Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold50G18457 Striga asiatica HOM05D003818 ORTHO05D004541 6.4e-94 347.4 178 100.0
SGA_v2.0_scaffold59G20747 Striga asiatica HOM05D003818 ORTHO05D004541 6.9e-64 247.7 179 77.1
MSTRG.27132 Avicennia marina HOM05D003818 ORTHO05D004541 5.4e-61 238.0 178 70.8
Oeu061636.1 Olea europaea HOM05D003818 ORTHO05D004541 2.3e-59 232.6 180 72.2
Migut.K00399 Erythranthe guttata HOM05D003818 ORTHO05D004541 3.0e-59 232.3 180 71.7
PGSC0003DMG400008922 Solanum tuberosum HOM05D003818 ORTHO05D004541 3.3e-58 228.8 179 71.5
Cc02_g03330 Coffea canephora HOM05D003818 ORTHO05D004541 5.6e-58 228.0 179 72.1
Solyc09g010500.3 Solanum lycopersicum HOM05D003818 ORTHO05D004541 9.6e-58 227.3 179 70.9
Sopen09g005230 Solanum pennellii HOM05D003818 ORTHO05D004541 9.6e-58 227.3 179 70.9
Dinv28474 Davidia involucrata HOM05D003818 ORTHO05D004541 3.1e-56 222.2 180 68.3
HanXRQChr16g0532841 Helianthus annuus HOM05D003818 ORTHO05D004541 9.0e-56 220.7 181 69.1
Dinv35185 Davidia involucrata HOM05D003818 ORTHO05D004541 1.2e-55 220.3 180 68.3
vmacro16312 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 2.4e-53 212.6 169 70.4
QL06p049138 Quercus lobata HOM05D003818 ORTHO05D004541 1.2e-52 210.3 178 67.4
Rhsim03G0177700 Rhododendron simsii HOM05D003818 ORTHO05D004541 1.2e-52 210.3 181 68.0
Nn3g21139 Nelumbo nucifera HOM05D003818 ORTHO05D004541 1.6e-52 209.9 181 67.4
Actinidia31809 Actinidia chinensis HOM05D003818 ORTHO05D004541 2.1e-52 209.5 178 66.9
MBI04_g00300_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 2.7e-52 209.1 181 67.4
Rhsim05G0017100 Rhododendron simsii HOM05D003818 ORTHO05D004541 3.5e-52 208.8 181 66.9
TAR374G0305 Trochodendron aralioides HOM05D003818 ORTHO05D004541 4.6e-52 208.4 180 66.1
Lsat_1_v5_gn_1_9221 Lactuca sativa HOM05D003818 ORTHO05D004541 6.0e-52 208.0 182 65.9
MSTRG.26327 Avicennia marina HOM05D003818 ORTHO05D004541 1.0e-51 207.2 178 66.3
Nitab4.5_0017332g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 1.0e-51 207.2 186 64.5
Manes.06G144400 Manihot esculenta HOM05D003818 ORTHO05D004541 1.8e-51 206.5 182 68.7
HanXRQChr04g0108631 Helianthus annuus HOM05D003818 ORTHO05D004541 3.9e-51 205.3 182 65.4
Zm00001eb219520 Zea mays HOM05D003818 ORTHO05D004541 1.5e-50 203.4 180 68.3
Sabra12G0102700 Salix brachista HOM05D003818 ORTHO05D004541 1.9e-50 203.0 181 66.9
ATR0757G129 Amborella trichopoda HOM05D003818 ORTHO05D004541 2.5e-50 202.6 181 67.4
CiPaw.04G066900 Carya illinoinensis HOM05D003818 ORTHO05D004541 3.3e-50 202.2 179 65.4
Os03g0586600 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 4.3e-50 201.8 178 67.4
MBI07_g30196_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 7.4e-50 201.1 181 66.9
Potri.015G138800 Populus trichocarpa HOM05D003818 ORTHO05D004541 7.4e-50 201.1 182 65.9
Sabra15G0149800 Salix brachista HOM05D003818 ORTHO05D004541 7.4e-50 201.1 182 65.9
GSVIVG01010613001 Vitis vinifera HOM05D003818 ORTHO05D004541 7.4e-50 201.1 181 67.4
Glyma.10G238600 Glycine max HOM05D003818 ORTHO05D004541 9.6e-50 200.7 181 66.3
CSS0048006 Camellia sinensis var. sinensis HOM05D003818 ORTHO05D004541 1.6e-49 199.9 171 66.1
