Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold507G52535 Striga asiatica HOM05D003467 ORTHO05D004220 1.7e-102 375.9 178 100.0
SHI36967 Sapria himalayana HOM05D003467 ORTHO05D004220 1.1e-85 320.1 206 80.1
SHI36996 Sapria himalayana HOM05D003467 ORTHO05D004220 6.2e-81 304.3 212 74.5
SHI43968 Sapria himalayana HOM05D003467 ORTHO05D004220 5.4e-77 291.2 194 77.3
SHI46915 Sapria himalayana HOM05D003467 ORTHO05D004220 3.2e-61 238.8 134 86.6
Sed0002506 Sechium edule HOM05D003467 ORTHO05D004220 6.0e-60 234.6 181 68.0
SHI50250 Sapria himalayana HOM05D003467 ORTHO05D004220 3.0e-59 232.3 210 61.4
SHI52074 Sapria himalayana HOM05D003467 ORTHO05D004220 4.0e-56 221.9 182 68.7
Lj2C1229G12 Lonicera japonica HOM05D003467 ORTHO05D004220 2.9e-54 215.7 166 70.5
SHI37866 Sapria himalayana HOM05D003467 ORTHO05D004220 1.9e-53 213.0 145 77.2
SHI40343 Sapria himalayana HOM05D003467 ORTHO05D004220 1.9e-53 213.0 149 73.8
SHI42055 Sapria himalayana HOM05D003467 ORTHO05D004220 1.9e-53 213.0 149 73.8
SHI52974 Sapria himalayana HOM05D003467 ORTHO05D004220 1.9e-53 213.0 149 73.8
ClCG11G007180 Citrullus lanatus HOM05D003467 ORTHO05D004220 4.2e-53 211.8 166 69.3
SHI37961 Sapria himalayana HOM05D003467 ORTHO05D004220 7.1e-53 211.1 149 73.2
SHI53305 Sapria himalayana HOM05D003467 ORTHO05D004220 9.3e-53 210.7 156 72.4
CANSAT16G0031 Cannabis sativa HOM05D003467 ORTHO05D004220 3.5e-52 208.8 165 69.7
SHI53641 Sapria himalayana HOM05D003467 ORTHO05D004220 4.6e-52 208.4 139 79.1
SHI51351 Sapria himalayana HOM05D003467 ORTHO05D004220 1.0e-51 207.2 127 83.5
SHI52601 Sapria himalayana HOM05D003467 ORTHO05D004220 1.0e-51 207.2 127 83.5
Nn1g10002 Nelumbo nucifera HOM05D003467 ORTHO05D004220 3.9e-51 205.3 166 69.3
SHI38192 Sapria himalayana HOM05D003467 ORTHO05D004220 8.7e-51 204.1 127 82.7
Sed0026029 Sechium edule HOM05D003467 ORTHO05D004220 4.3e-50 201.8 168 66.7
Sed0025530 Sechium edule HOM05D003467 ORTHO05D004220 5.6e-50 201.4 157 70.1
SGA_v2.0_scaffold255G45505 Striga asiatica HOM05D003467 ORTHO05D004220 7.4e-50 201.1 163 66.9
Actinidia34926 Actinidia chinensis HOM05D003467 ORTHO05D004220 2.8e-49 199.1 166 66.3
SHI36699 Sapria himalayana HOM05D003467 ORTHO05D004220 1.8e-48 196.4 159 69.8
SHI37209 Sapria himalayana HOM05D003467 ORTHO05D004220 3.4e-47 192.2 129 79.1
Solyc00g500228.1 Solanum lycopersicum HOM05D003467 ORTHO05D004220 1.7e-46 189.9 166 65.7
SHI48358 Sapria himalayana HOM05D003467 ORTHO05D004220 1.1e-45 187.2 158 66.5
Peaxi162Scf00197g00034 Petunia axillaris HOM05D003467 ORTHO05D004220 1.4e-45 186.8 168 64.3
CsaV3_UNG208190 Cucumis sativus L. HOM05D003467 ORTHO05D004220 2.4e-45 186.0 169 63.9
