Notice (8): Undefined variable: source_groups_information [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000951', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '631', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A02p04440' => 'bna', 'A02p21820' => 'bna', 'A02p21830' => 'bna', 'A03p08480' => 'bna', 'A07p15250' => 'bna', 'A07p27850' => 'bna', 'A07p43060' => 'bna', 'A10p21680' => 'bna', 'Aa31LG11G11810' => 'aar', 'Aa31LG4G7870' => 'aar', 'Aa31LG6G8050' => 'aar', 'Aa31LG6G9110' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.2307' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3621' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5248' => 'aag', 'Actinidia02592' => 'ach', 'Actinidia18376' => 'ach', 'Actinidia22002' => 'ach', 'Actinidia37832' => 'ach', 'Ah.05g172520' => 'amhyb', 'Ah.05g172530' => 'amhyb', 'Ah.06g191190' => 'amhyb', 'Ah.12g061950' => 'amhyb', 'Ah.15g099310' => 'amhyb', 'Ah.16g110180' => 'amhyb', 'AL1G51170' => 'aly', 'AL2G37990' => 'aly', 'AL6G28860' => 'aly', 'AL6G31630' => 'aly', 'Aqoxy1G00099' => 'aox', 'Aqoxy1G04088' => 'aox', 'Aqoxy6G00153' => 'aox', 'Aqoxy7G02098' => 'aox', 'Aqoxy7G02149' => 'aox', 'arahy.Tifrunner.gnm1.ann1.34G2NL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L21K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B1DGRD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B2KMHD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FIU44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9J1TW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y57IDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YZT8QC' => 'arhy', 'AT1G37130' => 'ath', 'AT1G77760' => 'ath', 'AT5G17770' => 'ath', 'AT5G20080' => 'ath', 'ATR0068G079' => 'atr', 'ATR0684G206' => 'atr', 'ATR1156G037' => 'atr', 'Atru.chr13.1323' => 'acertr', 'Atru.chr13.1367' => 'acertr', 'Atru.chr2.1564' => 'acertr', 'Atru.chr3.2915' => 'acertr', 'Atru.chr7.1199' => 'acertr', 'Atru.chr8.893' => 'acertr', 'Atru.chr8.894' => 'acertr', 'AUR62001601' => 'cqu', 'AUR62004699' => 'cqu', 'AUR62011088' => 'cqu', 'AUR62011089' => 'cqu', 'AUR62011110' => 'cqu', 'AUR62011111' => 'cqu', 'AUR62020178' => 'cqu', 'AUR62023616' => 'cqu', 'AUR62033478' => 'cqu', 'AUR62036515' => 'cqu', 'AUR62037059' => 'cqu', 'BcaB01g04810' => 'bca', 'BcaB01g04911' => 'bca', 'BcaB01g05154' => 'bca', 'BcaB02g07129' => 'bca', 'BcaB03g15925' => 'bca', 'BcaB05g23276' => 'bca', 'BcaB05g25075' => 'bca', 'BcaB08g36746' => 'bca', 'BcaC03g13542' => 'bca', 'BcaC03g15090' => 'bca', 'BcaC03g15770' => 'bca', 'BcaC08g45455' => 'bca', 'BolC2t06841H' => 'bol', 'BolC2t07884H' => 'bol', 'BolC2t08722H' => 'bol', 'BolC2t09525H' => 'bol', 'BolC3t13476H' => 'bol', 'BolC6t35954H' => 'bol', 'BolC6t38246H' => 'bol', 'BolC6t40193H' => 'bol', 'BraA02t05408Z' => 'bra', 'BraA02t07185Z' => 'bra', 'BraA03t10171Z' => 'bra', 'BraA07t30424Z' => 'bra', 'BraA07t31827Z' => 'bra', 'C02p09340' => 'bna', 'C02p26490' => 'bna', 'C02p35110' => 'bna', 'C03p09880' => 'bna', 'C06p30820' => 'bna', 'C06p51710' => 'bna', 'C09p66260' => 'bna', 'CAN.G128.141' => 'can', 'CAN.G372.2' => 'can', 'CAN.G44.5' => 'can', 'CAN.G935.7' => 'can', 'CANSAT11G2446' => 'cansat', 'CANSAT25G1717' => 'cansat', 'CANSAT78G1357' => 'cansat', 'CARHR034720' => 'chi', 'CARHR071270' => 'chi', 'CARHR192750' => 'chi', 'CARHR195400' => 'chi', 'Carub.0001s3407' => 'cru', 'Carub.0002s2466' => 'cru', 'Carub.0006s1600' => 'cru', 'Carub.0006s1846' => 'cru', 'Ca_03444_v3' => 'car', 'Ca_12170_v3' => 'car', 'Ca_12848_v3' => 'car', 'Ca_15220_v3' => 'car', 'Ca_16254_v3' => 'car', 'Ca_21695_v3' => 'car', 'CBR_g36815' => 'cbr', 'CBR_g36817' => 'cbr', 'CBR_g4013' => 'cbr', 'CBR_g45637' => 'cbr', 'CBR_g46196' => 'cbr', 'CBR_g46198' => 'cbr', 'CBR_g46200' => 'cbr', 'CBR_g46898' => 'cbr', 'Cc00_g12040' => 'ccan', 'Cc06_g08770' => 'ccan', 'Cc06_g21550' => 'ccan', 'Cc10_g14390' => 'ccan', 'CDE02G2349' => 'cde', 'CDE04G2035' => 'cde', 'CDE06G0176' => 'cde', 'CDE06G2658' => 'cde', 'Cfa010247' => 'cfa', 'Cfa010454' => 'cfa', 'Cfa015964' => 'cfa', 'Cfa019869' => 'cfa', 'Cfa022855' => 'cfa', 'Cfa025215' => 'cfa', 'Cfa026789' => 'cfa', 'Cfa026899' => 'cfa', 'Cfa027359' => 'cfa', 'Ciclev10000220m.g' => 'ccl', 'Ciclev10008900m.g' => 'ccl', 'Ciclev10018119m.g' => 'ccl', 'Ciclev10018210m.g' => 'ccl', 'Ciclev10032349m.g' => 'ccl', 'CiPaw.03G242000' => 'cil', 'CiPaw.05G228100' => 'cil', 'CiPaw.06G025400' => 'cil', 'CiPaw.09G165700' => 'cil', 'CiPaw.13G047000' => 'cil', 'CiPaw.13G127400' => 'cil', 'ClCG02G024270' => 'cla', 'ClCG03G009280' => 'cla', 'ClCG03G009290' => 'cla', 'ClCG04G005060' => 'cla', 'ClCG10G016650' => 'cla', 