Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4G02279 Striga asiatica HOM05D004048 ORTHO05D004859 4.4e-203 711.1 360 100.0
Migut.B01799 Erythranthe guttata HOM05D004048 ORTHO05D004859 6.7e-175 617.5 358 86.6
Dinv32522 Davidia involucrata HOM05D004048 ORTHO05D004859 3.1e-164 582.0 358 83.2
CSS0027402 Camellia sinensis var. sinensis HOM05D004048 ORTHO05D004859 1.9e-161 572.8 332 85.8
CSS0029554 Camellia sinensis var. sinensis HOM05D004048 ORTHO05D004859 2.5e-161 572.4 332 85.8
Manes.05G029300 Manihot esculenta HOM05D004048 ORTHO05D004859 2.5e-161 572.4 330 85.8
Sp5g01880 Schrenkiella parvula HOM05D004048 ORTHO05D004859 3.2e-161 572.0 354 81.9
Ciclev10020577m.g Citrus clementina HOM05D004048 ORTHO05D004859 5.5e-161 571.2 350 80.0
QL04p055532 Quercus lobata HOM05D004048 ORTHO05D004859 2.1e-160 569.3 332 85.5
THA.LOC104817317 Tarenaya hassleriana HOM05D004048 ORTHO05D004859 3.5e-160 568.5 331 84.6
Hund27241 Selenicereus undatus HOM05D004048 ORTHO05D004859 4.6e-160 568.2 343 82.8
C06p27540 Brassica napus HOM05D004048 ORTHO05D004859 6.1e-160 567.8 327 85.9
A07p25550 Brassica napus HOM05D004048 ORTHO05D004859 1.0e-159 567.0 327 85.9
BolC6t37921H Brassica oleracea HOM05D004048 ORTHO05D004859 1.0e-159 567.0 327 85.9
BraA07t30196Z Brassica rapa HOM05D004048 ORTHO05D004859 1.0e-159 567.0 327 85.9
COL.COLO4_12778 Corchorus olitorius HOM05D004048 ORTHO05D004859 1.8e-159 566.2 331 84.9
Potri.014G090500 Populus trichocarpa HOM05D004048 ORTHO05D004859 1.8e-159 566.2 345 81.7
BcaC08g45130 Brassica carinata HOM05D004048 ORTHO05D004859 2.3e-159 565.8 327 85.6
BcaB02g07374 Brassica carinata HOM05D004048 ORTHO05D004859 3.0e-159 565.5 329 84.8
CAN.G439.29 Capsicum annuum HOM05D004048 ORTHO05D004859 3.9e-159 565.1 357 80.7
MD07G1131200 Malus domestica HOM05D004048 ORTHO05D004859 6.7e-159 564.3 331 85.2
Actinidia10075 Actinidia chinensis HOM05D004048 ORTHO05D004859 1.1e-158 563.5 329 84.5
Gohir.D08G043100 Gossypium hirsutum HOM05D004048 ORTHO05D004859 1.1e-158 563.5 325 85.2
vmacro13227 Vaccinium macrocarpon HOM05D004048 ORTHO05D004859 1.1e-158 563.5 333 84.4
EL10Ac1g00354 Beta vulgaris HOM05D004048 ORTHO05D004859 1.9e-158 562.8 327 84.1
A09p53600 Brassica napus HOM05D004048 ORTHO05D004859 2.5e-158 562.4 328 84.8
Cc02_g21240 Coffea canephora HOM05D004048 ORTHO05D004859 2.5e-158 562.4 324 86.7
Thhalv10001521m.g Eutrema salsugineum HOM05D004048 ORTHO05D004859 2.5e-158 562.4 330 84.2
Gorai.004G041700 Gossypium raimondii HOM05D004048 ORTHO05D004859 2.5e-158 562.4 325 85.2
