Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold5371G54636 Striga asiatica HOM05D000276 ORTHO05D006204 1.8e-72 275.8 140 100.0
SalBow6G5970 Salvia bowleyana HOM05D000276 ORTHO05D006204 1.3e-36 156.8 149 60.4
MSTRG.10914 Avicennia marina HOM05D000276 ORTHO05D006204 2.8e-36 155.6 150 59.3
MELO3C022698.2 Cucumis melo HOM05D000276 ORTHO05D006204 2.8e-36 155.6 150 58.7
ClCG07G014300 Citrullus lanatus HOM05D000276 ORTHO05D006204 1.1e-35 153.7 150 58.0
CsaV3_3G031000 Cucumis sativus L. HOM05D000276 ORTHO05D006204 1.4e-35 153.3 150 58.0
Migut.I01129 Erythranthe guttata HOM05D000276 ORTHO05D006204 9.0e-35 150.6 153 59.5
Sed0017728 Sechium edule HOM05D000276 ORTHO05D006204 9.0e-35 150.6 147 57.8
MSTRG.22517 Avicennia marina HOM05D000276 ORTHO05D006204 5.8e-34 147.9 151 57.0
Lj5A30G67 Lonicera japonica HOM05D000276 ORTHO05D006204 8.4e-33 144.1 124 62.9
CiPaw.01G211700 Carya illinoinensis HOM05D000276 ORTHO05D006204 3.2e-32 142.1 122 63.1
vmacro15085 Vaccinium macrocarpon HOM05D000276 ORTHO05D006204 3.2e-32 142.1 125 62.4
vmacro18765 Vaccinium macrocarpon HOM05D000276 ORTHO05D006204 3.2e-32 142.1 125 62.4
Oeu059014.1 Olea europaea HOM05D000276 ORTHO05D006204 5.4e-32 141.4 150 57.3
Sopen03g041360 Solanum pennellii HOM05D000276 ORTHO05D006204 7.1e-32 141.0 145 57.9
Peaxi162Scf00038g02240 Petunia axillaris HOM05D000276 ORTHO05D006204 9.3e-32 140.6 149 55.7
Solyc03g123590.4 Solanum lycopersicum HOM05D000276 ORTHO05D006204 1.2e-31 140.2 145 57.2
PGSC0003DMG400009148 Solanum tuberosum HOM05D000276 ORTHO05D006204 1.6e-31 139.8 124 64.5
Nitab4.5_0008337g0030 Nicotiana tabacum HOM05D000276 ORTHO05D006204 2.1e-31 139.4 149 56.4
Nitab4.5_0010687g0030 Nicotiana tabacum HOM05D000276 ORTHO05D006204 2.1e-31 139.4 149 56.4
Cc04_g00750 Coffea canephora HOM05D000276 ORTHO05D006204 2.7e-31 139.0 152 55.9
Rhsim08G0244500 Rhododendron simsii HOM05D000276 ORTHO05D006204 2.7e-31 139.0 126 61.9
Aqoxy4G00012 Aquilegia oxysepala HOM05D000276 ORTHO05D006204 7.9e-31 137.5 132 60.6
CANSAT56G1386 Cannabis sativa HOM05D000276 ORTHO05D006204 7.9e-31 137.5 146 52.7
Aqoxy7G04179 Aquilegia oxysepala HOM05D000276 ORTHO05D006204 1.8e-30 136.3 132 59.8
CAN.G790.61 Capsicum annuum HOM05D000276 ORTHO05D006204 2.3e-30 136.0 149 55.0
Nn6g35726 Nelumbo nucifera HOM05D000276 ORTHO05D006204 1.9e-29 132.9 149 53.0
Actinidia24430 Actinidia chinensis HOM05D000276 ORTHO05D003951 5.6e-29 131.3 150 54.7
Lsat_1_v5_gn_1_39200 Lactuca sativa HOM05D000276 ORTHO05D006204 5.6e-29 131.3 140 56.4
TAR383G0418 Trochodendron aralioides HOM05D000276 ORTHO05D006204 5.6e-29 131.3 133 57.9
unitig_749.g14034 Utricularia gibba HOM05D000276 ORTHO05D006204 9.6e-29 130.6 150 54.7
TWI59G1360 Tripterygium wilfordii HOM05D000276 ORTHO05D006204 2.8e-28 129.0 122 59.8
Sabra01G0129700 Salix brachista HOM05D000276 ORTHO05D006204 3.6e-28 128.6 149 51.7
AUR62001408 Chenopodium quinoa HOM05D000276 ORTHO05D006204 9.0e-27 124.0 125 59.2