'ClCG11G002910' => 'cla', 'ClCG11G015520' => 'cla', 'COL.COLO4_05763' => 'col', 'COL.COLO4_06727' => 'col', 'COL.COLO4_25291' => 'col', 'COL.COLO4_32799' => 'col', 'Cpa.g.c35493' => 'cpa', 'Cpa.g.sc49.137' => 'cpa', 'Cpa.g.sc73.10' => 'cpa', 'Cre03.g145547' => 'cre', 'Cre06.g303050' => 'cre', 'Cre09.g410950' => 'cre', 'Cre11.g481126' => 'cre', 'CsaV3_2G002740' => 'csa', 'CsaV3_2G026760' => 'csa', 'CsaV3_2G026770' => 'csa', 'CsaV3_2G026780' => 'csa', 'CsaV3_3G039690' => 'csa', 'CsaV3_4G017410' => 'csa', 'CsaV3_4G028560' => 'csa', 'CsaV3_4G029030' => 'csa', 'CsaV3_5G023350' => 'csa', 'CsaV3_5G023360' => 'csa', 'CsaV3_5G023370' => 'csa', 'CSS0016952' => 'camsi', 'CSS0027199' => 'camsi', 'CSS0031990' => 'camsi', 'CSS0033298' => 'camsi', 'CSS0047384' => 'camsi', 'CSS0049606' => 'camsi', 'DCAR_000386' => 'dca', 'DCAR_009200' => 'dca', 'DCAR_013497' => 'dca', 'DCAR_014288' => 'dca', 'DCAR_014289' => 'dca', 'DCAR_014795' => 'dca', 'DCAR_017827' => 'dca', 'DCAR_020640' => 'dca', 'Dinv03539' => 'din', 'Dinv03541' => 'din', 'Dinv14565' => 'din', 'Dinv18589' => 'din', 'Dinv27378' => 'din', 'Dinv36545' => 'din', 'Dinv37029' => 'din', 'Dinv44181' => 'din', 'Duzib041G0012' => 'dzi', 'Duzib093G1979' => 'dzi', 'Duzib116G0574' => 'dzi', 'Duzib128G0676' => 'dzi', 'Duzib150G0417' => 'dzi', 'Duzib168G1010' => 'dzi', 'Duzib168G1935' => 'dzi', 'Duzib177G0020' => 'dzi', 'ECA232G3064' => 'eca', 'ECA236G2962' => 'eca', 'ECA240G1046' => 'eca', 'ECA248G0272' => 'eca', 'EL10Ac1g00033' => 'bvu', 'EL10Ac4g08779' => 'bvu', 'EL10Ac5g11675' => 'bvu', 'EL10Ac6g14816' => 'bvu', 'EL10Ac7g16234' => 'bvu', 'EL10Ac8g18618' => 'bvu', 'Eucgr.B03792' => 'egr', 'Eucgr.C01134' => 'egr', 'Eucgr.F03744' => 'egr', 'Eucgr.G02644' => 'egr', 'Eucgr.G02645' => 'egr', 'Eucgr.G02646' => 'egr', 'Eucgr.G02647' => 'egr', 'Eucgr.G02648' => 'egr', 'Eucgr.K01543' => 'egr', 'Eucgr.L01814' => 'egr', 'Eucgr.L01815' => 'egr', 'Eucgr.L02937' => 'egr', 'FAN04G1553' => 'fan', 'FAN08G0223' => 'fan', 'FAN11G0376' => 'fan', 'FAN13G1442' => 'fan', 'FAN16G3302' => 'fan', 'FAN18G4378' => 'fan', 'FAN19G0775' => 'fan', 'FAN19G2791' => 'fan', 'FAN23G0118' => 'fan', 'FAN23G2794' => 'fan', 'FAN25G0542' => 'fan', 'FAN26G2078' => 'fan', 'FAN26G2816' => 'fan', 'FAN28G2833' => 'fan', 'FvH4_1g03580' => 'fve', 'FvH4_1g29800' => 'fve', 'FvH4_3g27250' => 'fve', 'FvH4_5g39010' => 'fve', 'Glyma.03G006900' => 'gma', 'Glyma.05G008100' => 'gma', 'Glyma.06G109200' => 'gma', 'Glyma.06G109250' => 'gma', 'Glyma.08G228300' => 'gma', 'Glyma.13G084000' => 'gma', 'Glyma.14G164900' => 'gma', 'Glyma.14G165000' => 'gma', 'Glyma.15G220800' => 'gma', 'Glyma.17G116400' => 'gma', 'Glyma.19G119000' => 'gma', 'Glyma.20G057600' => 'gma', 'Gohir.A01G187900' => 'ghi', 'Gohir.A02G074700' => 'ghi', 'Gohir.A06G057300' => 'ghi', 'Gohir.A08G053050' => 'ghi', 'Gohir.A08G220900' => 'ghi', 'Gohir.A09G105000' => 'ghi', 'Gohir.A11G226400' => 'ghi', 'Gohir.A11G227100' => 'ghi', 'Gohir.D01G181700' => 'ghi', 'Gohir.D02G081700' => 'ghi', 'Gohir.D04G151650' => 'ghi', 'Gohir.D06G055600' => 'ghi', 'Gohir.D08G062600' => 'ghi', 'Gohir.D08G237500' => 'ghi', 'Gohir.D08G237600' => 'ghi', 'Gohir.D08G259950' => 'ghi', 'Gohir.D09G101700' => 'ghi', 'Gohir.D11G201566' => 'ghi', 'Gohir.D11G239400' => 'ghi', 'Gohir.D11G239450' => 'ghi', 'Gohir.D11G239500' => 'ghi', 'Gorai.002G220700' => 'gra', 'Gorai.004G064800' => 'gra', 'Gorai.004G253100' => 'gra', 'Gorai.004G277800' => 'gra', 'Gorai.005G091600' => 'gra', 'Gorai.006G119100' => 'gra', 'Gorai.007G252900' => 'gra', 'Gorai.007G253000' => 'gra', 'Gorai.007G253100' => 'gra', 'Gorai.010G064900' => 'gra', 'Gorai.012G138400' => 'gra', 'GSVIVG01008935001' => 'vvi', 'GSVIVG01015504001' => 'vvi', 'GSVIVG01027210001' => 'vvi', 'GSVIVG01029937001' => 'vvi', 'GSVIVG01037441001' => 'vvi', 'HanXRQChr04g0125521' => 'han', 'HanXRQChr06g0178121' => 'han', 'HanXRQChr09g0257821' => 'han', 'HanXRQChr12g0356351' => 'han', 'HanXRQChr12g0376121' => 'han', 'HanXRQChr13g0406471' => 'han', 'HanXRQChr15g0487461' => 'han', 'Haze_00518' => 'cav', 'Haze_03408' => 'cav', 'Haze_15953' => 'cav', 'Haze_15954' => 'cav', 'Haze_15955' => 'cav', 'Haze_20388' => 'cav', 'Haze_23637' => 'cav', 'Haze_27739' => 'cav', 'Hma1.2p1_0151F.1_g067440' => 'hma', 'Hma1.2p1_0188F.1_g082470' => 'hma', 'Hma1.2p1_0665F.1_g199140' => 'hma', 'Hma1.2p1_1544F.1_g289890' => 'hma', 'HPP92_000789' => 'vpl', 'HPP92_000811' => 'vpl', 'HPP92_005148' => 'vpl', 'HPP92_010974' => 'vpl', 'HPP92_010975' => 'vpl', 'Hund09143' => 'sun', 'Hund16825' => 'sun', 'Hund20977' => 'sun', 'Hund27052' => 'sun', 'Lalb_Chr07g0178811' => 'lal', 'Lalb_Chr08g0241671' => 'lal', 'Lalb_Chr12g0197821' => 