Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold48G18033 Striga asiatica HOM05D004674 ORTHO05D051422 2.5e-121 438.7 214 100.0
SGA_v2.0_scaffold257G45676 Striga asiatica HOM05D004674 ORTHO05D051422 5.0e-37 158.7 86 88.4
SGA_v2.0_scaffold12G06320 Striga asiatica HOM05D004674 ORTHO05D007261 1.3e-24 117.5 125 51.2
TAR376G0765 Trochodendron aralioides HOM05D004674 ORTHO05D007261 6.6e-21 105.1 90 54.4
Migut.H02523 Erythranthe guttata HOM05D004674 ORTHO05D007261 7.3e-20 101.7 151 39.1
Oeu019445.1 Olea europaea HOM05D004674 ORTHO05D007261 2.1e-19 100.1 141 39.7
Hund16446 Selenicereus undatus HOM05D004674 ORTHO05D007261 1.1e-18 97.8 139 38.8
SalBow8G1271 Salvia bowleyana HOM05D004674 ORTHO05D007261 4.0e-18 95.9 125 41.6
Lj4g0022194 Lotus japonicus HOM05D004674 ORTHO05D007261 8.9e-18 94.7 125 38.4
Medtr8g076950 Medicago truncatula HOM05D004674 ORTHO05D007261 8.9e-18 94.7 125 40.0
Psat4g095640 Pisum sativum HOM05D004674 ORTHO05D007261 8.9e-18 94.7 125 40.0
Atru.chr3.699 Acer truncatum HOM05D004674 ORTHO05D007261 2.0e-17 93.6 142 38.0
MSTRG.2485 Avicennia marina HOM05D004674 ORTHO05D007261 2.0e-17 93.6 125 41.6
AUR62007603 Chenopodium quinoa HOM05D004674 ORTHO05D007261 2.0e-17 93.6 145 35.9
HanXRQChr09g0261191 Helianthus annuus HOM05D004674 ORTHO05D007261 2.0e-17 93.6 167 34.7
COL.COLO4_22030 Corchorus olitorius HOM05D004674 ORTHO05D007261 2.6e-17 93.2 132 41.7
Lsat_1_v5_gn_4_148020 Lactuca sativa HOM05D004674 ORTHO05D007261 3.4e-17 92.8 125 40.8
SalBow8G5199 Salvia bowleyana HOM05D004674 ORTHO05D007261 3.4e-17 92.8 125 40.8
CSS0017426 Camellia sinensis var. sinensis HOM05D004674 ORTHO05D007261 4.4e-17 92.4 125 40.8
CANSAT01G1299 Cannabis sativa HOM05D004674 ORTHO05D007261 4.4e-17 92.4 141 37.6
Cc07_g09910 Coffea canephora HOM05D004674 ORTHO05D007261 4.4e-17 92.4 125 40.0
Glyma.02G053800 Glycine max HOM05D004674 ORTHO05D007261 4.4e-17 92.4 136 37.5
Atru.chr3.652 Acer truncatum HOM05D004674 ORTHO05D007261 5.8e-17 92.0 142 38.0
Actinidia35628 Actinidia chinensis HOM05D004674 ORTHO05D007261 5.8e-17 92.0 136 37.5
ECA232G2544 Erigeron canadensis HOM05D004674 ORTHO05D000001 5.8e-17 92.0 125 41.6
Rhsim08G0121400 Rhododendron simsii HOM05D004674 ORTHO05D007261 5.8e-17 92.0 136 39.7
Prupe.7G158600 Prunus persica HOM05D004674 ORTHO05D007261 7.6e-17 91.7 152 34.9
VMungo0251G2099 Vigna mungo HOM05D004674 ORTHO05D007261 9.9e-17 91.3 142 37.3
unitig_60.g25534 Utricularia gibba HOM05D004674 ORTHO05D007261 1.7e-16 90.5 124 42.7
Ca_22335_v3 Cicer arietinum L. HOM05D004674 ORTHO05D007261 2.9e-16 89.7 125 38.4
