Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold486G52389 Striga asiatica HOM05D006419 ORTHO05D008096 8.9e-157 557.0 301 100.0
SGA_v2.0_scaffold24G10498 Striga asiatica HOM05D006419 ORTHO05D008096 3.4e-47 193.0 98 94.9
Oeu032965.1 Olea europaea HOM05D006419 ORTHO05D008096 1.3e-43 181.0 98 87.8
SalBow8G2260 Salvia bowleyana HOM05D006419 ORTHO05D008096 6.6e-43 178.7 92 91.3
MSTRG.25406 Avicennia marina HOM05D006419 ORTHO05D008096 9.5e-42 174.9 98 87.8
Hund16966 Selenicereus undatus HOM05D006419 ORTHO05D008096 1.6e-41 174.1 98 84.7
MSTRG.1480 Avicennia marina HOM05D006419 ORTHO05D008096 2.1e-41 173.7 99 86.9
Oeu050256.1 Olea europaea HOM05D006419 ORTHO05D008096 2.1e-41 173.7 98 83.7
Cc02_g37090 Coffea canephora HOM05D006419 ORTHO05D008096 3.6e-41 172.9 98 85.7
HanXRQChr04g0126261 Helianthus annuus HOM05D006419 ORTHO05D008096 3.6e-41 172.9 98 84.7
GSVIVG01027592001 Vitis vinifera HOM05D006419 ORTHO05D008096 4.7e-41 172.6 98 84.7
Lsat_1_v5_gn_8_87621 Lactuca sativa HOM05D006419 ORTHO05D008096 6.2e-41 172.2 98 84.7
Migut.C01180 Erythranthe guttata HOM05D006419 ORTHO05D008096 1.8e-40 170.6 98 84.7
Sc23g0003380 Simmondsia chinensis HOM05D006419 ORTHO05D008096 3.1e-40 169.9 98 82.7
Aqoxy7G00481 Aquilegia oxysepala HOM05D006419 ORTHO05D008096 4.0e-40 169.5 98 84.7
THA.LOC104802008 Tarenaya hassleriana HOM05D006419 ORTHO05D008096 8.9e-40 168.3 98 84.7
Aa31LG1G27170 Aethionema arabicum HOM05D006419 ORTHO05D008096 1.2e-39 167.9 98 83.7
Hma1.2p1_0132F.1_g060780 Hydrangea macrophylla HOM05D006419 ORTHO05D008096 2.0e-39 167.2 98 80.6
Nitab4.5_0001127g0020 Nicotiana tabacum HOM05D006419 ORTHO05D008096 2.0e-39 167.2 98 82.7
Phvul.010G089300 Phaseolus vulgaris HOM05D006419 ORTHO05D008096 2.6e-39 166.8 98 83.7
VMungo0331G1339 Vigna mungo HOM05D006419 ORTHO05D008096 2.6e-39 166.8 96 83.3
Nitab4.5_0013229g0010 Nicotiana tabacum HOM05D006419 ORTHO05D008096 3.4e-39 166.4 98 81.6
CiPaw.01G257500 Carya illinoinensis HOM05D006419 ORTHO05D008096 4.4e-39 166.0 98 83.7
Rhsim07G0022300 Rhododendron simsii HOM05D006419 ORTHO05D008096 4.4e-39 166.0 99 83.8
Actinidia31456 Actinidia chinensis HOM05D006419 ORTHO05D008096 5.8e-39 165.6 98 82.7
EL10Ac1g00975 Beta vulgaris HOM05D006419 ORTHO05D008096 5.8e-39 165.6 99 82.8
ECA236G2030 Erigeron canadensis HOM05D002941 ORTHO05D007802 5.8e-39 165.6 96 84.4
Lalb_Chr10g0097581 Lupinus albus HOM05D006419 ORTHO05D008096 5.8e-39 165.6 98 83.7
PGSC0003DMG400000132 Solanum tuberosum HOM05D006419 ORTHO05D008096 7.6e-39 165.2 98 81.6
arahy.Tifrunner.gnm1.ann1.V3JJAU Arachis hypogaea HOM05D006419 ORTHO05D008096 9.9e-39 164.9 98 83.7
