Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold49G18290 Striga asiatica HOM05D006296 ORTHO05D007777 5.5e-80 300.8 143 100.0
SalBow7G3743 Salvia bowleyana HOM05D006296 ORTHO05D007777 7.4e-61 237.3 175 66.3
Migut.M01153 Erythranthe guttata HOM05D006296 ORTHO05D007777 2.2e-60 235.7 143 72.7
MSTRG.15892 Avicennia marina HOM05D006296 ORTHO05D007777 1.8e-59 232.6 146 73.3
Cc02_g13190 Coffea canephora HOM05D006296 ORTHO05D007777 1.0e-57 226.9 144 73.6
Dinv07546 Davidia involucrata HOM05D006296 ORTHO05D007777 1.5e-56 223.0 144 69.4
Nitab4.5_0013250g0030 Nicotiana tabacum HOM05D006296 ORTHO05D007777 1.9e-56 222.6 144 70.1
Nitab4.5_0003942g0060 Nicotiana tabacum HOM05D006296 ORTHO05D007777 4.2e-56 221.5 144 70.1
HanXRQChr01g0003901 Helianthus annuus HOM05D006296 ORTHO05D007777 8.0e-55 217.2 144 66.7
Hma1.2p1_0126F.1_g059310 Hydrangea macrophylla HOM05D006296 ORTHO05D007777 1.8e-54 216.1 144 71.5
CSS0006104 Camellia sinensis var. sinensis HOM05D006296 ORTHO05D007777 5.2e-54 214.5 110 81.8
Solyc10g009040.4 Solanum lycopersicum HOM05D006296 ORTHO05D007777 1.2e-53 213.4 144 68.1
Sopen10g004820 Solanum pennellii HOM05D006296 ORTHO05D007777 1.2e-53 213.4 144 68.1
Aqoxy1G02520 Aquilegia oxysepala HOM05D006296 ORTHO05D007777 3.3e-53 211.8 145 67.6
Manes.16G026200 Manihot esculenta HOM05D006296 ORTHO05D007777 4.4e-53 211.5 144 66.0
Duzib160G0870 Durio zibethinus HOM05D006296 ORTHO05D007777 5.7e-53 211.1 146 71.2
EL10Ac8g20365 Beta vulgaris HOM05D006296 ORTHO05D007777 1.7e-52 209.5 144 63.9
Duzib235G1545 Durio zibethinus HOM05D006296 ORTHO05D007777 1.7e-52 209.5 143 70.6
Sc05g0007770 Simmondsia chinensis HOM05D006296 ORTHO05D007777 1.7e-52 209.5 145 64.8
Lsat_1_v5_gn_1_126121 Lactuca sativa HOM05D006296 ORTHO05D007777 2.8e-52 208.8 109 78.0
Hund21232 Selenicereus undatus HOM05D006296 ORTHO05D007777 1.1e-51 206.8 144 65.3
ECA247G1807 Erigeron canadensis HOM05D006296 ORTHO05D007777 1.8e-51 206.1 144 64.6
TWI38G1090 Tripterygium wilfordii HOM05D006296 ORTHO05D007777 2.4e-51 205.7 145 66.2
RcHm_v2.0_Chr5g0008131 Rosa chinensis HOM05D006296 ORTHO05D007777 5.3e-51 204.5 116 76.7
FAN21G3093 Fragaria x ananassa HOM05D006296 ORTHO05D007777 9.1e-51 203.8 116 75.9
Thecc.06G189800 Theobroma cacao HOM05D006296 ORTHO05D007777 9.1e-51 203.8 146 64.4
Gohir.D06G131300 Gossypium hirsutum HOM05D006296 ORTHO05D007777 1.2e-50 203.4 145 63.4
Gorai.010G153200 Gossypium raimondii HOM05D006296 ORTHO05D007777 1.2e-50 203.4 145 63.4
Gohir.A06G126500 Gossypium hirsutum HOM05D006296 ORTHO05D007777 1.6e-50 203.0 145 63.4
