Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold47G17717 Striga asiatica HOM05D004947 ORTHO05D006077 6.8e-81 303.9 150 100.0
SGA_v2.0_scaffold47G17714 Striga asiatica HOM05D004947 ORTHO05D006077 8.6e-52 207.2 131 82.4
Migut.L00078 Erythranthe guttata HOM05D004947 ORTHO05D006077 2.1e-37 159.5 132 61.4
SalBow5G3891 Salvia bowleyana HOM05D004947 ORTHO05D006077 4.3e-35 151.8 148 52.7
SalBow5G4162 Salvia bowleyana HOM05D004947 ORTHO05D006077 4.3e-35 151.8 148 52.7
CiPaw.03G134900 Carya illinoinensis HOM05D004947 ORTHO05D006077 2.1e-34 149.4 131 55.0
Oeu056486.1 Olea europaea HOM05D004947 ORTHO05D006077 3.1e-33 145.6 132 56.8
Dinv42703 Davidia involucrata HOM05D004947 ORTHO05D006077 5.3e-33 144.8 148 50.7
DCAR_014256 Daucus carota HOM05D004947 ORTHO05D006077 3.4e-32 142.1 134 52.2
unitig_88.g27735 Utricularia gibba HOM05D004947 ORTHO05D006077 3.4e-32 142.1 133 54.9
FAN23G3004 Fragaria x ananassa HOM05D004947 ORTHO05D006077 4.5e-32 141.7 130 54.6
Sc03g0004250 Simmondsia chinensis HOM05D004947 ORTHO05D006077 7.6e-32 141.0 132 54.5
AUR62003314 Chenopodium quinoa HOM05D004947 ORTHO05D006077 1.3e-31 140.2 130 55.4
Peaxi162Scf01006g00315 Petunia axillaris HOM05D004947 ORTHO05D006077 2.2e-31 139.4 150 52.0
Cfa002745 Carpinus fangiana HOM05D004947 ORTHO05D006077 2.9e-31 139.0 130 52.3
CiPaw.04G092600 Carya illinoinensis HOM05D004947 ORTHO05D006077 2.9e-31 139.0 148 48.6
PGR102G0173 Punica granatum HOM05D004947 ORTHO05D006077 3.8e-31 138.7 148 49.3
Nitab4.5_0000156g0160 Nicotiana tabacum HOM05D004947 ORTHO05D006077 4.9e-31 138.3 148 50.7
Prupe.6G175000 Prunus persica HOM05D004947 ORTHO05D006077 6.4e-31 137.9 133 50.4
Manes.12G141400 Manihot esculenta HOM05D004947 ORTHO05D006077 8.4e-31 137.5 129 51.9
Ah.02g124420 Amaranthus hybridus HOM05D004947 ORTHO05D006077 1.4e-30 136.7 130 53.8
Nitab4.5_0002843g0020 Nicotiana tabacum HOM05D004947 ORTHO05D006077 1.4e-30 136.7 148 51.4
PGSC0003DMG402012957 Solanum tuberosum HOM05D004947 ORTHO05D006077 3.2e-30 135.6 149 49.0
Solyc04g054170.4 Solanum lycopersicum HOM05D004947 ORTHO05D006077 4.2e-30 135.2 149 49.0
Lj4A878G34 Lonicera japonica HOM05D004947 ORTHO05D006077 5.5e-30 134.8 149 46.3
Manes.13G077600 Manihot esculenta HOM05D004947 ORTHO05D006077 7.1e-30 134.4 148 47.3
vmacro12909 Vaccinium macrocarpon HOM05D004947 ORTHO05D006077 7.1e-30 134.4 131 50.4
COL.COLO4_11020 Corchorus olitorius HOM05D004947 ORTHO05D006077 9.3e-30 134.0 148 48.0
HanXRQChr14g0446211 Helianthus annuus HOM05D004947 ORTHO05D006077 1.2e-29 133.7 130 48.5
Thecc.01G111600 Theobroma cacao HOM05D004947 ORTHO05D006077 1.2e-29 133.7 131 51.9
FvH4_1g24620 Fragaria vesca HOM05D004947 ORTHO05D006077 1.6e-29 133.3 130 50.8