Nitab4.5_0000615g0020 Nicotiana tabacum HOM05D004048 ORTHO05D004859 2.5e-158 562.4 355 80.6
PSO170G0644 Papaver somniferum HOM05D004048 ORTHO05D004859 2.5e-158 562.4 327 85.0
Sabra14G0065600 Salix brachista HOM05D004048 ORTHO05D004859 2.5e-158 562.4 327 84.1
TAR375G1056 Trochodendron aralioides HOM05D004048 ORTHO05D004859 2.5e-158 562.4 356 81.2
Lj9C589T5 Lonicera japonica HOM05D004048 ORTHO05D004859 3.3e-158 562.0 337 83.4
AT3G61530 Arabidopsis thaliana HOM05D004048 ORTHO05D004859 4.3e-158 561.6 330 83.9
Peaxi162Scf00217g00711 Petunia axillaris HOM05D004048 ORTHO05D004859 4.3e-158 561.6 355 80.0
Thecc.01G352400 Theobroma cacao HOM05D004048 ORTHO05D004859 5.7e-158 561.2 328 84.5
Aqoxy5G04084 Aquilegia oxysepala HOM05D004048 ORTHO05D004859 9.7e-158 560.5 327 85.9
Solyc09g007130.3 Solanum lycopersicum HOM05D004048 ORTHO05D004859 9.7e-158 560.5 353 80.5
Aa31LG10G15450 Aethionema arabicum HOM05D004048 ORTHO05D004859 1.3e-157 560.1 327 85.0
PSO063G1481 Papaver somniferum HOM05D004048 ORTHO05D004859 1.3e-157 560.1 328 84.5
Sp4g28180 Schrenkiella parvula HOM05D004048 ORTHO05D004859 1.3e-157 560.1 330 83.9
AL5G43890 Arabidopsis lyrata HOM05D004048 ORTHO05D004859 1.6e-157 559.7 330 83.6
CiPaw.02G034800 Carya illinoinensis HOM05D004048 ORTHO05D004859 1.6e-157 559.7 330 84.5
Gohir.A08G032200 Gossypium hirsutum HOM05D004048 ORTHO05D004859 2.8e-157 558.9 325 84.0
TWI23G0617 Tripterygium wilfordii HOM05D004048 ORTHO05D004859 4.8e-157 558.1 324 85.5
AUR62004413 Chenopodium quinoa HOM05D004048 ORTHO05D004859 6.3e-157 557.8 327 84.7
BraA09t40782Z Brassica rapa HOM05D004048 ORTHO05D004859 8.2e-157 557.4 328 84.5
Duzib268G0835 Durio zibethinus HOM05D004048 ORTHO05D004859 8.2e-157 557.4 330 83.6
AT2G46110 Arabidopsis thaliana HOM05D004048 ORTHO05D004859 1.1e-156 557.0 330 83.6
Prupe.2G177600 Prunus persica HOM05D004048 ORTHO05D004859 1.1e-156 557.0 331 83.4
PGSC0003DMG400002011 Solanum tuberosum HOM05D004048 ORTHO05D004859 1.8e-156 556.2 357 79.0
DCAR_025214 Daucus carota HOM05D004048 ORTHO05D004859 2.4e-156 555.8 343 80.8
Haze_15565 Corylus avellana HOM05D004048 ORTHO05D004859 4.1e-156 555.1 339 81.1
PGR004G0897 Punica granatum HOM05D004048 ORTHO05D004859 5.3e-156 554.7 332 82.5
BcaC07g40651 Brassica carinata HOM05D004048 ORTHO05D004859 6.9e-156 554.3 328 83.2
BolC8t51222H Brassica oleracea HOM05D004048 ORTHO05D004859 6.9e-156 554.3 328 83.2
Sc01g0003210 Simmondsia chinensis HOM05D004048 ORTHO05D004859 6.9e-156 554.3 337 81.0
