Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold45G17215 Striga asiatica HOM05D010621 ORTHO05D000126 2.0e-244 848.6 414 100.0
SGA_v2.0_scaffold129G34162 Striga asiatica HOM05D010621 ORTHO05D000126 6.1e-23 112.8 325 27.1
SGA_v2.0_scaffold73G24374 Striga asiatica HOM05D010621 ORTHO05D000126 1.4e-22 111.7 251 35.1
SGA_v2.0_scaffold79G25635 Striga asiatica HOM05D010621 ORTHO05D000126 1.4e-19 101.7 135 38.5
SGA_v2.0_scaffold151G36755 Striga asiatica HOM05D000003 ORTHO05D000004 2.3e-17 94.4 107 42.1
SGA_v2.0_scaffold118G32446 Striga asiatica HOM05D000003 ORTHO05D000004 3.8e-17 93.6 72 55.6
SGA_v2.0_scaffold332G48961 Striga asiatica HOM05D010621 ORTHO05D000126 8.6e-17 92.4 255 31.0
SGA_v2.0_scaffold283G46955 Striga asiatica HOM05D010621 ORTHO05D000126 2.8e-15 87.4 157 35.7
SGA_v2.0_scaffold321G48584 Striga asiatica HOM05D010621 ORTHO05D000126 4.0e-14 83.6 210 32.9
SGA_v2.0_scaffold234G43650 Striga asiatica HOM05D037634 ORTHO05D000126 1.5e-13 81.6 93 38.7
SGA_v2.0_scaffold42G16140 Striga asiatica HOM05D010621 ORTHO05D000004 4.4e-13 80.1 225 29.3
SGA_v2.0_scaffold14G06828 Striga asiatica HOM05D002039 ORTHO05D005834 6.4e-12 76.3 71 42.3
SGA_v2.0_scaffold11G05791 Striga asiatica HOM05D000563 ORTHO05D000536 8.3e-12 75.9 72 43.1
SGA_v2.0_scaffold72G24063 Striga asiatica HOM05D000047 ORTHO05D000044 1.2e-10 72.0 50 64.0
SGA_v2.0_scaffold17G08062 Striga asiatica HOM05D000003 ORTHO05D000006 1.6e-10 71.6 205 29.3
SGA_v2.0_scaffold43G16397 Striga asiatica HOM05D009140 ORTHO05D010215 4.6e-10 70.1 159 31.4
SGA_v2.0_scaffold232G43493 Striga asiatica HOM05D010621 ORTHO05D000126 7.8e-10 69.3 97 37.1
SGA_v2.0_scaffold10G05166 Striga asiatica HOM05D016874 ORTHO05D000126 3.0e-09 67.4 52 50.0
SGA_v2.0_scaffold15G07343 Striga asiatica HOM05D000003 ORTHO05D000126 3.0e-09 67.4 63 41.3
SGA_v2.0_scaffold23G10019 Striga asiatica HOM05D000003 ORTHO05D000004 3.0e-09 67.4 205 26.3
SGA_v2.0_scaffold56G20035 Striga asiatica HOM05D010621 ORTHO05D000126 3.0e-09 67.4 107 38.3
SGA_v2.0_scaffold124G33597 Striga asiatica HOM05D010621 ORTHO05D000004 5.0e-09 66.6 72 37.5
SGA_v2.0_scaffold141G35547 Striga asiatica HOM05D010621 ORTHO05D010215 5.0e-09 66.6 66 42.4
SGA_v2.0_scaffold259G45819 Striga asiatica HOM05D000003 ORTHO05D000004 5.0e-09 66.6 90 34.4
SGA_v2.0_scaffold19G08685 Striga asiatica HOM05D017992 ORTHO05D000126 8.6e-09 65.9 106 34.0
SGA_v2.0_scaffold225G43070 Striga asiatica HOM05D000003 ORTHO05D000004 1.5e-08 65.1 77 33.8
