Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold517G52669 Striga asiatica HOM05D005899 ORTHO05D007445 3.9e-176 621.3 304 100.0
Migut.N00303 Erythranthe guttata HOM05D005899 ORTHO05D007445 1.9e-138 496.1 301 79.4
Oeu064565.1 Olea europaea HOM05D005899 ORTHO05D007445 1.1e-133 480.3 301 77.1
Cc02_g31760 Coffea canephora HOM05D005899 ORTHO05D007445 1.2e-124 450.3 297 72.7
Oeu044665.1 Olea europaea HOM05D005899 ORTHO05D007445 1.2e-124 450.3 302 71.9
Dinv11553 Davidia involucrata HOM05D005899 ORTHO05D007445 3.8e-123 445.3 299 73.6
Actinidia05763 Actinidia chinensis HOM05D005899 ORTHO05D007445 5.0e-123 444.9 294 72.1
PGSC0003DMG400022509 Solanum tuberosum HOM05D005899 ORTHO05D007445 5.0e-123 444.9 296 72.6
Solyc01g097800.3 Solanum lycopersicum HOM05D005899 ORTHO05D007445 9.4e-122 440.7 302 71.2
Nitab4.5_0002361g0040 Nicotiana tabacum HOM05D005899 ORTHO05D007445 2.7e-121 439.1 304 69.4
TAR362G0589 Trochodendron aralioides HOM05D005899 ORTHO05D007445 6.1e-121 438.0 291 71.5
CSS0047717 Camellia sinensis var. sinensis HOM05D005899 ORTHO05D007445 2.3e-120 436.0 292 73.3
vmacro14199 Vaccinium macrocarpon HOM05D005899 ORTHO05D007445 2.3e-120 436.0 307 70.7
DCAR_006615 Daucus carota HOM05D005899 ORTHO05D007445 3.0e-120 435.6 292 72.9
Sopen01g041400 Solanum pennellii HOM05D005899 ORTHO05D007445 6.8e-120 434.5 296 70.9
CiPaw.07G006200 Carya illinoinensis HOM05D005899 ORTHO05D007445 1.2e-119 433.7 295 70.2
Rhsim07G0131800 Rhododendron simsii HOM05D005899 ORTHO05D007445 1.5e-119 433.3 301 70.8
Lj7P487T33 Lonicera japonica HOM05D005899 ORTHO05D007445 2.0e-119 433.0 302 69.2
RcHm_v2.0_Chr3g0451931 Rosa chinensis HOM05D005899 ORTHO05D007445 2.6e-119 432.6 292 69.9
FvH4_6g03430 Fragaria vesca HOM05D005899 ORTHO05D007445 5.7e-119 431.4 292 70.2
Cfa006459 Carpinus fangiana HOM05D005899 ORTHO05D007445 2.2e-118 429.5 295 69.2
QL03p024530 Quercus lobata HOM05D005899 ORTHO05D007445 2.8e-118 429.1 294 68.7
Prupe.6G339900 Prunus persica HOM05D005899 ORTHO05D007445 1.4e-117 426.8 297 68.0
FAN14G1139 Fragaria x ananassa HOM05D005899 ORTHO05D007445 1.8e-117 426.4 293 69.3
FAN02G1821 Fragaria x ananassa HOM05D005899 ORTHO05D007445 5.9e-116 421.4 291 68.4
arahy.Tifrunner.gnm1.ann1.41KAT0 Arachis hypogaea HOM05D005899 ORTHO05D007445 7.7e-116 421.0 291 68.0
MD12G1237200 Malus domestica HOM05D005899 ORTHO05D007445 3.8e-115 418.7 294 69.4
ECA233G4289 Erigeron canadensis HOM05D005899 ORTHO05D007445 6.5e-115 417.9 294 67.0
CANSAT54G2589 Cannabis sativa HOM05D005899 ORTHO05D007445 1.5e-114 416.8 297 67.3
Gorai.007G285000 Gossypium raimondii HOM05D005899 ORTHO05D007445 1.5e-114 416.8 292 66.4
VMungo0540G1799 Vigna mungo HOM05D005899 ORTHO05D007445 4.2e-114 415.2 291 69.4
CDE05G2514 Ceratophyllum demersum HOM05D005899 ORTHO05D007445 5.5e-114 414.8 288 69.1
Manes.09G155900 Manihot esculenta HOM05D005899 ORTHO05D007445 5.5e-114 414.8 300 65.7
