Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold45G17131 Striga asiatica HOM05D004769 ORTHO05D005605 1.1e-156 557.0 366 100.0
SGA_v2.0_scaffold115G32089 Striga asiatica HOM05D004769 ORTHO05D005605 3.4e-134 482.3 366 85.5
Migut.H02243 Erythranthe guttata HOM05D004769 ORTHO05D005605 1.2e-131 473.8 404 73.8
Cc07_g12960 Coffea canephora HOM05D004769 ORTHO05D005605 1.5e-129 466.8 407 69.3
MSTRG.3686 Avicennia marina HOM05D004769 ORTHO05D005605 1.6e-128 463.4 424 67.2
Oeu029083.1 Olea europaea HOM05D004769 ORTHO05D005605 1.4e-127 460.3 473 67.7
Oeu032315.1 Olea europaea HOM05D004769 ORTHO05D005605 9.9e-126 454.1 460 66.1
unitig_748.g7024 Utricularia gibba HOM05D004769 ORTHO05D005605 1.9e-124 449.9 236 92.8
Lsat_1_v5_gn_8_18601 Lactuca sativa HOM05D004769 ORTHO05D005605 1.2e-123 447.2 386 72.5
Actinidia35715 Actinidia chinensis HOM05D004769 ORTHO05D005605 2.8e-120 436.0 410 64.9
Dinv19070 Davidia involucrata HOM05D004769 ORTHO05D005605 2.4e-119 433.0 422 63.3
Ca_05772_v3 Cicer arietinum L. HOM05D004769 ORTHO05D005605 9.0e-119 431.0 374 66.0
Hma1.2p1_0034F.1_g021310 Hydrangea macrophylla HOM05D004769 ORTHO05D005605 3.4e-118 429.1 257 81.3
Hma1.2p1_0158F.1_g069800 Hydrangea macrophylla HOM05D004769 ORTHO05D005605 4.5e-118 428.7 398 63.6
CSS0001926 Camellia sinensis var. sinensis HOM05D004769 ORTHO05D005605 1.3e-117 427.2 259 80.3
TAR375G0174 Trochodendron aralioides HOM05D004769 ORTHO05D005605 1.1e-116 424.1 398 64.1
Rhsim10G0183300 Rhododendron simsii HOM05D004769 ORTHO05D005605 3.2e-116 422.5 388 74.5
Lj4A255T24 Lonicera japonica HOM05D004769 ORTHO05D005605 5.5e-116 421.8 397 65.2
Sc11g0004750 Simmondsia chinensis HOM05D004769 ORTHO05D005605 5.5e-116 421.8 421 66.5
ECA233G3826 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.1e-116 421.4 381 67.7
GSVIVG01026312001 Vitis vinifera HOM05D004769 ORTHO05D005605 9.3e-116 421.0 383 71.3
Migut.K01113 Erythranthe guttata HOM05D004769 ORTHO05D005605 1.2e-115 420.6 238 85.3
Peaxi162Scf00442g00627 Petunia axillaris HOM05D004769 ORTHO05D005605 1.2e-115 420.6 427 65.3
Atru.chr1.1954 Acer truncatum HOM05D004769 ORTHO05D005605 1.6e-115 420.2 418 65.8
HanXRQChr08g0218471 Helianthus annuus HOM05D004769 ORTHO05D005605 3.5e-115 419.1 394 69.0
Medtr5g077180 Medicago truncatula HOM05D004769 ORTHO05D005605 3.5e-115 419.1 431 63.6
Lj2C513G15 Lonicera japonica HOM05D004769 ORTHO05D005605 4.6e-115 418.7 358 61.5
Lalb_Chr17g0345901 Lupinus albus HOM05D004769 ORTHO05D005605 1.8e-114 416.8 439 62.6
Cfa007768 Carpinus fangiana HOM05D004769 ORTHO05D005605 2.3e-114 416.4 441 63.7
Nitab4.5_0000574g0160 Nicotiana tabacum HOM05D004769 ORTHO05D005605 2.3e-114 416.4 259 80.3
