Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4G01863 Striga asiatica HOM05D003169 ORTHO05D003700 1.1e-150 536.6 266 100.0
SGA_v2.0_scaffold186G40168 Striga asiatica HOM05D003169 ORTHO05D003700 8.4e-42 174.9 117 76.9
RcHm_v2.0_Chr5g0023151 Rosa chinensis HOM05D003169 ORTHO05D003700 1.2e-40 171.0 117 74.4
FvH4_3g13920 Fragaria vesca HOM05D003169 ORTHO05D003700 3.5e-40 169.5 117 73.5
FAN11G1789 Fragaria x ananassa HOM05D003169 ORTHO05D003700 3.5e-40 169.5 117 73.5
FAN16G1231 Fragaria x ananassa HOM05D003169 ORTHO05D003700 3.5e-40 169.5 117 73.5
Haze_18485 Corylus avellana HOM05D003169 ORTHO05D003700 4.6e-40 169.1 117 73.5
FAN21G1262 Fragaria x ananassa HOM05D003169 ORTHO05D003700 4.6e-40 169.1 117 72.6
Gohir.A13G126700 Gossypium hirsutum HOM05D003169 ORTHO05D003700 4.6e-40 169.1 117 72.6
Hma1.2p1_0754F.1_g213010 Hydrangea macrophylla HOM05D003169 ORTHO05D003700 6.0e-40 168.7 115 73.0
Cfa017765 Carpinus fangiana HOM05D003169 ORTHO05D003700 1.0e-39 167.9 117 72.6
Dinv42454 Davidia involucrata HOM05D003169 ORTHO05D003700 1.0e-39 167.9 115 73.0
FAN25G3213 Fragaria x ananassa HOM05D003169 ORTHO05D003700 1.0e-39 167.9 117 72.6
Gohir.D13G130400 Gossypium hirsutum HOM05D003169 ORTHO05D003700 1.3e-39 167.5 117 71.8
Gorai.013G146500 Gossypium raimondii HOM05D003169 ORTHO05D003700 1.3e-39 167.5 117 71.8
Cc00_g09110 Coffea canephora HOM05D003169 ORTHO05D003700 1.8e-39 167.2 117 72.6
MSTRG.7098 Avicennia marina HOM05D003169 ORTHO05D003700 3.0e-39 166.4 117 71.8
Nn7g38410 Nelumbo nucifera HOM05D003169 ORTHO05D003700 3.0e-39 166.4 115 71.3
Migut.M01496 Erythranthe guttata HOM05D003169 ORTHO05D003700 3.9e-39 166.0 117 73.5
Peaxi162Scf00670g00216 Petunia axillaris HOM05D003169 ORTHO05D003700 5.1e-39 165.6 115 72.2
Thecc.07G189500 Theobroma cacao HOM05D003169 ORTHO05D003700 5.1e-39 165.6 117 70.9
Prupe.4G126100 Prunus persica HOM05D003169 ORTHO05D003700 8.7e-39 164.9 115 72.2
VMungo1127G0472 Vigna mungo HOM05D003169 ORTHO05D003700 1.5e-38 164.1 117 70.1
ECA240G3251 Erigeron canadensis HOM05D003169 ORTHO05D003700 1.9e-38 163.7 117 70.1
Glyma.15G219200 Glycine max HOM05D003169 ORTHO05D003700 1.9e-38 163.7 117 70.9
QL04p095761 Quercus lobata HOM05D003169 ORTHO05D003700 1.9e-38 163.7 115 71.3
Duzib213G0284 Durio zibethinus HOM05D003169 ORTHO05D003700 2.5e-38 163.3 117 70.1
MD10G1218000 Malus domestica HOM05D003169 ORTHO05D003700 2.5e-38 163.3 117 70.9
Rhsim06G0244800 Rhododendron simsii HOM05D003169 ORTHO05D003700 2.5e-38 163.3 115 71.3
Oeu005060.1 Olea europaea HOM05D003169 ORTHO05D003700 3.3e-38 162.9 117 70.1
Oeu005061.1 Olea europaea HOM05D003169 ORTHO05D003700 3.3e-38 162.9 117 70.1
TAR629G1197 Trochodendron aralioides HOM05D003169 ORTHO05D003700 3.3e-38 162.9 115 71.3
Medtr6g091930 Medicago truncatula HOM05D003169 ORTHO05D003700 4.3e-38 162.5 117 70.1
Phvul.011G180100 Phaseolus vulgaris HOM05D003169 ORTHO05D003700 4.3e-38 162.5 117 70.1
Sc06g0001640 Simmondsia chinensis HOM05D003169 ORTHO05D003700 4.3e-38 162.5 117 69.2