Thecc.05G288500 Theobroma cacao HOM05D005899 ORTHO05D007445 5.5e-114 414.8 292 66.1
Duzib177G0382 Durio zibethinus HOM05D005899 ORTHO05D007445 7.2e-114 414.5 292 66.4
BcaB03g11648 Brassica carinata HOM05D005899 ORTHO05D007445 2.1e-113 412.9 291 69.1
Gohir.A11G255200 Gossypium hirsutum HOM05D005899 ORTHO05D007445 2.1e-113 412.9 292 65.8
Ciclev10001942m.g Citrus clementina HOM05D005899 ORTHO05D007445 2.7e-113 412.5 296 67.6
Gohir.D11G264900 Gossypium hirsutum HOM05D005899 ORTHO05D007445 2.7e-113 412.5 292 66.1
AT3G04880 Arabidopsis thaliana HOM05D005899 ORTHO05D007445 4.7e-113 411.8 301 68.1
C05p62440 Brassica napus HOM05D005899 ORTHO05D007445 4.7e-113 411.8 298 68.5
Duzib128G1862 Durio zibethinus HOM05D005899 ORTHO05D007445 4.7e-113 411.8 292 66.4
TPR.G6971 Trifolium pratense HOM05D005899 ORTHO05D007445 4.7e-113 411.8 294 66.3
BraA05t22981Z Brassica rapa HOM05D005899 ORTHO05D007445 8.0e-113 411.0 298 68.5
Ciclev10001941m.g Citrus clementina HOM05D005899 ORTHO05D007445 8.0e-113 411.0 296 67.6
Medtr7g114750 Medicago truncatula HOM05D005899 ORTHO05D007445 1.0e-112 410.6 295 66.1
Phvul.006G099800 Phaseolus vulgaris HOM05D005899 ORTHO05D007445 3.0e-112 409.1 291 68.4
Glyma.19G243000 Glycine max HOM05D005899 ORTHO05D007445 4.0e-112 408.7 291 67.4
Lsat_1_v5_gn_6_53000 Lactuca sativa HOM05D005899 ORTHO05D007445 4.0e-112 408.7 296 66.9
Aa31LG5G15270 Aethionema arabicum HOM05D005899 ORTHO05D007445 5.2e-112 408.3 301 66.4
BolC5t34897H Brassica oleracea HOM05D005899 ORTHO05D007445 6.8e-112 407.9 298 68.1
CARHR079150 Cardamine hirsuta HOM05D005899 ORTHO05D007445 6.8e-112 407.9 303 66.3
A05p42720 Brassica napus HOM05D005899 ORTHO05D007445 1.2e-111 407.1 298 67.4
TWI56G0091 Tripterygium wilfordii HOM05D005899 ORTHO05D007445 1.2e-111 407.1 299 66.6
Sed0018425 Sechium edule HOM05D005899 ORTHO05D007445 7.5e-111 404.4 295 66.4
MBI01_g13083_MAGBIO Magnolia biondii HOM05D005899 ORTHO05D007445 1.7e-110 403.3 291 67.4
Ca_09408_v3 Cicer arietinum L. HOM05D005899 ORTHO05D007445 2.2e-110 402.9 291 65.6
Lj1g0012490 Lotus japonicus HOM05D005899 ORTHO05D007445 2.8e-110 402.5 291 66.3
Lalb_Chr15g0076871 Lupinus albus HOM05D005899 ORTHO05D007445 3.7e-110 402.1 301 64.5
PSO761G0524 Papaver somniferum HOM05D005899 ORTHO05D007445 1.1e-109 400.6 294 66.0
Psat0s62g0080 Pisum sativum HOM05D005899 ORTHO05D007445 1.8e-109 399.8 291 64.6
THA.LOC104802822 Tarenaya hassleriana HOM05D005899 ORTHO05D007445 1.6e-108 396.7 300 63.3
ATR0681G168 Amborella trichopoda HOM05D005899 ORTHO05D007445 2.0e-108 396.4 290 65.2
Cpa.g.sc117.66 Carica papaya HOM05D005899 ORTHO05D007445 2.0e-108 396.4 294 65.0
HanXRQChr02g0057281 Helianthus annuus HOM05D005899 ORTHO05D007445 2.0e-108 396.4 293 64.5
Potri.005G050600 Populus trichocarpa HOM05D005899 ORTHO05D007445 2.3e-107 392.9 303 62.4