'lal', 'Lalb_Chr14g0364971' => 'lal', 'Lalb_Chr19g0132521' => 'lal', 'Lalb_Chr22g0358461' => 'lal', 'Lj1C1069G3' => 'lonja', 'Lj1g0009233' => 'lja', 'Lj1g0019275' => 'lja', 'Lj2C908G4' => 'lonja', 'Lj3g0010071' => 'lja', 'Lj4A40T47' => 'lonja', 'Lj4C40T2' => 'lonja', 'Lj4g0001261' => 'lja', 'Lj7A494G41' => 'lonja', 'Lj7A494T47' => 'lonja', 'Lj7A632G43' => 'lonja', 'Lj7A632G44' => 'lonja', 'Lj7C216T0' => 'lonja', 'Lj7C308T0' => 'lonja', 'Lsat_1_v5_gn_2_95180' => 'lsa', 'Lsat_1_v5_gn_4_177141' => 'lsa', 'Lsat_1_v5_gn_4_23940' => 'lsa', 'Lsat_1_v5_gn_5_154461' => 'lsa', 'Lsat_1_v5_gn_5_97060' => 'lsa', 'Lsat_1_v5_gn_7_94901' => 'lsa', 'Lsat_1_v5_gn_8_106740' => 'lsa', 'Manes.04G055700' => 'mes', 'Manes.06G049900' => 'mes', 'Manes.09G135900' => 'mes', 'Manes.14G130700' => 'mes', 'Manes.18G073250' => 'mes', 'Manes.S076800' => 'mes', 'Mapoly0013s0176' => 'mpo', 'Mapoly0023s0052' => 'mpo', 'Mapoly0086s0054' => 'mpo', 'Mapoly0097s0074' => 'mpo', 'MBI03_g11129_MAGBIO' => 'mbi', 'MBI03_g11130_MAGBIO' => 'mbi', 'MBI03_g11150_MAGBIO' => 'mbi', 'MBI13_g41273_MAGBIO' => 'mbi', 'MBI19_g01934_MAGBIO' => 'mbi', 'MBI19_g34089_MAGBIO' => 'mbi', 'MCO01G186' => 'mco', 'MCO02G435' => 'mco', 'MCO04G054' => 'mco', 'MCO04G200' => 'mco', 'MCO12G322' => 'mco', 'MD00G1107200' => 'mdo', 'MD02G1035100' => 'mdo', 'MD08G1172400' => 'mdo', 'MD12G1013300' => 'mdo', 'MD14G1010800' => 'mdo', 'MD15G1357900' => 'mdo', 'Medtr3g073150' => 'mtr', 'Medtr3g073180' => 'mtr', 'Medtr3g079510' => 'mtr', 'Medtr3g479590' => 'mtr', 'Medtr4g113900' => 'mtr', 'Medtr4g114030' => 'mtr', 'Medtr5g059820' => 'mtr', 'Medtr7g087090' => 'mtr', 'Medtr8g044160' => 'mtr', 'MELO3C004519.2' => 'cme', 'MELO3C009710.2' => 'cme', 'MELO3C010444.2' => 'cme', 'MELO3C014713.2' => 'cme', 'MELO3C019165.2' => 'cme', 'MELO3C022772.2' => 'cme', 'Migut.C01185' => 'egut', 'Migut.J01170' => 'egut', 'Migut.J01171' => 'egut', 'Migut.J01536' => 'egut', 'Migut.K00216' => 'egut', 'MSTRG.10752' => 'ama', 'MSTRG.19606' => 'ama', 'MSTRG.19731' => 'ama', 'MSTRG.25413' => 'ama', 'MSTRG.26206' => 'ama', 'MSTRG.6252' => 'ama', 'Nitab4.5_0000613g0050' => 'nta', 'Nitab4.5_0001141g0010' => 'nta', 'Nitab4.5_0001438g0140' => 'nta', 'Nitab4.5_0001623g0020' => 'nta', 'Nitab4.5_0002857g0010' => 'nta', 'Nitab4.5_0003302g0080' => 'nta', 'Nitab4.5_0004148g0070' => 'nta', 'Nitab4.5_0004801g0060' => 'nta', 'Nitab4.5_0023821g0010' => 'nta', 'Nn1g08621' => 'nnu', 'Nn4g25004' => 'nnu', 'Nn5g28059' => 'nnu', 'Nn7g37933' => 'nnu', 'Nn8g39389' => 'nnu', 'Nn8g39580' => 'nnu', 'Oeu029774.2' => 'oeu', 'Oeu032948.1' => 'oeu', 'Oeu032949.1' => 'oeu', 'Oeu032964.2' => 'oeu', 'Oeu043787.1' => 'oeu', 'Oeu043957.1' => 'oeu', 'Oeu044205.1' => 'oeu', 'Oeu050263.1' => 'oeu', 'Oeu058057.2' => 'oeu', 'Oeu058063.1' => 'oeu', 'Os01g0174300' => 'osa', 'Os01g0814900' => 'osa', 'Os02g0770800' => 'osa', 'Os05g0488900' => 'osa', 'Os08g0468100' => 'osa', 'Os08g0468700' => 'osa', 'Peaxi162Scf00004g00362' => 'pax', 'Peaxi162Scf00063g00121' => 'pax', 'Peaxi162Scf00343g00049' => 'pax', 'Peaxi162Scf00369g00064' => 'pax', 'Peaxi162Scf00369g00065' => 'pax', 'Peaxi162Scf00476g00046' => 'pax', 'Peaxi162Scf00476g00632' => 'pax', 'Peaxi162Scf00575g00039' => 'pax', 'Peaxi162Scf00958g00036' => 'pax', 'Peaxi162Scf00958g00037' => 'pax', 'Peaxi162Scf01400g00021' => 'pax', 'PGR042G3238' => 'pgr', 'PGR044G1193' => 'pgr', 'PGR102G2134' => 'pgr', 'PGR102G3364' => 'pgr', 'PGR142G1426' => 'pgr', 'PGR142G2734' => 'pgr', 'PGSC0003DMG400028214' => 'stu', 'PGSC0003DMG400030212' => 'stu', 'Phvul.001G107300' => 'pvu', 'Phvul.003G162900' => 'pvu', 'Phvul.008G168000' => 'pvu', 'Phvul.009G121000' => 'pvu', 'Phvul.011G187800' => 'pvu', 'Potri.002G088600' => 'ptr', 'Potri.004G194400' => 'ptr', 'Potri.005G172400' => 'ptr', 'Potri.006G218600' => 'ptr', 'Potri.007G072750' => 'ptr', 'Potri.009G157000' => 'ptr', 'Potri.010G246800' => 'ptr', 'Potri.013G067300' => 'ptr', 'Potri.015G068500' => 'ptr', 'Pp3c10_9540' => 'ppa', 'Pp3c10_9670' => 'ppa', 'Pp3c14_9410' => 'ppa', 'Pp3c1_15390' => 'ppa', 'Pp3c2_21100' => 'ppa', 'Pp3c4_18080' => 'ppa', 'Pp3c6_18860' => 'ppa', 'PRCOL_00000542' => 'pco', 'PRCOL_00001335' => 'pco', 'PRCOL_00003047' => 'pco', 'PRCOL_00004551' => 'pco', 'PRCOL_00004594' => 'pco', 'PRCOL_00005404' => 'pco', 'Prupe.1G505400' => 'ppe', 'Prupe.6G154300' => 'ppe', 'Prupe.7G017700' => 'ppe', 'Prupe.7G239800' => 'ppe', 'Psat0s3059g0080' => 'psa', 'Psat2g077040' => 'psa', 'Psat3g085480' => 'psa', 'Psat4g040440' => 'psa', 'Psat5g112400' => 'psa', 'Psat5g134440' => 'psa', 'PSO170G4324' => 'pso', 'PSO170G5562' => 'pso', 'PSO339G0893' => 'pso', 'PSO384G4743' => 'pso', 