Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold5281G54621 Striga asiatica HOM05D003223 ORTHO05D004865 3.1e-182 641.7 339 100.0
MSTRG.8249 Avicennia marina HOM05D003223 ORTHO05D004865 2.6e-144 515.8 297 85.2
Migut.N00792 Erythranthe guttata HOM05D003223 ORTHO05D004865 3.4e-144 515.4 299 84.6
Hund13720 Selenicereus undatus HOM05D003223 ORTHO05D004865 9.8e-144 513.8 310 82.6
Rhsim02G0071800 Rhododendron simsii HOM05D003223 ORTHO05D004865 4.1e-142 508.4 299 83.9
vmacro06742 Vaccinium macrocarpon HOM05D003223 ORTHO05D004865 9.1e-142 507.3 297 84.2
vmacro18729 Vaccinium macrocarpon HOM05D003223 ORTHO05D004865 2.0e-141 506.1 297 83.8
Oeu044063.4 Olea europaea HOM05D003223 ORTHO05D004865 4.5e-141 505.0 295 84.4
Peaxi162Scf00647g00521 Petunia axillaris HOM05D003223 ORTHO05D004865 7.7e-141 504.2 335 75.8
Nitab4.5_0006602g0010 Nicotiana tabacum HOM05D003223 ORTHO05D004865 1.0e-140 503.8 302 83.4
Solyc01g096830.3 Solanum lycopersicum HOM05D003223 ORTHO05D004865 1.0e-140 503.8 335 76.7
Cfa020911 Carpinus fangiana HOM05D003223 ORTHO05D004865 1.7e-140 503.1 309 81.6
Oeu024852.1 Olea europaea HOM05D003223 ORTHO05D004865 1.7e-140 503.1 295 83.4
Sc09g0001160 Simmondsia chinensis HOM05D003223 ORTHO05D004865 2.3e-140 502.7 302 82.5
Manes.17G018800 Manihot esculenta HOM05D003223 ORTHO05D004865 3.8e-140 501.9 309 81.2
PGSC0003DMG400027506 Solanum tuberosum HOM05D003223 ORTHO05D004865 5.0e-140 501.5 335 76.4
Thecc.05G191900 Theobroma cacao HOM05D003223 ORTHO05D004865 5.0e-140 501.5 298 83.2
Sopen01g040530 Solanum pennellii HOM05D003223 ORTHO05D004865 6.5e-140 501.1 335 76.4
Sopen01g040540 Solanum pennellii HOM05D003223 ORTHO05D004865 6.5e-140 501.1 335 76.4
Ciclev10018565m.g Citrus clementina HOM05D003223 ORTHO05D004865 8.6e-140 500.7 298 82.2
Glyma.06G160800 Glycine max HOM05D003223 ORTHO05D004865 8.6e-140 500.7 309 81.9
Cc11_g05040 Coffea canephora HOM05D003223 ORTHO05D004865 1.1e-139 500.4 335 75.5
Haze_19344 Corylus avellana HOM05D003223 ORTHO05D004865 1.5e-139 500.0 309 81.2
Glyma.04G204800 Glycine max HOM05D003223 ORTHO05D004865 1.9e-139 499.6 309 81.9
Duzib177G0522 Durio zibethinus HOM05D003223 ORTHO05D004865 5.5e-139 498.0 297 83.5
Atru.chr8.881 Acer truncatum HOM05D003223 ORTHO05D004865 7.2e-139 497.7 298 81.9
Nitab4.5_0002687g0120 Nicotiana tabacum HOM05D003223 ORTHO05D004865 9.5e-139 497.3 334 75.4
AUR62008992 Chenopodium quinoa HOM05D003223 ORTHO05D004865 1.6e-138 496.5 309 79.9
VMungo1127G0078 Vigna mungo HOM05D003223 ORTHO05D004865 2.1e-138 496.1 309 80.3
AUR62023309 Chenopodium quinoa HOM05D003223 ORTHO05D004865 2.8e-138 495.7 309 79.6