Lj6g0008813 Lotus japonicus HOM05D006296 ORTHO05D007777 2.0e-50 202.6 132 66.7
FvH4_3g09420 Fragaria vesca HOM05D006296 ORTHO05D007777 2.7e-50 202.2 116 75.9
unitig_22.g6746 Utricularia gibba HOM05D006296 ORTHO05D007777 3.5e-50 201.8 112 72.3
CiPaw.10G047400 Carya illinoinensis HOM05D006296 ORTHO05D007777 5.9e-50 201.1 110 75.5
QL05p039836 Quercus lobata HOM05D006296 ORTHO05D007777 3.8e-49 198.4 118 74.6
PSO675G2929 Papaver somniferum HOM05D006296 ORTHO05D007777 5.0e-49 198.0 147 62.6
MD10G1295500 Malus domestica HOM05D006296 ORTHO05D007777 8.5e-49 197.2 117 74.4
FAN11G0154 Fragaria x ananassa HOM05D006296 ORTHO05D007777 1.5e-48 196.4 124 71.0
THA.LOC104812881 Tarenaya hassleriana HOM05D006296 ORTHO05D007777 1.9e-48 196.1 146 65.8
CsaV3_6G050070 Cucumis sativus L. HOM05D006296 ORTHO05D007777 2.5e-48 195.7 145 64.8
MD05G1314200 Malus domestica HOM05D006296 ORTHO05D007777 3.2e-48 195.3 116 74.1
BcaC09g51212 Brassica carinata HOM05D006296 ORTHO05D007777 4.2e-48 194.9 143 63.6
A01p13040 Brassica napus HOM05D006296 ORTHO05D007777 4.2e-48 194.9 143 63.6
C01p15710 Brassica napus HOM05D006296 ORTHO05D007777 4.2e-48 194.9 143 63.6
BolC1t01524H Brassica oleracea HOM05D006296 ORTHO05D007777 4.2e-48 194.9 143 63.6
BraA01t01246Z Brassica rapa HOM05D006296 ORTHO05D007777 4.2e-48 194.9 143 63.6
FAN08G1739 Fragaria x ananassa HOM05D006296 ORTHO05D007777 4.2e-48 194.9 112 75.0
arahy.Tifrunner.gnm1.ann1.6I4RI9 Arachis hypogaea HOM05D006296 ORTHO05D007777 5.5e-48 194.5 132 65.2
Sp7g19880 Schrenkiella parvula HOM05D006296 ORTHO05D007777 7.2e-48 194.1 135 62.2
MELO3C007289.2 Cucumis melo HOM05D006296 ORTHO05D007777 9.4e-48 193.7 145 64.1
Nitab4.5_0002158g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 9.4e-48 193.7 117 69.2
Cfa000430 Carpinus fangiana HOM05D006296 ORTHO05D007777 2.1e-47 192.6 143 65.7
Eucgr.D00634 Eucalyptus grandis HOM05D006296 ORTHO05D007777 2.7e-47 192.2 102 75.5
Phvul.006G187000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 3.6e-47 191.8 132 62.9
Potri.004G041700 Populus trichocarpa HOM05D006296 ORTHO05D007777 3.6e-47 191.8 144 64.6
Rhsim13G0176800 Rhododendron simsii HOM05D006296 ORTHO05D007777 3.6e-47 191.8 119 69.7
Lalb_Chr16g0383701 Lupinus albus HOM05D006296 ORTHO05D007777 4.7e-47 191.4 113 69.9
Peaxi162Scf00530g00219 Petunia axillaris HOM05D006296 ORTHO05D007777 4.7e-47 191.4 184 51.6
BcaNung00841 Brassica carinata HOM05D006296 ORTHO05D007777 6.1e-47 191.0 143 62.2
VMungo0251G3500 Vigna mungo HOM05D006296 ORTHO05D007777 6.1e-47 191.0 134 61.9
BcaC06g30674 Brassica carinata HOM05D006296 ORTHO05D007777 8.0e-47 190.7 143 61.5