'PSO455G0024' => 'pso', 'PSO455G0205' => 'pso', 'PSO528G0278' => 'pso', 'QL01p020512' => 'qlo', 'QL02p087833' => 'qlo', 'QL04p050355' => 'qlo', 'QL04p050360' => 'qlo', 'QL04p050375' => 'qlo', 'QL07p016696' => 'qlo', 'QL09p037275' => 'qlo', 'RcHm_v2.0_Chr1g0371001' => 'rch', 'RcHm_v2.0_Chr2g0089111' => 'rch', 'RcHm_v2.0_Chr3g0485111' => 'rch', 'RcHm_v2.0_Chr3g0495881' => 'rch', 'RcHm_v2.0_Chr5g0049861' => 'rch', 'RcHm_v2.0_Chr7g0240971' => 'rch', 'Rhsim01G0076500' => 'rsi', 'Rhsim03G0046200' => 'rsi', 'Rhsim06G0108700' => 'rsi', 'Rhsim06G0108800' => 'rsi', 'Rhsim08G0072000' => 'rsi', 'Rhsim08G0072100' => 'rsi', 'Rhsim13G0200400' => 'rsi', 'Sabra02G0069800' => 'sbr', 'Sabra05G0130000' => 'sbr', 'Sabra06G0168500' => 'sbr', 'Sabra09G0122800' => 'sbr', 'Sabra10G0192300' => 'sbr', 'Sabra13G0058700' => 'sbr', 'SalBow7G1618' => 'sbo', 'SalBow7G4024' => 'sbo', 'Sc01g0001500' => 'sci', 'Sc07g0007650' => 'sci', 'Sc18g0000690' => 'sci', 'Sed0004027' => 'sed', 'Sed0004439' => 'sed', 'Sed0010585' => 'sed', 'Sed0014084' => 'sed', 'Sed0017233' => 'sed', 'Sed0018365' => 'sed', 'Sed0022627' => 'sed', 'Sed0025281' => 'sed', 'SEGI_07411' => 'sgi', 'SEGI_18220' => 'sgi', 'SEGI_20596' => 'sgi', 'SGA_v2.0_scaffold17G07978' => 'sas', 'SGA_v2.0_scaffold229G43326' => 'sas', 'SGA_v2.0_scaffold45G17070' => 'sas', 'SGA_v2.0_scaffold52G19019' => 'sas', 'SGA_v2.0_scaffold66G22378' => 'sas', 'SGA_v2.0_scaffold69G23220' => 'sas', 'SHI14863' => 'shi', 'SHI14864' => 'shi', 'SMO134G0168' => 'smo', 'SMO331G0069' => 'smo', 'Solyc05g018520.3' => 'sly', 'Solyc10g081440.2' => 'sly', 'Solyc11g013810.3' => 'sly', 'Sopen05g015640' => 'spe', 'Sopen10g031940' => 'spe', 'Sopen11g008740' => 'spe', 'Sp1g31260' => 'spa', 'Sp5g32930' => 'spa', 'Sp6g24330' => 'spa', 'Sp6g26480' => 'spa', 'TAR623G0776' => 'tar', 'TAR624G1222' => 'tar', 'TAR625G0129' => 'tar', 'TAR628G1493' => 'tar', 'TAR633G2746' => 'tar', 'TAR636G0812' => 'tar', 'THA.LOC104798845' => 'tha', 'THA.LOC104799648' => 'tha', 'THA.LOC104813138' => 'tha', 'THA.LOC104813644' => 'tha', 'THA.LOC104817024' => 'tha', 'THA.LOC104820801' => 'tha', 'Thecc.05G239600' => 'tca', 'Thecc.08G117500' => 'tca', 'Thecc.09G123300' => 'tca', 'Thecc.09G263700' => 'tca', 'Thhalv10003628m.g' => 'esa', 'Thhalv10014199m.g' => 'esa', 'Thhalv10014327m.g' => 'esa', 'Thhalv10018092m.g' => 'esa', 'TPR.G32932' => 'tpr', 'TPR.G32938' => 'tpr', 'TPR.G32951' => 'tpr', 'TPR.G35748' => 'tpr', 'TPR.G37984' => 'tpr', 'TPR.G7839' => 'tpr', 'TPR.G8508' => 'tpr', 'TWI32G0011' => 'twi', 'TWI34G0260' => 'twi', 'TWI56G0099' => 'twi', 'TWI60G0536' => 'twi', 'TWI63G0382' => 'twi', 'TWI79G0752' => 'twi', 'unitig_21.g20659' => 'ugi', 'unitig_699.g19212' => 'ugi', 'unitig_744.g23958' => 'ugi', 'vmacro04069' => 'vma', 'vmacro04070' => 'vma', 'vmacro07640' => 'vma', 'vmacro12531' => 'vma', 'vmacro20489' => 'vma', 'vmacro20598' => 'vma', 'VMungo0647G0621' => 'vmu', 'VMungo1127G1753' => 'vmu', 'VMungo1215G2224' => 'vmu', 'VMungo1309G2713' => 'vmu', 'VMungo1383G1796' => 'vmu', 'Zm00001eb037860' => 'zma', 'Zm00001eb082240' => 'zma', 'Zm00001eb122720' => 'zma', 'Zm00001eb149860' => 'zma', 'Zm00001eb152720' => 'zma', 'Zm00001eb176470' => 'zma', 'Zm00001eb193390' => 'zma', 'Zm00001eb209630' => 'zma', 'Zm00001eb213470' => 'zma', 'Zm00001eb245550' => 'zma', 'Zm00001eb256260' => 'zma', 'Zm00001eb291160' => 'zma', 'Zm00001eb346170' => 'zma', 'Zm00001eb390110' => 'zma', 'Zm00001eb425210' => 'zma', 'Zm00001eb429490' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D000951', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000951' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D000951', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '631', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000951' ) ), 'genes' => array( 'A02p04440' => 'bna', 'A02p21820' => 'bna', 'A02p21830' => 'bna', 'A03p08480' => 'bna', 'A07p15250' => 'bna', 'A07p27850' => 'bna', 'A07p43060' => 'bna', 'A10p21680' => 'bna', 'Aa31LG11G11810' => 'aar', 'Aa31LG4G7870' => 'aar', 'Aa31LG6G8050' => 'aar', 'Aa31LG6G9110' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.2307' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3621' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5248' => 'aag', 'Actinidia02592' => 'ach', 'Actinidia18376' => 'ach', 'Actinidia22002' => 'ach', 'Actinidia37832' => 'ach', 'Ah.05g172520' => 'amhyb', 'Ah.05g172530' => 'amhyb', 'Ah.06g191190' => 'amhyb', 'Ah.12g061950' => 'amhyb', 'Ah.15g099310' => 'amhyb', 'Ah.16g110180' => 'amhyb', 'AL1G51170' => 'aly', 'AL2G37990' => 'aly', 'AL6G28860' => 'aly', 'AL6G31630' => 'aly', 'Aqoxy1G00099' => 'aox', 'Aqoxy1G04088' => 