EL10Ac4g09173 Beta vulgaris HOM05D005899 ORTHO05D007445 5.0e-107 391.7 298 63.1
PGR083G2155 Punica granatum HOM05D005899 ORTHO05D007445 8.6e-107 391.0 295 64.7
Sabra15G0068500 Salix brachista HOM05D005899 ORTHO05D007445 1.5e-106 390.2 302 63.2
Eucgr.L01763 Eucalyptus grandis HOM05D005899 ORTHO05D007445 3.3e-106 389.0 294 64.3
FAN05G2237 Fragaria x ananassa HOM05D005899 ORTHO05D007445 5.5e-106 388.3 292 64.4
HPP92_023141 Vanilla planifolia HOM05D005899 ORTHO05D007445 2.8e-105 386.0 291 64.9
AUR62000983 Chenopodium quinoa HOM05D005899 ORTHO05D007445 1.0e-104 384.0 288 64.2
Sp3g03700 Schrenkiella parvula HOM05D005899 ORTHO05D007445 5.2e-104 381.7 297 64.3
Sc13g0006240 Simmondsia chinensis HOM05D005899 ORTHO05D007445 6.8e-104 381.3 296 63.5
SHI18352 Sapria himalayana HOM05D005899 ORTHO05D007445 1.2e-103 380.6 301 61.5
CAN.G134.162 Capsicum annuum HOM05D005899 ORTHO05D007445 4.4e-103 378.6 297 64.6
QL03p024564 Quercus lobata HOM05D005899 ORTHO05D007445 7.5e-103 377.9 291 62.2
SEGI_33796 Sequoiadendron giganteum HOM05D005899 ORTHO05D007445 1.4e-101 373.6 298 58.7
Cfa006460 Carpinus fangiana HOM05D005899 ORTHO05D007445 9.5e-98 360.9 280 64.3
Os01g0542000 Oryza sativa ssp. japonica HOM05D005899 ORTHO05D007445 6.1e-97 358.2 297 57.6
Zm00001eb162780 Zea mays HOM05D005899 ORTHO05D007445 1.2e-95 354.0 295 56.9
SMO367G0143 Selaginella moellendorffii HOM05D005899 ORTHO05D007445 2.9e-94 349.4 301 57.1
TPR.G8897 Trifolium pratense HOM05D005899 ORTHO05D007445 6.0e-92 341.7 253 64.4
AL3G15170 Arabidopsis lyrata HOM05D005899 ORTHO05D007445 4.0e-88 328.9 230 69.1
Nn4g26305 Nelumbo nucifera HOM05D005899 ORTHO05D007445 2.6e-87 326.2 236 67.4
Sabra15G0041400 Salix brachista HOM05D005899 ORTHO05D007445 1.2e-84 317.4 302 55.0
Atru.chr2.732 Acer truncatum HOM05D005899 ORTHO05D007445 1.6e-81 307.0 229 65.9
Atru.chr2.745 Acer truncatum HOM05D005899 ORTHO05D007445 1.6e-81 307.0 229 65.9
Haze_04330 Corylus avellana HOM05D005899 ORTHO05D007445 7.6e-79 298.1 272 53.7
FAN09G0887 Fragaria x ananassa HOM05D005899 ORTHO05D007445 7.6e-79 298.1 292 53.8
Peaxi162Scf00404g00009 Petunia axillaris HOM05D005899 ORTHO05D007445 1.2e-76 290.8 262 55.7
Pp3c6_4500 Physcomitrium patens HOM05D005899 ORTHO05D007445 2.3e-75 286.6 417 38.8
unitig_744.g24569 Utricularia gibba HOM05D005899 ORTHO05D007445 4.0e-72 275.8 180 76.7
Nitab4.5_0013433g0050 Nicotiana tabacum HOM05D005899 ORTHO05D007445 8.9e-72 274.6 197 65.5
Atru.chr2.742 Acer truncatum HOM05D005899 ORTHO05D007445 3.4e-71 272.7 210 64.8
Eucgr.L02186 Eucalyptus grandis HOM05D005899 ORTHO05D007445 2.9e-70 269.6 292 48.3
Actinidia36917 Actinidia chinensis HOM05D005899 ORTHO05D007445 9.3e-69 264.6 200 66.0
Eucgr.L02099 Eucalyptus grandis HOM05D005899 ORTHO05D007445 7.3e-66 255.0 201 62.2
Eucgr.B01712 Eucalyptus grandis HOM05D005899 ORTHO05D007445 4.8e-65 252.3 292 47.3