MBI05_g05352_MAGBIO Magnolia biondii HOM05D003467 ORTHO05D004220 3.2e-45 185.7 205 55.1
Sopen05g012590 Solanum pennellii HOM05D003467 ORTHO05D004220 4.2e-45 185.3 167 64.7
SabraMtG0006300 Salix brachista HOM05D003467 ORTHO05D004220 5.5e-45 184.9 175 64.0
SHI38898 Sapria himalayana HOM05D003467 ORTHO05D004220 9.3e-45 184.1 138 72.5
Nitab4.5_0009709g0060 Nicotiana tabacum HOM05D003467 ORTHO05D004220 1.2e-44 183.7 167 62.3
SHI38317 Sapria himalayana HOM05D003467 ORTHO05D004220 7.9e-44 181.0 129 75.2
Dinv06674 Davidia involucrata HOM05D003467 ORTHO05D004220 1.3e-43 180.3 141 69.5
Peaxi162Scf00507g00009 Petunia axillaris HOM05D003467 ORTHO05D004220 3.0e-43 179.1 164 62.2
Rhsim07G0055600 Rhododendron simsii HOM05D003467 ORTHO05D004220 6.7e-43 177.9 165 61.2
SHI52008 Sapria himalayana HOM05D003467 ORTHO05D004220 8.7e-43 177.6 150 66.7
Nitab4.5_0004471g0080 Nicotiana tabacum HOM05D003467 ORTHO05D004220 1.9e-42 176.4 166 61.4
SHI37886 Sapria himalayana HOM05D003467 ORTHO05D004220 1.6e-41 173.3 120 79.2
SHI52904 Sapria himalayana HOM05D003467 ORTHO05D004220 2.1e-41 172.9 97 89.7
Oeu039080.1 Olea europaea HOM05D003467 ORTHO05D004220 3.7e-41 172.2 157 63.7
MBI16_g09480_MAGBIO Magnolia biondii HOM05D003467 ORTHO05D004220 4.8e-41 171.8 206 52.9
CAN.G502.14 Capsicum annuum HOM05D003467 ORTHO05D004220 6.2e-41 171.4 167 59.9
Sopen06g007650 Solanum pennellii HOM05D003467 ORTHO05D004220 6.2e-41 171.4 167 59.3
Nitab4.5_0001796g0090 Nicotiana tabacum HOM05D003467 ORTHO05D004220 3.1e-40 169.1 183 56.8
Nitab4.5_0001152g0330 Nicotiana tabacum HOM05D003467 ORTHO05D004220 9.0e-40 167.5 163 59.5
Solyc00g500103.1 Solanum lycopersicum HOM05D003467 ORTHO05D004220 2.9e-38 162.5 142 64.8
BcaC08g43711 Brassica carinata HOM05D003467 ORTHO05D004220 3.8e-38 162.2 178 57.3
SHI52927 Sapria himalayana HOM05D003467 ORTHO05D004220 3.8e-38 162.2 121 74.4
SHI37556 Sapria himalayana HOM05D003467 ORTHO05D004220 8.4e-38 161.0 148 62.8
unitig_87.g27965 Utricularia gibba HOM05D003467 ORTHO05D004220 1.1e-37 160.6 165 59.4
CARHR282930 Cardamine hirsuta HOM05D003467 ORTHO05D004220 3.2e-37 159.1 174 57.5
ATMG00560 Arabidopsis thaliana HOM05D003467 ORTHO05D004220 7.1e-37 157.9 178 56.7
BNapus_Darmor_BZH_scaffold_234p00200 Brassica napus HOM05D003467 ORTHO05D004220 7.9e-36 154.5 174 56.3
BolSC28t60347H Brassica oleracea HOM05D003467 ORTHO05D004220 7.9e-36 154.5 174 56.3
BraSC48t46273Z Brassica rapa HOM05D003467 ORTHO05D004220 7.9e-36 154.5 174 56.3
Sp3g25530 Schrenkiella parvula HOM05D003467 ORTHO05D004220 7.9e-36 154.5 174 56.3
AL3G44370 Arabidopsis lyrata HOM05D003467 ORTHO05D004220 3.0e-35 152.5 174 56.3