Cfa001844 Carpinus fangiana HOM05D006419 ORTHO05D008096 9.9e-39 164.9 98 81.6
Dinv32413 Davidia involucrata HOM05D006419 ORTHO05D008096 9.9e-39 164.9 99 84.8
Lalb_Chr17g0340031 Lupinus albus HOM05D006419 ORTHO05D008096 9.9e-39 164.9 98 83.7
Solyc01g091890.3 Solanum lycopersicum HOM05D006419 ORTHO05D008096 9.9e-39 164.9 98 81.6
Sopen01g037660 Solanum pennellii HOM05D006419 ORTHO05D008096 9.9e-39 164.9 98 81.6
Ca_23766_v3 Cicer arietinum L. HOM05D006419 ORTHO05D008096 1.3e-38 164.5 98 82.7
Peaxi162Scf00021g00237 Petunia axillaris HOM05D006419 ORTHO05D008096 1.3e-38 164.5 98 81.6
MELO3C022522.2 Cucumis melo HOM05D006419 ORTHO05D008096 1.7e-38 164.1 98 81.6
CsaV3_6G005910 Cucumis sativus L. HOM05D006419 ORTHO05D008096 1.7e-38 164.1 98 80.6
Dinv43747 Davidia involucrata HOM05D006419 ORTHO05D008096 1.7e-38 164.1 98 82.7
Prupe.1G200200 Prunus persica HOM05D006419 ORTHO05D008096 1.7e-38 164.1 92 84.8
Sabra14G0054000 Salix brachista HOM05D006419 ORTHO05D008096 2.2e-38 163.7 98 82.7
Thhalv10001692m.g Eutrema salsugineum HOM05D006419 ORTHO05D008096 2.9e-38 163.3 98 80.6
Lj1g0008204 Lotus japonicus HOM05D006419 ORTHO05D008096 2.9e-38 163.3 98 82.7
MBI04_g28569_MAGBIO Magnolia biondii HOM05D006419 ORTHO05D008096 2.9e-38 163.3 98 80.6
TWI59G0287 Tripterygium wilfordii HOM05D006419 ORTHO05D008096 2.9e-38 163.3 98 82.7
vmacro20977 Vaccinium macrocarpon HOM05D006419 ORTHO05D008096 2.9e-38 163.3 92 82.6
AT2G45695 Arabidopsis thaliana HOM05D006419 ORTHO05D008096 3.8e-38 162.9 100 81.0
Sp4g27740 Schrenkiella parvula HOM05D006419 ORTHO05D008096 3.8e-38 162.9 98 80.6
TAR636G0701 Trochodendron aralioides HOM05D006419 ORTHO05D008096 3.8e-38 162.9 98 80.6
Actinidia09582 Actinidia chinensis HOM05D006419 ORTHO05D008096 4.9e-38 162.5 98 81.6
ClCG06G000160 Citrullus lanatus HOM05D006419 ORTHO05D008096 6.4e-38 162.2 98 81.6
Nn6g34296 Nelumbo nucifera HOM05D006419 ORTHO05D008096 6.4e-38 162.2 97 79.4
TWI14G0146 Tripterygium wilfordii HOM05D006419 ORTHO05D008096 6.4e-38 162.2 98 81.6
CARHR140920 Cardamine hirsuta HOM05D006419 ORTHO05D008096 8.4e-38 161.8 98 79.6
FvH4_1g27190 Fragaria vesca HOM05D006419 ORTHO05D008096 8.4e-38 161.8 110 72.7
Manes.01G263100 Manihot esculenta HOM05D006419 ORTHO05D008096 8.4e-38 161.8 98 78.6
Sed0009830 Sechium edule HOM05D006419 ORTHO05D008096 8.4e-38 161.8 98 79.6
AL5G43350 Arabidopsis lyrata HOM05D006419 ORTHO05D008096 1.1e-37 161.4 98 79.6
BcaB01g03257 Brassica carinata HOM05D006419 ORTHO05D008096 1.1e-37 161.4 98 78.6
Medtr8g032860 Medicago truncatula HOM05D006419 ORTHO05D008096 1.1e-37 161.4 100 82.0