Ah.04g162380 Amaranthus hybridus HOM05D005899 ORTHO05D007445 3.3e-58 229.6 165 63.0
BcaNung06538 Brassica carinata HOM05D005899 ORTHO05D007445 1.2e-55 221.1 172 64.5
SGA_v2.0_scaffold31G12627 Striga asiatica HOM05D005899 ORTHO05D007445 2.6e-55 219.9 137 71.5
AUR62004985 Chenopodium quinoa HOM05D005899 ORTHO05D007445 4.5e-55 219.2 254 48.8
Eucgr.B01710 Eucalyptus grandis HOM05D005899 ORTHO05D007445 5.8e-55 218.8 292 43.5
Dinv12477 Davidia involucrata HOM05D005899 ORTHO05D007445 7.9e-52 208.4 129 74.4
Medtr8g098320 Medicago truncatula HOM05D005899 ORTHO05D007445 7.9e-52 208.4 155 66.5
Carub.0003s0407 Capsella rubella HOM05D005899 ORTHO05D007445 2.5e-50 203.4 125 73.6
AUR62004976 Chenopodium quinoa HOM05D005899 ORTHO05D007445 3.4e-47 193.0 155 61.9
Sabra15G0056900 Salix brachista HOM05D005899 ORTHO05D007445 4.6e-44 182.6 124 63.7
Sabra15G0057000 Salix brachista HOM05D005899 ORTHO05D007445 4.6e-44 182.6 124 63.7
Sabra15G0068600 Salix brachista HOM05D005899 ORTHO05D007445 4.6e-44 182.6 124 63.7
FAN05G4786 Fragaria x ananassa HOM05D005899 ORTHO05D007445 7.9e-44 181.8 100 78.0
Medtr7g114730 Medicago truncatula HOM05D005899 ORTHO05D007445 1.3e-43 181.0 156 59.0
FAN05G4109 Fragaria x ananassa HOM05D005899 ORTHO05D007445 3.4e-39 166.4 146 61.0
TPR.G21843 Trifolium pratense HOM05D005899 ORTHO05D007445 4.5e-39 166.0 118 71.2
Cfa006462 Carpinus fangiana HOM05D005899 ORTHO05D007445 5.1e-35 152.5 131 55.0
Carub.0003s0408 Capsella rubella HOM05D005899 ORTHO05D007445 1.4e-29 134.4 98 68.4
unitig_21.g20175 Utricularia gibba HOM05D005899 ORTHO05D007445 6.9e-24 115.5 73 72.6
TAR140G0002 Trochodendron aralioides HOM05D005899 ORTHO05D007445 7.2e-21 105.5 104 52.9
TAR623G1042 Trochodendron aralioides HOM05D005899 ORTHO05D007445 7.2e-21 105.5 104 52.9
TAR636G1090 Trochodendron aralioides HOM05D005899 ORTHO05D007445 7.9e-20 102.1 104 51.9
TAR375G0990 Trochodendron aralioides HOM05D005899 ORTHO05D007445 3.0e-19 100.1 105 52.4
AUR62000980 Chenopodium quinoa HOM05D005899 ORTHO05D007445 5.1e-19 99.4 81 61.7
PRCOL_00001982 Prasinoderma coloniale HOM05D005899 ORTHO05D007445 8.8e-19 98.6 145 37.9
RcHm_v2.0_Chr7g0217791 Rosa chinensis HOM05D005899 ORTHO05D007445 1.1e-18 98.2 142 41.5
TAR625G0400 Trochodendron aralioides HOM05D005899 ORTHO05D007445 2.2e-17 94.0 89 56.2
TAR365G0745 Trochodendron aralioides HOM05D005899 ORTHO05D007445 9.7e-10 68.6 56 60.7
TAR375G0306 Trochodendron aralioides HOM05D005899 ORTHO05D007445 5.9e-07 59.3 58 55.2
FvH4_7g17710 Fragaria vesca HOM05D005899 ORTHO05D045384 7.7e-07 58.9 69 44.9
FvH4_1g21970 Fragaria vesca HOM05D010020 ORTHO05D015123 1.0e-06 58.5 128 34.4
FAN19G2556 Fragaria x ananassa HOM05D010020 ORTHO05D015123 1.0e-06 58.5 128 34.4
FAN06G4129 Fragaria x ananassa HOM05D005899 ORTHO05D045384 1.7e-06 57.8 68 45.6


User provided reference genes

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