Oeu030115.1 Olea europaea HOM05D003818 ORTHO05D004541 1.6e-49 199.9 180 65.6
Eucgr.H00421 Eucalyptus grandis HOM05D003818 ORTHO05D004541 2.1e-49 199.5 181 64.6
Glyma.20G155900 Glycine max HOM05D003818 ORTHO05D004541 2.1e-49 199.5 181 65.7
TAR375G1045 Trochodendron aralioides HOM05D003818 ORTHO05D004541 2.1e-49 199.5 178 65.7
Manes.14G028600 Manihot esculenta HOM05D003818 ORTHO05D004541 2.8e-49 199.1 182 65.9
Peaxi162Scf00039g01318 Petunia axillaris HOM05D003818 ORTHO05D004541 3.7e-49 198.7 178 64.6
RcHm_v2.0_Chr6g0276321 Rosa chinensis HOM05D003818 ORTHO05D004541 3.7e-49 198.7 180 66.1
FAN27G0424 Fragaria x ananassa HOM05D003818 ORTHO05D004541 4.8e-49 198.4 181 66.3
Potri.012G136900 Populus trichocarpa HOM05D003818 ORTHO05D004541 4.8e-49 198.4 180 65.6
PGR102G2559 Punica granatum HOM05D003818 ORTHO05D004541 6.2e-49 198.0 182 65.4
FvH4_2g14180 Fragaria vesca HOM05D003818 ORTHO05D004541 8.1e-49 197.6 181 66.3
FAN15G1651 Fragaria x ananassa HOM05D003818 ORTHO05D004541 8.1e-49 197.6 181 66.3
FAN24G1752 Fragaria x ananassa HOM05D003818 ORTHO05D004541 8.1e-49 197.6 181 66.3
Psat3g070640 Pisum sativum HOM05D003818 ORTHO05D004541 1.1e-48 197.2 184 64.1
MD12G1011200 Malus domestica HOM05D003818 ORTHO05D004541 1.4e-48 196.8 182 64.3
VMungo0720G0599 Vigna mungo HOM05D003818 ORTHO05D004541 3.1e-48 195.7 181 66.9
Cpa.g.sc370.10 Carica papaya HOM05D003818 ORTHO05D004541 4.0e-48 195.3 180 63.9
CsaV3_3G016860 Cucumis sativus L. HOM05D003818 ORTHO05D004541 4.0e-48 195.3 180 64.4
Hma1.2p1_0099F.1_g048510 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 4.0e-48 195.3 180 63.3
arahy.Tifrunner.gnm1.ann1.7N83Z4 Arachis hypogaea HOM05D003818 ORTHO05D004541 5.3e-48 194.9 180 64.4
arahy.Tifrunner.gnm1.ann1.Y3E72Q Arachis hypogaea HOM05D003818 ORTHO05D004541 5.3e-48 194.9 180 64.4
Lalb_Chr21g0304961 Lupinus albus HOM05D003818 ORTHO05D004541 5.3e-48 194.9 182 63.2
Phvul.007G066800 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 5.3e-48 194.9 181 65.7
Prupe.3G134400 Prunus persica HOM05D003818 ORTHO05D004541 5.3e-48 194.9 182 63.2
Sed0011620 Sechium edule HOM05D003818 ORTHO05D004541 5.3e-48 194.9 180 65.6
Haze_13747 Corylus avellana HOM05D003818 ORTHO05D004541 6.9e-48 194.5 171 67.8
Phvul.007G009900 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 6.9e-48 194.5 176 64.8
GSVIVG01020800001 Vitis vinifera HOM05D003818 ORTHO05D004541 6.9e-48 194.5 181 65.2
Cfa020017 Carpinus fangiana HOM05D003818 ORTHO05D004541 9.0e-48 194.1 170 67.1
LjContig00564g0007738 Lotus japonicus HOM05D003818 ORTHO05D004541 1.2e-47 193.7 180 64.4
Lj2g0002682 Lotus japonicus HOM05D003818 ORTHO05D004541 1.5e-47 193.4 181 64.1
Medtr0019s0160 Medicago truncatula HOM05D003818 ORTHO05D004541 1.5e-47 193.4 183 63.4
TPR.G3844 Trifolium pratense HOM05D003818 ORTHO05D004541 1.5e-47 193.4 182 64.3
MD17G1234800 Malus domestica HOM05D003818 ORTHO05D004541 3.4e-47 192.2 182 63.2
VMungo0720G0479 Vigna mungo HOM05D001872 ORTHO05D001859 3.4e-47 192.2 178 63.5
Sed0012084 Sechium edule HOM05D003818 ORTHO05D004541 4.5e-47 191.8 180 64.4
TWI23G0179 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 5.8e-47 191.4 182 64.3
DCAR_018174 Daucus carota HOM05D003818 ORTHO05D004541 7.6e-47 191.0 182 62.1