Ciclev10024970m.g Citrus clementina HOM05D004674 ORTHO05D007261 2.9e-16 89.7 139 36.7
arahy.Tifrunner.gnm1.ann1.SG067W Arachis hypogaea HOM05D004674 ORTHO05D007261 4.9e-16 89.0 124 37.1
CiPaw.07G049300 Carya illinoinensis HOM05D004674 ORTHO05D007261 4.9e-16 89.0 152 36.2
ClCG01G019830 Citrullus lanatus HOM05D004674 ORTHO05D007261 4.9e-16 89.0 125 38.4
Solyc02g062560.3 Solanum lycopersicum HOM05D004674 ORTHO05D007261 4.9e-16 89.0 166 34.3
PGSC0003DMG400015491 Solanum tuberosum HOM05D004674 ORTHO05D007261 4.9e-16 89.0 125 40.8
Phvul.003G256400 Phaseolus vulgaris HOM05D004674 ORTHO05D007261 6.4e-16 88.6 125 39.2
Thecc.01G030000 Theobroma cacao HOM05D004674 ORTHO05D007261 6.4e-16 88.6 142 36.6
TAR376G0038 Trochodendron aralioides HOM05D004674 ORTHO05D007261 6.4e-16 88.6 125 38.4
TAR376G0875 Trochodendron aralioides HOM05D004674 ORTHO05D007261 6.4e-16 88.6 125 38.4
arahy.Tifrunner.gnm1.ann1.LKR1Y0 Arachis hypogaea HOM05D004674 ORTHO05D007261 8.4e-16 88.2 124 37.1
EL10As8g23909 Beta vulgaris HOM05D004674 ORTHO05D007261 8.4e-16 88.2 125 38.4
AUR62004091 Chenopodium quinoa HOM05D004674 ORTHO05D007261 8.4e-16 88.2 150 33.3
Lalb_Chr16g0391041 Lupinus albus HOM05D004674 ORTHO05D007261 8.4e-16 88.2 125 37.6
Sopen02g013570 Solanum pennellii HOM05D004674 ORTHO05D007261 8.4e-16 88.2 125 40.8
Cpa.g.sc6.166 Carica papaya HOM05D004674 ORTHO05D007261 1.1e-15 87.8 125 40.0
Nn5g29687 Nelumbo nucifera HOM05D004674 ORTHO05D007261 1.1e-15 87.8 141 35.5
TPR.G21548 Trifolium pratense HOM05D004674 ORTHO05D007261 1.1e-15 87.8 125 38.4
TWI09G0580 Tripterygium wilfordii HOM05D004674 ORTHO05D007261 1.1e-15 87.8 125 39.2
Dinv40019 Davidia involucrata HOM05D004674 ORTHO05D007261 1.9e-15 87.0 125 39.2
Eucgr.I02404 Eucalyptus grandis HOM05D004674 ORTHO05D007261 1.9e-15 87.0 136 36.8
Phvul.003G256200 Phaseolus vulgaris HOM05D004674 ORTHO05D007261 1.9e-15 87.0 125 38.4
CAN.G1019.6 Capsicum annuum HOM05D004674 ORTHO05D007261 2.4e-15 86.7 125 40.0
Sc16g0002550 Simmondsia chinensis HOM05D004674 ORTHO05D007261 2.4e-15 86.7 125 40.0
COL.COLO4_22029 Corchorus olitorius HOM05D004674 ORTHO05D007261 3.2e-15 86.3 125 39.2
FAN26G2871 Fragaria x ananassa HOM05D004674 ORTHO05D007261 3.2e-15 86.3 125 38.4
Peaxi162Scf00008g03325 Petunia axillaris HOM05D004674 ORTHO05D007261 3.2e-15 86.3 125 39.2
MELO3C010392.2 Cucumis melo HOM05D004674 ORTHO05D007261 4.1e-15 85.9 102 44.1
FAN23G0750 Fragaria x ananassa HOM05D004674 ORTHO05D007261 4.1e-15 85.9 125 38.4
Nitab4.5_0000136g0250 Nicotiana tabacum HOM05D004674 ORTHO05D007261 4.1e-15 85.9 125 39.2
Gorai.007G201200 Gossypium raimondii HOM05D004674 ORTHO05D007261 5.4e-15 85.5 142 36.6