'aox', 'Aqoxy6G00153' => 'aox', 'Aqoxy7G02098' => 'aox', 'Aqoxy7G02149' => 'aox', 'arahy.Tifrunner.gnm1.ann1.34G2NL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L21K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B1DGRD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B2KMHD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FIU44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9J1TW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y57IDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YZT8QC' => 'arhy', 'AT1G37130' => 'ath', 'AT1G77760' => 'ath', 'AT5G17770' => 'ath', 'AT5G20080' => 'ath', 'ATR0068G079' => 'atr', 'ATR0684G206' => 'atr', 'ATR1156G037' => 'atr', 'Atru.chr13.1323' => 'acertr', 'Atru.chr13.1367' => 'acertr', 'Atru.chr2.1564' => 'acertr', 'Atru.chr3.2915' => 'acertr', 'Atru.chr7.1199' => 'acertr', 'Atru.chr8.893' => 'acertr', 'Atru.chr8.894' => 'acertr', 'AUR62001601' => 'cqu', 'AUR62004699' => 'cqu', 'AUR62011088' => 'cqu', 'AUR62011089' => 'cqu', 'AUR62011110' => 'cqu', 'AUR62011111' => 'cqu', 'AUR62020178' => 'cqu', 'AUR62023616' => 'cqu', 'AUR62033478' => 'cqu', 'AUR62036515' => 'cqu', 'AUR62037059' => 'cqu', 'BcaB01g04810' => 'bca', 'BcaB01g04911' => 'bca', 'BcaB01g05154' => 'bca', 'BcaB02g07129' => 'bca', 'BcaB03g15925' => 'bca', 'BcaB05g23276' => 'bca', 'BcaB05g25075' => 'bca', 'BcaB08g36746' => 'bca', 'BcaC03g13542' => 'bca', 'BcaC03g15090' => 'bca', 'BcaC03g15770' => 'bca', 'BcaC08g45455' => 'bca', 'BolC2t06841H' => 'bol', 'BolC2t07884H' => 'bol', 'BolC2t08722H' => 'bol', 'BolC2t09525H' => 'bol', 'BolC3t13476H' => 'bol', 'BolC6t35954H' => 'bol', 'BolC6t38246H' => 'bol', 'BolC6t40193H' => 'bol', 'BraA02t05408Z' => 'bra', 'BraA02t07185Z' => 'bra', 'BraA03t10171Z' => 'bra', 'BraA07t30424Z' => 'bra', 'BraA07t31827Z' => 'bra', 'C02p09340' => 'bna', 'C02p26490' => 'bna', 'C02p35110' => 'bna', 'C03p09880' => 'bna', 'C06p30820' => 'bna', 'C06p51710' => 'bna', 'C09p66260' => 'bna', 'CAN.G128.141' => 'can', 'CAN.G372.2' => 'can', 'CAN.G44.5' => 'can', 'CAN.G935.7' => 'can', 'CANSAT11G2446' => 'cansat', 'CANSAT25G1717' => 'cansat', 'CANSAT78G1357' => 'cansat', 'CARHR034720' => 'chi', 'CARHR071270' => 'chi', 'CARHR192750' => 'chi', 'CARHR195400' => 'chi', 'Carub.0001s3407' => 'cru', 'Carub.0002s2466' => 'cru', 'Carub.0006s1600' => 'cru', 'Carub.0006s1846' => 'cru', 'Ca_03444_v3' => 'car', 'Ca_12170_v3' => 'car', 'Ca_12848_v3' => 'car', 'Ca_15220_v3' => 'car', 'Ca_16254_v3' => 'car', 'Ca_21695_v3' => 'car', 'CBR_g36815' => 'cbr', 'CBR_g36817' => 'cbr', 'CBR_g4013' => 'cbr', 'CBR_g45637' => 'cbr', 'CBR_g46196' => 'cbr', 'CBR_g46198' => 'cbr', 'CBR_g46200' => 'cbr', 'CBR_g46898' => 'cbr', 'Cc00_g12040' => 'ccan', 'Cc06_g08770' => 'ccan', 'Cc06_g21550' => 'ccan', 'Cc10_g14390' => 'ccan', 'CDE02G2349' => 'cde', 'CDE04G2035' => 'cde', 'CDE06G0176' => 'cde', 'CDE06G2658' => 'cde', 'Cfa010247' => 'cfa', 'Cfa010454' => 'cfa', 'Cfa015964' => 'cfa', 'Cfa019869' => 'cfa', 'Cfa022855' => 'cfa', 'Cfa025215' => 'cfa', 'Cfa026789' => 'cfa', 'Cfa026899' => 'cfa', 'Cfa027359' => 'cfa', 'Ciclev10000220m.g' => 'ccl', 'Ciclev10008900m.g' => 'ccl', 'Ciclev10018119m.g' => 'ccl', 'Ciclev10018210m.g' => 'ccl', 'Ciclev10032349m.g' => 'ccl', 'CiPaw.03G242000' => 'cil', 'CiPaw.05G228100' => 'cil', 'CiPaw.06G025400' => 'cil', 'CiPaw.09G165700' => 'cil', 'CiPaw.13G047000' => 'cil', 'CiPaw.13G127400' => 'cil', 'ClCG02G024270' => 'cla', 'ClCG03G009280' => 'cla', 'ClCG03G009290' => 'cla', 'ClCG04G005060' => 'cla', 'ClCG10G016650' => 'cla', 'ClCG11G002910' => 'cla', 'ClCG11G015520' => 'cla', 'COL.COLO4_05763' => 'col', 'COL.COLO4_06727' => 'col', 'COL.COLO4_25291' => 'col', 'COL.COLO4_32799' => 'col', 'Cpa.g.c35493' => 'cpa', 'Cpa.g.sc49.137' => 'cpa', 'Cpa.g.sc73.10' => 'cpa', 'Cre03.g145547' => 'cre', 'Cre06.g303050' => 'cre', 'Cre09.g410950' => 'cre', 'Cre11.g481126' => 'cre', 'CsaV3_2G002740' => 'csa', 'CsaV3_2G026760' => 'csa', 'CsaV3_2G026770' => 'csa', 'CsaV3_2G026780' => 'csa', 'CsaV3_3G039690' => 'csa', 'CsaV3_4G017410' => 'csa', 'CsaV3_4G028560' => 'csa', 'CsaV3_4G029030' => 'csa', 'CsaV3_5G023350' => 'csa', 'CsaV3_5G023360' => 'csa', 'CsaV3_5G023370' => 'csa', 'CSS0016952' => 'camsi', 'CSS0027199' => 'camsi', 'CSS0031990' => 'camsi', 'CSS0033298' => 'camsi', 'CSS0047384' => 'camsi', 'CSS0049606' => 'camsi', 'DCAR_000386' => 'dca', 'DCAR_009200' => 'dca', 'DCAR_013497' => 'dca', 'DCAR_014288' => 'dca', 'DCAR_014289' => 'dca', 'DCAR_014795' => 'dca', 'DCAR_017827' => 'dca', 'DCAR_020640' => 'dca', 'Dinv03539' => 'din', 'Dinv03541' => 'din', 'Dinv14565' => 'din', 'Dinv18589' => 'din', 'Dinv27378' => 'din', 