Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4G02308 Striga asiatica HOM05D006920 ORTHO05D005895 0.0e+00 1600.5 883 100.0
MSTRG.19500 Avicennia marina HOM05D006920 ORTHO05D005895 4.5e-140 503.1 892 45.1
Migut.J00581 Erythranthe guttata HOM05D006920 ORTHO05D005895 3.1e-109 400.6 811 43.2
SalBow6G1737 Salvia bowleyana HOM05D006920 ORTHO05D005895 1.2e-108 398.7 954 39.2
Nitab4.5_0005104g0050 Nicotiana tabacum HOM05D006920 ORTHO05D005895 4.4e-63 247.3 873 33.4
Nitab4.5_0008077g0010 Nicotiana tabacum HOM05D006920 ORTHO05D005895 1.3e-62 245.7 866 33.5
Oeu064585.1 Olea europaea HOM05D006920 ORTHO05D005895 1.3e-59 235.7 982 31.2
Cc06_g11560 Coffea canephora HOM05D006920 ORTHO05D005895 1.3e-57 229.2 860 32.0
Dinv42334 Davidia involucrata HOM05D006920 ORTHO05D005895 4.5e-47 194.1 674 33.4
Hma1.2p1_0169F.1_g074930 Hydrangea macrophylla HOM05D006920 ORTHO05D005895 1.8e-43 182.2 798 32.1
Actinidia25244 Actinidia chinensis HOM05D006920 ORTHO05D005895 1.1e-40 172.9 806 30.3
Peaxi162Scf00028g00415 Petunia axillaris HOM05D006920 ORTHO05D005895 9.0e-40 169.9 880 29.5
Oeu000320.3 Olea europaea HOM05D006920 ORTHO05D005895 1.2e-39 169.5 638 32.3
Prupe.7G207100 Prunus persica HOM05D006920 ORTHO05D005895 2.6e-39 168.3 940 29.1
Rhsim05G0018400 Rhododendron simsii HOM05D006920 ORTHO05D005895 8.4e-38 163.3 605 33.9
PGSC0003DMG400014565 Solanum tuberosum HOM05D006920 ORTHO05D005895 1.1e-37 162.9 839 29.3
RcHm_v2.0_Chr2g0093651 Rosa chinensis HOM05D006920 ORTHO05D005895 7.1e-37 160.2 768 30.2
RcHm_v2.0_Chr3g0459471 Rosa chinensis HOM05D006920 ORTHO05D005895 2.1e-36 158.7 907 29.7
DCAR_031337 Daucus carota HOM05D006920 ORTHO05D005895 4.6e-36 157.5 913 28.5
TWI63G0676 Tripterygium wilfordii HOM05D006920 ORTHO05D005895 7.9e-36 156.8 679 31.5
Dinv36779 Davidia involucrata HOM05D006920 ORTHO05D005895 1.8e-35 155.6 559 36.3
Sopen05g005130 Solanum pennellii HOM05D006920 ORTHO05D005895 2.3e-35 155.2 872 29.1
DCAR_015050 Daucus carota HOM05D006920 ORTHO05D005895 1.3e-33 149.4 812 27.7
TPR.G14423 Trifolium pratense HOM05D006920 ORTHO05D005895 1.4e-32 146.0 318 40.3
vmacro17256 Vaccinium macrocarpon HOM05D006920 ORTHO05D005895 1.8e-32 145.6 517 31.9
Nn6g35509 Nelumbo nucifera HOM05D006920 ORTHO05D005895 1.2e-31 142.9 605 33.6
ECA233G4205 Erigeron canadensis HOM05D006920 ORTHO05D005895 3.4e-31 141.4 385 40.5
CAN.G610.81 Capsicum annuum HOM05D006920 ORTHO05D005895 5.9e-31 140.6 852 27.8
unitig_699.g19418 Utricularia gibba HOM05D006920 ORTHO05D005895 1.0e-30 139.8 676 31.1
MD15G1209300 Malus domestica HOM05D006920 ORTHO05D005895 8.5e-30 136.7 770 27.0