Cfa008286 Carpinus fangiana HOM05D003818 ORTHO05D004541 9.9e-47 190.7 170 67.1
Medtr7g092450 Medicago truncatula HOM05D003818 ORTHO05D004541 9.9e-47 190.7 182 63.7
Gohir.A11G009700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 1.7e-46 189.9 183 65.0
TWI39G1222 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 1.7e-46 189.9 180 64.4
Duzib068G1062 Durio zibethinus HOM05D003818 ORTHO05D004541 2.9e-46 189.1 183 64.5
Haze_20202 Corylus avellana HOM05D003818 ORTHO05D004541 6.4e-46 188.0 215 56.7
Gohir.D11G009000 Gossypium hirsutum HOM05D003818 ORTHO05D004541 6.4e-46 188.0 183 64.5
Gorai.007G010600 Gossypium raimondii HOM05D003818 ORTHO05D004541 6.4e-46 188.0 183 64.5
Peaxi162Scf01172g00037 Petunia axillaris HOM05D003818 ORTHO05D004541 1.4e-45 186.8 173 63.6
THA.LOC104818368 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 1.9e-45 186.4 181 62.4
Aa31LG9G1570 Aethionema arabicum HOM05D003818 ORTHO05D004541 2.4e-45 186.0 183 62.3
Carub.0003s2626 Capsella rubella HOM05D003818 ORTHO05D004541 2.4e-45 186.0 183 61.7
ClCG05G016800 Citrullus lanatus HOM05D002695 ORTHO05D002964 2.4e-45 186.0 168 66.1
Lalb_Chr06g0161031 Lupinus albus HOM05D003818 ORTHO05D004541 2.4e-45 186.0 182 61.5
AL8G26260 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 4.2e-45 185.3 183 61.7
MELO3C006881.2 Cucumis melo HOM05D003818 ORTHO05D004541 4.2e-45 185.3 168 65.5
AT5G51940 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 5.5e-45 184.9 183 61.7
CARHR264880 Cardamine hirsuta HOM05D003818 ORTHO05D004541 7.1e-45 184.5 183 61.7
AL3G42280 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 9.3e-45 184.1 183 61.2
THA.LOC104819386 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 1.6e-44 183.3 182 61.5
Carub.0008s1203 Capsella rubella HOM05D003818 ORTHO05D004541 2.1e-44 183.0 183 61.2
BcaB06g27416 Brassica carinata HOM05D003818 ORTHO05D004541 2.7e-44 182.6 183 61.2
AT2G04630 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 3.5e-44 182.2 183 61.2
BcaC04g23878 Brassica carinata HOM05D003818 ORTHO05D004541 4.6e-44 181.8 183 60.7
A09p03630 Brassica napus HOM05D003818 ORTHO05D004541 4.6e-44 181.8 183 60.7
C09p03860 Brassica napus HOM05D003818 ORTHO05D004541 4.6e-44 181.8 183 60.7
BolC9t53311H Brassica oleracea HOM05D003818 ORTHO05D004541 4.6e-44 181.8 183 60.7
BraA04t16951Z Brassica rapa HOM05D003818 ORTHO05D004541 4.6e-44 181.8 183 61.2
BraA09t36001Z Brassica rapa HOM05D003818 ORTHO05D004541 4.6e-44 181.8 183 60.7
Thhalv10027983m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 6.0e-44 181.4 183 60.1
Lsat_1_v5_gn_3_64081 Lactuca sativa HOM05D003818 ORTHO05D004541 6.0e-44 181.4 179 59.8
BcaB04g19460 Brassica carinata HOM05D003818 ORTHO05D004541 7.9e-44 181.0 183 60.7
Sp7g01990 Schrenkiella parvula HOM05D003818 ORTHO05D004541 7.9e-44 181.0 183 60.7
Thhalv10005087m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 1.0e-43 180.6 183 61.2
Nitab4.5_0006124g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 1.0e-43 180.6 156 66.7
Hund27319 Selenicereus undatus HOM05D003818 ORTHO05D004541 1.0e-43 180.6 180 62.8
A04p12880 Brassica napus HOM05D003818 ORTHO05D004541 1.3e-43 180.3 183 60.7