AUR62025617 Chenopodium quinoa HOM05D000276 ORTHO05D006204 9.0e-27 124.0 125 59.2
Sed0020238 Sechium edule HOM05D000276 ORTHO05D006204 1.2e-26 123.6 138 53.6
Lj9C538T3 Lonicera japonica HOM05D000276 ORTHO05D006204 1.5e-26 123.2 124 58.9
Hund18639 Selenicereus undatus HOM05D000276 ORTHO05D006204 2.6e-26 122.5 127 59.1
CiPaw.02G131200 Carya illinoinensis HOM05D000276 ORTHO05D006204 3.4e-26 122.1 123 57.7
MBI13_g01693_MAGBIO Magnolia biondii HOM05D000276 ORTHO05D006204 4.5e-26 121.7 122 59.8
Eucgr.I02162 Eucalyptus grandis HOM05D000276 ORTHO05D006204 5.8e-26 121.3 151 50.3
QL05p001260 Quercus lobata HOM05D000276 ORTHO05D006204 7.6e-26 120.9 123 57.7
Phvul.009G261800 Phaseolus vulgaris HOM05D000276 ORTHO05D006204 1.7e-25 119.8 121 56.2
MBI19_g32870_MAGBIO Magnolia biondii HOM05D000276 ORTHO05D006204 2.2e-25 119.4 120 57.5
COL.COLO4_30861 Corchorus olitorius HOM05D000276 ORTHO05D006204 3.8e-25 118.6 124 55.6
ECA247G2873 Erigeron canadensis HOM05D000276 ORTHO05D006204 3.8e-25 118.6 140 52.9
Atru.chr1.4144 Acer truncatum HOM05D000276 ORTHO05D006204 4.9e-25 118.2 122 57.4
CSS0009948 Camellia sinensis var. sinensis HOM05D000276 ORTHO05D006204 4.9e-25 118.2 151 52.3
Rhsim12G0213200 Rhododendron simsii HOM05D000276 ORTHO05D003951 1.9e-24 116.3 139 51.1
Duzib192G0480 Durio zibethinus HOM05D000276 ORTHO05D006204 2.4e-24 115.9 122 54.9
PSO135G0530 Papaver somniferum HOM05D000276 ORTHO05D006204 2.4e-24 115.9 155 52.3
Sc15g0000800 Simmondsia chinensis HOM05D000276 ORTHO05D006204 3.2e-24 115.5 124 57.3
EL10Ac7g16493 Beta vulgaris HOM05D000276 ORTHO05D006204 4.2e-24 115.2 129 56.6
PSO724G0674 Papaver somniferum HOM05D000276 ORTHO05D006204 4.2e-24 115.2 155 50.3
Os11g0616300 Oryza sativa ssp. japonica HOM05D000276 ORTHO05D006204 9.3e-24 114.0 153 47.1
FvH4_6g35790 Fragaria vesca HOM05D000276 ORTHO05D006204 1.2e-23 113.6 125 52.0
FAN05G4018 Fragaria x ananassa HOM05D000276 ORTHO05D006204 1.2e-23 113.6 125 52.0
FAN14G2098 Fragaria x ananassa HOM05D000276 ORTHO05D006204 1.2e-23 113.6 125 52.0
FAN14G4808 Fragaria x ananassa HOM05D000276 ORTHO05D006204 1.2e-23 113.6 125 52.0
RcHm_v2.0_Chr2g0147831 Rosa chinensis HOM05D000276 ORTHO05D006204 1.2e-23 113.6 125 52.0
FAN09G0859 Fragaria x ananassa HOM05D000276 ORTHO05D006204 1.6e-23 113.2 125 52.0
Potri.001G163000 Populus trichocarpa HOM05D000276 ORTHO05D006204 2.1e-23 112.8 149 47.7
Manes.11G012900 Manihot esculenta HOM05D000276 ORTHO05D006204 2.7e-23 112.5 150 48.7
Dinv37820 Davidia involucrata HOM05D000276 ORTHO05D006204 1.0e-22 110.5 149 47.0
Gohir.A10G047611 Gossypium hirsutum HOM05D000276 ORTHO05D006204 1.0e-22 110.5 149 47.0
PGR119G2259 Punica granatum HOM05D000276 ORTHO05D006204 1.0e-22 110.5 124 57.3
Thecc.06G129800 Theobroma cacao HOM05D000276 ORTHO05D006204 1.0e-22 110.5 124 53.2
Ciclev10025517m.g Citrus clementina HOM05D000276 ORTHO05D006204 2.3e-22 109.4 149 47.0
Gorai.011G055400 Gossypium raimondii HOM05D000276 ORTHO05D006204 2.3e-22 109.4 149 46.3