Cfa006896 Carpinus fangiana HOM05D004674 ORTHO05D007261 7.1e-15 85.1 125 37.6
SEGI_40838 Sequoiadendron giganteum HOM05D004674 ORTHO05D007261 7.1e-15 85.1 125 38.4
THA.LOC104821303 Tarenaya hassleriana HOM05D004674 ORTHO05D007261 7.1e-15 85.1 121 40.5
CsaV3_6G046560 Cucumis sativus L. HOM05D004674 ORTHO05D007261 9.2e-15 84.7 125 37.6
Lj4A206G17 Lonicera japonica HOM05D004674 ORTHO05D007261 9.2e-15 84.7 124 38.7
Haze_03856 Corylus avellana HOM05D004674 ORTHO05D007261 1.2e-14 84.3 125 37.6
FAN28G0143 Fragaria x ananassa HOM05D004674 ORTHO05D007261 1.2e-14 84.3 125 37.6
ATR0568G133 Amborella trichopoda HOM05D004674 ORTHO05D007261 2.1e-14 83.6 125 38.4
Potri.007G021000 Populus trichocarpa HOM05D004674 ORTHO05D007261 2.7e-14 83.2 178 34.8
RcHm_v2.0_Chr2g0100861 Rosa chinensis HOM05D004674 ORTHO05D007261 2.7e-14 83.2 121 38.8
TWI09G0339 Tripterygium wilfordii HOM05D004674 ORTHO05D007261 2.7e-14 83.2 142 33.8
QL06p035429 Quercus lobata HOM05D004674 ORTHO05D007261 4.6e-14 82.4 141 34.8
Sabra07G0018000 Salix brachista HOM05D004674 ORTHO05D007261 4.6e-14 82.4 125 37.6
Aqoxy5G01578 Aquilegia oxysepala HOM05D004674 ORTHO05D007261 6.0e-14 82.0 125 36.8
CARHR034750 Cardamine hirsuta HOM05D004674 ORTHO05D007261 7.8e-14 81.6 121 39.7
Duzib264G1222 Durio zibethinus HOM05D004674 ORTHO05D007261 7.8e-14 81.6 125 39.2
Sed0001139 Sechium edule HOM05D004674 ORTHO05D007261 7.8e-14 81.6 125 36.8
Carub.0008s2809 Capsella rubella HOM05D004674 ORTHO05D007261 1.0e-13 81.3 121 38.8
QL06p035418 Quercus lobata HOM05D004674 ORTHO05D007261 1.0e-13 81.3 141 34.8
TAR376G0961 Trochodendron aralioides HOM05D004674 ORTHO05D007261 1.0e-13 81.3 125 37.6
Thhalv10003695m.g Eutrema salsugineum HOM05D004674 ORTHO05D007261 1.3e-13 80.9 121 38.8
Zm00001eb225760 Zea mays HOM05D004674 ORTHO05D007261 1.3e-13 80.9 125 36.8
Gohir.A11G182300 Gossypium hirsutum HOM05D004674 ORTHO05D007261 1.7e-13 80.5 125 38.4
AL8G45110 Arabidopsis lyrata HOM05D004674 ORTHO05D007261 3.0e-13 79.7 121 38.8
MD15G1256300 Malus domestica HOM05D004674 ORTHO05D007261 3.0e-13 79.7 125 35.2
BcaB02g10033 Brassica carinata HOM05D004674 ORTHO05D007261 8.6e-13 78.2 121 38.0
Gohir.D11G189100 Gossypium hirsutum HOM05D004674 ORTHO05D007261 1.1e-12 77.8 150 34.7
GSVIVG01018892001 Vitis vinifera HOM05D004674 ORTHO05D007261 1.1e-12 77.8 141 33.3
Nitab4.5_0001525g0030 Nicotiana tabacum HOM05D004674 ORTHO05D007261 1.5e-12 77.4 125 37.6
Aa31LG1G14940 Aethionema arabicum HOM05D004674 ORTHO05D007261 1.9e-12 77.0 121 37.2
AT5G66420 Arabidopsis thaliana HOM05D004674 ORTHO05D007261 1.9e-12 77.0 121 37.2
