_0011338g0010 Nicotiana tabacum HOM05D000497 ORTHO05D000020 6.8e-06 55.1 161 29.2
Thecc.03G192000 Theobroma cacao HOM05D000497 ORTHO05D000020 6.8e-06 55.1 199 28.1
Manes.14G019032 Manihot esculenta HOM05D000497 ORTHO05D000020 8.8e-06 54.7 180 30.6


User provided reference genes

Program Settings