'Dinv36545' => 'din', 'Dinv37029' => 'din', 'Dinv44181' => 'din', 'Duzib041G0012' => 'dzi', 'Duzib093G1979' => 'dzi', 'Duzib116G0574' => 'dzi', 'Duzib128G0676' => 'dzi', 'Duzib150G0417' => 'dzi', 'Duzib168G1010' => 'dzi', 'Duzib168G1935' => 'dzi', 'Duzib177G0020' => 'dzi', 'ECA232G3064' => 'eca', 'ECA236G2962' => 'eca', 'ECA240G1046' => 'eca', 'ECA248G0272' => 'eca', 'EL10Ac1g00033' => 'bvu', 'EL10Ac4g08779' => 'bvu', 'EL10Ac5g11675' => 'bvu', 'EL10Ac6g14816' => 'bvu', 'EL10Ac7g16234' => 'bvu', 'EL10Ac8g18618' => 'bvu', 'Eucgr.B03792' => 'egr', 'Eucgr.C01134' => 'egr', 'Eucgr.F03744' => 'egr', 'Eucgr.G02644' => 'egr', 'Eucgr.G02645' => 'egr', 'Eucgr.G02646' => 'egr', 'Eucgr.G02647' => 'egr', 'Eucgr.G02648' => 'egr', 'Eucgr.K01543' => 'egr', 'Eucgr.L01814' => 'egr', 'Eucgr.L01815' => 'egr', 'Eucgr.L02937' => 'egr', 'FAN04G1553' => 'fan', 'FAN08G0223' => 'fan', 'FAN11G0376' => 'fan', 'FAN13G1442' => 'fan', 'FAN16G3302' => 'fan', 'FAN18G4378' => 'fan', 'FAN19G0775' => 'fan', 'FAN19G2791' => 'fan', 'FAN23G0118' => 'fan', 'FAN23G2794' => 'fan', 'FAN25G0542' => 'fan', 'FAN26G2078' => 'fan', 'FAN26G2816' => 'fan', 'FAN28G2833' => 'fan', 'FvH4_1g03580' => 'fve', 'FvH4_1g29800' => 'fve', 'FvH4_3g27250' => 'fve', 'FvH4_5g39010' => 'fve', 'Glyma.03G006900' => 'gma', 'Glyma.05G008100' => 'gma', 'Glyma.06G109200' => 'gma', 'Glyma.06G109250' => 'gma', 'Glyma.08G228300' => 'gma', 'Glyma.13G084000' => 'gma', 'Glyma.14G164900' => 'gma', 'Glyma.14G165000' => 'gma', 'Glyma.15G220800' => 'gma', 'Glyma.17G116400' => 'gma', 'Glyma.19G119000' => 'gma', 'Glyma.20G057600' => 'gma', 'Gohir.A01G187900' => 'ghi', 'Gohir.A02G074700' => 'ghi', 'Gohir.A06G057300' => 'ghi', 'Gohir.A08G053050' => 'ghi', 'Gohir.A08G220900' => 'ghi', 'Gohir.A09G105000' => 'ghi', 'Gohir.A11G226400' => 'ghi', 'Gohir.A11G227100' => 'ghi', 'Gohir.D01G181700' => 'ghi', 'Gohir.D02G081700' => 'ghi', 'Gohir.D04G151650' => 'ghi', 'Gohir.D06G055600' => 'ghi', 'Gohir.D08G062600' => 'ghi', 'Gohir.D08G237500' => 'ghi', 'Gohir.D08G237600' => 'ghi', 'Gohir.D08G259950' => 'ghi', 'Gohir.D09G101700' => 'ghi', 'Gohir.D11G201566' => 'ghi', 'Gohir.D11G239400' => 'ghi', 'Gohir.D11G239450' => 'ghi', 'Gohir.D11G239500' => 'ghi', 'Gorai.002G220700' => 'gra', 'Gorai.004G064800' => 'gra', 'Gorai.004G253100' => 'gra', 'Gorai.004G277800' => 'gra', 'Gorai.005G091600' => 'gra', 'Gorai.006G119100' => 'gra', 'Gorai.007G252900' => 'gra', 'Gorai.007G253000' => 'gra', 'Gorai.007G253100' => 'gra', 'Gorai.010G064900' => 'gra', 'Gorai.012G138400' => 'gra', 'GSVIVG01008935001' => 'vvi', 'GSVIVG01015504001' => 'vvi', 'GSVIVG01027210001' => 'vvi', 'GSVIVG01029937001' => 'vvi', 'GSVIVG01037441001' => 'vvi', 'HanXRQChr04g0125521' => 'han', 'HanXRQChr06g0178121' => 'han', 'HanXRQChr09g0257821' => 'han', 'HanXRQChr12g0356351' => 'han', 'HanXRQChr12g0376121' => 'han', 'HanXRQChr13g0406471' => 'han', 'HanXRQChr15g0487461' => 'han', 'Haze_00518' => 'cav', 'Haze_03408' => 'cav', 'Haze_15953' => 'cav', 'Haze_15954' => 'cav', 'Haze_15955' => 'cav', 'Haze_20388' => 'cav', 'Haze_23637' => 'cav', 'Haze_27739' => 'cav', 'Hma1.2p1_0151F.1_g067440' => 'hma', 'Hma1.2p1_0188F.1_g082470' => 'hma', 'Hma1.2p1_0665F.1_g199140' => 'hma', 'Hma1.2p1_1544F.1_g289890' => 'hma', 'HPP92_000789' => 'vpl', 'HPP92_000811' => 'vpl', 'HPP92_005148' => 'vpl', 'HPP92_010974' => 'vpl', 'HPP92_010975' => 'vpl', 'Hund09143' => 'sun', 'Hund16825' => 'sun', 'Hund20977' => 'sun', 'Hund27052' => 'sun', 'Lalb_Chr07g0178811' => 'lal', 'Lalb_Chr08g0241671' => 'lal', 'Lalb_Chr12g0197821' => 'lal', 'Lalb_Chr14g0364971' => 'lal', 'Lalb_Chr19g0132521' => 'lal', 'Lalb_Chr22g0358461' => 'lal', 'Lj1C1069G3' => 'lonja', 'Lj1g0009233' => 'lja', 'Lj1g0019275' => 'lja', 'Lj2C908G4' => 'lonja', 'Lj3g0010071' => 'lja', 'Lj4A40T47' => 'lonja', 'Lj4C40T2' => 'lonja', 'Lj4g0001261' => 'lja', 'Lj7A494G41' => 'lonja', 'Lj7A494T47' => 'lonja', 'Lj7A632G43' => 'lonja', 'Lj7A632G44' => 'lonja', 'Lj7C216T0' => 'lonja', 'Lj7C308T0' => 'lonja', 'Lsat_1_v5_gn_2_95180' => 'lsa', 'Lsat_1_v5_gn_4_177141' => 'lsa', 'Lsat_1_v5_gn_4_23940' => 'lsa', 'Lsat_1_v5_gn_5_154461' => 'lsa', 'Lsat_1_v5_gn_5_97060' => 'lsa', 'Lsat_1_v5_gn_7_94901' => 'lsa', 'Lsat_1_v5_gn_8_106740' => 'lsa', 'Manes.04G055700' => 'mes', 'Manes.06G049900' => 'mes', 'Manes.09G135900' => 'mes', 'Manes.14G130700' => 'mes', 'Manes.18G073250' => 'mes', 'Manes.S076800' => 'mes', 'Mapoly0013s0176' => 'mpo', 'Mapoly0023s0052' => 'mpo', 'Mapoly0086s0054' => 'mpo', 'Mapoly0097s0074' => 'mpo', 'MBI03_g11129_MAGBIO' => 'mbi', 'MBI03_g11130_MAGBIO' => 'mbi', 'MBI03_g11150_MAGBIO' => 'mbi', 'MBI13_g41273_MAGBIO' => 'mbi', 