Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold49G18168 Striga asiatica HOM05D004382 ORTHO05D005181 1.6e-71 272.7 139 100.0
Oeu002809.1 Olea europaea HOM05D004382 ORTHO05D005181 1.0e-59 233.4 139 84.9
Nitab4.5_0002475g0030 Nicotiana tabacum HOM05D004382 ORTHO05D005181 5.2e-59 231.1 140 83.6
MSTRG.7052 Avicennia marina HOM05D004382 ORTHO05D005181 2.6e-58 228.8 140 84.3
PGSC0003DMG400022241 Solanum tuberosum HOM05D004382 ORTHO05D005181 2.6e-58 228.8 140 83.6
Migut.H01700 Erythranthe guttata HOM05D004382 ORTHO05D005181 4.4e-58 228.0 139 82.0
PGR142G2616 Punica granatum HOM05D004382 ORTHO05D005181 9.8e-58 226.9 139 81.3
CANSAT56G1367 Cannabis sativa HOM05D004382 ORTHO05D005181 1.7e-57 226.1 140 81.4
Peaxi162Scf00232g01129 Petunia axillaris HOM05D004382 ORTHO05D005181 2.8e-57 225.3 140 83.6
TWI38G0625 Tripterygium wilfordii HOM05D004382 ORTHO05D005181 3.7e-57 224.9 140 84.3
Solyc07g066310.3 Solanum lycopersicum HOM05D004382 ORTHO05D005181 4.9e-57 224.6 140 82.1
Sopen07g034490 Solanum pennellii HOM05D004382 ORTHO05D005181 4.9e-57 224.6 140 82.1
Potri.001G438700 Populus trichocarpa HOM05D004382 ORTHO05D005181 6.3e-57 224.2 139 81.3
Sabra11G0127600 Salix brachista HOM05D004382 ORTHO05D005181 8.3e-57 223.8 140 80.7
HanXRQChr05g0160651 Helianthus annuus HOM05D004382 ORTHO05D005181 1.8e-56 222.6 139 82.7
SalBow8G0430 Salvia bowleyana HOM05D004382 ORTHO05D005181 2.4e-56 222.2 139 80.6
Cc05_g15930 Coffea canephora HOM05D004382 ORTHO05D005181 4.1e-56 221.5 140 83.6
Glyma.08G173700 Glycine max HOM05D004382 ORTHO05D005181 4.1e-56 221.5 140 80.0
Nitab4.5_0000313g0040 Nicotiana tabacum HOM05D004382 ORTHO05D005181 4.1e-56 221.5 140 81.4
arahy.Tifrunner.gnm1.ann1.9QX17Y Arachis hypogaea HOM05D004382 ORTHO05D005181 5.4e-56 221.1 140 79.3
Prupe.4G143700 Prunus persica HOM05D004382 ORTHO05D005181 5.4e-56 221.1 140 81.4
GSVIVG01020484001 Vitis vinifera HOM05D004382 ORTHO05D005181 5.4e-56 221.1 140 82.9
CSS0016237 Camellia sinensis var. sinensis HOM05D004382 ORTHO05D005181 7.0e-56 220.7 136 80.1
CSS0001445 Camellia sinensis var. sinensis HOM05D004382 ORTHO05D005181 9.1e-56 220.3 138 81.9
Oeu003841.1 Olea europaea HOM05D004382 ORTHO05D005181 1.2e-55 219.9 141 81.6
VMungo1080G1647 Vigna mungo HOM05D004382 ORTHO05D005181 1.2e-55 219.9 140 79.3
arahy.Tifrunner.gnm1.ann1.HCTL36 Arachis hypogaea HOM05D004382 ORTHO05D005181 1.6e-55 219.5 140 79.3
CiPaw.11G067100 Carya illinoinensis HOM05D004382 ORTHO05D005181 1.6e-55 219.5 140 80.0
Nitab4.5_0000134g0030 Nicotiana tabacum HOM05D004382 ORTHO05D005181 1.6e-55 219.5 137 82.5
Peaxi162Scf00006g00149 Petunia axillaris HOM05D004382 ORTHO05D005181 1.6e-55 219.5 141 82.3
Potri.011G142200 Populus trichocarpa HOM05D004382 ORTHO05D005181 2.0e-55 219.2 139 79.1
HanXRQChr08g0232801 Helianthus annuus HOM05D004382 ORTHO05D005181 3.5e-55 218.4 139 81.3
