Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4G02391 Striga asiatica HOM05D001429 ORTHO05D001420 1.8e-85 319.3 174 100.0
SGA_v2.0_scaffold104G30211 Striga asiatica HOM05D001429 ORTHO05D001420 1.8e-24 116.7 63 95.2
SGA_v2.0_scaffold199G41235 Striga asiatica HOM05D001429 ORTHO05D001420 3.7e-14 82.4 59 78.0
Migut.A01034 Erythranthe guttata HOM05D001429 ORTHO05D001420 1.0e-11 74.3 67 67.2
Prupe.2G132500 Prunus persica HOM05D001429 ORTHO05D001420 5.0e-11 72.0 65 67.7
QL04p030014 Quercus lobata HOM05D001429 ORTHO05D001420 1.5e-10 70.5 71 62.0
MD07G1109500 Malus domestica HOM05D001429 ORTHO05D001420 7.3e-10 68.2 66 65.2
Oeu031157.1 Olea europaea HOM05D001429 ORTHO05D001420 1.2e-09 67.4 65 61.5
Dinv43611 Davidia involucrata HOM05D001429 ORTHO05D001420 2.1e-09 66.6 63 58.7
vmacro13501 Vaccinium macrocarpon HOM05D001429 ORTHO05D001420 2.1e-09 66.6 63 58.7
Dinv44058 Davidia involucrata HOM05D001429 ORTHO05D001420 3.6e-09 65.9 63 55.6
Migut.A01037 Erythranthe guttata HOM05D001429 ORTHO05D001420 3.6e-09 65.9 63 63.5
Rhsim07G0036400 Rhododendron simsii HOM05D001429 ORTHO05D001420 4.7e-09 65.5 63 57.1
Cpa.g.sc672.2 Carica papaya HOM05D001429 ORTHO05D001420 8.0e-09 64.7 63 58.7
MELO3C022289.2 Cucumis melo HOM05D001429 ORTHO05D001420 1.1e-08 64.3 72 55.6
TAR629G2824 Trochodendron aralioides HOM05D001429 ORTHO05D001420 1.1e-08 64.3 63 58.7
SalBow5G2230 Salvia bowleyana HOM05D001429 ORTHO05D001420 2.3e-08 63.2 63 58.7
ClCG06G002440 Citrullus lanatus HOM05D001429 ORTHO05D001420 3.1e-08 62.8 67 58.2
MD02G1213500 Malus domestica HOM05D001429 ORTHO05D001420 3.1e-08 62.8 71 56.3
Sed0000430 Sechium edule HOM05D001429 ORTHO05D001420 4.0e-08 62.4 65 56.9
Sed0019221 Sechium edule HOM05D001429 ORTHO05D001420 4.0e-08 62.4 65 56.9
CsaV3_6G008700 Cucumis sativus L. HOM05D001429 ORTHO05D001420 5.2e-08 62.0 67 58.2
FvH4_7g10280 Fragaria vesca HOM05D001429 ORTHO05D001420 5.2e-08 62.0 63 61.9
FAN01G0869 Fragaria x ananassa HOM05D001429 ORTHO05D001420 5.2e-08 62.0 63 61.9
FAN10G2227 Fragaria x ananassa HOM05D001429 ORTHO05D001420 5.2e-08 62.0 63 61.9
FAN10G3725 Fragaria x ananassa HOM05D001429 ORTHO05D001420 5.2e-08 62.0 63 61.9
RcHm_v2.0_Chr1g0348031 Rosa chinensis HOM05D001429 ORTHO05D001420 5.2e-08 62.0 83 49.4
Actinidia18351 Actinidia chinensis HOM05D001429 ORTHO05D001420 6.8e-08 61.6 63 57.1
Eucgr.D02118 Eucalyptus grandis HOM05D001429 ORTHO05D001420 6.8e-08 61.6 68 55.9
FAN06G0752 Fragaria x ananassa HOM05D001429 ORTHO05D001420 8.9e-08 61.2 63 61.9
CsaV3_6G008690 Cucumis sativus L. HOM05D001429 ORTHO05D001420 1.2e-07 60.8 66 56.1