PSO017G5633 Papaver somniferum HOM05D004769 ORTHO05D005605 2.3e-114 416.4 225 88.9
Sopen04g006720 Solanum pennellii HOM05D004769 ORTHO05D005605 2.3e-114 416.4 435 63.2
vmacro20487 Vaccinium macrocarpon HOM05D004769 ORTHO05D005605 2.3e-114 416.4 390 77.2
TPR.G9995 Trifolium pratense HOM05D004769 ORTHO05D005605 3.9e-114 415.6 225 88.0
Haze_14305 Corylus avellana HOM05D004769 ORTHO05D005605 6.7e-114 414.8 437 59.7
Prupe.1G069400 Prunus persica HOM05D004769 ORTHO05D005605 6.7e-114 414.8 432 60.2
PGSC0003DMG400023617 Solanum tuberosum HOM05D004769 ORTHO05D005605 6.7e-114 414.8 431 63.3
Lalb_Chr04g0251441 Lupinus albus HOM05D004769 ORTHO05D005605 1.9e-113 413.3 226 85.8
Phvul.008G239200 Phaseolus vulgaris HOM05D004769 ORTHO05D005605 1.9e-113 413.3 435 65.1
TWI74G1557 Tripterygium wilfordii HOM05D004769 ORTHO05D005605 1.9e-113 413.3 258 80.2
Solyc04g014560.4 Solanum lycopersicum HOM05D004769 ORTHO05D005605 2.5e-113 412.9 445 61.8
CAN.G525.4 Capsicum annuum HOM05D004769 ORTHO05D005605 4.3e-113 412.1 259 79.9
CiPaw.03G077600 Carya illinoinensis HOM05D004769 ORTHO05D005605 5.6e-113 411.8 445 67.9
CsaV3_5G020660 Cucumis sativus L. HOM05D004769 ORTHO05D005605 5.6e-113 411.8 225 87.6
COL.COLO4_05842 Corchorus olitorius HOM05D004769 ORTHO05D005605 7.4e-113 411.4 367 65.4
MELO3C025080.2 Cucumis melo HOM05D004769 ORTHO05D005605 7.4e-113 411.4 238 84.5
PGR042G1215 Punica granatum HOM05D004769 ORTHO05D005605 9.6e-113 411.0 427 68.9
THA.LOC104823824 Tarenaya hassleriana HOM05D004769 ORTHO05D005605 1.3e-112 410.6 410 67.1
TWI77G0470 Tripterygium wilfordii HOM05D004769 ORTHO05D005605 2.1e-112 409.8 258 78.7
CANSAT78G2338 Cannabis sativa HOM05D004769 ORTHO05D005605 2.8e-112 409.5 440 60.2
Glyma.14G211600 Glycine max HOM05D004769 ORTHO05D005605 2.8e-112 409.5 442 64.9
MBI04_g35346_MAGBIO Magnolia biondii HOM05D004769 ORTHO05D005605 4.8e-112 408.7 428 64.7
EL10Ac6g13916 Beta vulgaris HOM05D004769 ORTHO05D005605 6.2e-112 408.3 456 62.1
ClCG01G008650 Citrullus lanatus HOM05D004769 ORTHO05D005605 8.1e-112 407.9 238 83.6
AUR62017457 Chenopodium quinoa HOM05D004769 ORTHO05D005605 1.8e-111 406.8 368 67.7
Sp7g05100 Schrenkiella parvula HOM05D004769 ORTHO05D005605 2.4e-111 406.4 376 64.9
Aqoxy5G00268 Aquilegia oxysepala HOM05D004769 ORTHO05D005605 4.0e-111 405.6 225 86.7
VMungo0647G0921 Vigna mungo HOM05D004769 ORTHO05D005605 5.3e-111 405.2 256 77.7
ATR0083G043 Amborella trichopoda HOM05D004769 ORTHO05D005605 9.0e-111 404.4 232 84.5
Thecc.04G060900 Theobroma cacao HOM05D004769 ORTHO05D005605 1.2e-110 404.1 259 77.6
Cpa.g.sc178.7 Carica papaya HOM05D004769 ORTHO05D005605 2.0e-110 403.3 225 84.9