CDE06G0894 Ceratophyllum demersum HOM05D000276 ORTHO05D006204 3.9e-22 108.6 131 51.1
Gohir.D10G051900 Gossypium hirsutum HOM05D000276 ORTHO05D006204 1.5e-21 106.7 149 45.6
Lalb_Chr17g0343241 Lupinus albus HOM05D000276 ORTHO05D006204 1.9e-21 106.3 149 44.3
CDE03G0116 Ceratophyllum demersum HOM05D000276 ORTHO05D006204 3.3e-21 105.5 120 53.3
Duzib235G0075 Durio zibethinus HOM05D000276 ORTHO05D006204 9.6e-21 104.0 149 46.3
Lsat_1_v5_gn_4_92260 Lactuca sativa HOM05D000276 ORTHO05D006204 2.1e-20 102.8 124 54.0
TAR626G1847 Trochodendron aralioides HOM05D000276 ORTHO05D006204 3.7e-20 102.1 122 51.6
AL1G62570 Arabidopsis lyrata HOM05D000276 ORTHO05D006204 6.2e-20 101.3 119 52.1
Haze_16133 Corylus avellana HOM05D000276 ORTHO05D006204 6.2e-20 101.3 122 51.6
TWI23G0693 Tripterygium wilfordii HOM05D000276 ORTHO05D006204 6.2e-20 101.3 122 50.8
Carub.0001s4314 Capsella rubella HOM05D000276 ORTHO05D006204 8.1e-20 100.9 120 52.5
Cfa003463 Carpinus fangiana HOM05D000276 ORTHO05D006204 1.1e-19 100.5 122 51.6
Phvul.010G123300 Phaseolus vulgaris HOM05D000276 ORTHO05D006204 1.4e-19 100.1 122 50.8
VMungo0331G0415 Vigna mungo HOM05D000276 ORTHO05D006204 1.4e-19 100.1 122 50.8
MD17G1154200 Malus domestica HOM05D000276 ORTHO05D006204 1.8e-19 99.8 122 50.8
HPP92_011049 Vanilla planifolia HOM05D000276 ORTHO05D006204 1.8e-19 99.8 125 52.8
VMungo1309G2546 Vigna mungo HOM05D000276 ORTHO05D006204 3.1e-19 99.0 122 48.4
Glyma.07G045800 Glycine max HOM05D000276 ORTHO05D006204 4.0e-19 98.6 122 50.0
Glyma.16G013800 Glycine max HOM05D000276 ORTHO05D006204 4.0e-19 98.6 122 50.0
Hma1.2p1_0229F.1_g097050 Hydrangea macrophylla HOM05D000276 ORTHO05D006204 5.3e-19 98.2 126 50.0
SHI25222 Sapria himalayana HOM05D000276 ORTHO05D006204 6.9e-19 97.8 125 52.8
GSVIVG01016672001 Vitis vinifera HOM05D000276 ORTHO05D006204 6.9e-19 97.8 122 50.0
AT1G53860 Arabidopsis thaliana HOM05D000276 ORTHO05D006204 2.0e-18 96.3 119 50.4
Manes.04G150700 Manihot esculenta HOM05D000276 ORTHO05D006204 2.0e-18 96.3 151 43.7
CARHR044190 Cardamine hirsuta HOM05D000276 ORTHO05D006204 2.6e-18 95.9 120 51.7
BcaB07g33286 Brassica carinata HOM05D000276 ORTHO05D006204 5.8e-18 94.7 142 46.5
SEGI_36040 Sequoiadendron giganteum HOM05D000276 ORTHO05D006204 5.8e-18 94.7 130 47.7
BcaC08g43563 Brassica carinata HOM05D000276 ORTHO05D003951 1.3e-17 93.6 138 47.1
C06p09620 Brassica napus HOM05D000276 ORTHO05D003951 1.3e-17 93.6 138 47.1
BolC6t36034H Brassica oleracea HOM05D000276 ORTHO05D003951 1.3e-17 93.6 138 47.1
Cpa.g.sc25.188 Carica papaya HOM05D000276 ORTHO05D006204 4.9e-17 91.7 145 42.8
Cpa.g.sc25.189 Carica papaya HOM05D000276 ORTHO05D006204 4.9e-17 91.7 145 42.8
A06p00740 Brassica napus HOM05D000276 ORTHO05D003951 8.4e-17 90.9 120 50.8
BraA06t23308Z Brassica rapa HOM05D000276 ORTHO05D003951 8.4e-17 90.9 120 50.8
ECA234G3069 Erigeron canadensis HOM05D000276 ORTHO05D006204 1.1e-16 90.5 122 45.1