BolC4t26244H Brassica oleracea HOM05D003818 ORTHO05D004541 1.3e-43 180.3 183 60.7
AUR62004298 Chenopodium quinoa HOM05D003818 ORTHO05D004541 1.3e-43 180.3 180 61.1
C04p46580 Brassica napus HOM05D003818 ORTHO05D004541 1.8e-43 179.9 183 60.7
ECA247G1139 Erigeron canadensis HOM05D003818 ORTHO05D004541 1.8e-43 179.9 179 62.0
Sp2g17150 Schrenkiella parvula HOM05D003818 ORTHO05D004541 1.8e-43 179.9 183 61.2
AUR62022747 Chenopodium quinoa HOM05D003818 ORTHO05D004541 3.0e-43 179.1 180 60.6
Os07g0463100 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 3.9e-43 178.7 178 62.4
unitig_0.g2487 Utricularia gibba HOM05D003818 ORTHO05D004541 3.9e-43 178.7 177 59.9
Duzib084G1211 Durio zibethinus HOM05D003818 ORTHO05D004541 5.1e-43 178.3 181 61.3
Hma1.2p1_0270F.1_g108370 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 5.1e-43 178.3 168 62.5
EL10Ac1g00990 Beta vulgaris HOM05D003818 ORTHO05D004541 1.1e-42 177.2 179 59.8
Thecc.03G171400 Theobroma cacao HOM05D003818 ORTHO05D004541 1.1e-42 177.2 180 60.6
Atru.chr1.512 Acer truncatum HOM05D003818 ORTHO05D004541 1.9e-42 176.4 185 61.1
CDE06G2832 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 4.3e-42 175.3 180 60.6
CsaV3_3G046320 Cucumis sativus L. HOM05D003818 ORTHO05D004541 5.6e-42 174.9 177 60.5
SEGI_10630 Sequoiadendron giganteum HOM05D003818 ORTHO05D004541 7.4e-42 174.5 183 59.0
SalBow5G5531 Salvia bowleyana HOM05D003818 ORTHO05D004541 2.8e-41 172.6 159 64.2
COL.COLO4_14270 Corchorus olitorius HOM05D003818 ORTHO05D004541 3.7e-41 172.2 166 64.5
Gohir.D08G112900 Gossypium hirsutum HOM05D003818 ORTHO05D004541 4.8e-41 171.8 181 59.7
Gorai.004G121300 Gossypium raimondii HOM05D003818 ORTHO05D004541 4.8e-41 171.8 181 59.7
DCAR_009510 Daucus carota HOM05D000059 ORTHO05D000128 6.2e-41 171.4 130 70.8
Gohir.A08G082700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 6.2e-41 171.4 181 59.7
Atru.chr3.2134 Acer truncatum HOM05D003818 ORTHO05D004541 1.1e-40 170.6 182 59.3
Ciclev10006171m.g Citrus clementina HOM05D003818 ORTHO05D004541 1.1e-40 170.6 180 60.0
PSO478G0785 Papaver somniferum HOM05D003818 ORTHO05D004541 2.4e-40 169.5 180 58.9
PSO675G1382 Papaver somniferum HOM05D003818 ORTHO05D004541 2.4e-40 169.5 180 58.9
PSO782G3144 Papaver somniferum HOM05D003818 ORTHO05D004541 2.4e-40 169.5 180 58.9
ClCG05G007860 Citrullus lanatus HOM05D003818 ORTHO05D004541 5.3e-40 168.3 207 53.1
Aqoxy7G00432 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 6.9e-40 167.9 180 60.0
PSO541G1664 Papaver somniferum HOM05D003818 ORTHO05D004541 2.0e-39 166.4 179 58.1
CDE02G0031 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 2.2e-38 162.9 178 57.3
Mapoly0001s0266 Marchantia polymorpha HOM05D003818 ORTHO05D004541 2.2e-38 162.9 181 58.6
Oeu021769.1 Olea europaea HOM05D003818 ORTHO05D004541 3.8e-38 162.2 97 87.6
vmacro06714 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 3.8e-38 162.2 169 60.4
Pp3c16_17050 Physcomitrium patens HOM05D003818 ORTHO05D004541 1.4e-37 160.2 181 56.4
CAN.G97.6 Capsicum annuum HOM05D003818 ORTHO05D004541 2.5e-37 159.5 145 64.8
Oeu021768.1 Olea europaea HOM05D003818 ORTHO05D004541 4.2e-37 158.7 156 61.5