QL08p050901 Quercus lobata HOM05D006419 ORTHO05D008096 1.1e-37 161.4 91 84.6
Haze_16703 Corylus avellana HOM05D006419 ORTHO05D008096 1.4e-37 161.0 98 80.6
Duzib138G0401 Durio zibethinus HOM05D006419 ORTHO05D008096 1.4e-37 161.0 98 79.6
AT3G61113 Arabidopsis thaliana HOM05D006419 ORTHO05D008096 1.9e-37 160.6 92 82.6
Atru.chr5.383 Acer truncatum HOM05D006419 ORTHO05D008096 2.4e-37 160.2 98 79.6
Carub.0004s2835 Capsella rubella HOM05D006419 ORTHO05D008096 2.4e-37 160.2 100 80.0
PSO478G5220 Papaver somniferum HOM05D006419 ORTHO05D008096 3.2e-37 159.8 98 81.6
Potri.014G078200 Populus trichocarpa HOM05D006419 ORTHO05D008096 3.2e-37 159.8 98 80.6
RcHm_v2.0_Chr3g0487581 Rosa chinensis HOM05D006419 ORTHO05D008096 3.2e-37 159.8 92 81.5
TPR.G17971 Trifolium pratense HOM05D006419 ORTHO05D008096 3.2e-37 159.8 100 82.0
COL.COLO4_12638 Corchorus olitorius HOM05D006419 ORTHO05D008096 4.2e-37 159.5 98 80.6
TAR375G0946 Trochodendron aralioides HOM05D006419 ORTHO05D008096 4.2e-37 159.5 98 82.7
unitig_37.g12884 Utricularia gibba HOM05D006419 ORTHO05D008096 4.2e-37 159.5 91 83.5
CANSAT56G1223 Cannabis sativa HOM05D006419 ORTHO05D008096 5.4e-37 159.1 98 79.6
CAN.G170.61 Capsicum annuum HOM05D006419 ORTHO05D008096 5.4e-37 159.1 104 76.0
Ciclev10023026m.g Citrus clementina HOM05D006419 ORTHO05D008096 5.4e-37 159.1 98 79.6
PSO782G1455 Papaver somniferum HOM05D006419 ORTHO05D008096 9.2e-37 158.3 98 79.6
Psat4g151440 Pisum sativum HOM05D006419 ORTHO05D008096 9.2e-37 158.3 94 83.0
Thecc.01G370100 Theobroma cacao HOM05D006419 ORTHO05D008096 9.2e-37 158.3 98 76.5
Eucgr.E01325 Eucalyptus grandis HOM05D006419 ORTHO05D008096 1.2e-36 157.9 150 56.7
Glyma.07G080100 Glycine max HOM05D006419 ORTHO05D008096 1.2e-36 157.9 98 78.6
Gohir.D11G088500 Gossypium hirsutum HOM05D006419 ORTHO05D008096 1.2e-36 157.9 98 78.6
Gorai.007G094600 Gossypium raimondii HOM05D006419 ORTHO05D008096 1.2e-36 157.9 98 78.6
MD04G1046600 Malus domestica HOM05D006419 ORTHO05D008096 2.7e-36 156.8 98 80.6
Hund09553 Selenicereus undatus HOM05D006419 ORTHO05D008096 2.7e-36 156.8 103 75.7
BcaC01g05111 Brassica carinata HOM05D006419 ORTHO05D008096 3.5e-36 156.4 98 76.5
A03p25320 Brassica napus HOM05D006419 ORTHO05D008096 3.5e-36 156.4 98 76.5
C03p30210 Brassica napus HOM05D006419 ORTHO05D008096 3.5e-36 156.4 98 76.5
BolC3t15370H Brassica oleracea HOM05D006419 ORTHO05D008096 3.5e-36 156.4 98 76.5
BraA03t11736Z Brassica rapa HOM05D006419 ORTHO05D008096 3.5e-36 156.4 98 76.5
vmacro13347 Vaccinium macrocarpon HOM05D006419 ORTHO05D008096 4.6e-36 156.0 104 75.0
Gohir.A11G084400 Gossypium hirsutum HOM05D006419 ORTHO05D008096 6.0e-36 155.6 98 77.6