Lalb_Chr01g0015971 Lupinus albus HOM05D004382 ORTHO05D005181 4.5e-55 218.0 133 82.7
FAN25G3309 Fragaria x ananassa HOM05D004382 ORTHO05D005181 5.9e-55 217.6 140 80.0
Glyma.15G253700 Glycine max HOM05D004382 ORTHO05D005181 5.9e-55 217.6 140 80.7
QL04p074767 Quercus lobata HOM05D004382 ORTHO05D005181 5.9e-55 217.6 138 79.7
TWI38G0568 Tripterygium wilfordii HOM05D004382 ORTHO05D005181 5.9e-55 217.6 140 82.1
Ciclev10022793m.g Citrus clementina HOM05D004382 ORTHO05D005181 1.0e-54 216.9 140 82.1
CsaV3_4G007600 Cucumis sativus L. HOM05D004382 ORTHO05D005181 1.3e-54 216.5 140 82.1
Medtr2g064650 Medicago truncatula HOM05D004382 ORTHO05D005181 1.3e-54 216.5 139 80.6
Actinidia37109 Actinidia chinensis HOM05D004382 ORTHO05D005181 2.3e-54 215.7 142 81.0
ClCG07G010700 Citrullus lanatus HOM05D004382 ORTHO05D005181 2.9e-54 215.3 140 81.4
FvH4_3g16050 Fragaria vesca HOM05D004382 ORTHO05D005181 2.9e-54 215.3 140 80.0
FAN11G1612 Fragaria x ananassa HOM05D004382 ORTHO05D005181 2.9e-54 215.3 140 80.0
Phvul.005G055200 Phaseolus vulgaris HOM05D004382 ORTHO05D005181 2.9e-54 215.3 140 77.9
EL10Ac4g08547 Beta vulgaris HOM05D004382 ORTHO05D005181 3.8e-54 214.9 140 79.3
AUR62004366 Chenopodium quinoa HOM05D004382 ORTHO05D005181 3.8e-54 214.9 141 79.4
Sed0014118 Sechium edule HOM05D004382 ORTHO05D005181 3.8e-54 214.9 140 80.7
CAN.G943.25 Capsicum annuum HOM05D004382 ORTHO05D005181 6.6e-54 214.2 140 82.1
FAN21G1818 Fragaria x ananassa HOM05D004382 ORTHO05D005181 6.6e-54 214.2 140 78.6
Sed0025739 Sechium edule HOM05D004382 ORTHO05D005181 6.6e-54 214.2 140 80.7
TPR.G10344 Trifolium pratense HOM05D004382 ORTHO05D005181 8.6e-54 213.8 139 79.9
AUR62022575 Chenopodium quinoa HOM05D004382 ORTHO05D005181 1.1e-53 213.4 141 78.7
MSTRG.14535 Avicennia marina HOM05D004382 ORTHO05D005181 2.5e-53 212.2 140 80.7
Gohir.A04G050200 Gossypium hirsutum HOM05D004382 ORTHO05D005181 2.5e-53 212.2 141 80.1
Lj3g0019499 Lotus japonicus HOM05D004382 ORTHO05D005181 2.5e-53 212.2 140 77.1
Psat1g002320 Pisum sativum HOM05D004382 ORTHO05D005181 2.5e-53 212.2 139 78.4
Ca_03704_v3 Cicer arietinum L. HOM05D004382 ORTHO05D005181 3.3e-53 211.8 139 77.7
A07p44190 Brassica napus HOM05D004382 ORTHO05D005181 4.3e-53 211.5 139 77.0
BraA07t31927Z Brassica rapa HOM05D004382 ORTHO05D005181 4.3e-53 211.5 139 77.0
Lalb_Chr03g0031561 Lupinus albus HOM05D004382 ORTHO05D005181 4.3e-53 211.5 142 74.6
BcaC03g15860 Brassica carinata HOM05D004382 ORTHO05D005181 5.6e-53 211.1 138 76.1
A02p22470 Brassica napus HOM05D004382 ORTHO05D005181 5.6e-53 211.1 138 76.1
C02p36150 Brassica napus HOM05D004382 ORTHO05D005181 5.6e-53 211.1 138 76.1
BolC2t09629H Brassica oleracea HOM05D004382 ORTHO05D005181 5.6e-53 211.1 138 76.1
BraA02t07252Z Brassica rapa HOM05D004382 ORTHO05D005181 5.6e-53 211.1 138 76.1
Aa31LG4G1950 Aethionema arabicum HOM05D004382 ORTHO05D005181 9.5e-53 210.3 140 75.7
