Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold49G18271 Striga asiatica HOM05D000538 ORTHO05D000614 4.4e-179 631.3 358 100.0
SGA_v2.0_scaffold159G37712 Striga asiatica HOM05D000538 ORTHO05D000614 3.4e-22 110.2 255 30.6
Lj2C275T5 Lonicera japonica HOM05D000538 ORTHO05D000614 2.7e-11 73.9 135 28.1
MELO3C027126.2 Cucumis melo HOM05D000538 ORTHO05D000614 2.3e-10 70.9 248 25.8
MSTRG.13164 Avicennia marina HOM05D000538 ORTHO05D000614 5.1e-10 69.7 290 24.5
SalBow5G1539 Salvia bowleyana HOM05D000538 ORTHO05D000614 1.1e-09 68.6 184 28.3
Dinv18944 Davidia involucrata HOM05D000538 ORTHO05D000614 2.6e-09 67.4 100 34.0
CsaV3_6G049420 Cucumis sativus L. HOM05D000538 ORTHO05D000614 3.3e-09 67.0 287 24.4
Sed0011252 Sechium edule HOM05D000538 ORTHO05D000614 7.4e-09 65.9 303 22.1
unitig_8.g3763 Utricularia gibba HOM05D000538 ORTHO05D000614 1.7e-08 64.7 317 22.4
SalBow6G4402 Salvia bowleyana HOM05D000538 ORTHO05D000614 4.8e-08 63.2 152 28.9
SalBow6G5108 Salvia bowleyana HOM05D000538 ORTHO05D000614 4.8e-08 63.2 152 28.9
Nitab4.5_0000786g0080 Nicotiana tabacum HOM05D000538 ORTHO05D000614 1.4e-07 61.6 188 25.0
Oeu063070.2 Olea europaea HOM05D000538 ORTHO05D000614 1.4e-07 61.6 160 26.9
TAR629G2738 Trochodendron aralioides HOM05D000538 ORTHO05D000614 1.4e-07 61.6 121 28.9
RcHm_v2.0_Chr5g0004541 Rosa chinensis HOM05D000538 ORTHO05D000614 1.8e-07 61.2 103 33.0
TWI39G0036 Tripterygium wilfordii HOM05D000538 ORTHO05D000614 1.8e-07 61.2 136 30.1
FAN21G0633 Fragaria x ananassa HOM05D000538 ORTHO05D000614 2.4e-07 60.8 254 20.9
FAN21G1131 Fragaria x ananassa HOM05D000538 ORTHO05D000614 2.4e-07 60.8 254 20.9
Atru.chr1.3753 Acer truncatum HOM05D000538 ORTHO05D000614 3.1e-07 60.5 101 31.7
MELO3C007351.2 Cucumis melo HOM05D000538 ORTHO05D000614 3.1e-07 60.5 236 25.0
ClCG01G022290 Citrullus lanatus HOM05D000538 ORTHO05D000614 4.1e-07 60.1 287 23.3
FvH4_3g02930 Fragaria vesca HOM05D000538 ORTHO05D000614 4.1e-07 60.1 312 21.5
Prupe.3G046700 Prunus persica HOM05D002395 ORTHO05D000614 4.1e-07 60.1 265 23.0
COL.COLO4_17402 Corchorus olitorius HOM05D000538 ORTHO05D000614 5.3e-07 59.7 161 26.1
Sed0014375 Sechium edule HOM05D000538 ORTHO05D000614 5.3e-07 59.7 335 23.6
CAN.G857.7 Capsicum annuum HOM05D000538 ORTHO05D000614 7.0e-07 59.3 125 29.6
Lsat_1_v5_gn_1_81901 Lactuca sativa HOM05D000538 ORTHO05D000614 7.0e-07 59.3 118 27.1
MD05G1335900 Malus domestica HOM05D000538 ORTHO05D000614 7.0e-07 59.3 143 26.6
HanXRQChr01g0019011 Helianthus annuus HOM05D000538 ORTHO05D000614 9.1e-07 58.9 137 29.2
Oeu051232.1 Olea europaea HOM05D000538 ORTHO05D000614 9.1e-07 58.9 145 26.9
Peaxi162Scf00030g00224 Petunia axillaris HOM05D000538 ORTHO05D000614 9.1e-07 58.9 167 25.7
Nitab4.5_0008264g0010 Nicotiana tabacum HOM05D000538 ORTHO05D000614 1.2e-06 58.5 131 27.5
Zm00001eb100610 Zea mays HOM05D000538 ORTHO05D000614 1.2e-06 58.5 153 30.1
Lsat_1_v5_gn_7_18320 Lactuca sativa HOM05D000538 ORTHO05D000614 1.5e-06 58.2 175 25.1
CANSAT54G1163 Cannabis sativa HOM05D000538 ORTHO05D000614 2.0e-06 57.8 146 28.8
FAN25G1625 Fragaria x ananassa HOM05D000538 ORTHO05D000614 2.0e-06 57.8 155 27.1
TWI38G1831 Tripterygium wilfordii HOM05D000538 ORTHO05D000614 2.0e-06 57.8 122 29.5
CiPaw.09G080200 Carya illinoinensis HOM05D000538 ORTHO05D000614 3.5e-06 57.0 153 29.4
TWI38G2228 Tripterygium wilfordii HOM05D000538 ORTHO05D000614 4.5e-06 56.6 98 30.6
Os08g0467600 Oryza sativa ssp. japonica HOM05D000538 ORTHO05D000614 5.9e-06 56.2 155 30.3
MSTRG.9015 Avicennia marina HOM05D000538 ORTHO05D000614 7.7e-06 55.8 111 29.7
DCAR_007740 Daucus carota HOM05D000538 ORTHO05D000614 7.7e-06 55.8 177 29.4
ECA248G3523 Erigeron canadensis HOM05D000538 ORTHO05D000614 7.7e-06 55.8 160 25.6


User provided reference genes

Program Settings