Phvul.009G158500 Phaseolus vulgaris HOM05D003223 ORTHO05D004865 2.8e-138 495.7 309 79.9
Dinv17906 Davidia involucrata HOM05D003223 ORTHO05D004865 3.6e-138 495.4 342 75.1
CAN.G134.46 Capsicum annuum HOM05D003223 ORTHO05D004865 4.7e-138 495.0 335 75.2
COL.COLO4_04896 Corchorus olitorius HOM05D003223 ORTHO05D004865 4.7e-138 495.0 298 82.2
QL10p038436 Quercus lobata HOM05D003223 ORTHO05D004865 4.7e-138 495.0 308 78.2
CSS0030679 Camellia sinensis var. sinensis HOM05D003223 ORTHO05D004865 6.1e-138 494.6 342 74.6
Ca_17035_v3 Cicer arietinum L. HOM05D003223 ORTHO05D004865 6.1e-138 494.6 310 80.6
Medtr3g097560 Medicago truncatula HOM05D003223 ORTHO05D004865 8.0e-138 494.2 309 80.6
DCAR_009034 Daucus carota HOM05D003223 ORTHO05D004865 1.0e-137 493.8 296 81.4
Lj3A927G13 Lonicera japonica HOM05D003223 ORTHO05D004865 1.0e-137 493.8 303 80.9
Gorai.013G132500 Gossypium raimondii HOM05D003223 ORTHO05D004865 2.3e-137 492.7 310 79.7
Lalb_Chr11g0068881 Lupinus albus HOM05D003223 ORTHO05D004865 2.3e-137 492.7 334 73.7
Gohir.D13G118000 Gossypium hirsutum HOM05D003223 ORTHO05D004865 3.0e-137 492.3 310 79.4
Potri.004G137100 Populus trichocarpa HOM05D003223 ORTHO05D004865 3.0e-137 492.3 309 78.3
unitig_0.g1012 Utricularia gibba HOM05D003223 ORTHO05D004865 3.0e-137 492.3 331 75.2
Cpa.g.sc170.60 Carica papaya HOM05D003223 ORTHO05D004865 4.0e-137 491.9 298 80.5
MD15G1415900 Malus domestica HOM05D003223 ORTHO05D004865 5.2e-137 491.5 314 78.0
Gohir.A13G115100 Gossypium hirsutum HOM05D003223 ORTHO05D004865 6.8e-137 491.1 310 79.0
Psat5g057040 Pisum sativum HOM05D003223 ORTHO05D004865 6.8e-137 491.1 309 79.9
MSTRG.297 Avicennia marina HOM05D003223 ORTHO05D004865 8.9e-137 490.7 380 68.2
PGR031G3736 Punica granatum HOM05D003223 ORTHO05D004865 8.9e-137 490.7 300 81.0
MD08G1222500 Malus domestica HOM05D003223 ORTHO05D004865 1.2e-136 490.3 314 78.0
Nn3g20196 Nelumbo nucifera HOM05D003223 ORTHO05D004865 1.2e-136 490.3 296 80.7
Sed0001545 Sechium edule HOM05D003223 ORTHO05D004865 2.0e-136 489.6 300 81.3
Potri.T012200 Populus trichocarpa HOM05D003223 ORTHO05D004865 2.6e-136 489.2 344 72.7
Sabra19G0001800 Salix brachista HOM05D003223 ORTHO05D004865 2.6e-136 489.2 310 79.7
TWI75G0742 Tripterygium wilfordii HOM05D003223 ORTHO05D004865 2.6e-136 489.2 308 78.6
DCAR_020438 Daucus carota HOM05D003223 ORTHO05D004865 3.4e-136 488.8 297 80.8
Sabra19G0010900 Salix brachista HOM05D003223 ORTHO05D004865 3.4e-136 488.8 310 79.4
Ah.04g166340 Amaranthus hybridus HOM05D002795 ORTHO05D004865 4.4e-136 488.4 310 77.7
TWI31G0834 Tripterygium wilfordii HOM05D003223 ORTHO05D004865 4.4e-136 488.4 308 77.9
CsaV3_2G004550 Cucumis sativus L. HOM05D003223 ORTHO05D004865 5.7e-136 488.0 310 79.4