Carub.0004s2881 Capsella rubella HOM05D004048 ORTHO05D004859 9.0e-156 553.9 330 82.7
C08p36390 Brassica napus HOM05D004048 ORTHO05D004859 1.5e-155 553.1 328 83.2
MBI03_g34597_MAGBIO Magnolia biondii HOM05D004048 ORTHO05D004859 3.4e-155 552.0 328 83.2
Hma1.2p1_0335F.1_g128890 Hydrangea macrophylla HOM05D004048 ORTHO05D004859 1.0e-154 550.4 344 79.1
Eucgr.B01988 Eucalyptus grandis HOM05D004048 ORTHO05D004859 5.0e-154 548.1 322 84.2
Nn1g01686 Nelumbo nucifera HOM05D004048 ORTHO05D004859 6.5e-154 547.7 327 83.2
Rhsim07G0205800 Rhododendron simsii HOM05D004048 ORTHO05D004859 6.5e-154 547.7 383 74.2
Atru.chr7.1494 Acer truncatum HOM05D004048 ORTHO05D004859 8.5e-154 547.4 333 80.2
FvH4_7g15370 Fragaria vesca HOM05D004048 ORTHO05D004859 8.5e-154 547.4 327 83.2
FAN06G1753 Fragaria x ananassa HOM05D004048 ORTHO05D004859 1.1e-153 547.0 327 83.2
RcHm_v2.0_Chr1g0357691 Rosa chinensis HOM05D004048 ORTHO05D004859 1.4e-153 546.6 331 82.2
arahy.Tifrunner.gnm1.ann1.9CR96V Arachis hypogaea HOM05D004048 ORTHO05D004859 7.2e-153 544.3 346 79.2
FAN10G1698 Fragaria x ananassa HOM05D004048 ORTHO05D004859 7.2e-153 544.3 327 82.9
FAN10G3606 Fragaria x ananassa HOM05D004048 ORTHO05D004859 7.2e-153 544.3 327 82.9
Carub.0005s2822 Capsella rubella HOM05D004048 ORTHO05D004859 2.1e-152 542.7 327 81.3
Gohir.D08G154300 Gossypium hirsutum HOM05D004048 ORTHO05D004859 2.7e-152 542.3 345 79.1
Gorai.004G160400 Gossypium raimondii HOM05D004048 ORTHO05D004859 2.7e-152 542.3 330 81.5
arahy.Tifrunner.gnm1.ann1.8BBS1S Arachis hypogaea HOM05D004048 ORTHO05D004859 3.6e-152 542.0 346 78.9
FAN03G0096 Fragaria x ananassa HOM05D004048 ORTHO05D004859 4.6e-152 541.6 327 82.3
VMungo0331G0386 Vigna mungo HOM05D004048 ORTHO05D004859 4.6e-152 541.6 329 81.5
CsaV3_7G025860 Cucumis sativus L. HOM05D004048 ORTHO05D004859 1.8e-151 539.7 325 81.8
HanXRQChr17g0562171 Helianthus annuus HOM05D004048 ORTHO05D004859 1.8e-151 539.7 331 82.5
Oeu054354.2 Olea europaea HOM05D004048 ORTHO05D004859 1.8e-151 539.7 369 75.9
FAN06G0189 Fragaria x ananassa HOM05D004048 ORTHO05D004859 3.3e-150 535.4 344 78.8
Psat4g156920 Pisum sativum HOM05D004048 ORTHO05D004859 5.7e-150 534.6 325 82.2
CANSAT56G4107 Cannabis sativa HOM05D004048 ORTHO05D004859 9.7e-150 533.9 327 81.3
Glyma.07G064600 Glycine max HOM05D004048 ORTHO05D004859 9.7e-150 533.9 330 80.9
Duzib138G1147 Durio zibethinus HOM05D004048 ORTHO05D004859 2.2e-149 532.7 358 75.1
Lj1g0027864 Lotus japonicus HOM05D004048 ORTHO05D004859 4.8e-149 531.6 330 80.3
Lalb_Chr17g0338041 Lupinus albus HOM05D004048 ORTHO05D004859 1.1e-148 530.4 328 80.2