TAR383G0297 Trochodendron aralioides HOM05D006920 ORTHO05D005895 1.1e-29 136.3 820 29.3
Hma1.2p1_0476F.1_g160830 Hydrangea macrophylla HOM05D006920 ORTHO05D005895 3.2e-29 134.8 481 36.4
Lj4A292T33 Lonicera japonica HOM05D006920 ORTHO05D005895 4.2e-29 134.4 571 33.1
Sc08g0008560 Simmondsia chinensis HOM05D006920 ORTHO05D005895 4.2e-29 134.4 332 32.8
Glyma.14G213000 Glycine max HOM05D006920 ORTHO05D005895 1.6e-28 132.5 563 34.3
Atru.chr7.1617 Acer truncatum HOM05D006920 ORTHO05D005895 4.6e-28 131.0 834 29.7
Sed0019505 Sechium edule HOM05D006920 ORTHO05D005895 6.1e-28 130.6 877 27.6
arahy.Tifrunner.gnm1.ann1.50MPSE Arachis hypogaea HOM05D006920 ORTHO05D005895 5.1e-27 127.5 823 27.3
Hund06669 Selenicereus undatus HOM05D006920 ORTHO05D005895 5.1e-27 127.5 211 53.1
AT5G56930 Arabidopsis thaliana HOM05D010535 ORTHO05D005895 3.3e-26 124.8 398 32.4
PGR142G4106 Punica granatum HOM05D006920 ORTHO05D005895 4.3e-26 124.4 776 28.5
Solyc05g009350.4 Solanum lycopersicum HOM05D006920 ORTHO05D005895 4.3e-26 124.4 410 37.6
Ciclev10007413m.g Citrus clementina HOM05D006920 ORTHO05D005895 5.7e-26 124.0 801 30.3
Gorai.009G032200 Gossypium raimondii HOM05D006920 ORTHO05D005895 7.4e-26 123.6 647 32.0
FAN26G1238 Fragaria x ananassa HOM05D006920 ORTHO05D005895 1.6e-25 122.5 895 27.6
FvH4_1g07770 Fragaria vesca HOM05D006920 ORTHO05D005895 2.8e-25 121.7 764 26.6
Duzib150G1610 Durio zibethinus HOM05D006920 ORTHO05D005895 3.7e-25 121.3 317 38.8
Eucgr.C01704 Eucalyptus grandis HOM05D006920 ORTHO05D005895 1.8e-24 119.0 427 36.5
Lj3g0019860 Lotus japonicus HOM05D006920 ORTHO05D005895 1.8e-24 119.0 242 45.5
Manes.01G178200 Manihot esculenta HOM05D006920 ORTHO05D005895 2.4e-24 118.6 776 29.8
Psat5g132560 Pisum sativum HOM05D006920 ORTHO05D005895 3.1e-24 118.2 442 36.2
Phvul.010G094400 Phaseolus vulgaris HOM05D006920 ORTHO05D005895 4.1e-24 117.9 422 33.9
FAN26G3372 Fragaria x ananassa HOM05D006920 ORTHO05D005895 5.3e-24 117.5 894 27.5
arahy.Tifrunner.gnm1.ann1.IGMF9F Arachis hypogaea HOM05D006920 ORTHO05D005895 9.1e-24 116.7 659 29.6
ClCG11G016050 Citrullus lanatus HOM05D006920 ORTHO05D005895 1.5e-23 115.9 723 28.4
Sabra06G0117400 Salix brachista HOM05D006920 ORTHO05D005895 1.0e-22 113.2 791 28.6
HPP92_005499 Vanilla planifolia HOM05D006920 ORTHO05D005895 1.0e-22 113.2 480 30.0
Aa31LG11G5930 Aethionema arabicum HOM05D010535 ORTHO05D005895 1.3e-22 112.8 257 37.0
FAN28G2753 Fragaria x ananassa HOM05D006920 ORTHO05D005895 1.7e-22 112.5 895 27.4
Thecc.09G086800 Theobroma cacao HOM05D006920 ORTHO05D005895 2.2e-22 112.1 420 33.6
CiPaw.03G213600 Carya illinoinensis HOM05D006920 ORTHO05D005895 2.9e-22 111.7 760 28.8
