Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold45G17070 Striga asiatica HOM05D000951 ORTHO05D401973 1.0e-57 226.5 110 100.0
Migut.J01170 Erythranthe guttata HOM05D000951 ORTHO05D001597 8.7e-09 63.9 30 96.7
Hma1.2p1_0665F.1_g199140 Hydrangea macrophylla HOM05D000951 ORTHO05D001597 2.5e-08 62.4 30 90.0
DCAR_009200 Daucus carota HOM05D000951 ORTHO05D001597 3.3e-08 62.0 30 93.3
Os01g0174300 Oryza sativa ssp. japonica HOM05D000951 ORTHO05D001597 1.3e-07 60.1 30 90.0
TAR625G0129 Trochodendron aralioides HOM05D000951 ORTHO05D001597 1.6e-07 59.7 30 86.7
Eucgr.C01134 Eucalyptus grandis HOM05D000951 ORTHO05D001597 2.1e-07 59.3 30 90.0
SGA_v2.0_scaffold229G43326 Striga asiatica HOM05D000951 ORTHO05D001597 2.8e-07 58.9 30 86.7
Haze_25612 Corylus avellana HOM05D002931 ORTHO05D001597 3.6e-07 58.5 30 86.7
Dinv36545 Davidia involucrata HOM05D000951 ORTHO05D001597 3.6e-07 58.5 30 86.7
Lsat_1_v5_gn_8_58900 Lactuca sativa HOM05D004174 ORTHO05D004624 3.6e-07 58.5 30 83.3
MD02G1035100 Malus domestica HOM05D000951 ORTHO05D001597 3.6e-07 58.5 30 86.7
Rhsim01G0076500 Rhododendron simsii HOM05D000951 ORTHO05D001597 3.6e-07 58.5 30 86.7
Sc18g0000690 Simmondsia chinensis HOM05D000951 ORTHO05D001597 3.6e-07 58.5 30 83.3
vmacro20598 Vaccinium macrocarpon HOM05D000951 ORTHO05D001597 3.6e-07 58.5 30 83.3
MSTRG.19606 Avicennia marina HOM05D000951 ORTHO05D001597 6.2e-07 57.8 30 90.0
Potri.006G218600 Populus trichocarpa HOM05D000951 ORTHO05D001597 8.1e-07 57.4 30 83.3
Hund09143 Selenicereus undatus HOM05D000951 ORTHO05D001597 8.1e-07 57.4 30 83.3
Nn8g39389 Nelumbo nucifera HOM05D000951 ORTHO05D001597 1.1e-06 57.0 30 83.3
PSO170G4324 Papaver somniferum HOM05D000951 ORTHO05D001597 1.1e-06 57.0 30 83.3
PSO455G0024 Papaver somniferum HOM05D000951 ORTHO05D001597 1.1e-06 57.0 30 83.3
Prupe.7G239800 Prunus persica HOM05D000951 ORTHO05D001597 1.1e-06 57.0 30 86.7
GSVIVG01015504001 Vitis vinifera HOM05D000951 ORTHO05D001597 1.1e-06 57.0 30 86.7
ATR1156G037 Amborella trichopoda HOM05D000951 ORTHO05D001597 1.4e-06 56.6 30 80.0
Duzib150G0417 Durio zibethinus HOM05D000951 ORTHO05D001597 1.4e-06 56.6 30 86.7
Gohir.A06G057300 Gossypium hirsutum HOM05D000951 ORTHO05D001597 1.4e-06 56.6 30 86.7
Thecc.09G123300 Theobroma cacao HOM05D000951 ORTHO05D001597 1.4e-06 56.6 30 86.7
Cc06_g08770 Coffea canephora HOM05D000951 ORTHO05D001597 2.4e-06 55.8 30 83.3
MD00G1107200 Malus domestica HOM05D000951 ORTHO05D001597 2.4e-06 55.8 30 83.3
QL02p087833 Quercus lobata HOM05D000951 ORTHO05D001597 2.4e-06 55.8 30 83.3
CSS0016952 Camellia sinensis var. sinensis HOM05D000951 ORTHO05D001597 3.1e-06 55.5 30 80.0
CSS0049606 Camellia sinensis var. sinensis HOM05D000951 ORTHO05D001597 3.1e-06 55.5 30 80.0
CiPaw.03G242000 Carya illinoinensis HOM05D000951 ORTHO05D001597 3.1e-06 55.5 30 80.0
PGR102G2134 Punica granatum HOM05D000951 ORTHO05D001597 3.1e-06 55.5 30 80.0
HPP92_005148 Vanilla planifolia HOM05D000951 ORTHO05D001597 3.1e-06 55.5 30 80.0
Aqoxy7G02098 Aquilegia oxysepala HOM05D000951 ORTHO05D001597 4.0e-06 55.1 30 80.0
Lsat_1_v5_gn_5_97060 Lactuca sativa HOM05D000951 ORTHO05D001597 5.3e-06 54.7 33 75.8
Manes.06G049900 Manihot esculenta HOM05D000951 ORTHO05D001597 5.3e-06 54.7 30 83.3
Oeu058057.2 Olea europaea HOM05D000951 ORTHO05D001597 5.3e-06 54.7 30 80.0
Oeu058063.1 Olea europaea HOM05D000951 ORTHO05D001597 5.3e-06 54.7 31 77.4
PSO455G0205 Papaver somniferum HOM05D000951 ORTHO05D001597 5.3e-06 54.7 30 76.7
Sabra06G0168500 Salix brachista HOM05D000951 ORTHO05D001597 5.3e-06 54.7 30 80.0
DCAR_000386 Daucus carota HOM05D000951 ORTHO05D001597 6.9e-06 54.3 30 80.0
Gohir.D06G055600 Gossypium hirsutum HOM05D000951 ORTHO05D001597 9.0e-06 53.9 30 83.3
Gorai.010G064900 Gossypium raimondii HOM05D000951 ORTHO05D001597 9.0e-06 53.9 30 83.3


User provided reference genes

Program Settings