TPR.G28287 Trifolium pratense HOM05D004048 ORTHO05D004859 1.4e-148 530.0 325 81.2
Nitab4.5_0005222g0030 Nicotiana tabacum HOM05D004048 ORTHO05D004859 2.4e-148 529.3 353 77.9
BcaC07g40671 Brassica carinata HOM05D004048 ORTHO05D004859 1.5e-147 526.6 335 79.4
Medtr8g028555 Medicago truncatula HOM05D004048 ORTHO05D004859 1.5e-147 526.6 344 77.6
Lj5g0009706 Lotus japonicus HOM05D004048 ORTHO05D004859 2.0e-147 526.2 325 80.6
Lsat_1_v5_gn_4_35260 Lactuca sativa HOM05D004048 ORTHO05D004859 2.6e-147 525.8 325 81.2
AUR62022619 Chenopodium quinoa HOM05D004048 ORTHO05D004859 4.5e-147 525.0 301 85.7
HPP92_005267 Vanilla planifolia HOM05D004048 ORTHO05D004859 3.8e-146 521.9 330 77.9
RcHm_v2.0_Chr1g0357711 Rosa chinensis HOM05D004048 ORTHO05D004859 1.1e-145 520.4 329 78.1
arahy.Tifrunner.gnm1.ann1.8G3C0P Arachis hypogaea HOM05D004048 ORTHO05D004859 1.4e-145 520.0 330 77.6
TPR.G37181 Trifolium pratense HOM05D004048 ORTHO05D004859 1.9e-145 519.6 325 79.4
Rhsim07G0010400 Rhododendron simsii HOM05D004048 ORTHO05D004859 9.4e-145 517.3 347 76.7
unitig_60.g25627 Utricularia gibba HOM05D004048 ORTHO05D004859 4.7e-144 515.0 340 77.9
MELO3C014805.2 Cucumis melo HOM05D004048 ORTHO05D004859 6.1e-144 514.6 323 79.3
Sopen09g002000 Solanum pennellii HOM05D004048 ORTHO05D004859 1.8e-143 513.1 296 85.8
Ca_03490_v3 Cicer arietinum L. HOM05D004048 ORTHO05D004859 2.3e-143 512.7 351 74.9
MELO3C012767.2 Cucumis melo HOM05D004048 ORTHO05D004859 4.5e-139 498.4 389 67.9
Rhsim07G0206900 Rhododendron simsii HOM05D004048 ORTHO05D004859 1.5e-137 493.4 400 66.2
CARHR107270 Cardamine hirsuta HOM05D004048 ORTHO05D004859 1.9e-137 493.0 330 76.7
SEGI_12250 Sequoiadendron giganteum HOM05D004048 ORTHO05D004859 8.0e-136 487.6 325 72.0
Ah.05g180160 Amaranthus hybridus HOM05D004048 ORTHO05D004859 3.0e-135 485.7 347 72.3
ClCG09G009090 Citrullus lanatus HOM05D004048 ORTHO05D004859 1.1e-134 483.8 326 74.5
Phvul.010G104900 Phaseolus vulgaris HOM05D004048 ORTHO05D004859 1.1e-134 483.8 286 84.3
FvH4_7g15371 Fragaria vesca HOM05D004048 ORTHO05D004859 6.3e-133 478.0 353 69.4
Pp3c7_220 Physcomitrium patens HOM05D004048 ORTHO05D004859 1.1e-129 467.2 324 70.1
SMO144G0210 Selaginella moellendorffii HOM05D004048 ORTHO05D004859 1.4e-127 460.3 342 67.0
Mapoly0035s0043 Marchantia polymorpha HOM05D004048 ORTHO05D004859 7.5e-126 454.5 351 65.0
Cpa.g.sc11.73 Carica papaya HOM05D004048 ORTHO05D004859 2.4e-124 449.5 331 71.3
AagrBONN_evm.TU.Sc2ySwM_117.1042 Anthoceros agrestis HOM05D004048 ORTHO05D004859 7.0e-124 448.0 330 67.6