CANSAT56G3092 Cannabis sativa HOM05D006920 ORTHO05D005895 6.5e-22 110.5 785 28.8
Potri.006G148400 Populus trichocarpa HOM05D006920 ORTHO05D005895 6.5e-22 110.5 892 28.3
CsaV3_4G027920 Cucumis sativus L. HOM05D006920 ORTHO05D005895 1.4e-21 109.4 792 27.4
AL8G32790 Arabidopsis lyrata HOM05D010535 ORTHO05D005895 1.9e-21 109.0 390 32.1
MBI04_g34755_MAGBIO Magnolia biondii HOM05D006920 ORTHO05D005895 1.9e-21 109.0 522 31.2
Sp6g18630 Schrenkiella parvula HOM05D010535 ORTHO05D005895 2.5e-21 108.6 331 36.0
VMungo0331G1985 Vigna mungo HOM05D006920 ORTHO05D005895 3.2e-21 108.2 395 36.7
Carub.0008s1741 Capsella rubella HOM05D010535 ORTHO05D005895 4.2e-21 107.8 253 39.5
Lalb_Chr25g0278561 Lupinus albus HOM05D006920 ORTHO05D005895 4.2e-21 107.8 399 37.3
FAN23G0431 Fragaria x ananassa HOM05D006920 ORTHO05D005895 9.4e-21 106.7 892 26.9
Gohir.D05G032000 Gossypium hirsutum HOM05D006920 ORTHO05D005895 9.4e-21 106.7 646 30.3
BcaC03g14196 Brassica carinata HOM05D010535 ORTHO05D005895 2.1e-20 105.5 313 34.2
C02p14780 Brassica napus HOM05D010535 ORTHO05D005895 2.1e-20 105.5 313 34.2
BolC2t07607H Brassica oleracea HOM05D010535 ORTHO05D005895 2.1e-20 105.5 313 34.2
Gohir.A05G030600 Gossypium hirsutum HOM05D006920 ORTHO05D005895 3.6e-20 104.8 616 30.4
Lj6g0023447 Lotus japonicus HOM05D006920 ORTHO05D005895 3.6e-20 104.8 392 34.7
ATR0178G033 Amborella trichopoda HOM05D006920 ORTHO05D005895 1.8e-19 102.4 161 44.1
CDE04G1224 Ceratophyllum demersum HOM05D006920 ORTHO05D005895 2.3e-19 102.1 372 35.5
Medtr5g096500 Medicago truncatula HOM05D006920 ORTHO05D005895 3.0e-19 101.7 755 26.6
Haze_25928 Corylus avellana HOM05D006920 ORTHO05D005895 6.7e-19 100.5 698 28.8
HanXRQChr05g0128971 Helianthus annuus HOM05D006920 ORTHO05D005895 8.8e-19 100.1 426 31.9
FAN19G0513 Fragaria x ananassa HOM05D006920 ORTHO05D005895 1.1e-18 99.8 826 27.0
A02p08870 Brassica napus HOM05D010535 ORTHO05D005895 1.5e-18 99.4 290 35.5
BraA02t05956Z Brassica rapa HOM05D010535 ORTHO05D005895 1.5e-18 99.4 290 35.5
Cfa003067 Carpinus fangiana HOM05D006920 ORTHO05D005895 1.5e-18 99.4 760 27.2
ECA240G4801 Erigeron canadensis HOM05D006920 ORTHO05D005895 1.5e-18 99.4 62 77.4
PSO063G3291 Papaver somniferum HOM05D006920 ORTHO05D005895 3.3e-18 98.2 219 44.7
GSVIVG01015184001 Vitis vinifera HOM05D006920 ORTHO05D005895 7.4e-18 97.1 524 31.1
EL10Ac8g19187 Beta vulgaris HOM05D036879 ORTHO05D005895 9.7e-18 96.7 119 61.3
BcaB05g22299 Brassica carinata HOM05D010535 ORTHO05D005895 9.7e-18 96.7 412 28.2
Thhalv10012834m.g Eutrema salsugineum HOM05D010535 ORTHO05D005895 1.7e-17 95.9 441 32.7
Gohir.A10G064850 Gossypium hirsutum HOM05D006920 ORTHO05D005895 2.8e-17 95.1 207 42.0