A03p52890 Brassica napus HOM05D006296 ORTHO05D007777 8.0e-47 190.7 143 61.5
BraA03t14365Z Brassica rapa HOM05D006296 ORTHO05D007777 8.0e-47 190.7 143 61.5
Thhalv10026538m.g Eutrema salsugineum HOM05D006296 ORTHO05D007777 8.0e-47 190.7 135 62.2
Os04g0680300 Oryza sativa ssp. japonica HOM05D006296 ORTHO05D007777 1.4e-46 189.9 143 62.2
TPR.G12044 Trifolium pratense HOM05D006296 ORTHO05D007777 1.4e-46 189.9 116 69.8
BcaNung00839 Brassica carinata HOM05D006296 ORTHO05D007777 1.8e-46 189.5 143 60.8
CiPaw.09G058300 Carya illinoinensis HOM05D006296 ORTHO05D007777 2.3e-46 189.1 144 61.8
Medtr4g088930 Medicago truncatula HOM05D006296 ORTHO05D007777 2.3e-46 189.1 113 70.8
Psat7g112640 Pisum sativum HOM05D006296 ORTHO05D007777 2.3e-46 189.1 118 68.6
Glyma.13G180700 Glycine max HOM05D006296 ORTHO05D007777 5.2e-46 188.0 110 73.6
AL7G32220 Arabidopsis lyrata HOM05D006296 ORTHO05D007777 8.8e-46 187.2 143 61.5
Prupe.4G044900 Prunus persica HOM05D006296 ORTHO05D007777 1.2e-45 186.8 110 74.5
Migut.H01493 Erythranthe guttata HOM05D006296 ORTHO05D007777 2.0e-45 186.0 116 64.7
Ca_18536_v3 Cicer arietinum L. HOM05D006296 ORTHO05D007777 2.6e-45 185.7 102 70.6
Glyma.07G195600 Glycine max HOM05D006296 ORTHO05D007777 2.6e-45 185.7 144 63.2
Nn1g04048 Nelumbo nucifera HOM05D006296 ORTHO05D007777 2.6e-45 185.7 132 63.6
BcaNung02241 Brassica carinata HOM05D006296 ORTHO05D007777 3.4e-45 185.3 95 77.9
CARHR228450 Cardamine hirsuta HOM05D006296 ORTHO05D007777 3.4e-45 185.3 131 58.8
FAN18G2724 Fragaria x ananassa HOM05D006296 ORTHO05D007777 5.7e-45 184.5 128 65.6
SEGI_22799 Sequoiadendron giganteum HOM05D006296 ORTHO05D007777 1.3e-44 183.3 147 57.1
Solyc02g078430.3 Solanum lycopersicum HOM05D006296 ORTHO05D007777 2.2e-44 182.6 116 64.7
Sopen02g023280 Solanum pennellii HOM05D006296 ORTHO05D007777 3.7e-44 181.8 116 64.7
Zm00001eb065930 Zea mays HOM05D006296 ORTHO05D007777 1.8e-43 179.5 151 55.6
CANSAT35G0041 Cannabis sativa HOM05D006296 ORTHO05D007777 2.4e-43 179.1 116 69.8
Carub.0007s1968 Capsella rubella HOM05D006296 ORTHO05D007777 3.1e-43 178.7 144 54.9
Aa31LG6G3700 Aethionema arabicum HOM05D006296 ORTHO05D007777 7.0e-43 177.6 162 52.5
AT4G21720 Arabidopsis thaliana HOM05D006296 ORTHO05D007777 7.0e-43 177.6 143 58.7
CAN.G1164.13 Capsicum annuum HOM05D006296 ORTHO05D007777 7.0e-43 177.6 110 66.4
Nn1g06589 Nelumbo nucifera HOM05D006296 ORTHO05D007777 1.2e-42 176.8 91 78.0
Atru.chr10.1908 Acer truncatum HOM05D006296 ORTHO05D007777 2.0e-42 176.0 115 65.2
DCAR_018474 Daucus carota HOM05D006296 ORTHO05D007777 2.0e-42 176.0 115 67.8