Lalb_Chr08g0237721 Lupinus albus HOM05D003223 ORTHO05D004865 5.7e-136 488.0 334 72.5
Dinv18129 Davidia involucrata HOM05D003223 ORTHO05D004865 7.5e-136 487.6 298 80.5
Eucgr.H05054 Eucalyptus grandis HOM05D003223 ORTHO05D004865 1.7e-135 486.5 296 80.7
THA.LOC104800414 Tarenaya hassleriana HOM05D003223 ORTHO05D004865 2.2e-135 486.1 298 79.9
EL10Ac2g04575 Beta vulgaris HOM05D003223 ORTHO05D004865 3.7e-135 485.3 297 80.1
ClCG02G016210 Citrullus lanatus HOM05D003223 ORTHO05D004865 3.7e-135 485.3 300 80.7
MELO3C004336.2 Cucumis melo HOM05D003223 ORTHO05D004865 6.3e-135 484.6 300 80.0
Sed0007652 Sechium edule HOM05D003223 ORTHO05D004865 8.3e-135 484.2 301 80.1
CiPaw.16G118900 Carya illinoinensis HOM05D003223 ORTHO05D004865 1.1e-134 483.8 309 78.3
Prupe.1G560300 Prunus persica HOM05D003223 ORTHO05D004865 1.1e-134 483.8 303 78.2
HanXRQChr09g0265231 Helianthus annuus HOM05D003223 ORTHO05D004865 1.4e-134 483.4 291 82.8
Lsat_1_v5_gn_4_179580 Lactuca sativa HOM05D003223 ORTHO05D004865 1.4e-134 483.4 290 83.4
Hma1.2p1_1945F.1_g308610 Hydrangea macrophylla HOM05D003223 ORTHO05D004865 1.8e-134 483.0 299 79.3
Hma1.2p1_1945F.1_g308620 Hydrangea macrophylla HOM05D003223 ORTHO05D004865 1.8e-134 483.0 299 79.3
arahy.Tifrunner.gnm1.ann1.KDQ8ZI Arachis hypogaea HOM05D003223 ORTHO05D004865 2.4e-134 482.6 308 77.6
Aa31LG11G3010 Aethionema arabicum HOM05D003223 ORTHO05D004865 3.1e-134 482.3 298 78.9
BcaC04g23507 Brassica carinata HOM05D003223 ORTHO05D004865 5.4e-134 481.5 298 79.2
BraA09t36331Z Brassica rapa HOM05D003223 ORTHO05D004865 5.4e-134 481.5 298 79.2
PSO384G3388 Papaver somniferum HOM05D003223 ORTHO05D004865 5.4e-134 481.5 296 80.1
arahy.Tifrunner.gnm1.ann1.MF06QU Arachis hypogaea HOM05D003223 ORTHO05D004865 7.0e-134 481.1 295 79.3
Sp2g23580 Schrenkiella parvula HOM05D003223 ORTHO05D004865 7.0e-134 481.1 298 79.5
A09p06850 Brassica napus HOM05D003223 ORTHO05D004865 9.2e-134 480.7 298 79.2
Lj1g0018228 Lotus japonicus HOM05D003223 ORTHO05D004865 9.2e-134 480.7 298 79.5
Thhalv10003540m.g Eutrema salsugineum HOM05D003223 ORTHO05D004865 1.2e-133 480.3 298 78.5
PSO339G5522 Papaver somniferum HOM05D003223 ORTHO05D004865 1.6e-133 479.9 300 79.0
BcaB07g29887 Brassica carinata HOM05D003223 ORTHO05D004865 4.5e-133 478.4 298 78.9
Actinidia36586 Actinidia chinensis HOM05D005219 ORTHO05D004865 5.9e-133 478.0 298 78.5
CARHR189920 Cardamine hirsuta HOM05D003223 ORTHO05D004865 1.7e-132 476.5 295 79.7
A02p40880 Brassica napus HOM05D003223 ORTHO05D004865 2.3e-132 476.1 336 71.4
BraA02t09034Z Brassica rapa HOM05D003223 ORTHO05D004865 2.3e-132 476.1 336 71.4