'MBI19_g01934_MAGBIO' => 'mbi', 'MBI19_g34089_MAGBIO' => 'mbi', 'MCO01G186' => 'mco', 'MCO02G435' => 'mco', 'MCO04G054' => 'mco', 'MCO04G200' => 'mco', 'MCO12G322' => 'mco', 'MD00G1107200' => 'mdo', 'MD02G1035100' => 'mdo', 'MD08G1172400' => 'mdo', 'MD12G1013300' => 'mdo', 'MD14G1010800' => 'mdo', 'MD15G1357900' => 'mdo', 'Medtr3g073150' => 'mtr', 'Medtr3g073180' => 'mtr', 'Medtr3g079510' => 'mtr', 'Medtr3g479590' => 'mtr', 'Medtr4g113900' => 'mtr', 'Medtr4g114030' => 'mtr', 'Medtr5g059820' => 'mtr', 'Medtr7g087090' => 'mtr', 'Medtr8g044160' => 'mtr', 'MELO3C004519.2' => 'cme', 'MELO3C009710.2' => 'cme', 'MELO3C010444.2' => 'cme', 'MELO3C014713.2' => 'cme', 'MELO3C019165.2' => 'cme', 'MELO3C022772.2' => 'cme', 'Migut.C01185' => 'egut', 'Migut.J01170' => 'egut', 'Migut.J01171' => 'egut', 'Migut.J01536' => 'egut', 'Migut.K00216' => 'egut', 'MSTRG.10752' => 'ama', 'MSTRG.19606' => 'ama', 'MSTRG.19731' => 'ama', 'MSTRG.25413' => 'ama', 'MSTRG.26206' => 'ama', 'MSTRG.6252' => 'ama', 'Nitab4.5_0000613g0050' => 'nta', 'Nitab4.5_0001141g0010' => 'nta', 'Nitab4.5_0001438g0140' => 'nta', 'Nitab4.5_0001623g0020' => 'nta', 'Nitab4.5_0002857g0010' => 'nta', 'Nitab4.5_0003302g0080' => 'nta', 'Nitab4.5_0004148g0070' => 'nta', 'Nitab4.5_0004801g0060' => 'nta', 'Nitab4.5_0023821g0010' => 'nta', 'Nn1g08621' => 'nnu', 'Nn4g25004' => 'nnu', 'Nn5g28059' => 'nnu', 'Nn7g37933' => 'nnu', 'Nn8g39389' => 'nnu', 'Nn8g39580' => 'nnu', 'Oeu029774.2' => 'oeu', 'Oeu032948.1' => 'oeu', 'Oeu032949.1' => 'oeu', 'Oeu032964.2' => 'oeu', 'Oeu043787.1' => 'oeu', 'Oeu043957.1' => 'oeu', 'Oeu044205.1' => 'oeu', 'Oeu050263.1' => 'oeu', 'Oeu058057.2' => 'oeu', 'Oeu058063.1' => 'oeu', 'Os01g0174300' => 'osa', 'Os01g0814900' => 'osa', 'Os02g0770800' => 'osa', 'Os05g0488900' => 'osa', 'Os08g0468100' => 'osa', 'Os08g0468700' => 'osa', 'Peaxi162Scf00004g00362' => 'pax', 'Peaxi162Scf00063g00121' => 'pax', 'Peaxi162Scf00343g00049' => 'pax', 'Peaxi162Scf00369g00064' => 'pax', 'Peaxi162Scf00369g00065' => 'pax', 'Peaxi162Scf00476g00046' => 'pax', 'Peaxi162Scf00476g00632' => 'pax', 'Peaxi162Scf00575g00039' => 'pax', 'Peaxi162Scf00958g00036' => 'pax', 'Peaxi162Scf00958g00037' => 'pax', 'Peaxi162Scf01400g00021' => 'pax', 'PGR042G3238' => 'pgr', 'PGR044G1193' => 'pgr', 'PGR102G2134' => 'pgr', 'PGR102G3364' => 'pgr', 'PGR142G1426' => 'pgr', 'PGR142G2734' => 'pgr', 'PGSC0003DMG400028214' => 'stu', 'PGSC0003DMG400030212' => 'stu', 'Phvul.001G107300' => 'pvu', 'Phvul.003G162900' => 'pvu', 'Phvul.008G168000' => 'pvu', 'Phvul.009G121000' => 'pvu', 'Phvul.011G187800' => 'pvu', 'Potri.002G088600' => 'ptr', 'Potri.004G194400' => 'ptr', 'Potri.005G172400' => 'ptr', 'Potri.006G218600' => 'ptr', 'Potri.007G072750' => 'ptr', 'Potri.009G157000' => 'ptr', 'Potri.010G246800' => 'ptr', 'Potri.013G067300' => 'ptr', 'Potri.015G068500' => 'ptr', 'Pp3c10_9540' => 'ppa', 'Pp3c10_9670' => 'ppa', 'Pp3c14_9410' => 'ppa', 'Pp3c1_15390' => 'ppa', 'Pp3c2_21100' => 'ppa', 'Pp3c4_18080' => 'ppa', 'Pp3c6_18860' => 'ppa', 'PRCOL_00000542' => 'pco', 'PRCOL_00001335' => 'pco', 'PRCOL_00003047' => 'pco', 'PRCOL_00004551' => 'pco', 'PRCOL_00004594' => 'pco', 'PRCOL_00005404' => 'pco', 'Prupe.1G505400' => 'ppe', 'Prupe.6G154300' => 'ppe', 'Prupe.7G017700' => 'ppe', 'Prupe.7G239800' => 'ppe', 'Psat0s3059g0080' => 'psa', 'Psat2g077040' => 'psa', 'Psat3g085480' => 'psa', 'Psat4g040440' => 'psa', 'Psat5g112400' => 'psa', 'Psat5g134440' => 'psa', 'PSO170G4324' => 'pso', 'PSO170G5562' => 'pso', 'PSO339G0893' => 'pso', 'PSO384G4743' => 'pso', 'PSO455G0024' => 'pso', 'PSO455G0205' => 'pso', 'PSO528G0278' => 'pso', 'QL01p020512' => 'qlo', 'QL02p087833' => 'qlo', 'QL04p050355' => 'qlo', 'QL04p050360' => 'qlo', 'QL04p050375' => 'qlo', 'QL07p016696' => 'qlo', 'QL09p037275' => 'qlo', 'RcHm_v2.0_Chr1g0371001' => 'rch', 'RcHm_v2.0_Chr2g0089111' => 'rch', 'RcHm_v2.0_Chr3g0485111' => 'rch', 'RcHm_v2.0_Chr3g0495881' => 'rch', 'RcHm_v2.0_Chr5g0049861' => 'rch', 'RcHm_v2.0_Chr7g0240971' => 'rch', 'Rhsim01G0076500' => 'rsi', 'Rhsim03G0046200' => 'rsi', 'Rhsim06G0108700' => 'rsi', 'Rhsim06G0108800' => 'rsi', 'Rhsim08G0072000' => 'rsi', 'Rhsim08G0072100' => 'rsi', 'Rhsim13G0200400' => 'rsi', 'Sabra02G0069800' => 'sbr', 'Sabra05G0130000' => 'sbr', 'Sabra06G0168500' => 'sbr', 'Sabra09G0122800' => 'sbr', 'Sabra10G0192300' => 'sbr', 'Sabra13G0058700' => 'sbr', 'SalBow7G1618' => 'sbo', 'SalBow7G4024' => 'sbo', 'Sc01g0001500' => 'sci', 'Sc07g0007650' => 'sci', 'Sc18g0000690' => 'sci', 'Sed0004027' => 'sed', 'Sed0004439' => 'sed', 'Sed0010585' => 'sed', 'Sed0014084' => 'sed', 'Sed0017233' => 'sed', 'Sed0018365' => 'sed', 'Sed0022627' => 'sed', 