AL7G46000 Arabidopsis lyrata HOM05D004769 ORTHO05D005605 2.6e-110 402.9 398 70.6
Potri.004G075700 Populus trichocarpa HOM05D004769 ORTHO05D005605 2.6e-110 402.9 427 58.8
RcHm_v2.0_Chr4g0398571 Rosa chinensis HOM05D004769 ORTHO05D005605 5.8e-110 401.7 418 60.5
TAR374G1377 Trochodendron aralioides HOM05D004769 ORTHO05D005605 5.8e-110 401.7 225 85.8
FvH4_4g06670 Fragaria vesca HOM05D004769 ORTHO05D005605 1.3e-109 400.6 418 61.0
Gohir.A08G052900 Gossypium hirsutum HOM05D004769 ORTHO05D005605 1.3e-109 400.6 225 85.8
Gohir.D08G062500 Gossypium hirsutum HOM05D004769 ORTHO05D005605 1.3e-109 400.6 225 85.8
Gorai.004G064700 Gossypium raimondii HOM05D004769 ORTHO05D005605 1.3e-109 400.6 225 85.8
Os05g0178900 Oryza sativa ssp. japonica HOM05D004769 ORTHO05D005605 1.3e-109 400.6 249 78.7
BolC4t25993H Brassica oleracea HOM05D004769 ORTHO05D005605 1.7e-109 400.2 390 67.2
FAN07G0829 Fragaria x ananassa HOM05D004769 ORTHO05D005605 2.9e-109 399.4 255 77.3
FAN17G2568 Fragaria x ananassa HOM05D004769 ORTHO05D005605 3.8e-109 399.1 225 84.4
C04p44180 Brassica napus HOM05D004769 ORTHO05D005605 8.4e-109 397.9 390 67.2
AUR62032521 Chenopodium quinoa HOM05D004769 ORTHO05D005605 1.1e-108 397.5 347 61.4
SHI30114 Sapria himalayana HOM05D002544 ORTHO05D007856 1.1e-108 397.5 225 84.0
DCAR_028435 Daucus carota HOM05D004769 ORTHO05D005605 1.4e-108 397.1 252 77.4
FAN22G0974 Fragaria x ananassa HOM05D004769 ORTHO05D005605 1.4e-108 397.1 225 84.0
Sed0006929 Sechium edule HOM05D004769 ORTHO05D005605 1.4e-108 397.1 259 76.4
A04p10540 Brassica napus HOM05D004769 ORTHO05D005605 1.9e-108 396.7 386 71.2
Potri.017G144121 Populus trichocarpa HOM05D004769 ORTHO05D005605 1.9e-108 396.7 432 60.0
HPP92_017811 Vanilla planifolia HOM05D004769 ORTHO05D005605 2.5e-108 396.4 401 64.6
arahy.Tifrunner.gnm1.ann1.SAK0JK Arachis hypogaea HOM05D004769 ORTHO05D005605 3.2e-108 396.0 246 79.7
FAN12G3741 Fragaria x ananassa HOM05D004769 ORTHO05D005605 4.2e-108 395.6 253 77.1
Thhalv10027788m.g Eutrema salsugineum HOM05D004769 ORTHO05D005605 7.1e-108 394.8 407 67.3
BraA04t16720Z Brassica rapa HOM05D004769 ORTHO05D005605 2.1e-107 393.3 390 69.7
Zm00001eb377290 Zea mays HOM05D004769 ORTHO05D005605 2.1e-107 393.3 392 58.2
Glyma.02G241900 Glycine max HOM05D004769 ORTHO05D005605 2.7e-107 392.9 475 56.6
Carub.0007s3249 Capsella rubella HOM05D004769 ORTHO05D005605 6.0e-107 391.7 226 83.2
MD13G1237000 Malus domestica HOM05D004769 ORTHO05D005605 7.9e-107 391.3 413 59.1
MD16G1242400 Malus domestica HOM05D004769 ORTHO05D005605 3.9e-106 389.0 407 61.7
Sabra04G0050400 Salix brachista HOM05D004769 ORTHO05D005605 1.9e-105 386.7 438 56.2
Ah.02g128700 Amaranthus hybridus HOM05D004769 ORTHO05D005605 1.8e-103 380.2 326 62.9