AagrBONN_evm.TU.Sc2ySwM_117.2358 Anthoceros agrestis HOM05D004048 ORTHO05D004859 2.0e-123 446.4 330 67.3
GSVIVG01026967001 Vitis vinifera HOM05D004048 ORTHO05D004859 3.8e-122 442.2 261 83.9
Os01g0225500 Oryza sativa ssp. japonica HOM05D004048 ORTHO05D004859 1.9e-121 439.9 308 71.4
Glyma.09G254700 Glycine max HOM05D004048 ORTHO05D004859 4.2e-121 438.7 308 70.8
Cre12.g508550 Chlamydomonas reinhardtii HOM05D004048 ORTHO05D004859 2.3e-119 433.0 331 63.7
MCO13G154 Micromonas commoda HOM05D004048 ORTHO05D004859 3.0e-119 432.6 320 66.2
ECA234G0147 Erigeron canadensis HOM05D004048 ORTHO05D004859 1.2e-118 430.6 287 77.4
FAN10G3616 Fragaria x ananassa HOM05D004048 ORTHO05D004859 4.4e-118 428.7 361 63.4
Gohir.A08G133000 Gossypium hirsutum HOM05D004048 ORTHO05D004859 1.1e-116 424.1 262 80.9
CBR_g45417 Chara braunii HOM05D004048 ORTHO05D004859 2.1e-112 409.8 295 66.1
BcaC07g42671 Brassica carinata HOM05D004048 ORTHO05D004859 2.8e-112 409.5 340 65.3
Nn6g32447 Nelumbo nucifera HOM05D004048 ORTHO05D004859 4.4e-110 402.1 327 66.1
CDE11G0110 Ceratophyllum demersum HOM05D004048 ORTHO05D004859 7.5e-110 401.4 248 81.9
Zm00001eb339000 Zea mays HOM05D004048 ORTHO05D004859 6.3e-109 398.3 240 83.3
SMO356G0035 Selaginella moellendorffii HOM05D004048 ORTHO05D004859 8.3e-109 397.9 310 64.2
ATR0751G082 Amborella trichopoda HOM05D004048 ORTHO05D004859 4.1e-108 395.6 238 82.4
Medtr4g037305 Medicago truncatula HOM05D004048 ORTHO05D004859 2.9e-106 389.4 240 81.2
SMO119G0299 Selaginella moellendorffii HOM05D004048 ORTHO05D004859 1.6e-104 383.6 274 67.5
FAN06G4041 Fragaria x ananassa HOM05D004048 ORTHO05D004859 1.8e-103 380.2 273 72.2
FAN06G1997 Fragaria x ananassa HOM05D004048 ORTHO05D004859 8.9e-103 377.9 364 56.6
SEGI_21771 Sequoiadendron giganteum HOM05D004048 ORTHO05D004859 1.9e-100 370.2 238 76.1
PRCOL_00005166 Prasinoderma coloniale HOM05D004048 ORTHO05D004859 3.5e-99 365.9 335 56.7
Eucgr.B01984 Eucalyptus grandis HOM05D004048 ORTHO05D004859 1.0e-98 364.4 350 59.4
ATR0751G137 Amborella trichopoda HOM05D004048 ORTHO05D004859 3.9e-98 362.5 233 76.0
FAN10G1509 Fragaria x ananassa HOM05D004048 ORTHO05D004859 3.6e-96 355.9 240 75.8
AL4G45340 Arabidopsis lyrata HOM05D004048 ORTHO05D004859 1.2e-83 314.3 200 78.5
Medtr4g037245 Medicago truncatula HOM05D004048 ORTHO05D004859 6.6e-74 282.0 203 73.4
Eucgr.B01986 Eucalyptus grandis HOM05D004048 ORTHO05D004859 8.7e-74 281.6 288 57.3
Cfa001640 Carpinus fangiana HOM05D004048 ORTHO05D004859 7.6e-62 241.9 281 48.8