SGA_v2.0_scaffold67G22642 Striga asiatica HOM05D000407 ORTHO05D000004 1.5e-08 65.1 69 39.1
PGSC0003DMG400020793 Solanum tuberosum HOM05D000003 ORTHO05D000126 4.3e-08 63.5 86 36.0
SGA_v2.0_scaffold14G07069 Striga asiatica HOM05D000367 ORTHO05D002159 4.3e-08 63.5 173 30.6
SGA_v2.0_scaffold830G53648 Striga asiatica HOM05D023122 ORTHO05D010636 7.3e-08 62.8 70 34.3
Rhsim06G0043400 Rhododendron simsii HOM05D000003 ORTHO05D000006 9.5e-08 62.4 58 41.4
SGA_v2.0_scaffold3G01490 Striga asiatica HOM05D030754 ORTHO05D000004 1.2e-07 62.0 70 35.7
SGA_v2.0_scaffold7G03810 Striga asiatica HOM05D010621 ORTHO05D000126 1.2e-07 62.0 100 34.0
SGA_v2.0_scaffold10G05079 Striga asiatica HOM05D000003 ORTHO05D000004 1.6e-07 61.6 73 37.0
SGA_v2.0_scaffold26G11238 Striga asiatica HOM05D008147 ORTHO05D010215 2.1e-07 61.2 41 58.5
RhsimUnG0010100 Rhododendron simsii HOM05D000003 ORTHO05D000126 2.8e-07 60.8 65 41.5
SGA_v2.0_scaffold68G22947 Striga asiatica HOM05D025057 ORTHO05D000126 2.8e-07 60.8 153 29.4
Nitab4.5_0003032g0050 Nicotiana tabacum HOM05D000003 ORTHO05D000126 6.2e-07 59.7 59 40.7
Dinv11094 Davidia involucrata HOM05D000003 ORTHO05D000126 8.0e-07 59.3 49 46.9
TWI31G0369 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 8.0e-07 59.3 172 27.9
Rhsim01G0112200 Rhododendron simsii HOM05D000003 ORTHO05D000126 1.8e-06 58.2 52 46.2
PSO541G3671 Papaver somniferum HOM05D000003 ORTHO05D000126 2.3e-06 57.8 91 38.5
Nitab4.5_0004512g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000126 4.0e-06 57.0 59 39.0
SGA_v2.0_scaffold12G06017 Striga asiatica HOM05D009140 ORTHO05D010636 4.0e-06 57.0 73 38.4
SGA_v2.0_scaffold4G01975 Striga asiatica HOM05D010565 ORTHO05D011213 4.0e-06 57.0 48 52.1
CANSAT64G1604 Cannabis sativa HOM05D000003 ORTHO05D000126 5.2e-06 56.6 102 35.3
Dinv10075 Davidia involucrata HOM05D000003 ORTHO05D000126 6.8e-06 56.2 97 38.1
SGA_v2.0_scaffold244G44341 Striga asiatica HOM05D000003 ORTHO05D000004 6.8e-06 56.2 71 32.4
SGA_v2.0_scaffold9G04785 Striga asiatica HOM05D017409 ORTHO05D000126 6.8e-06 56.2 62 37.1
Lj4g0024219 Lotus japonicus HOM05D000003 ORTHO05D000126 8.9e-06 55.8 74 29.7
PSO063G5229 Papaver somniferum HOM05D003407 ORTHO05D001026 8.9e-06 55.8 71 33.8
PSO478G1811 Papaver somniferum HOM05D000003 ORTHO05D000004 8.9e-06 55.8 71 35.2
Rhsim11G0146500 Rhododendron simsii HOM05D000003 ORTHO05D000004 8.9e-06 55.8 79 29.1
SGA_v2.0_scaffold102G29891 Striga asiatica HOM05D003766 ORTHO05D004607 8.9e-06 55.8 94 35.1


User provided reference genes

Program Settings