Gohir.D05G330700 Gossypium hirsutum HOM05D004382 ORTHO05D005181 9.5e-53 210.3 141 78.7
Gorai.009G354500 Gossypium raimondii HOM05D004382 ORTHO05D005181 9.5e-53 210.3 141 78.7
MD05G1215200 Malus domestica HOM05D004382 ORTHO05D005181 9.5e-53 210.3 141 78.0
MD10G1198300 Malus domestica HOM05D004382 ORTHO05D005181 9.5e-53 210.3 141 77.3
BcaC08g47468 Brassica carinata HOM05D004382 ORTHO05D005181 1.2e-52 209.9 139 76.3
C06p52920 Brassica napus HOM05D004382 ORTHO05D005181 1.2e-52 209.9 139 76.3
BolC6t40310H Brassica oleracea HOM05D004382 ORTHO05D005181 1.2e-52 209.9 139 76.3
Hma1.2p1_0321F.1_g124500 Hydrangea macrophylla HOM05D004382 ORTHO05D005181 1.2e-52 209.9 140 79.3
SalBow5G1313 Salvia bowleyana HOM05D004382 ORTHO05D005181 1.2e-52 209.9 140 77.9
SalBow5G2519 Salvia bowleyana HOM05D004382 ORTHO05D005181 1.2e-52 209.9 140 77.9
A07p27340 Brassica napus HOM05D004382 ORTHO05D005181 1.6e-52 209.5 140 75.7
BraA07t30375Z Brassica rapa HOM05D004382 ORTHO05D005181 1.6e-52 209.5 140 75.7
Nn3g20146 Nelumbo nucifera HOM05D002089 ORTHO05D011346 2.1e-52 209.1 137 81.0
RcHm_v2.0_Chr5g0027021 Rosa chinensis HOM05D004382 ORTHO05D005181 2.1e-52 209.1 140 77.9
Atru.chr2.1854 Acer truncatum HOM05D004382 ORTHO05D005181 2.8e-52 208.8 140 80.7
Hma1.2p1_0193F.1_g084500 Hydrangea macrophylla HOM05D004382 ORTHO05D005181 2.8e-52 208.8 140 78.6
BcaB02g07194 Brassica carinata HOM05D004382 ORTHO05D005181 4.7e-52 208.0 140 75.0
ECA236G0888 Erigeron canadensis HOM05D004382 ORTHO05D005181 4.7e-52 208.0 139 74.8
BcaB02g08662 Brassica carinata HOM05D004382 ORTHO05D005181 6.1e-52 207.6 139 74.8
AT1G79040 Arabidopsis thaliana HOM05D004382 ORTHO05D005181 8.0e-52 207.2 139 75.5
Carub.0002s2591 Capsella rubella HOM05D004382 ORTHO05D005181 8.0e-52 207.2 139 75.5
CARHR072720 Cardamine hirsuta HOM05D004382 ORTHO05D005181 8.0e-52 207.2 141 75.9
Eucgr.F01447 Eucalyptus grandis HOM05D004382 ORTHO05D005181 1.0e-51 206.8 155 71.6
Thhalv10019302m.g Eutrema salsugineum HOM05D004382 ORTHO05D005181 1.0e-51 206.8 140 73.6
Lalb_Chr25g0285191 Lupinus albus HOM05D004382 ORTHO05D005181 1.4e-51 206.5 135 78.5
Ah.08g216320 Amaranthus hybridus HOM05D004382 ORTHO05D005181 1.8e-51 206.1 140 77.9
C06p30200 Brassica napus HOM05D004382 ORTHO05D005181 1.8e-51 206.1 140 74.3
BolC6t38183H Brassica oleracea HOM05D004382 ORTHO05D005181 1.8e-51 206.1 140 74.3
Manes.15G102500 Manihot esculenta HOM05D004382 ORTHO05D005181 1.8e-51 206.1 141 78.0
Potri.001G438800 Populus trichocarpa HOM05D004382 ORTHO05D005181 1.8e-51 206.1 139 74.8
BcaB05g25168 Brassica carinata HOM05D004382 ORTHO05D005181 2.3e-51 205.7 140 73.6
BcaC08g45389 Brassica carinata HOM05D004382 ORTHO05D005181 2.3e-51 205.7 140 74.3
Sp5g34090 Schrenkiella parvula HOM05D004382 ORTHO05D005181 2.3e-51 205.7 140 72.1