AT2G07715 Arabidopsis thaliana HOM05D003467 ORTHO05D004220 1.5e-34 150.2 174 55.7
SHI44578 Sapria himalayana HOM05D003467 ORTHO05D004220 3.3e-34 149.1 87 83.9
CAN.G1.25 Capsicum annuum HOM05D003467 ORTHO05D004220 9.7e-34 147.5 155 56.1
CDE02G2877 Ceratophyllum demersum HOM05D003467 ORTHO05D004220 2.2e-33 146.4 137 60.6
SHI42501 Sapria himalayana HOM05D003467 ORTHO05D004220 3.7e-33 145.6 115 66.1
CAN.G134.20 Capsicum annuum HOM05D003467 ORTHO05D004220 6.3e-33 144.8 153 54.9
SHI51177 Sapria himalayana HOM05D003467 ORTHO05D004220 6.3e-33 144.8 78 88.5
Aa31csc239G20 Aethionema arabicum HOM05D003467 ORTHO05D004220 8.2e-33 144.4 179 54.2
Thhalv10013769m.g Eutrema salsugineum HOM05D003467 ORTHO05D004220 5.3e-32 141.7 174 53.4
SHI38986 Sapria himalayana HOM05D003467 ORTHO05D004220 9.0e-32 141.0 88 83.0
SHI34612 Sapria himalayana HOM05D003467 ORTHO05D004220 5.0e-30 135.2 73 90.4
C09p21580 Brassica napus HOM05D003467 ORTHO05D004220 3.2e-29 132.5 101 71.3
SHI37879 Sapria himalayana HOM05D003467 ORTHO05D004220 4.2e-29 132.1 145 57.9
SHI38047 Sapria himalayana HOM05D003467 ORTHO05D004220 5.5e-29 131.7 145 57.9
BolC9t55063H Brassica oleracea HOM05D003467 ORTHO05D004220 1.2e-28 130.6 165 53.3
BraSC77t46654Z Brassica rapa HOM05D003467 ORTHO05D004220 1.2e-28 130.6 161 52.8
Ciclev10005397m.g Citrus clementina HOM05D003467 ORTHO05D004220 7.9e-28 127.9 130 52.3
Nitab4.5_0012067g0060 Nicotiana tabacum HOM05D003467 ORTHO05D004220 2.3e-27 126.3 112 61.6
Nitab4.5_0002635g0050 Nicotiana tabacum HOM05D003467 ORTHO05D004220 2.2e-25 119.8 98 70.4
SHI37826 Sapria himalayana HOM05D003467 ORTHO05D004220 1.1e-24 117.5 78 78.2
CDE02G4335 Ceratophyllum demersum HOM05D003467 ORTHO05D004220 3.4e-23 112.5 68 80.9
SGA_v2.0_scaffold48G17845 Striga asiatica HOM05D003467 ORTHO05D004220 3.4e-23 112.5 55 94.5
Atru.chr10.2291 Acer truncatum HOM05D003467 ORTHO05D004220 2.2e-22 109.8 100 64.0
SHI47987 Sapria himalayana HOM05D003467 ORTHO05D020467 2.9e-22 109.4 53 90.6
BolC4t23495H Brassica oleracea HOM05D003467 ORTHO05D004220 7.9e-20 101.3 122 54.1
SHI54334 Sapria himalayana HOM05D003467 ORTHO05D004220 7.9e-20 101.3 108 56.5
CAN.G676.26 Capsicum annuum HOM05D003467 ORTHO05D004220 5.1e-19 98.6 110 58.2
Nitab4.5_0006602g0040 Nicotiana tabacum HOM05D003467 ORTHO05D004220 6.7e-19 98.2 128 49.2
ATR0661G353 Amborella trichopoda HOM05D003467 ORTHO05D004220 7.4e-18 94.7 166 42.8
Manes.02G141800 Manihot esculenta HOM05D003467 ORTHO05D004220 2.4e-16 89.7 135 42.2
Nitab4.5_0008578g0020 Nicotiana tabacum HOM05D003467 ORTHO05D004220 1.5e-15 87.0 60 76.7
Solyc08g022180.1 Solanum lycopersicum HOM05D005034 ORTHO05D006234 1.5e-15 87.0 99 51.5