GSVIVG01036703001 Vitis vinifera HOM05D003169 ORTHO05D003700 4.3e-38 162.5 115 71.3
Medtr2g063620 Medicago truncatula HOM05D003169 ORTHO05D003700 5.7e-38 162.2 117 70.1
Atru.chr1.22 Acer truncatum HOM05D003169 ORTHO05D003700 7.4e-38 161.8 117 69.2
Glyma.08G233702 Glycine max HOM05D003169 ORTHO05D003700 7.4e-38 161.8 117 70.9
Ca_03187_v3 Cicer arietinum L. HOM05D003169 ORTHO05D003700 9.7e-38 161.4 117 69.2
Psat0s11g0040 Pisum sativum HOM05D003169 ORTHO05D003700 9.7e-38 161.4 117 68.4
Potri.010G174900 Populus trichocarpa HOM05D003169 ORTHO05D003700 9.7e-38 161.4 117 70.1
TWI38G0104 Tripterygium wilfordii HOM05D003169 ORTHO05D003700 9.7e-38 161.4 117 70.1
TWI38G0597 Tripterygium wilfordii HOM05D003169 ORTHO05D003700 9.7e-38 161.4 117 70.1
Aqoxy1G01380 Aquilegia oxysepala HOM05D003169 ORTHO05D003700 1.3e-37 161.0 115 69.6
Medtr8g447090 Medicago truncatula HOM05D003169 ORTHO05D003700 1.3e-37 161.0 117 69.2
Oeu025996.1 Olea europaea HOM05D003169 ORTHO05D003700 1.3e-37 161.0 116 69.8
MELO3C019615.2 Cucumis melo HOM05D003169 ORTHO05D003700 1.6e-37 160.6 117 69.2
MD05G1239900 Malus domestica HOM05D003169 ORTHO05D003700 1.6e-37 160.6 117 70.1
Lj3g0024633 Lotus japonicus HOM05D003169 ORTHO05D003700 2.2e-37 160.2 117 67.5
Medtr2g063813 Medicago truncatula HOM05D003169 ORTHO05D003700 2.2e-37 160.2 117 69.2
Medtr6g091960 Medicago truncatula HOM05D003169 ORTHO05D003700 2.2e-37 160.2 117 69.2
Peaxi162Scf00420g00518 Petunia axillaris HOM05D003169 ORTHO05D003700 2.2e-37 160.2 114 70.2
Potri.008G081200 Populus trichocarpa HOM05D003169 ORTHO05D003700 3.7e-37 159.5 117 70.1
Solyc10g005490.4 Solanum lycopersicum HOM05D003169 ORTHO05D003700 3.7e-37 159.5 115 68.7
Sopen10g001470 Solanum pennellii HOM05D003169 ORTHO05D003700 3.7e-37 159.5 115 68.7
TPR.G3619 Trifolium pratense HOM05D003169 ORTHO05D003700 3.7e-37 159.5 120 66.7
Eucgr.F04478 Eucalyptus grandis HOM05D003169 ORTHO05D003700 6.3e-37 158.7 117 67.5
CSS0011288 Camellia sinensis var. sinensis HOM05D003169 ORTHO05D003700 8.2e-37 158.3 115 70.4
Ca_22977_v3 Cicer arietinum L. HOM05D003169 ORTHO05D003700 8.2e-37 158.3 116 68.1
Lj2A8G63 Lonicera japonica HOM05D003169 ORTHO05D003700 8.2e-37 158.3 117 68.4
Oeu029454.1 Olea europaea HOM05D003169 ORTHO05D003700 8.2e-37 158.3 115 70.4
Sed0006985 Sechium edule HOM05D003169 ORTHO05D003700 8.2e-37 158.3 117 66.7
TPR.G30141 Trifolium pratense HOM05D003169 ORTHO05D003700 8.2e-37 158.3 117 67.5
unitig_32.g11074 Utricularia gibba HOM05D003169 ORTHO05D003700 8.2e-37 158.3 117 68.4
arahy.Tifrunner.gnm1.ann1.0T77JN Arachis hypogaea HOM05D003169 ORTHO05D003700 1.4e-36 157.5 117 66.7
arahy.Tifrunner.gnm1.ann1.4D9FZH Arachis hypogaea HOM05D003169 ORTHO05D003700 1.4e-36 157.5 117 66.7
Lalb_Chr19g0133151 Lupinus albus HOM05D003169 ORTHO05D003700 1.4e-36 157.5 131 64.9
vmacro22494 Vaccinium macrocarpon HOM05D003169 ORTHO05D003700 1.4e-36 157.5 115 69.6
ATR0794G028 Amborella trichopoda HOM05D003169 ORTHO05D003700 1.8e-36 157.1 117 65.0