FAN19G2885 Fragaria x ananassa HOM05D004947 ORTHO05D006077 1.6e-29 133.3 130 50.8
Sopen04g023630 Solanum pennellii HOM05D004947 ORTHO05D006077 1.6e-29 133.3 149 48.3
Cpa.g.sc196.3 Carica papaya HOM05D004947 ORTHO05D006077 2.7e-29 132.5 131 53.4
FAN26G0674 Fragaria x ananassa HOM05D004947 ORTHO05D006077 2.7e-29 132.5 130 50.0
HanXRQChr15g0471901 Helianthus annuus HOM05D004947 ORTHO05D006077 2.7e-29 132.5 148 47.3
Eucgr.H04830 Eucalyptus grandis HOM05D004947 ORTHO05D006077 6.0e-29 131.3 148 44.6
RcHm_v2.0_Chr2g0116221 Rosa chinensis HOM05D004947 ORTHO05D006077 6.0e-29 131.3 130 50.8
TAR625G0980 Trochodendron aralioides HOM05D004947 ORTHO05D006077 6.0e-29 131.3 128 51.6
Gohir.A02G134000 Gossypium hirsutum HOM05D004947 ORTHO05D006077 7.9e-29 131.0 131 47.3
Lsat_1_v5_gn_2_65461 Lactuca sativa HOM05D004947 ORTHO05D006077 1.0e-28 130.6 156 44.9
Lj1g0026570 Lotus japonicus HOM05D004947 ORTHO05D006077 1.0e-28 130.6 130 50.8
QL06p032353 Quercus lobata HOM05D004947 ORTHO05D006077 1.0e-28 130.6 131 49.6
CAN.G1854.1 Capsicum annuum HOM05D004947 ORTHO05D006077 1.3e-28 130.2 148 50.0
Gohir.D03G045400 Gossypium hirsutum HOM05D004947 ORTHO05D006077 1.3e-28 130.2 131 46.6
Gorai.003G046500 Gossypium raimondii HOM05D004947 ORTHO05D006077 1.8e-28 129.8 131 47.3
Duzib147G0355 Durio zibethinus HOM05D004947 ORTHO05D006077 2.3e-28 129.4 131 50.4
Hund19664 Selenicereus undatus HOM05D004947 ORTHO05D006077 3.0e-28 129.0 130 51.5
TAR376G0315 Trochodendron aralioides HOM05D004947 ORTHO05D006077 3.9e-28 128.6 127 48.0
Ciclev10025244m.g Citrus clementina HOM05D004947 ORTHO05D006077 8.7e-28 127.5 148 46.6
Sed0009808 Sechium edule HOM05D004947 ORTHO05D006077 8.7e-28 127.5 140 47.1
ClCG01G019270 Citrullus lanatus HOM05D004947 ORTHO05D006077 1.1e-27 127.1 132 49.2
EL10Ac6g14744 Beta vulgaris HOM05D004947 ORTHO05D006077 1.5e-27 126.7 131 49.6
Atru.chr4.372 Acer truncatum HOM05D004947 ORTHO05D006077 1.9e-27 126.3 149 44.3
Atru.chr4.373 Acer truncatum HOM05D004947 ORTHO05D006077 1.9e-27 126.3 149 44.3
Lalb_Chr11g0068011 Lupinus albus HOM05D004947 ORTHO05D006077 2.5e-27 125.9 134 47.8
Psat7g052040 Pisum sativum HOM05D004947 ORTHO05D006077 4.3e-27 125.2 132 48.5
Phvul.009G140300 Phaseolus vulgaris HOM05D004947 ORTHO05D006077 5.6e-27 124.8 130 49.2
SHI11672 Sapria himalayana HOM05D004947 ORTHO05D006077 7.4e-27 124.4 131 46.6
FAN28G2993 Fragaria x ananassa HOM05D004947 ORTHO05D006077 9.6e-27 124.0 131 48.9
Nn1g00054 Nelumbo nucifera HOM05D004947 ORTHO05D006077 9.6e-27 124.0 131 49.6
Nn1g05196 Nelumbo nucifera HOM05D004947 ORTHO05D006077 9.6e-27 124.0 131 49.6