DCAR_017308 Daucus carota HOM05D004674 ORTHO05D007261 1.9e-12 77.0 125 32.8
Sp2g30300 Schrenkiella parvula HOM05D004674 ORTHO05D007261 2.5e-12 76.6 121 37.2
Gohir.A11G182500 Gossypium hirsutum HOM05D004674 ORTHO05D007261 3.3e-12 76.3 116 37.9
Potri.005G120100 Populus trichocarpa HOM05D004674 ORTHO05D007261 4.3e-12 75.9 126 34.9
Pp3c20_8030 Physcomitrium patens HOM05D004674 ORTHO05D007261 5.6e-12 75.5 146 33.6
PSO170G5809 Papaver somniferum HOM05D004674 ORTHO05D007261 1.6e-11 73.9 125 35.2
BcaC06g34697 Brassica carinata HOM05D004674 ORTHO05D007261 2.1e-11 73.6 122 36.9
PGR119G1113 Punica granatum HOM05D004674 ORTHO05D007261 2.8e-11 73.2 132 31.8
A07p17540 Brassica napus HOM05D004674 ORTHO05D007261 3.6e-11 72.8 121 37.2
C07p25500 Brassica napus HOM05D004674 ORTHO05D007261 3.6e-11 72.8 122 36.9
BraA07t29474Z Brassica rapa HOM05D004674 ORTHO05D007261 3.6e-11 72.8 121 37.2
BolC7t43070H Brassica oleracea HOM05D004674 ORTHO05D007261 6.2e-11 72.0 122 36.1
HPP92_004908 Vanilla planifolia HOM05D004674 ORTHO05D007261 1.8e-10 70.5 125 32.8
FvH4_1g12760 Fragaria vesca HOM05D004674 ORTHO05D007261 2.4e-10 70.1 113 36.3
FAN19G2260 Fragaria x ananassa HOM05D004674 ORTHO05D007261 3.1e-10 69.7 101 39.6
Glyma.16G133933 Glycine max HOM05D004674 ORTHO05D007261 3.1e-10 69.7 105 37.1
Gohir.D11G189150 Gossypium hirsutum HOM05D004674 ORTHO05D007261 4.0e-10 69.3 138 33.3
Gorai.007G201400 Gossypium raimondii HOM05D004674 ORTHO05D007261 4.0e-10 69.3 138 33.3
SGA_v2.0_scaffold834G53653 Striga asiatica HOM05D000004 ORTHO05D000002 6.9e-10 68.6 58 56.9
Actinidia19204 Actinidia chinensis HOM05D004674 ORTHO05D007261 1.5e-09 67.4 112 34.8
Os06g0472400 Oryza sativa ssp. japonica HOM05D004674 ORTHO05D007261 1.5e-09 67.4 125 34.4
Manes.02G097100 Manihot esculenta HOM05D004674 ORTHO05D007261 9.9e-09 64.7 51 56.9
Ca_07052_v3 Cicer arietinum L. HOM05D004674 ORTHO05D007261 8.4e-08 61.6 51 51.0
Ca_22377_v3 Cicer arietinum L. HOM05D004674 ORTHO05D007261 8.4e-08 61.6 51 51.0
SMO367G0601 Selaginella moellendorffii HOM05D004674 ORTHO05D007261 1.4e-07 60.8 137 30.7
Duzib147G1548 Durio zibethinus HOM05D004674 ORTHO05D007261 2.4e-07 60.1 51 51.0
SGA_v2.0_scaffold169G38721 Striga asiatica HOM05D002942 ORTHO05D003270 2.4e-07 60.1 164 28.0
PSO407G0425 Papaver somniferum HOM05D004674 ORTHO05D007261 3.2e-07 59.7 125 30.4
arahy.Tifrunner.gnm1.ann1.TV0A1X Arachis hypogaea HOM05D004674 ORTHO05D007261 1.2e-06 57.8 52 46.2
PSO170G6195 Papaver somniferum HOM05D004674 ORTHO05D007261 3.5e-06 56.2 133 30.8


User provided reference genes

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