SMO200G0145 Selaginella moellendorffii HOM05D003818 ORTHO05D004541 7.1e-37 157.9 131 64.1
Sc23g0003230 Simmondsia chinensis HOM05D003818 ORTHO05D004541 9.3e-37 157.5 167 58.7
Nitab4.5_0002113g0140 Nicotiana tabacum HOM05D003818 ORTHO05D004541 1.6e-36 156.8 99 83.8
Aqoxy6G01685 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 3.5e-36 155.6 170 58.8
AagrBONN_evm.TU.Sc2ySwM_344.4289 Anthoceros agrestis HOM05D003818 ORTHO05D004541 6.7e-35 151.4 168 54.8
Gohir.D12G260866 Gossypium hirsutum HOM05D003818 ORTHO05D004541 8.7e-35 151.0 169 57.4
Zm00001eb049200 Zea mays HOM05D003818 ORTHO05D004541 8.7e-35 151.0 156 63.5
TAR375G0179 Trochodendron aralioides HOM05D003818 ORTHO05D004541 2.5e-34 149.4 152 61.2
SalBow8G3306 Salvia bowleyana HOM05D003818 ORTHO05D004541 4.3e-34 148.7 98 81.6
SalBow8G5018 Salvia bowleyana HOM05D003818 ORTHO05D004541 4.3e-34 148.7 98 81.6
MD09G1242800 Malus domestica HOM05D003818 ORTHO05D004541 1.6e-33 146.7 127 63.0
CBR_g31915 Chara braunii HOM05D003818 ORTHO05D004541 4.1e-32 142.1 167 52.7
CANSAT56G1911 Cannabis sativa HOM05D003818 ORTHO05D004541 1.0e-30 137.5 155 58.1
Nitab4.5_0002077g0060 Nicotiana tabacum HOM05D003818 ORTHO05D004541 1.1e-29 134.0 178 48.3
Haze_09431 Corylus avellana HOM05D003818 ORTHO05D004541 8.8e-27 124.4 170 49.4
MCO13G124 Micromonas commoda HOM05D003818 ORTHO05D004541 8.8e-27 124.4 118 56.8
Prupe.7G013200 Prunus persica HOM05D003818 ORTHO05D004541 1.4e-24 117.1 109 68.8
Cre01.g002200 Chlamydomonas reinhardtii HOM05D003818 ORTHO05D004541 3.1e-24 115.9 172 48.3
VMungo0647G2358 Vigna mungo HOM05D003818 ORTHO05D004541 9.1e-24 114.4 99 73.7
PRCOL_00007084 Prasinoderma coloniale HOM05D003818 ORTHO05D004541 7.7e-23 111.3 171 46.8
arahy.Tifrunner.gnm1.ann1.36XVJD Arachis hypogaea HOM05D003818 ORTHO05D004541 1.3e-22 110.5 159 49.1
MELO3C003707.2 Cucumis melo HOM05D003818 ORTHO05D004541 7.2e-21 104.8 179 43.0
Haze_26305 Corylus avellana HOM05D003818 ORTHO05D004541 1.2e-20 104.0 105 54.3
TAR374G0228 Trochodendron aralioides HOM05D003818 ORTHO05D004541 4.7e-20 102.1 100 57.0
arahy.Tifrunner.gnm1.ann1.TF2L72 Arachis hypogaea HOM05D003818 ORTHO05D004541 9.7e-18 94.4 83 68.7
arahy.Tifrunner.gnm1.ann1.VWKV4W Arachis hypogaea HOM05D003818 ORTHO05D004541 3.7e-17 92.4 103 60.2
Actinidia03108 Actinidia chinensis HOM05D003818 ORTHO05D054983 6.3e-17 91.7 43 95.3
arahy.Tifrunner.gnm1.ann1.FSRU1U Arachis hypogaea HOM05D003818 ORTHO05D004541 6.3e-17 91.7 82 69.5
Os08g0426000 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D295196 6.9e-16 88.2 75 74.7
arahy.Tifrunner.gnm1.ann1.99YBLU Arachis hypogaea HOM05D003818 ORTHO05D004541 1.5e-15 87.0 168 40.5
AagrBONN_evm.TU.Sc2ySwM_344.4292 Anthoceros agrestis HOM05D003818 ORTHO05D004541 2.6e-15 86.3 124 45.2
arahy.Tifrunner.gnm1.ann1.28837M Arachis hypogaea HOM05D003818 ORTHO05D004541 7.7e-15 84.7 168 38.7
PGR142G2678 Punica granatum HOM05D003818 ORTHO05D004541 1.7e-14 83.6 83 62.7
arahy.Tifrunner.gnm1.ann1.VXTW3V Arachis hypogaea HOM05D003818 ORTHO05D013217 2.2e-09 66.6 35 94.3
DCAR_013632 Daucus carota HOM05D003818 ORTHO05D175173 1.0e-06 57.8 81 45.7


User provided reference genes

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