Ca_17699_v3 Cicer arietinum L. HOM05D004947 ORTHO05D006077 1.3e-26 123.6 132 49.2
Potri.005G083600 Populus trichocarpa HOM05D004947 ORTHO05D006077 1.6e-26 123.2 133 47.4
Cc07_g16050 Coffea canephora HOM05D004947 ORTHO05D006077 2.1e-26 122.9 132 48.5
TWI74G1183 Tripterygium wilfordii HOM05D004947 ORTHO05D006077 2.1e-26 122.9 130 49.2
CsaV3_6G045960 Cucumis sativus L. HOM05D004947 ORTHO05D006077 2.8e-26 122.5 130 48.5
THA.LOC104818481 Tarenaya hassleriana HOM05D004947 ORTHO05D006077 2.8e-26 122.5 132 44.7
MBI03_g11138_MAGBIO Magnolia biondii HOM05D004947 ORTHO05D006077 3.7e-26 122.1 148 44.6
Rhsim10G0151500 Rhododendron simsii HOM05D004947 ORTHO05D006077 4.8e-26 121.7 130 47.7
MELO3C007803.2 Cucumis melo HOM05D004947 ORTHO05D006077 1.1e-25 120.6 130 46.9
Glyma.06G145800 Glycine max HOM05D004947 ORTHO05D006077 1.4e-25 120.2 148 44.6
Ca_16888_v3 Cicer arietinum L. HOM05D004947 ORTHO05D006077 2.4e-25 119.4 129 48.8
CANSAT01G0537 Cannabis sativa HOM05D004947 ORTHO05D006077 4.0e-25 118.6 149 40.3
TPR.G2194 Trifolium pratense HOM05D004947 ORTHO05D006077 5.3e-25 118.2 126 50.0
CDE05G2725 Ceratophyllum demersum HOM05D004947 ORTHO05D006077 1.5e-24 116.7 131 44.3
PSO541G1244 Papaver somniferum HOM05D004947 ORTHO05D006077 3.4e-24 115.5 132 44.7
arahy.Tifrunner.gnm1.ann1.V2ZAQJ Arachis hypogaea HOM05D004947 ORTHO05D006077 7.6e-24 114.4 132 46.2
arahy.Tifrunner.gnm1.ann1.XRAY4T Arachis hypogaea HOM05D004947 ORTHO05D006077 7.6e-24 114.4 132 46.2
MELO3C007802.2 Cucumis melo HOM05D004947 ORTHO05D006077 7.6e-24 114.4 129 47.3
ECA238G1011 Erigeron canadensis HOM05D004947 ORTHO05D006077 2.2e-23 112.8 141 43.3
Sabra07G0068900 Salix brachista HOM05D004947 ORTHO05D006077 2.2e-23 112.8 134 44.0
TWI53G2111 Tripterygium wilfordii HOM05D004947 ORTHO05D006077 2.9e-23 112.5 130 45.4
Psat5g067160 Pisum sativum HOM05D004947 ORTHO05D006077 6.5e-23 111.3 131 43.5
PSO675G5310 Papaver somniferum HOM05D004947 ORTHO05D006077 8.4e-23 110.9 130 43.8
Medtr3g094760 Medicago truncatula HOM05D004947 ORTHO05D006077 2.5e-22 109.4 128 43.8
Zm00001eb364640 Zea mays HOM05D004947 ORTHO05D006077 2.5e-22 109.4 131 42.7
MD01G1017700 Malus domestica HOM05D004947 ORTHO05D006077 5.5e-22 108.2 131 44.3
HPP92_005876 Vanilla planifolia HOM05D004947 ORTHO05D006077 5.5e-22 108.2 131 44.3
TPR.G6951 Trifolium pratense HOM05D004947 ORTHO05D006077 7.1e-22 107.8 129 42.6
VMungo1309G0633 Vigna mungo HOM05D004947 ORTHO05D006077 7.1e-22 107.8 114 49.1
ATR0171G039 Amborella trichopoda HOM05D004947 ORTHO05D006077 3.5e-21 105.5 127 48.0
Haze_25032 Corylus avellana HOM05D004947 ORTHO05D006077 2.3e-20 102.8 88 53.4
Actinidia16961 Actinidia chinensis HOM05D004947 ORTHO05D006077 3.9e-20 102.1 97 47.4