COL.COLO4_05073 Corchorus olitorius HOM05D004382 ORTHO05D005181 8.9e-51 203.8 142 78.9
unitig_8.g4771 Utricularia gibba HOM05D004382 ORTHO05D005181 8.9e-51 203.8 140 75.0
Nitab4.5_0001791g0030 Nicotiana tabacum HOM05D004382 ORTHO05D005181 1.5e-50 203.0 140 77.1
Aqoxy1G01569 Aquilegia oxysepala HOM05D004382 ORTHO05D005181 4.4e-50 201.4 141 75.2
ClCG11G016280 Citrullus lanatus HOM05D004382 ORTHO05D005181 9.8e-50 200.3 141 75.9
DCAR_009633 Daucus carota HOM05D004382 ORTHO05D005181 9.8e-50 200.3 141 74.5
Thecc.07G156900 Theobroma cacao HOM05D004382 ORTHO05D005181 9.8e-50 200.3 140 77.1
DCAR_013749 Daucus carota HOM05D004382 ORTHO05D005181 3.7e-49 198.4 139 74.1
Sc16g0003480 Simmondsia chinensis HOM05D004382 ORTHO05D005181 3.7e-49 198.4 139 76.3
Duzib187G1376 Durio zibethinus HOM05D004382 ORTHO05D005181 4.9e-49 198.0 140 75.7
vmacro09788 Vaccinium macrocarpon HOM05D004382 ORTHO05D005181 1.1e-48 196.8 142 75.4
AL2G39500 Arabidopsis lyrata HOM05D004382 ORTHO05D005181 3.2e-48 195.3 131 74.8
CDE04G0985 Ceratophyllum demersum HOM05D004382 ORTHO05D005181 3.2e-48 195.3 139 72.7
Hund10309 Selenicereus undatus HOM05D004382 ORTHO05D005181 4.1e-48 194.9 140 72.9
TAR627G0744 Trochodendron aralioides HOM05D004382 ORTHO05D005181 4.1e-48 194.9 135 77.8
Rhsim04G0006200 Rhododendron simsii HOM05D004382 ORTHO05D005181 5.4e-48 194.5 138 74.6
ATR1098G153 Amborella trichopoda HOM05D004382 ORTHO05D005181 9.2e-48 193.7 142 74.6
DCAR_016816 Daucus carota HOM05D004382 ORTHO05D005181 9.2e-48 193.7 139 73.4
MBI02_g25371_MAGBIO Magnolia biondii HOM05D004382 ORTHO05D005181 1.2e-47 193.4 141 73.0
Potri.011G142300 Populus trichocarpa HOM05D004382 ORTHO05D005181 1.2e-47 193.4 138 72.5
CDE12G0390 Ceratophyllum demersum HOM05D004382 ORTHO05D005181 1.6e-47 193.0 139 71.2
THA.LOC104812349 Tarenaya hassleriana HOM05D004382 ORTHO05D005181 1.6e-47 193.0 141 72.3
Gorai.002G032900 Gossypium raimondii HOM05D004382 ORTHO05D005181 2.3e-46 189.1 145 72.4
Manes.03G082900 Manihot esculenta HOM05D004382 ORTHO05D005181 2.3e-46 189.1 140 74.3
Solyc12g017250.2 Solanum lycopersicum HOM05D004382 ORTHO05D005181 3.9e-46 188.3 137 72.3
Sed0016780 Sechium edule HOM05D004382 ORTHO05D005181 5.0e-46 188.0 136 75.0
Sopen12g008070 Solanum pennellii HOM05D004382 ORTHO05D005181 6.6e-46 187.6 137 72.3
Gohir.A01G037100 Gossypium hirsutum HOM05D004382 ORTHO05D005181 1.2e-44 183.3 145 70.3
PSO541G3267 Papaver somniferum HOM05D004382 ORTHO05D005181 2.1e-44 182.6 140 70.0
PSO675G7775 Papaver somniferum HOM05D004382 ORTHO05D005181 2.1e-44 182.6 140 70.0
HPP92_016563 Vanilla planifolia HOM05D004382 ORTHO05D005181 1.0e-43 180.3 139 67.6
CDE11G0376 Ceratophyllum demersum HOM05D004382 ORTHO05D005181 4.0e-43 178.3 139 67.6
Os07g0147550 Oryza sativa ssp. japonica HOM05D004382 ORTHO05D005181 3.4e-42 175.3 140 62.9
Eucgr.F03186 Eucalyptus grandis HOM05D004382 ORTHO05D005181 1.3e-41 173.3 109 77.1