RcHm_v2.0_Chr7g0225451 Rosa chinensis HOM05D003223 ORTHO05D004865 2.3e-132 476.1 298 80.2
Carub.0006s2139 Capsella rubella HOM05D003223 ORTHO05D004865 2.9e-132 475.7 295 79.3
BcaC03g18022 Brassica carinata HOM05D003223 ORTHO05D004865 5.0e-132 474.9 336 71.4
C02p60780 Brassica napus HOM05D003223 ORTHO05D004865 5.0e-132 474.9 336 71.4
BolC2t12130H Brassica oleracea HOM05D003223 ORTHO05D004865 5.0e-132 474.9 336 71.4
Aqoxy4G02048 Aquilegia oxysepala HOM05D003223 ORTHO05D004865 8.6e-132 474.2 296 80.4
AL6G34910 Arabidopsis lyrata HOM05D003223 ORTHO05D004865 1.1e-131 473.8 295 78.6
SEGI_06157 Sequoiadendron giganteum HOM05D003223 ORTHO05D004865 3.3e-131 472.2 300 76.0
AT5G23630 Arabidopsis thaliana HOM05D003223 ORTHO05D004865 4.3e-131 471.9 295 78.0
FAN04G0579 Fragaria x ananassa HOM05D003223 ORTHO05D004865 9.5e-131 470.7 294 78.2
FAN08G3025 Fragaria x ananassa HOM05D003223 ORTHO05D004865 1.2e-130 470.3 298 78.9
FAN18G2297 Fragaria x ananassa HOM05D003223 ORTHO05D004865 1.2e-130 470.3 298 78.9
Os05g0402800 Oryza sativa ssp. japonica HOM05D003223 ORTHO05D004865 1.2e-130 470.3 307 75.9
FvH4_5g30560 Fragaria vesca HOM05D003223 ORTHO05D004865 1.6e-130 469.9 298 78.9
CANSAT54G2149 Cannabis sativa HOM05D003223 ORTHO05D004865 3.6e-130 468.8 306 78.4
ECA232G4880 Erigeron canadensis HOM05D003223 ORTHO05D004865 3.6e-130 468.8 286 81.5
FAN13G2597 Fragaria x ananassa HOM05D003223 ORTHO05D004865 4.7e-130 468.4 298 78.2
Zm00001eb349830 Zea mays HOM05D003223 ORTHO05D004865 2.3e-129 466.1 300 77.0
TAR544G0002 Trochodendron aralioides HOM05D003223 ORTHO05D004865 2.0e-128 463.0 343 68.8
HPP92_022123 Vanilla planifolia HOM05D003223 ORTHO05D004865 1.1e-126 457.2 297 77.4
Aqoxy5G02750 Aquilegia oxysepala HOM05D003223 ORTHO05D004865 5.4e-126 454.9 307 75.6
ATR0064G088 Amborella trichopoda HOM05D003223 ORTHO05D004865 1.2e-125 453.8 292 76.4
Zm00001eb287640 Zea mays HOM05D003223 ORTHO05D004865 1.2e-125 453.8 298 75.2
HPP92_022135 Vanilla planifolia HOM05D003223 ORTHO05D004865 3.5e-125 452.2 293 77.1
TAR636G0413 Trochodendron aralioides HOM05D003223 ORTHO05D004865 2.5e-123 446.0 270 79.3
AagrBONN_evm.TU.Sc2ySwM_368.2673 Anthoceros agrestis HOM05D003223 ORTHO05D004865 1.1e-115 420.6 296 72.0
Thhalv10027626m.g Eutrema salsugineum HOM05D003223 ORTHO05D004865 7.3e-115 417.9 298 69.8
SMO276G0045 Selaginella moellendorffii HOM05D003223 ORTHO05D004865 2.6e-112 409.5 293 70.6
Mapoly0002s0327 Marchantia polymorpha HOM05D003223 ORTHO05D004865 4.4e-112 408.7 295 71.2
Pp3c2_5380 Physcomitrium patens HOM05D003223 ORTHO05D004865 3.7e-111 405.6 309 67.0
CDE02G1396 Ceratophyllum demersum HOM05D003223 ORTHO05D004865 1.3e-103 380.6 239 80.8
