Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4G02313 Striga asiatica HOM05D005648 ORTHO05D007357 6.2e-200 700.7 374 100.0
MSTRG.20835 Avicennia marina HOM05D005648 ORTHO05D007357 4.0e-114 415.6 373 64.6
Migut.B01757 Erythranthe guttata HOM05D005648 ORTHO05D007357 5.2e-114 415.2 375 62.9
Oeu010615.1 Olea europaea HOM05D005648 ORTHO05D007357 1.9e-92 343.6 379 55.1
QL08p048767 Quercus lobata HOM05D005648 ORTHO05D007357 1.0e-69 268.1 375 46.4
Prupe.2G170800 Prunus persica HOM05D005648 ORTHO05D007357 1.3e-67 261.2 379 47.0
Haze_07444 Corylus avellana HOM05D005648 ORTHO05D007357 2.8e-67 260.0 392 45.2
Rhsim01G0157500 Rhododendron simsii HOM05D005648 ORTHO05D007357 8.2e-67 258.5 386 46.9
COL.COLO4_12714 Corchorus olitorius HOM05D005648 ORTHO05D007357 2.4e-66 256.9 384 45.6
Manes.05G034000 Manihot esculenta HOM05D005648 ORTHO05D007357 4.0e-66 256.1 379 45.6
Potri.002G160100 Populus trichocarpa HOM05D005648 ORTHO05D007357 2.6e-65 253.4 381 45.7
Thecc.01G358800 Theobroma cacao HOM05D005648 ORTHO05D007357 5.8e-65 252.3 376 44.9
Sabra14G0061500 Salix brachista HOM05D005648 ORTHO05D007357 4.9e-64 249.2 407 43.0
Potri.014G084800 Populus trichocarpa HOM05D005648 ORTHO05D007357 3.2e-63 246.5 382 46.1
Manes.01G256501 Manihot esculenta HOM05D005648 ORTHO05D007357 1.8e-61 240.7 379 43.5
Peaxi162Scf00020g00424 Petunia axillaris HOM05D005648 ORTHO05D007357 6.7e-61 238.8 431 41.1
Atru.chr5.500 Acer truncatum HOM05D005648 ORTHO05D007357 3.3e-60 236.5 333 45.9
HanXRQChr16g0522761 Helianthus annuus HOM05D005648 ORTHO05D007357 7.4e-60 235.3 369 44.2
FAN10G1032 Fragaria x ananassa HOM05D005648 ORTHO05D007357 2.8e-59 233.4 444 40.8
FvH4_7g14300 Fragaria vesca HOM05D005648 ORTHO05D007357 1.8e-58 230.7 442 40.0
Gorai.004G158700 Gossypium raimondii HOM05D005648 ORTHO05D007357 1.8e-58 230.7 376 42.3
MD01G1061000 Malus domestica HOM05D005648 ORTHO05D007357 1.8e-58 230.7 377 42.4
Gohir.D08G152800 Gossypium hirsutum HOM05D005648 ORTHO05D007357 5.3e-58 229.2 379 42.2
Dinv32486 Davidia involucrata HOM05D005648 ORTHO05D007357 1.2e-57 228.0 374 43.6
FAN06G4900 Fragaria x ananassa HOM05D005648 ORTHO05D007357 1.2e-57 228.0 444 39.2
Lsat_1_v5_gn_4_36080 Lactuca sativa HOM05D005648 ORTHO05D007357 1.2e-57 228.0 384 42.4
FAN06G1011 Fragaria x ananassa HOM05D005648 ORTHO05D007357 2.6e-57 226.9 442 39.6
PGR031G0771 Punica granatum HOM05D005648 ORTHO05D007357 2.6e-57 226.9 381 39.9
Gohir.A08G131300 Gossypium hirsutum HOM05D005648 ORTHO05D007357 4.5e-57 226.1 376 42.0
MD07G1136800 Malus domestica HOM05D005648 ORTHO05D007357 5.9e-57 225.7 399 41.1
TAR375G0141 Trochodendron aralioides HOM05D005648 ORTHO05D007357 5.9e-57 225.7 380 42.4
Duzib133G0061 Durio zibethinus HOM05D005648 ORTHO05D007357 1.3e-56 224.6 390 42.8