AT5G64930 Arabidopsis thaliana HOM05D004947 ORTHO05D006077 2.2e-18 96.3 131 38.2
Aqoxy5G01985_Aqoxy5G01986 Aquilegia oxysepala HOM05D004947 ORTHO05D006077 2.8e-18 95.9 129 37.2
BcaB02g09842 Brassica carinata HOM05D004947 ORTHO05D006077 2.8e-18 95.9 131 37.4
BcaB04g20000 Brassica carinata HOM05D004947 ORTHO05D006077 2.8e-18 95.9 132 40.9
Thhalv10003912m.g Eutrema salsugineum HOM05D004947 ORTHO05D006077 8.2e-18 94.4 130 37.7
A06p31700 Brassica napus HOM05D004947 ORTHO05D006077 1.8e-17 93.2 132 36.4
Aa31LG1G17040 Aethionema arabicum HOM05D004947 ORTHO05D006077 2.4e-17 92.8 131 38.2
BraA06t26105Z Brassica rapa HOM05D004947 ORTHO05D006077 3.1e-17 92.4 132 36.4
BcaC01g02724 Brassica carinata HOM05D004947 ORTHO05D006077 4.1e-17 92.0 132 35.6
C03p61260 Brassica napus HOM05D004947 ORTHO05D006077 4.1e-17 92.0 132 35.6
BolC3t18387H Brassica oleracea HOM05D004947 ORTHO05D006077 4.1e-17 92.0 132 35.6
CARHR293840 Cardamine hirsuta HOM05D004947 ORTHO05D006077 6.9e-17 91.3 126 39.7
Os02g0770100 Oryza sativa ssp. japonica HOM05D004947 ORTHO05D006077 1.5e-16 90.1 126 40.5
AL8G42430 Arabidopsis lyrata HOM05D004947 ORTHO05D006077 2.6e-16 89.4 130 35.4
Sp2g28010 Schrenkiella parvula HOM05D004947 ORTHO05D006077 2.6e-16 89.4 132 35.6
Carub.0008s2576 Capsella rubella HOM05D004947 ORTHO05D006077 2.5e-14 82.8 149 34.2
Pp3c21_530 Physcomitrium patens HOM05D004947 ORTHO05D006077 1.2e-13 80.5 122 39.3
CSS0006585 Camellia sinensis var. sinensis HOM05D004947 ORTHO05D006077 7.9e-13 77.8 81 44.4
CSS0047108 Camellia sinensis var. sinensis HOM05D004947 ORTHO05D006077 7.9e-13 77.8 81 44.4
AagrBONN_evm.TU.Sc2ySwM_228.3588 Anthoceros agrestis HOM05D004947 ORTHO05D006077 1.4e-12 77.0 126 39.7
Thhalv10019768m.g Eutrema salsugineum HOM05D004947 ORTHO05D006077 5.1e-12 75.1 123 34.1
Mapoly0002s0001 Marchantia polymorpha HOM05D004947 ORTHO05D006077 5.1e-12 75.1 85 44.7
Pp3c22_5670 Physcomitrium patens HOM05D004947 ORTHO05D006077 5.1e-12 75.1 122 36.1
Mapoly0107s0002 Marchantia polymorpha HOM05D004947 ORTHO05D006077 6.7e-12 74.7 93 41.9
Thhalv10005311m.g Eutrema salsugineum HOM05D004947 ORTHO05D006077 8.8e-12 74.3 123 33.3
SEGI_09258 Sequoiadendron giganteum HOM05D004947 ORTHO05D006077 4.3e-11 72.0 104 37.5
Mapoly0483s0001 Marchantia polymorpha HOM05D004947 ORTHO05D006077 1.7e-10 70.1 93 40.9
CBR_g49522 Chara braunii HOM05D000019 ORTHO05D000048 2.2e-10 69.7 99 38.4
CBR_g4593 Chara braunii HOM05D004947 ORTHO05D006077 8.2e-10 67.8 98 35.7
AUR62016269 Chenopodium quinoa HOM05D004947 ORTHO05D006077 1.1e-09 67.4 71 54.9


User provided reference genes

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