arahy.Tifrunner.gnm1.ann1.CIF5FW Arachis hypogaea HOM05D004048 ORTHO05D004859 3.5e-59 233.0 157 73.2
SEGI_25526 Sequoiadendron giganteum HOM05D004048 ORTHO05D004859 8.1e-56 221.9 161 67.1
PGSC0003DMG400018716 Solanum tuberosum HOM05D004048 ORTHO05D004859 5.8e-54 215.7 130 80.0
Cfa003872 Carpinus fangiana HOM05D004048 ORTHO05D004859 1.0e-50 204.9 327 43.7
TPR.G28294 Trifolium pratense HOM05D004048 ORTHO05D004859 6.7e-50 202.2 253 49.8
SHI16536 Sapria himalayana HOM05D004048 ORTHO05D004859 1.9e-49 200.7 113 85.0
Os01g0225400 Oryza sativa ssp. japonica HOM05D004048 ORTHO05D004859 2.5e-49 200.3 129 76.0
Haze_27487 Corylus avellana HOM05D004048 ORTHO05D004859 1.9e-44 184.1 236 40.3
Haze_26957 Corylus avellana HOM05D005470 ORTHO05D006855 6.1e-43 179.1 210 48.1
MBI17_g16531_MAGBIO Magnolia biondii HOM05D004048 ORTHO05D004859 6.3e-40 169.1 104 77.9
CAN.G439.28 Capsicum annuum HOM05D004048 ORTHO05D004859 3.6e-35 153.3 88 79.5
Lj6g0001313 Lotus japonicus HOM05D004048 ORTHO05D004859 4.6e-35 152.9 96 72.9
MBI12_g43904_MAGBIO Magnolia biondii HOM05D004048 ORTHO05D004859 1.8e-34 151.0 96 81.2
FAN01G2460 Fragaria x ananassa HOM05D004048 ORTHO05D004859 7.4e-33 145.6 91 75.8
Ca_03489_v3 Cicer arietinum L. HOM05D004048 ORTHO05D004859 9.7e-33 145.2 110 71.8
Medtr4g037315 Medicago truncatula HOM05D004048 ORTHO05D004859 1.4e-31 141.4 95 69.5
Medtr4g037275 Medicago truncatula HOM05D004048 ORTHO05D004859 1.7e-29 134.4 76 82.9
Actinidia20163 Actinidia chinensis HOM05D004048 ORTHO05D004859 2.1e-27 127.5 152 56.6
arahy.Tifrunner.gnm1.ann1.63JPLQ Arachis hypogaea HOM05D004048 ORTHO05D004859 1.5e-25 121.3 86 65.1
AL4G45350 Arabidopsis lyrata HOM05D004048 ORTHO05D038698 3.5e-22 110.2 58 87.9
SGA_v2.0_scaffold4G02383 Striga asiatica HOM05D004048 ORTHO05D051375 2.9e-21 107.1 71 83.1
FAN10G2371 Fragaria x ananassa HOM05D004048 ORTHO05D038698 3.6e-19 100.1 74 66.2
HanXRQChr15g0474641 Helianthus annuus HOM05D004048 ORTHO05D004859 1.4e-18 98.2 62 82.3
arahy.Tifrunner.gnm1.ann1.DMYH1R Arachis hypogaea HOM05D004048 ORTHO05D004859 2.0e-17 94.4 77 57.1
ATR0751G274 Amborella trichopoda HOM05D004048 ORTHO05D004859 3.3e-17 93.6 73 58.9
Potri.002G164601 Populus trichocarpa HOM05D004048 ORTHO05D004859 1.3e-16 91.7 72 59.7
DCAR_025216 Daucus carota HOM05D003118 ORTHO05D003618 8.2e-16 89.0 78 66.7
arahy.Tifrunner.gnm1.ann1.GKUV9U Arachis hypogaea HOM05D004048 ORTHO05D004859 6.3e-08 62.8 50 62.0


User provided reference genes

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