Dinv20385 Davidia involucrata HOM05D000276 ORTHO05D003951 3.2e-16 89.0 143 42.7
BcaC08g44139 Brassica carinata HOM05D000276 ORTHO05D003951 1.6e-15 86.7 140 44.3
MD09G1173100 Malus domestica HOM05D000276 ORTHO05D006204 1.6e-15 86.7 122 45.9
Prupe.3G031200 Prunus persica HOM05D000276 ORTHO05D006204 1.6e-15 86.7 122 46.7
C06p15390 Brassica napus HOM05D000276 ORTHO05D003951 2.1e-15 86.3 140 44.3
BcaB02g10881 Brassica carinata HOM05D000276 ORTHO05D006204 3.5e-15 85.5 142 44.4
TAR624G0068 Trochodendron aralioides HOM05D000276 ORTHO05D006204 3.5e-15 85.5 146 44.5
A05p17850 Brassica napus HOM05D000276 ORTHO05D006204 4.6e-15 85.1 140 43.6
BraA05t20675Z Brassica rapa HOM05D000276 ORTHO05D006204 4.6e-15 85.1 140 43.6
HanXRQChr10g0312011 Helianthus annuus HOM05D000276 ORTHO05D006204 6.0e-15 84.7 125 45.6
BolC6t36712H Brassica oleracea HOM05D000276 ORTHO05D006204 7.9e-15 84.3 140 43.6
THA.LOC104810585 Tarenaya hassleriana HOM05D000276 ORTHO05D006204 1.8e-14 83.2 150 40.7
ATR0099G058 Amborella trichopoda HOM05D000276 ORTHO05D006204 3.0e-14 82.4 150 42.0
Thhalv10012249m.g Eutrema salsugineum HOM05D000276 ORTHO05D006204 5.1e-14 81.6 119 47.1
arahy.Tifrunner.gnm1.ann1.XY28YB Arachis hypogaea HOM05D000276 ORTHO05D006204 6.7e-14 81.3 122 45.1
Lalb_Chr10g0101111 Lupinus albus HOM05D000276 ORTHO05D006204 6.7e-14 81.3 122 44.3
arahy.Tifrunner.gnm1.ann1.ISG7DQ Arachis hypogaea HOM05D000276 ORTHO05D006204 8.7e-14 80.9 122 45.1
vmacro22015 Vaccinium macrocarpon HOM05D000276 ORTHO05D006204 1.5e-13 80.1 148 40.5
Ca_28218_v3 Cicer arietinum L. HOM05D000276 ORTHO05D006204 1.9e-13 79.7 124 44.4
Ca_29892_v3 Cicer arietinum L. HOM05D000276 ORTHO05D006204 1.9e-13 79.7 124 44.4
HPP92_026318 Vanilla planifolia HOM05D000276 ORTHO05D006204 1.9e-13 79.7 75 60.0
CDE07G0856 Ceratophyllum demersum HOM05D000276 ORTHO05D006204 1.6e-12 76.6 121 45.5
Sp1g40350 Schrenkiella parvula HOM05D000276 ORTHO05D006204 2.1e-12 76.3 121 46.3
Psat4g165480 Pisum sativum HOM05D000276 ORTHO05D006204 1.1e-11 73.9 125 43.2
Atru.chr1.4141 Acer truncatum HOM05D000276 ORTHO05D006204 1.4e-11 73.6 95 46.3
Lalb_Chr18g0044881 Lupinus albus HOM05D000276 ORTHO05D006204 4.5e-10 68.6 149 37.6
TPR.G8719 Trifolium pratense HOM05D000276 ORTHO05D006204 7.6e-10 67.8 125 40.8
Lj3g0018226 Lotus japonicus HOM05D000276 ORTHO05D006204 1.7e-09 66.6 122 38.5
Medtr8g023130 Medicago truncatula HOM05D000276 ORTHO05D006204 1.7e-09 66.6 125 39.2
CAN.G521.8 Capsicum annuum HOM05D000276 ORTHO05D006204 2.2e-09 66.2 101 42.6
Lsat_1_v5_gn_5_137881 Lactuca sativa HOM05D000276 ORTHO05D006204 3.8e-09 65.5 120 41.7
Aa31LG10G1460 Aethionema arabicum HOM05D000276 ORTHO05D006204 5.0e-09 65.1 124 39.5
THA.LOC104824101 Tarenaya hassleriana HOM05D002431 ORTHO05D002543 5.1e-06 55.1 143 32.9
BraA06t27253Z Brassica rapa HOM05D002431 ORTHO05D002543 8.7e-06 54.3 130 33.8


User provided reference genes

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