Zm00001eb171230 Zea mays HOM05D004382 ORTHO05D005181 2.2e-41 172.6 137 66.4
vmacro11652 Vaccinium macrocarpon HOM05D004382 ORTHO05D005181 1.4e-40 169.9 152 63.8
Lsat_1_v5_gn_7_116120 Lactuca sativa HOM05D004382 ORTHO05D005181 1.9e-40 169.5 139 64.7
Os08g0200300 Oryza sativa ssp. japonica HOM05D004382 ORTHO05D005181 5.4e-40 167.9 138 64.5
Sabra16G0296700 Salix brachista HOM05D004382 ORTHO05D005181 2.7e-39 165.6 158 59.5
Sabra11G0127700 Salix brachista HOM05D004382 ORTHO05D005181 1.3e-38 163.3 139 63.3
Os07g0147500 Oryza sativa ssp. japonica HOM05D004382 ORTHO05D005181 1.1e-37 160.2 138 60.1
Rhsim06G0237200 Rhododendron simsii HOM05D006828 ORTHO05D008312 1.5e-37 159.8 91 85.7
Dinv19628 Davidia involucrata HOM05D006828 ORTHO05D008312 2.3e-35 152.5 88 85.2
Mapoly0001s0109 Marchantia polymorpha HOM05D004382 ORTHO05D005181 8.9e-35 150.6 147 57.8
MBI18_g37150_MAGBIO Magnolia biondii HOM05D004382 ORTHO05D005181 1.5e-34 149.8 140 61.4
SMO134G0197 Selaginella moellendorffii HOM05D004382 ORTHO05D005181 2.0e-34 149.4 133 60.9
SEGI_14655 Sequoiadendron giganteum HOM05D004382 ORTHO05D005181 1.3e-33 146.7 117 65.8
Pp3c27_2340 Physcomitrium patens HOM05D004382 ORTHO05D005181 3.2e-32 142.1 139 57.6
Gohir.D01G024400 Gossypium hirsutum HOM05D004382 ORTHO05D005181 1.2e-31 140.2 114 68.4
Pp3c5_4230 Physcomitrium patens HOM05D004382 ORTHO05D005181 1.6e-31 139.8 140 57.1
MELO3C016181.2 Cucumis melo HOM05D004382 ORTHO05D005181 2.7e-31 139.0 90 81.1
Pp3c27_2320 Physcomitrium patens HOM05D004382 ORTHO05D005181 3.5e-31 138.7 131 59.5
PGSC0003DMG400002312 Solanum tuberosum HOM05D004382 ORTHO05D005181 3.5e-31 138.7 137 59.1
Pp3c16_5650 Physcomitrium patens HOM05D004382 ORTHO05D005181 1.0e-30 137.1 146 54.1
Cpa.g.c37194 Carica papaya HOM05D004382 ORTHO05D005181 1.7e-30 136.3 89 80.9
Mapoly0006s0055 Marchantia polymorpha HOM05D004382 ORTHO05D005181 1.7e-30 136.3 145 56.6
AagrBONN_evm.TU.Sc2ySwM_228.2640 Anthoceros agrestis HOM05D004382 ORTHO05D005181 1.9e-29 132.9 141 56.0
PGR083G0343 Punica granatum HOM05D004382 ORTHO05D005181 4.4e-26 121.7 81 71.6
PRCOL_00003342 Prasinoderma coloniale HOM05D004382 ORTHO05D005181 3.3e-21 105.5 132 43.9
Cpa.g.c38697 Carica papaya HOM05D004382 ORTHO05D005181 9.6e-21 104.0 53 90.6
CBR_g30109 Chara braunii HOM05D000004 ORTHO05D000002 3.6e-20 102.1 67 70.1
Atru.chr6.732 Acer truncatum HOM05D004382 ORTHO05D005181 4.4e-18 95.1 80 67.5
Haze_08525 Corylus avellana HOM05D004382 ORTHO05D005181 5.8e-18 94.7 140 45.0
TAR626G0945 Trochodendron aralioides HOM05D004382 ORTHO05D005181 1.4e-16 90.1 73 64.4
Cre06.g261000 Chlamydomonas reinhardtii HOM05D004382 ORTHO05D005181 2.7e-15 85.9 141 42.6
TPR.G25891 Trifolium pratense HOM05D004382 ORTHO05D005181 2.6e-10 69.3 135 42.2


User provided reference genes

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