HanXRQChr03g0060321 Helianthus annuus HOM05D006920 ORTHO05D005895 3.7e-17 94.7 426 32.2
Lsat_1_v5_gn_7_36681 Lactuca sativa HOM05D006920 ORTHO05D005895 1.4e-16 92.8 183 40.4
Migut.J00579 Erythranthe guttata HOM05D006920 ORTHO05D005895 1.8e-16 92.4 123 56.1
MELO3C010521.2 Cucumis melo HOM05D006920 ORTHO05D005895 3.1e-16 91.7 609 28.1
Sed0003269 Sechium edule HOM05D006920 ORTHO05D005895 4.1e-16 91.3 723 27.7
PSO832G2112 Papaver somniferum HOM05D006920 ORTHO05D005895 6.9e-16 90.5 203 45.8
HanXRQChr10g0310341 Helianthus annuus HOM05D001214 ORTHO05D001029 9.1e-16 90.1 255 34.9
CARHR270670 Cardamine hirsuta HOM05D010535 ORTHO05D005895 1.2e-15 89.7 358 32.1
PSO384G1468 Papaver somniferum HOM05D006920 ORTHO05D005895 4.5e-15 87.8 283 35.0
HanXRQChr14g0436791 Helianthus annuus HOM05D006920 ORTHO05D005895 5.0e-14 84.3 72 52.8
SEGI_28908 Sequoiadendron giganteum HOM05D006920 ORTHO05D005895 8.5e-14 83.6 116 56.0
COL.COLO4_18185 Corchorus olitorius HOM05D006920 ORTHO05D005895 9.4e-13 80.1 540 25.9
Mapoly0131s0021 Marchantia polymorpha HOM05D006920 ORTHO05D005895 1.6e-12 79.3 138 48.6
Ah.12g064230 Amaranthus hybridus HOM05D006920 ORTHO05D005895 2.7e-12 78.6 60 65.0
Aa31LG11G5970 Aethionema arabicum HOM05D010535 ORTHO05D005895 6.1e-12 77.4 114 44.7
CDE06G2477 Ceratophyllum demersum HOM05D002968 ORTHO05D005895 1.4e-11 76.3 210 43.8
QL02p062309 Quercus lobata HOM05D006920 ORTHO05D005895 5.2e-11 74.3 773 26.1
AUR62033943 Chenopodium quinoa HOM05D036879 ORTHO05D005895 2.6e-10 72.0 389 27.2
Pp3c19_22680 Physcomitrium patens HOM05D006920 ORTHO05D005895 9.7e-10 70.1 119 52.1
Aqoxy7G02156 Aquilegia oxysepala HOM05D006920 ORTHO05D005895 8.2e-09 67.0 363 30.9
Zm00001eb160100 Zea mays HOM05D006920 ORTHO05D005895 5.3e-08 64.3 200 42.0
AagrBONN_evm.TU.Sc2ySwM_228.2245 Anthoceros agrestis HOM05D006920 ORTHO05D005895 9.1e-08 63.5 135 48.9
Ca_12179_v3 Cicer arietinum L. HOM05D006920 ORTHO05D005895 1.6e-07 62.8 858 25.2
Aa31LG11G5940 Aethionema arabicum HOM05D010535 ORTHO05D005895 2.0e-07 62.4 208 30.3
CSS0039023 Camellia sinensis var. sinensis HOM05D041308 ORTHO05D005895 4.5e-07 61.2 360 25.0
CSS0019085 Camellia sinensis var. sinensis HOM05D041308 ORTHO05D005895 5.9e-07 60.8 322 27.6
CSS0014816 Camellia sinensis var. sinensis HOM05D041308 ORTHO05D005895 1.0e-06 60.1 363 24.8
A10p14250 Brassica napus HOM05D010535 ORTHO05D005895 6.5e-06 57.4 50 58.0
BraA10t43516Z Brassica rapa HOM05D010535 ORTHO05D005895 6.5e-06 57.4 50 58.0
Glyma.18G092000 Glycine max HOM05D006920 ORTHO05D005895 6.5e-06 57.4 297 29.0


User provided reference genes

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