AT1G79350 Arabidopsis thaliana HOM05D003169 ORTHO05D003700 1.8e-36 157.1 120 65.8
CiPaw.15G112000 Carya illinoinensis HOM05D003169 ORTHO05D003700 1.8e-36 157.1 116 69.0
Ciclev10004277m.g Citrus clementina HOM05D003169 ORTHO05D003700 1.8e-36 157.1 117 68.4
PGR031G0700 Punica granatum HOM05D003169 ORTHO05D003700 1.8e-36 157.1 117 68.4
A07p44430 Brassica napus HOM05D003169 ORTHO05D003700 2.4e-36 156.8 117 66.7
CsaV3_6G013370 Cucumis sativus L. HOM05D003169 ORTHO05D003700 2.4e-36 156.8 117 67.5
BcaB02g08679 Brassica carinata HOM05D003169 ORTHO05D003700 3.1e-36 156.4 120 65.8
BcaC08g47495 Brassica carinata HOM05D003169 ORTHO05D003700 3.1e-36 156.4 120 65.8
C06p53240 Brassica napus HOM05D003169 ORTHO05D003700 3.1e-36 156.4 120 65.8
Thhalv10018021m.g Eutrema salsugineum HOM05D003169 ORTHO05D003700 3.1e-36 156.4 120 65.8
Lsat_1_v5_gn_7_69060 Lactuca sativa HOM05D003169 ORTHO05D003700 3.1e-36 156.4 117 68.4
MBI18_g42879_MAGBIO Magnolia biondii HOM05D003169 ORTHO05D003700 3.1e-36 156.4 117 67.5
Aa31LG4G1680 Aethionema arabicum HOM05D003169 ORTHO05D003700 4.1e-36 156.0 120 65.0
Psat4g185200 Pisum sativum HOM05D003169 ORTHO05D003700 4.1e-36 156.0 117 65.8
THA.LOC104812392 Tarenaya hassleriana HOM05D003169 ORTHO05D003700 5.3e-36 155.6 120 66.7
BolC6t40342H Brassica oleracea HOM05D003169 ORTHO05D003700 6.9e-36 155.2 118 66.1
CAN.G492.81 Capsicum annuum HOM05D003169 ORTHO05D003700 6.9e-36 155.2 115 67.8
CARHR073010 Cardamine hirsuta HOM05D003169 ORTHO05D003700 6.9e-36 155.2 120 64.2
TAR627G0022 Trochodendron aralioides HOM05D003169 ORTHO05D003700 6.9e-36 155.2 115 67.8
HanXRQChr03g0077801 Helianthus annuus HOM05D003169 ORTHO05D003700 9.0e-36 154.8 131 64.9
Carub.0002s2621 Capsella rubella HOM05D003169 ORTHO05D003700 1.2e-35 154.5 120 65.0
Lalb_Chr20g0108381 Lupinus albus HOM05D003169 ORTHO05D003700 1.5e-35 154.1 115 67.8
Sabra10G0134700 Salix brachista HOM05D003169 ORTHO05D003700 3.4e-35 152.9 117 66.7
TPR.G3624 Trifolium pratense HOM05D003169 ORTHO05D003700 3.4e-35 152.9 120 63.3
BraA07t31952Z Brassica rapa HOM05D003169 ORTHO05D003700 4.5e-35 152.5 165 52.1
HanXRQChr13g0408921 Helianthus annuus HOM05D003169 ORTHO05D003700 5.9e-35 152.1 131 61.1
HanXRQChr13g0408941 Helianthus annuus HOM05D003169 ORTHO05D003700 5.9e-35 152.1 131 61.1
PSO541G6458 Papaver somniferum HOM05D003169 ORTHO05D003700 5.9e-35 152.1 115 65.2
PSO675G7315 Papaver somniferum HOM05D003169 ORTHO05D003700 5.9e-35 152.1 115 65.2
Sp5g34410 Schrenkiella parvula HOM05D003169 ORTHO05D003700 5.9e-35 152.1 120 64.2
DCAR_013706 Daucus carota HOM05D003169 ORTHO05D003700 7.6e-35 151.8 115 67.8
Rhsim02G0183500 Rhododendron simsii HOM05D003169 ORTHO05D003700 1.0e-34 151.4 134 63.4
DCAR_016853 Daucus carota HOM05D003169 ORTHO05D003700 2.9e-34 149.8 134 61.9
ClCG02G018810 Citrullus lanatus HOM05D003169 ORTHO05D003700 3.8e-34 149.4 110 69.1
Ah.16g106160 Amaranthus hybridus HOM05D003169 ORTHO05D003700 6.5e-34 148.7 131 60.3
HPP92_005947 Vanilla planifolia HOM05D003169 ORTHO05D003700 6.5e-34 148.7 115 67.0