MSTRG.20686 Avicennia marina HOM05D001429 ORTHO05D001420 1.5e-07 60.5 69 52.2
MSTRG.4933 Avicennia marina HOM05D001429 ORTHO05D001420 1.5e-07 60.5 68 54.4
FAN06G2226 Fragaria x ananassa HOM05D001429 ORTHO05D001420 1.5e-07 60.5 62 61.3
Gohir.A08G029201 Gossypium hirsutum HOM05D001429 ORTHO05D001420 1.5e-07 60.5 65 56.9
TAR375G0305 Trochodendron aralioides HOM05D001429 ORTHO05D001420 1.5e-07 60.5 63 54.0
vmacro21064 Vaccinium macrocarpon HOM05D001429 ORTHO05D001420 1.5e-07 60.5 64 62.5
Actinidia21634 Actinidia chinensis HOM05D001429 ORTHO05D001420 2.0e-07 60.1 63 55.6
MSTRG.12141 Avicennia marina HOM05D001429 ORTHO05D001420 2.0e-07 60.1 65 61.5
Sopen08g003170 Solanum pennellii HOM05D001429 ORTHO05D001420 2.0e-07 60.1 64 65.6
Sopen08g003180 Solanum pennellii HOM05D001429 ORTHO05D001420 2.0e-07 60.1 64 65.6
Actinidia12643 Actinidia chinensis HOM05D001429 ORTHO05D001420 2.6e-07 59.7 64 57.8
CSS0018232 Camellia sinensis var. sinensis HOM05D001429 ORTHO05D001420 2.6e-07 59.7 63 57.1
CSS0024114 Camellia sinensis var. sinensis HOM05D001429 ORTHO05D001420 2.6e-07 59.7 63 57.1
Cpa.g.sc22.60 Carica papaya HOM05D001429 ORTHO05D001420 2.6e-07 59.7 65 58.5
FAN03G2297 Fragaria x ananassa HOM05D001429 ORTHO05D001420 2.6e-07 59.7 63 60.3
Gohir.D08G039900 Gossypium hirsutum HOM05D001429 ORTHO05D001420 2.6e-07 59.7 65 55.4
Gorai.004G038700 Gossypium raimondii HOM05D001429 ORTHO05D001420 2.6e-07 59.7 65 55.4
SGA_v2.0_scaffold116G32282 Striga asiatica HOM05D001429 ORTHO05D001420 2.6e-07 59.7 63 54.0
unitig_750.g28411 Utricularia gibba HOM05D001429 ORTHO05D001420 2.6e-07 59.7 67 53.7
Duzib268G0869 Durio zibethinus HOM05D001429 ORTHO05D001420 3.4e-07 59.3 72 52.8
Manes.01G274200 Manihot esculenta HOM05D001429 ORTHO05D001420 3.4e-07 59.3 66 53.0
TAR374G1144 Trochodendron aralioides HOM05D001429 ORTHO05D001420 3.4e-07 59.3 69 55.1
GSVIVG01002125001 Vitis vinifera HOM05D001429 ORTHO05D001420 3.4e-07 59.3 69 55.1
Actinidia12142 Actinidia chinensis HOM05D001429 ORTHO05D001420 5.8e-07 58.5 67 50.7
CDE02G0684 Ceratophyllum demersum HOM05D001429 ORTHO05D001420 5.8e-07 58.5 63 52.4
CDE11G0377 Ceratophyllum demersum HOM05D001429 ORTHO05D001420 7.5e-07 58.2 62 50.0
Haze_02853 Corylus avellana HOM05D001429 ORTHO05D001420 7.5e-07 58.2 70 55.7
Lsat_1_v5_gn_6_94060 Lactuca sativa HOM05D001429 ORTHO05D001420 7.5e-07 58.2 63 54.0
Nitab4.5_0000506g0020 Nicotiana tabacum HOM05D001429 ORTHO05D001420 7.5e-07 58.2 64 57.8
Oeu045667.1 Olea europaea HOM05D001429 ORTHO05D001420 7.5e-07 58.2 66 56.1
DCAR_025063 Daucus carota HOM05D001429 ORTHO05D001420 9.8e-07 57.8 63 58.7
CSS0006185 Camellia sinensis var. sinensis HOM05D001429 ORTHO05D001420 1.3e-06 57.4 64 54.7