PGR042G1692 Punica granatum HOM05D006419 ORTHO05D008096 6.0e-36 155.6 92 79.3
Duzib133G0791 Durio zibethinus HOM05D006419 ORTHO05D008096 1.7e-35 154.1 98 76.5
CDE11G0029 Ceratophyllum demersum HOM05D006419 ORTHO05D008096 2.3e-35 153.7 143 55.9
Glyma.03G018600 Glycine max HOM05D006419 ORTHO05D008096 4.3e-34 149.4 98 76.5
arahy.Tifrunner.gnm1.ann1.PAP2UH Arachis hypogaea HOM05D006419 ORTHO05D008096 8.1e-33 145.2 89 80.9
Mapoly0004s0131 Marchantia polymorpha HOM05D006419 ORTHO05D008096 1.1e-32 144.8 98 71.4
ATR0757G048 Amborella trichopoda HOM05D006419 ORTHO05D008096 1.8e-32 144.1 92 70.7
SEGI_03184 Sequoiadendron giganteum HOM05D006419 ORTHO05D008096 3.4e-31 139.8 104 63.5
BcaB06g29431 Brassica carinata HOM05D006419 ORTHO05D008096 2.9e-30 136.7 85 76.5
HPP92_022119 Vanilla planifolia HOM05D006419 ORTHO05D008096 2.9e-30 136.7 92 70.7
AagrBONN_evm.TU.Sc2ySwM_228.3881 Anthoceros agrestis HOM05D006419 ORTHO05D008096 6.0e-28 129.0 99 62.6
Pp3c15_11080 Physcomitrium patens HOM05D006419 ORTHO05D008096 7.8e-28 128.6 98 64.3
Ah.15g094110 Amaranthus hybridus HOM05D006419 ORTHO05D008096 2.3e-27 127.1 92 71.7
Carub.0005s2776 Capsella rubella HOM05D006419 ORTHO05D008096 3.0e-27 126.7 67 91.0
FAN19G0283 Fragaria x ananassa HOM05D006419 ORTHO05D008096 3.0e-27 126.7 70 84.3
FAN28G0164 Fragaria x ananassa HOM05D006419 ORTHO05D008096 3.3e-26 123.2 65 84.6
Cre10.g426000 Chlamydomonas reinhardtii HOM05D006419 ORTHO05D008096 5.6e-26 122.5 92 57.6
FAN23G1662 Fragaria x ananassa HOM05D006419 ORTHO05D008096 1.6e-25 120.9 65 84.6
SMO367G0935 Selaginella moellendorffii HOM05D006419 ORTHO05D008096 1.6e-25 120.9 92 62.0
PSO782G2080 Papaver somniferum HOM05D006419 ORTHO05D008096 3.6e-25 119.8 65 84.6
PRCOL_00003278 Prasinoderma coloniale HOM05D006419 ORTHO05D008096 2.9e-22 110.2 99 56.6
A04p33960 Brassica napus HOM05D006419 ORTHO05D008096 3.8e-22 109.8 105 57.1
AL4G44870 Arabidopsis lyrata HOM05D006419 ORTHO05D008096 5.4e-21 105.9 71 77.5
FAN28G1401 Fragaria x ananassa HOM05D006419 ORTHO05D008096 5.4e-21 105.9 74 70.3
Haze_27740 Corylus avellana HOM05D006419 ORTHO05D008096 1.1e-16 91.7 93 49.5
CSS0035991 Camellia sinensis var. sinensis HOM05D006419 ORTHO05D008096 7.6e-15 85.5 53 77.4
BraA04t18857Z Brassica rapa HOM05D006419 ORTHO05D008096 2.1e-09 67.4 43 76.7
Zm00001eb320180 Zea mays HOM05D006419 ORTHO05D008096 8.2e-09 65.5 60 58.3
SHI13486 Sapria himalayana HOM05D006419 ORTHO05D008096 5.8e-07 59.3 39 66.7
Dinv28502 Davidia involucrata HOM05D000001 ORTHO05D000003 1.0e-06 58.5 44 61.4


User provided reference genes

Program Settings