Glyma.07G070400 Glycine max HOM05D005648 ORTHO05D007357 1.3e-56 224.6 377 41.4
MBI18_g45368_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 3.8e-56 223.0 259 52.1
Nn1g01539 Nelumbo nucifera HOM05D005648 ORTHO05D007357 5.0e-56 222.6 403 41.7
RcHm_v2.0_Chr1g0355291 Rosa chinensis HOM05D005648 ORTHO05D007357 6.5e-56 222.2 432 39.4
TWI23G0553 Tripterygium wilfordii HOM05D005648 ORTHO05D007357 1.4e-55 221.1 377 42.7
FAN01G1827 Fragaria x ananassa HOM05D005648 ORTHO05D007357 1.6e-54 217.6 442 39.6
TAR629G3222 Trochodendron aralioides HOM05D005648 ORTHO05D007357 2.1e-54 217.2 295 49.2
CAN.G78.81 Capsicum annuum HOM05D005648 ORTHO05D007357 3.6e-54 216.5 376 40.7
Nitab4.5_0006762g0020 Nicotiana tabacum HOM05D005648 ORTHO05D007357 1.4e-53 214.5 379 39.6
DCAR_006931 Daucus carota HOM05D005648 ORTHO05D007357 2.3e-53 213.8 385 40.8
Ciclev10024354m.g Citrus clementina HOM05D005648 ORTHO05D007357 1.7e-51 207.6 251 49.4
Lj3g0021061 Lotus japonicus HOM05D005648 ORTHO05D007357 4.8e-51 206.1 380 40.8
Aqoxy7G00304 Aquilegia oxysepala HOM05D005648 ORTHO05D007357 1.1e-50 204.9 388 40.5
Solyc01g094650.4 Solanum lycopersicum HOM05D005648 ORTHO05D007357 1.8e-50 204.1 419 37.5
Sopen01g038460 Solanum pennellii HOM05D005648 ORTHO05D007357 1.8e-50 204.1 419 37.2
Cfa019074 Carpinus fangiana HOM05D005648 ORTHO05D007357 2.4e-50 203.8 333 43.2
Cpa.g.sc11.6 Carica papaya HOM05D005648 ORTHO05D007357 5.3e-50 202.6 277 48.4
Thhalv10007771m.g Eutrema salsugineum HOM05D005648 ORTHO05D007357 1.2e-49 201.4 400 39.0
Dinv43819 Davidia involucrata HOM05D005648 ORTHO05D007357 2.0e-49 200.7 380 39.7
VMungo0331G0956 Vigna mungo HOM05D005648 ORTHO05D007357 3.4e-49 199.9 393 38.9
THA.LOC104825838 Tarenaya hassleriana HOM05D005648 ORTHO05D007357 4.5e-49 199.5 413 38.0
Eucgr.D02293 Eucalyptus grandis HOM05D005648 ORTHO05D007357 1.0e-48 198.4 261 48.7
arahy.Tifrunner.gnm1.ann1.B5LD0B Arachis hypogaea HOM05D005648 ORTHO05D007357 1.7e-48 197.6 379 39.3
Sed0027842 Sechium edule HOM05D005648 ORTHO05D007357 1.7e-48 197.6 393 36.9
GSVIVG01026935001 Vitis vinifera HOM05D005648 ORTHO05D007357 1.7e-48 197.6 382 41.6
CiPaw.11G030900 Carya illinoinensis HOM05D005648 ORTHO05D007357 2.9e-48 196.8 374 39.8
Actinidia12702 Actinidia chinensis HOM05D005648 ORTHO05D007357 8.5e-48 195.3 261 48.7
ECA234G0615 Erigeron canadensis HOM05D005648 ORTHO05D007357 1.9e-47 194.1 369 39.0
Cc02_g38050 Coffea canephora HOM05D005648 ORTHO05D007357 3.2e-47 193.4 378 38.9
Phvul.010G099300 Phaseolus vulgaris HOM05D005648 ORTHO05D007357 5.5e-47 192.6 400 37.5
Psat4g155800 Pisum sativum HOM05D005648 ORTHO05D007357 5.5e-47 192.6 332 41.6
FAN03G1082 Fragaria x ananassa HOM05D005648 ORTHO05D007357 7.2e-47 192.2 220 54.5