BcaC02g09560 Brassica carinata HOM05D004769 ORTHO05D005605 2.4e-103 379.8 390 65.6
Nn1g02020 Nelumbo nucifera HOM05D004769 ORTHO05D005605 1.0e-101 374.4 234 78.6
QL02p060102 Quercus lobata HOM05D004769 ORTHO05D005605 2.2e-101 373.2 343 60.1
MapolyY_B0025 Marchantia polymorpha HOM05D004769 ORTHO05D005605 1.9e-100 370.2 232 76.7
LjContig00141g0012428 Lotus japonicus HOM05D004769 ORTHO05D005605 7.9e-99 364.8 412 55.3
Mapoly0017s0020 Marchantia polymorpha HOM05D004769 ORTHO05D005605 2.3e-98 363.2 232 75.4
CBR_g22246 Chara braunii HOM05D004769 ORTHO05D005605 1.5e-97 360.5 246 74.0
Pp3c14_14980 Physcomitrium patens HOM05D004769 ORTHO05D005605 7.4e-97 358.2 225 74.2
Pp3c14_14989 Physcomitrium patens HOM05D004769 ORTHO05D005605 7.4e-97 358.2 225 74.2
SMO351G0501 Selaginella moellendorffii HOM05D004769 ORTHO05D005605 8.2e-96 354.8 225 75.6
CARHR215720 Cardamine hirsuta HOM05D004769 ORTHO05D005605 3.9e-90 335.9 352 66.2
PSO170G3102 Papaver somniferum HOM05D004769 ORTHO05D005605 1.7e-88 330.5 172 91.9
Eucgr.J01630 Eucalyptus grandis HOM05D004769 ORTHO05D005605 2.2e-88 330.1 205 82.0
CDE02G3274 Ceratophyllum demersum HOM05D004769 ORTHO05D005605 7.7e-78 295.0 154 87.0
Pp3c17_5870 Physcomitrium patens HOM05D004769 ORTHO05D005605 3.6e-75 286.2 172 78.5
Lalb_Chr10g0104091 Lupinus albus HOM05D004769 ORTHO05D005605 5.2e-74 282.3 148 85.8
Dinv28230 Davidia involucrata HOM05D004769 ORTHO05D005605 7.7e-70 268.5 311 59.2
CDE02G0598 Ceratophyllum demersum HOM05D004769 ORTHO05D005605 3.4e-65 253.1 136 83.8
Cre03.g178300 Chlamydomonas reinhardtii HOM05D004769 ORTHO05D005605 2.7e-62 243.4 225 56.0
Sed0026946 Sechium edule HOM05D004769 ORTHO05D005605 3.2e-60 236.5 143 81.8
PRCOL_00000163 Prasinoderma coloniale HOM05D004769 ORTHO05D005605 2.1e-59 233.8 204 55.9
SEGI_40758 Sequoiadendron giganteum HOM05D004769 ORTHO05D005605 4.7e-59 232.6 143 79.7
Ciclev10018227m.g Citrus clementina HOM05D004769 ORTHO05D005605 6.1e-59 232.3 146 76.7
MCO07G113 Micromonas commoda HOM05D004769 ORTHO05D005605 6.1e-59 232.3 228 50.4
Nitab4.5_0005193g0040 Nicotiana tabacum HOM05D004769 ORTHO05D005605 1.4e-58 231.1 162 72.2
Oeu048972.1 Olea europaea HOM05D004769 ORTHO05D005605 8.8e-58 228.4 114 94.7
CDE02G1258 Ceratophyllum demersum HOM05D004769 ORTHO05D005605 1.2e-54 218.0 266 62.0
Lj1g0013060 Lotus japonicus HOM05D004769 ORTHO05D005605 1.2e-54 218.0 174 64.9
Zm00001eb283000 Zea mays HOM05D004769 ORTHO05D005605 2.0e-46 190.7 139 71.2
CSS0045560 Camellia sinensis var. sinensis HOM05D004769 ORTHO05D005605 4.6e-46 189.5 96 86.5
Ciclev10015797m.g Citrus clementina HOM05D004769 ORTHO05D005605 2.5e-44 183.7 340 46.2