HPP92_014805 Vanilla planifolia HOM05D006296 ORTHO05D007777 4.5e-42 174.9 144 55.6
PSO541G0808 Papaver somniferum HOM05D006296 ORTHO05D007777 5.9e-42 174.5 188 48.9
Nitab4.5_0005954g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 7.7e-42 174.1 117 65.8
PGR004G1731 Punica granatum HOM05D006296 ORTHO05D007777 7.7e-42 174.1 145 60.7
Oeu005074.1 Olea europaea HOM05D006296 ORTHO05D007777 3.3e-40 168.7 125 68.0
VMungo0540G1954 Vigna mungo HOM05D006296 ORTHO05D007777 5.5e-40 167.9 139 57.6
Peaxi162Scf00736g00313 Petunia axillaris HOM05D006296 ORTHO05D007777 9.5e-40 167.2 116 66.4
Lj2A287T56 Lonicera japonica HOM05D006296 ORTHO05D007777 2.0e-37 159.5 102 67.6
Ciclev10017521m.g Citrus clementina HOM05D006296 ORTHO05D007777 2.6e-37 159.1 78 83.3
arahy.Tifrunner.gnm1.ann1.F25ZWM Arachis hypogaea HOM05D006296 ORTHO05D007777 7.0e-35 151.0 78 78.2
Phvul.002G228000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 1.6e-34 149.8 136 53.7
ATR0680G190 Amborella trichopoda HOM05D006296 ORTHO05D007777 6.6e-33 144.4 117 54.7
Actinidia25618 Actinidia chinensis HOM05D006296 ORTHO05D007777 8.6e-33 144.1 90 72.2
Sed0007841 Sechium edule HOM05D006296 ORTHO05D007777 1.9e-32 142.9 129 55.0
Sabra11G0035100 Salix brachista HOM05D006296 ORTHO05D007777 4.3e-32 141.7 152 48.7
GSVIVG01002932001 Vitis vinifera HOM05D006296 ORTHO05D007777 8.0e-31 137.5 90 67.8
AUR62014802 Chenopodium quinoa HOM05D006296 ORTHO05D007777 1.1e-27 127.1 100 61.0
AUR62016993 Chenopodium quinoa HOM05D006296 ORTHO05D007777 2.0e-26 122.9 100 59.0
Actinidia07582 Actinidia chinensis HOM05D006296 ORTHO05D007777 3.5e-26 122.1 75 72.0
AagrBONN_evm.TU.Sc2ySwM_362.1174 Anthoceros agrestis HOM05D006296 ORTHO05D007777 3.3e-24 115.5 103 47.6
FvH4_5g20990 Fragaria vesca HOM05D006296 ORTHO05D007777 3.3e-24 115.5 81 66.7
Sabra04G0025800 Salix brachista HOM05D006296 ORTHO05D007777 7.3e-24 114.4 106 55.7
COL.COLO4_31494 Corchorus olitorius HOM05D005098 ORTHO05D006646 1.6e-23 113.2 97 60.8
CDE04G3708 Ceratophyllum demersum HOM05D006296 ORTHO05D007777 6.8e-22 107.8 100 58.0
ClCG00G005210 Citrullus lanatus HOM05D006296 ORTHO05D007777 8.9e-22 107.5 101 57.4
ClCG01G022900 Citrullus lanatus HOM05D006296 ORTHO05D007777 8.9e-22 107.5 101 57.4
PGSC0003DMG400022442 Solanum tuberosum HOM05D006296 ORTHO05D007777 2.8e-15 85.9 70 52.9
Sed0020533 Sechium edule HOM05D006296 ORTHO05D007777 8.1e-15 84.3 99 44.4
Haze_06487 Corylus avellana HOM05D006296 ORTHO05D007777 2.1e-10 69.7 43 69.8
Cpa.g.sc27.57 Carica papaya HOM05D006296 ORTHO05D007777 8.9e-06 54.3 69 43.5


User provided reference genes

Program Settings