Sp1g00620 Schrenkiella parvula HOM05D005648 ORTHO05D007357 9.4e-47 191.8 389 37.0
Aa31LG1G11030 Aethionema arabicum HOM05D005648 ORTHO05D007357 1.6e-46 191.0 400 35.0
Glyma.03G008900 Glycine max HOM05D005648 ORTHO05D007357 2.7e-46 190.3 359 38.4
MBI18_g44363_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 1.4e-45 188.0 254 48.4
ATR0680G381 Amborella trichopoda HOM05D005648 ORTHO05D007357 6.7e-45 185.7 380 37.6
A06p44840 Brassica napus HOM05D005648 ORTHO05D007357 5.7e-44 182.6 423 33.8
Lalb_Chr17g0339581 Lupinus albus HOM05D005648 ORTHO05D007357 5.7e-44 182.6 390 38.7
Actinidia33418 Actinidia chinensis HOM05D005648 ORTHO05D007357 9.7e-44 181.8 332 40.1
AUR62004360 Chenopodium quinoa HOM05D005648 ORTHO05D007357 4.8e-43 179.5 376 36.4
Peaxi162Scf00020g00041 Petunia axillaris HOM05D005648 ORTHO05D007357 8.2e-43 178.7 366 39.1
Nitab4.5_0000583g0110 Nicotiana tabacum HOM05D005648 ORTHO05D007357 1.1e-42 178.3 308 39.6
AT1G01690 Arabidopsis thaliana HOM05D005648 ORTHO05D007357 1.4e-42 177.9 433 34.2
BraA06t27356Z Brassica rapa HOM05D005648 ORTHO05D007357 1.4e-42 177.9 439 33.0
Medtr8g030730 Medicago truncatula HOM05D005648 ORTHO05D007357 1.4e-42 177.9 403 36.5
AL1G10680 Arabidopsis lyrata HOM05D005648 ORTHO05D007357 5.3e-42 176.0 433 34.2
TPR.G10304 Trifolium pratense HOM05D005648 ORTHO05D007357 1.2e-41 174.9 400 34.8
Duzib133G1405 Durio zibethinus HOM05D005648 ORTHO05D007357 3.5e-41 173.3 255 43.9
Carub.0001s0053 Capsella rubella HOM05D005648 ORTHO05D007357 4.5e-41 172.9 431 33.4
Rhsim01G0157000 Rhododendron simsii HOM05D005648 ORTHO05D007357 4.5e-41 172.9 350 37.7
A10p00320 Brassica napus HOM05D003351 ORTHO05D003806 3.8e-40 169.9 390 34.4
CARHR000670 Cardamine hirsuta HOM05D005648 ORTHO05D007357 3.8e-40 169.9 436 32.8
arahy.Tifrunner.gnm1.ann1.SJPY5G Arachis hypogaea HOM05D005648 ORTHO05D007357 5.0e-40 169.5 241 46.1
HPP92_008491 Vanilla planifolia HOM05D005648 ORTHO05D007357 6.5e-40 169.1 382 34.3
C07p31360 Brassica napus HOM05D005648 ORTHO05D008650 1.4e-39 167.9 435 31.3
unitig_26.g9738 Utricularia gibba HOM05D005648 ORTHO05D007357 2.5e-39 167.2 307 41.7
BraA10t42311Z Brassica rapa HOM05D005648 ORTHO05D007357 3.2e-39 166.8 401 34.4
arahy.Tifrunner.gnm1.ann1.79VNNQ Arachis hypogaea HOM05D005648 ORTHO05D007357 5.5e-39 166.0 268 42.5
Ca_23631_v3 Cicer arietinum L. HOM05D005648 ORTHO05D007357 5.5e-39 166.0 384 35.4
BolC7t43677H Brassica oleracea HOM05D005648 ORTHO05D007357 4.7e-38 162.9 431 31.6
PGSC0003DMG400000173 Solanum tuberosum HOM05D005648 ORTHO05D007357 8.0e-38 162.2 191 53.9
BcaC06g34230 Brassica carinata HOM05D005648 ORTHO05D007357 1.0e-37 161.8 428 31.1
MELO3C006108.2 Cucumis melo HOM05D005648 ORTHO05D007357 3.0e-37 160.2 264 38.6
BolC5t28826H Brassica oleracea HOM05D005648 ORTHO05D007357 1.7e-35 154.5 401 33.4