CBR_g48843 Chara braunii HOM05D003223 ORTHO05D004865 5.6e-99 365.2 282 67.0
CARHR190170 Cardamine hirsuta HOM05D003223 ORTHO05D004865 4.6e-93 345.5 233 70.4
TAR633G2269 Trochodendron aralioides HOM05D003223 ORTHO05D004865 1.5e-83 313.9 185 81.1
Actinidia19950 Actinidia chinensis HOM05D003223 ORTHO05D004865 3.7e-82 309.3 289 59.2
FAN02G4497 Fragaria x ananassa HOM05D001060 ORTHO05D000905 2.5e-70 270.0 181 77.9
Duzib106G1784 Durio zibethinus HOM05D003223 ORTHO05D004865 4.6e-69 265.8 182 75.8
Cre17.g744447 Chlamydomonas reinhardtii HOM05D003223 ORTHO05D004865 1.6e-66 257.3 286 49.7
BcaB04g19855 Brassica carinata HOM05D003223 ORTHO05D002974 6.5e-63 245.4 213 62.0
C09p07570 Brassica napus HOM05D003223 ORTHO05D004865 5.1e-60 235.7 148 82.4
BolC9t53674H Brassica oleracea HOM05D003223 ORTHO05D004865 5.1e-60 235.7 148 82.4
MCO03G244 Micromonas commoda HOM05D003223 ORTHO05D004865 7.2e-54 215.3 269 44.6
PRCOL_00004888 Prasinoderma coloniale HOM05D003223 ORTHO05D004865 1.6e-53 214.2 258 43.4
Cfa027207 Carpinus fangiana HOM05D003223 ORTHO05D004865 7.4e-51 205.3 282 41.1
CDE04G2131 Ceratophyllum demersum HOM05D003223 ORTHO05D004865 4.5e-48 196.1 129 80.6
CiPaw.15G184200 Carya illinoinensis HOM05D003223 ORTHO05D004865 3.3e-43 179.9 117 82.9
C09p07580 Brassica napus HOM05D002664 ORTHO05D002974 1.1e-41 174.9 107 73.8
Actinidia20597 Actinidia chinensis HOM05D003223 ORTHO05D004865 1.3e-39 167.9 107 83.2
BcaNung05205 Brassica carinata HOM05D003223 ORTHO05D039635 8.8e-36 155.2 112 66.1
PRCOL_00006825 Prasinoderma coloniale HOM05D003223 ORTHO05D004865 2.6e-35 153.7 296 33.4
MCO16G616 Micromonas commoda HOM05D003223 ORTHO05D004865 3.3e-35 153.3 288 35.4
VMungo1309G2105 Vigna mungo HOM05D003223 ORTHO05D004865 1.7e-31 141.0 93 83.9
Actinidia26635 Actinidia chinensis HOM05D003223 ORTHO05D004865 1.5e-27 127.9 83 83.1
TPR.G7796 Trifolium pratense HOM05D003223 ORTHO05D004865 3.4e-19 100.1 76 71.1
CAN.G1211.4 Capsicum annuum HOM05D003223 ORTHO05D004865 2.7e-16 90.5 105 56.2
Nitab4.5_0001903g0060 Nicotiana tabacum HOM05D000001 ORTHO05D000003 4.5e-16 89.7 69 60.9
Cfa024590 Carpinus fangiana HOM05D003223 ORTHO05D014810 1.5e-14 84.7 221 29.0
DCAR_010872 Daucus carota HOM05D003223 ORTHO05D004865 1.5e-14 84.7 54 66.7
Nitab4.5_0008354g0050 Nicotiana tabacum HOM05D000001 ORTHO05D000003 1.6e-13 81.3 96 46.9
BcaNung05206 Brassica carinata HOM05D003223 ORTHO05D039635 2.3e-12 77.4 85 49.4
Actinidia28935 Actinidia chinensis HOM05D003223 ORTHO05D004865 2.0e-08 64.3 64 54.7
Cre02.g093700 Chlamydomonas reinhardtii HOM05D003223 ORTHO05D014810 1.0e-07 62.0 279 25.4


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