Sc16g0002730 Simmondsia chinensis HOM05D003467 ORTHO05D004220 7.7e-15 84.7 116 43.1
BcaC05g26882 Brassica carinata HOM05D003467 ORTHO05D004220 3.8e-14 82.4 127 44.1
ATR0660G010 Amborella trichopoda HOM05D003467 ORTHO05D004220 5.0e-14 82.0 107 49.5
Nitab4.5_0000978g0040 Nicotiana tabacum HOM05D003467 ORTHO05D004220 2.5e-13 79.7 53 75.5
Aqoxy4G00639 Aquilegia oxysepala HOM05D003467 ORTHO05D004220 5.5e-13 78.6 122 41.0
CAN.G1447.9 Capsicum annuum HOM05D003467 ORTHO05D004220 7.2e-13 78.2 54 75.9
Manes.01G181900 Manihot esculenta HOM05D003467 ORTHO05D004220 7.2e-13 78.2 55 65.5
ECA238G4840 Erigeron canadensis HOM05D000460 ORTHO05D000333 2.3e-11 73.2 120 40.0
Hund13975 Selenicereus undatus HOM05D003467 ORTHO05D004220 3.0e-11 72.8 69 52.2
Lsat_1_v5_gn_6_32340 Lactuca sativa HOM05D003467 ORTHO05D004220 6.7e-11 71.6 96 42.7
SalBow7G2519 Salvia bowleyana HOM05D003467 ORTHO05D004220 1.5e-10 70.5 155 37.4
SalBow7G4829 Salvia bowleyana HOM05D003467 ORTHO05D004220 1.5e-10 70.5 155 37.4
EL10Ac6g15561 Beta vulgaris HOM05D003467 ORTHO05D004220 2.0e-10 70.1 97 41.2
BcaC05g26874 Brassica carinata HOM05D003467 ORTHO05D004220 2.0e-10 70.1 63 65.1
Migut.N03022 Erythranthe guttata HOM05D003467 ORTHO05D004220 7.4e-10 68.2 87 47.1
SHI13008 Sapria himalayana HOM05D003467 ORTHO05D004220 1.7e-09 67.0 47 68.1
HanXRQChr14g0459301 Helianthus annuus HOM05D003467 ORTHO05D004220 2.2e-09 66.6 96 39.6
Lsat_1_v5_gn_1_109980 Lactuca sativa HOM05D003467 ORTHO05D004220 2.2e-09 66.6 96 39.6
SalBow1G2953 Salvia bowleyana HOM05D003467 ORTHO05D004220 2.8e-09 66.2 155 36.1
Lsat_1_v5_gn_2_118881 Lactuca sativa HOM05D003467 ORTHO05D004220 3.7e-09 65.9 96 41.7
AUR62004052 Chenopodium quinoa HOM05D003467 ORTHO05D004220 4.8e-09 65.5 97 38.1
SalBow1G5399 Salvia bowleyana HOM05D003467 ORTHO05D004220 4.8e-09 65.5 111 41.4
AUR62007567 Chenopodium quinoa HOM05D003467 ORTHO05D004220 8.2e-09 64.7 97 38.1
Lsat_1_v5_gn_5_114100 Lactuca sativa HOM05D003467 ORTHO05D004220 1.8e-08 63.5 96 41.7
SalBow1G6425 Salvia bowleyana HOM05D003467 ORTHO05D004220 3.1e-08 62.8 155 34.8
Nitab4.5_0004099g0010 Nicotiana tabacum HOM05D003467 ORTHO05D004220 7.0e-08 61.6 58 62.1
SHI38787 Sapria himalayana HOM05D003467 ORTHO05D020467 7.0e-08 61.6 44 63.6
Zm00001eb180350 Zea mays HOM05D000540 ORTHO05D000681 7.0e-08 61.6 48 58.3
ClCG11G007190 Citrullus lanatus HOM05D003467 ORTHO05D020467 1.6e-07 60.5 38 73.7
Ah.04g149890 Amaranthus hybridus HOM05D003467 ORTHO05D004220 2.6e-07 59.7 97 34.0
PGSC0003DMG401008792 Solanum tuberosum HOM05D003467 ORTHO05D004220 6.5e-06 55.1 40 72.5


User provided reference genes

Program Settings