Glyma.09G243200 Glycine max HOM05D001429 ORTHO05D001420 1.3e-06 57.4 63 57.1
Hma1.2p1_2756F.1_g328020 Hydrangea macrophylla HOM05D001429 ORTHO05D001420 1.3e-06 57.4 66 53.0
Lsat_1_v5_gn_6_68740 Lactuca sativa HOM05D001429 ORTHO05D001420 1.3e-06 57.4 63 55.6
Manes.01G086200 Manihot esculenta HOM05D001429 ORTHO05D001420 1.3e-06 57.4 67 56.7
Oeu040197.1 Olea europaea HOM05D001429 ORTHO05D001420 1.3e-06 57.4 66 54.5
Oeu040683.3 Olea europaea HOM05D001429 ORTHO05D001420 1.3e-06 57.4 65 52.3
Cfa011064 Carpinus fangiana HOM05D001429 ORTHO05D001420 1.7e-06 57.0 68 50.0
Oeu018042.1 Olea europaea HOM05D001429 ORTHO05D001420 1.7e-06 57.0 86 44.2
Actinidia27543 Actinidia chinensis HOM05D001429 ORTHO05D001420 2.2e-06 56.6 63 54.0
Cc00_g26000 Coffea canephora HOM05D001429 ORTHO05D001420 2.2e-06 56.6 63 54.0
ECA236G2353 Erigeron canadensis HOM05D001429 ORTHO05D001420 2.2e-06 56.6 64 57.8
Gorai.004G166300 Gossypium raimondii HOM05D001429 ORTHO05D001420 2.2e-06 56.6 69 55.1
PGSC0003DMG400020488 Solanum tuberosum HOM05D001429 ORTHO05D001420 2.2e-06 56.6 63 58.7
Gohir.D08G160100 Gossypium hirsutum HOM05D001429 ORTHO05D001420 2.9e-06 56.2 69 55.1
Lj2C226G6 Lonicera japonica HOM05D001429 ORTHO05D001420 2.9e-06 56.2 63 57.1
Oeu037449.2 Olea europaea HOM05D001429 ORTHO05D001420 2.9e-06 56.2 64 50.0
Ah.05g177950 Amaranthus hybridus HOM05D001429 ORTHO05D001420 3.7e-06 55.8 68 51.5
MD06G1049800 Malus domestica HOM05D001429 ORTHO05D001420 3.7e-06 55.8 63 54.0
Oeu011237.1 Olea europaea HOM05D001429 ORTHO05D001420 3.7e-06 55.8 66 56.1
PGR031G0446 Punica granatum HOM05D001429 ORTHO05D001420 3.7e-06 55.8 66 54.5
TWI23G0570 Tripterygium wilfordii HOM05D001429 ORTHO05D001420 3.7e-06 55.8 72 58.3
Sabra14G0035100 Salix brachista HOM05D001429 ORTHO05D001420 4.9e-06 55.5 67 58.2
CAN.G761.26 Capsicum annuum HOM05D001429 ORTHO05D001420 6.4e-06 55.1 68 55.9
Lalb_Chr13g0290621 Lupinus albus HOM05D001429 ORTHO05D001420 6.4e-06 55.1 63 54.0
Oeu020083.3 Olea europaea HOM05D001429 ORTHO05D001420 6.4e-06 55.1 64 54.7
VMungo1383G0355 Vigna mungo HOM05D001429 ORTHO05D001420 6.4e-06 55.1 63 54.0
CSS0038516 Camellia sinensis var. sinensis HOM05D001429 ORTHO05D001420 8.3e-06 54.7 63 52.4
HanXRQChr16g0510681 Helianthus annuus HOM05D001429 ORTHO05D001420 8.3e-06 54.7 73 49.3
Hund17103 Selenicereus undatus HOM05D001429 ORTHO05D001420 8.3e-06 54.7 68 48.5
Sc26g0001630 Simmondsia chinensis HOM05D001429 ORTHO05D001420 8.3e-06 54.7 63 54.0
TPR.G28792 Trifolium pratense HOM05D001429 ORTHO05D001420 8.3e-06 54.7 69 52.2


User provided reference genes

Program Settings