arahy.Tifrunner.gnm1.ann1.THX68V Arachis hypogaea HOM05D003169 ORTHO05D003700 1.4e-33 147.5 120 62.5
CANSAT56G1976 Cannabis sativa HOM05D003169 ORTHO05D003700 1.9e-33 147.1 134 59.7
Zm00001eb430630 Zea mays HOM05D003169 ORTHO05D003700 1.9e-33 147.1 117 62.4
AUR62041054 Chenopodium quinoa HOM05D003169 ORTHO05D003700 2.5e-33 146.7 131 60.3
AUR62043014 Chenopodium quinoa HOM05D003169 ORTHO05D003700 2.5e-33 146.7 131 60.3
Lj3g0007581 Lotus japonicus HOM05D003169 ORTHO05D003700 4.2e-33 146.0 120 62.5
Manes.16G048930 Manihot esculenta HOM05D003169 ORTHO05D003700 4.2e-33 146.0 117 65.8
DCAR_013705 Daucus carota HOM05D003169 ORTHO05D003700 5.5e-33 145.6 120 62.5
arahy.Tifrunner.gnm1.ann1.JSN7JY Arachis hypogaea HOM05D003169 ORTHO05D003700 1.2e-32 144.4 120 61.7
EL10Ac2g03244 Beta vulgaris HOM05D003169 ORTHO05D003700 1.2e-32 144.4 131 60.3
Mapoly0153s0011 Marchantia polymorpha HOM05D003169 ORTHO05D003700 1.8e-31 140.6 120 58.3
Zm00001eb413950 Zea mays HOM05D003169 ORTHO05D003700 5.1e-31 139.0 115 60.0
Os08g0223700 Oryza sativa ssp. japonica HOM05D003169 ORTHO05D003700 1.1e-30 137.9 114 61.4
CSS0003080 Camellia sinensis var. sinensis HOM05D003169 ORTHO05D003700 1.5e-30 137.5 98 72.4
AagrBONN_evm.TU.Sc2ySwM_228.2486 Anthoceros agrestis HOM05D003169 ORTHO05D003700 2.2e-29 133.7 129 57.4
Pp3c3_5410 Physcomitrium patens HOM05D003169 ORTHO05D003700 2.2e-29 133.7 120 58.3
CBR_g11926 Chara braunii HOM05D003169 ORTHO05D000002 6.3e-29 132.1 115 56.5
Cpa.g.sc32.155 Carica papaya HOM05D003169 ORTHO05D003700 9.4e-25 118.2 91 67.0
Nitab4.5_0003291g0050 Nicotiana tabacum HOM05D003169 ORTHO05D003700 2.3e-23 113.6 92 66.3
Nitab4.5_0007774g0010 Nicotiana tabacum HOM05D003169 ORTHO05D003700 2.3e-23 113.6 92 66.3
MD07G1097900 Malus domestica HOM05D003169 ORTHO05D003700 2.6e-22 110.2 91 63.7
Actinidia26204 Actinidia chinensis HOM05D003169 ORTHO05D003700 3.3e-22 109.8 116 51.7
Haze_26591 Corylus avellana HOM05D003169 ORTHO05D003700 1.5e-19 100.9 115 47.0
TPR.G3613 Trifolium pratense HOM05D003169 ORTHO05D003700 7.7e-19 98.6 94 56.4
Cre01.g053250 Chlamydomonas reinhardtii HOM05D003169 ORTHO05D003700 1.6e-16 90.9 125 40.8
Cre02.g095045 Chlamydomonas reinhardtii HOM05D003169 ORTHO05D003700 1.6e-16 90.9 115 45.2
TPR.G373 Trifolium pratense HOM05D003169 ORTHO05D003700 8.0e-16 88.6 109 49.5
MCO01G648 Micromonas commoda HOM05D003169 ORTHO05D003700 6.7e-15 85.5 129 40.3
MCO16G570 Micromonas commoda HOM05D003169 ORTHO05D003700 3.7e-13 79.7 110 43.6
Cre07.g350100 Chlamydomonas reinhardtii HOM05D003169 ORTHO05D003700 4.8e-13 79.3 109 41.3
Cre13.g578501 Chlamydomonas reinhardtii HOM05D003169 ORTHO05D003700 1.1e-12 78.2 148 37.8
PRCOL_00005992 Prasinoderma coloniale HOM05D003169 ORTHO05D003700 4.1e-12 76.3 119 39.5
Potri.002G262101 Populus trichocarpa HOM05D003169 ORTHO05D003700 1.2e-08 64.7 54 57.4
SGA_v2.0_scaffold1000G53780 Striga asiatica HOM05D000047 ORTHO05D000044 2.0e-06 57.4 30 86.7


User provided reference genes

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