Sc23g0002870 Simmondsia chinensis HOM05D005648 ORTHO05D007357 1.7e-35 154.5 381 33.3
Lalb_Chr10g0096911 Lupinus albus HOM05D005648 ORTHO05D007357 4.8e-35 152.9 273 42.5
C05p00330 Brassica napus HOM05D003351 ORTHO05D003806 8.2e-35 152.1 399 33.1
EL10Ac7g16797 Beta vulgaris HOM05D005648 ORTHO05D007357 3.1e-34 150.2 377 34.0
CDE04G3514 Ceratophyllum demersum HOM05D005648 ORTHO05D007357 9.1e-34 148.7 409 33.7
PSO478G0111 Papaver somniferum HOM05D005648 ORTHO05D007357 5.0e-32 142.9 393 35.4
CsaV3_3G008890 Cucumis sativus L. HOM05D003539 ORTHO05D004111 1.5e-31 141.4 388 30.2
ClCG05G001510 Citrullus lanatus HOM05D005648 ORTHO05D007357 4.7e-30 136.3 408 30.1
Ah.05g180590 Amaranthus hybridus HOM05D005648 ORTHO05D007357 2.4e-26 124.0 397 30.0
BcaC06g31348 Brassica carinata HOM05D005648 ORTHO05D007357 2.0e-25 120.9 430 29.3
SHI13451 Sapria himalayana HOM05D005648 ORTHO05D007357 4.5e-25 119.8 234 36.8
SalBow3G1978 Salvia bowleyana HOM05D005648 ORTHO05D007357 1.7e-24 117.9 81 80.2
vmacro20940 Vaccinium macrocarpon HOM05D005648 ORTHO05D007357 5.5e-23 112.8 151 51.7
Zm00001eb404350 Zea mays HOM05D005648 ORTHO05D007357 4.7e-22 109.8 278 34.2
AUR62022570 Chenopodium quinoa HOM05D005648 ORTHO05D007357 3.0e-21 107.1 306 30.4
Zm00001eb000540 Zea mays HOM05D005648 ORTHO05D007357 1.7e-19 101.3 288 32.3
QL08p048682 Quercus lobata HOM05D005648 ORTHO05D007357 3.7e-19 100.1 136 44.1
CSS0007131 Camellia sinensis var. sinensis HOM05D005648 ORTHO05D007357 6.3e-19 99.4 316 31.6
MBI06_g29680_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 1.8e-18 97.8 124 50.8
arahy.Tifrunner.gnm1.ann1.QHU48Z Arachis hypogaea HOM05D005648 ORTHO05D007357 5.0e-16 89.7 109 45.9
CSS0016999 Camellia sinensis var. sinensis HOM05D005648 ORTHO05D007357 1.9e-15 87.8 86 64.0
Os03g0106300 Oryza sativa ssp. japonica HOM05D005648 ORTHO05D007357 1.2e-14 85.1 262 29.4
MBI01_g12685_MAGBIO Magnolia biondii HOM05D000532 ORTHO05D007357 8.9e-13 79.0 87 49.4
MBI18_g40590_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 2.2e-11 74.3 73 50.7
MBI18_g42710_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 3.7e-11 73.6 72 54.2
MBI17_g41096_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 5.4e-10 69.7 66 53.0
BcaB03g13607 Brassica carinata HOM05D003351 ORTHO05D003806 9.2e-10 68.9 382 27.5
MBI06_g27427_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 2.0e-09 67.8 70 52.9
FAN10G0802 Fragaria x ananassa HOM05D005648 ORTHO05D007357 5.9e-09 66.2 82 52.4
SHI13452 Sapria himalayana HOM05D005648 ORTHO05D007357 2.3e-08 64.3 112 42.0
MBI19_g11759_MAGBIO Magnolia biondii HOM05D000532 ORTHO05D002414 4.7e-06 56.6 70 45.7


User provided reference genes

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