Duzib211G0206 Durio zibethinus HOM05D004769 ORTHO05D005605 5.6e-44 182.6 137 71.5
Sed0001997 Sechium edule HOM05D004769 ORTHO05D005605 8.0e-43 178.7 101 81.2
SMO231G0026 Selaginella moellendorffii HOM05D004769 ORTHO05D005605 1.2e-41 174.9 191 55.5
Aa31LG9G17630 Aethionema arabicum HOM05D004769 ORTHO05D005605 4.9e-40 169.5 98 81.6
AT5G37370 Arabidopsis thaliana HOM05D004769 ORTHO05D005605 2.4e-39 167.2 263 63.1
Gohir.A02G124601 Gossypium hirsutum HOM05D004769 ORTHO05D005605 5.4e-39 166.0 96 81.2
Zm00001eb361740 Zea mays HOM05D004769 ORTHO05D005605 4.6e-38 162.9 96 81.2
SMO231G0020 Selaginella moellendorffii HOM05D004769 ORTHO05D005605 2.5e-36 157.1 130 56.9
Manes.02G080000 Manihot esculenta HOM05D004769 ORTHO05D005605 6.2e-35 152.5 91 85.7
Zm00001eb046660 Zea mays HOM05D004769 ORTHO05D005605 1.4e-34 151.4 84 81.0
Zm00001eb221230 Zea mays HOM05D004769 ORTHO05D005605 1.2e-33 148.3 83 80.7
Psat2g044720 Pisum sativum HOM05D004769 ORTHO05D005605 7.5e-33 145.6 293 56.0
HanXRQChr14g0429111 Helianthus annuus HOM05D004769 ORTHO05D005605 1.2e-30 138.3 80 82.5
Gohir.A11G193800 Gossypium hirsutum HOM05D004769 ORTHO05D005605 2.7e-30 137.1 85 77.6
Lalb_Chr10g0104101 Lupinus albus HOM05D004769 ORTHO05D005605 3.5e-30 136.7 112 66.1
HanXRQChr14g0429051 Helianthus annuus HOM05D004769 ORTHO05D005605 5.1e-29 132.9 80 80.0
MD01G1153700 Malus domestica HOM05D004769 ORTHO05D005605 1.2e-27 128.3 79 77.2
CSS0036345 Camellia sinensis var. sinensis HOM05D004769 ORTHO05D005605 3.6e-27 126.7 256 59.0
ATR0127G005 Amborella trichopoda HOM05D004769 ORTHO05D005605 1.9e-23 114.4 77 75.3
Lj2g0009880 Lotus japonicus HOM05D004769 ORTHO05D005605 5.4e-23 112.8 74 68.9
Lj1g0013083 Lotus japonicus HOM05D004769 ORTHO05D005605 2.3e-21 107.5 68 69.1
Gohir.A08G086562 Gossypium hirsutum HOM05D004769 ORTHO05D005605 3.0e-21 107.1 83 66.3
CDE02G3573 Ceratophyllum demersum HOM05D004769 ORTHO05D005605 4.3e-20 103.2 195 52.3
HanXRQChr08g0224021 Helianthus annuus HOM05D004769 ORTHO05D005605 2.6e-17 94.0 60 76.7
FAN05G2233 Fragaria x ananassa HOM05D004769 ORTHO05D005605 9.3e-15 85.5 236 48.3
Actinidia28787 Actinidia chinensis HOM05D004769 ORTHO05D005605 3.5e-14 83.6 273 44.0
FAN07G1815 Fragaria x ananassa HOM05D004769 ORTHO05D005605 3.5e-14 83.6 229 45.9
SMO351G0097 Selaginella moellendorffii HOM05D007698 ORTHO05D009663 3.5e-14 83.6 61 63.9
Zm00001eb313200 Zea mays HOM05D004769 ORTHO05D005605 1.1e-12 78.6 43 86.0
AagrBONN_evm.TU.Sc2ySwM_344.2680 Anthoceros agrestis HOM05D004769 ORTHO05D005605 9.0e-10 68.9 49 75.5
FAN23G0276 Fragaria x ananassa HOM05D004769 ORTHO05D005605 3.5e-06 57.0 50 58.0


User provided reference genes

Program Settings