'Sed0025281' => 'sed', 'SEGI_07411' => 'sgi', 'SEGI_18220' => 'sgi', 'SEGI_20596' => 'sgi', 'SGA_v2.0_scaffold17G07978' => 'sas', 'SGA_v2.0_scaffold229G43326' => 'sas', 'SGA_v2.0_scaffold45G17070' => 'sas', 'SGA_v2.0_scaffold52G19019' => 'sas', 'SGA_v2.0_scaffold66G22378' => 'sas', 'SGA_v2.0_scaffold69G23220' => 'sas', 'SHI14863' => 'shi', 'SHI14864' => 'shi', 'SMO134G0168' => 'smo', 'SMO331G0069' => 'smo', 'Solyc05g018520.3' => 'sly', 'Solyc10g081440.2' => 'sly', 'Solyc11g013810.3' => 'sly', 'Sopen05g015640' => 'spe', 'Sopen10g031940' => 'spe', 'Sopen11g008740' => 'spe', 'Sp1g31260' => 'spa', 'Sp5g32930' => 'spa', 'Sp6g24330' => 'spa', 'Sp6g26480' => 'spa', 'TAR623G0776' => 'tar', 'TAR624G1222' => 'tar', 'TAR625G0129' => 'tar', 'TAR628G1493' => 'tar', 'TAR633G2746' => 'tar', 'TAR636G0812' => 'tar', 'THA.LOC104798845' => 'tha', 'THA.LOC104799648' => 'tha', 'THA.LOC104813138' => 'tha', 'THA.LOC104813644' => 'tha', 'THA.LOC104817024' => 'tha', 'THA.LOC104820801' => 'tha', 'Thecc.05G239600' => 'tca', 'Thecc.08G117500' => 'tca', 'Thecc.09G123300' => 'tca', 'Thecc.09G263700' => 'tca', 'Thhalv10003628m.g' => 'esa', 'Thhalv10014199m.g' => 'esa', 'Thhalv10014327m.g' => 'esa', 'Thhalv10018092m.g' => 'esa', 'TPR.G32932' => 'tpr', 'TPR.G32938' => 'tpr', 'TPR.G32951' => 'tpr', 'TPR.G35748' => 'tpr', 'TPR.G37984' => 'tpr', 'TPR.G7839' => 'tpr', 'TPR.G8508' => 'tpr', 'TWI32G0011' => 'twi', 'TWI34G0260' => 'twi', 'TWI56G0099' => 'twi', 'TWI60G0536' => 'twi', 'TWI63G0382' => 'twi', 'TWI79G0752' => 'twi', 'unitig_21.g20659' => 'ugi', 'unitig_699.g19212' => 'ugi', 'unitig_744.g23958' => 'ugi', 'vmacro04069' => 'vma', 'vmacro04070' => 'vma', 'vmacro07640' => 'vma', 'vmacro12531' => 'vma', 'vmacro20489' => 'vma', 'vmacro20598' => 'vma', 'VMungo0647G0621' => 'vmu', 'VMungo1127G1753' => 'vmu', 'VMungo1215G2224' => 'vmu', 'VMungo1309G2713' => 'vmu', 'VMungo1383G1796' => 'vmu', 'Zm00001eb037860' => 'zma', 'Zm00001eb082240' => 'zma', 'Zm00001eb122720' => 'zma', 'Zm00001eb149860' => 'zma', 'Zm00001eb152720' => 'zma', 'Zm00001eb176470' => 'zma', 'Zm00001eb193390' => 'zma', 'Zm00001eb209630' => 'zma', 'Zm00001eb213470' => 'zma', 'Zm00001eb245550' => 'zma', 'Zm00001eb256260' => 'zma', 'Zm00001eb291160' => 'zma', 'Zm00001eb346170' => 'zma', 'Zm00001eb390110' => 'zma', 'Zm00001eb425210' => 'zma', 'Zm00001eb429490' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D000951' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000951' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D000951' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000951' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
<label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?>
<label>Source(s)</label>
<select class='form form-select' name='ontology_source_group' id='ontology_source_group'>
<?php foreach ($source_groups_information['available'] as $source_group_id) : ?>
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000951', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '631', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A02p04440' => 'bna', 'A02p21820' => 'bna', 'A02p21830' => 'bna', 'A03p08480' => 'bna', 'A07p15250' => 'bna', 'A07p27850' => 'bna', 'A07p43060' => 'bna', 'A10p21680' => 'bna', 'Aa31LG11G11810' => 'aar', 'Aa31LG4G7870' => 'aar', 'Aa31LG6G8050' => 'aar', 'Aa31LG6G9110' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.2307' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3621' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5248' => 'aag', 'Actinidia02592' => 'ach', 'Actinidia18376' => 'ach', 'Actinidia22002' => 'ach', 'Actinidia37832' => 'ach', 'Ah.05g172520' => 'amhyb', 'Ah.05g172530' => 'amhyb', 'Ah.06g191190' => 'amhyb', 'Ah.12g061950' => 'amhyb', 'Ah.15g099310' => 'amhyb', 'Ah.16g110180' => 'amhyb', 'AL1G51170' => 'aly', 'AL2G37990' => 'aly', 'AL6G28860' => 'aly', 'AL6G31630' => 'aly', 'Aqoxy1G00099' => 'aox', 'Aqoxy1G04088' => 'aox', 'Aqoxy6G00153' => 'aox', 'Aqoxy7G02098' => 'aox', 'Aqoxy7G02149' => 'aox', 'arahy.Tifrunner.gnm1.ann1.34G2NL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L21K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B1DGRD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B2KMHD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FIU44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9J1TW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y57IDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YZT8QC' => 'arhy', 'AT1G37130' => 'ath', 'AT1G77760' => 'ath', 'AT5G17770' => 'ath', 'AT5G20080' => 'ath', 'ATR0068G079' => 'atr', 'ATR0684G206' => 'atr', 'ATR1156G037' => 'atr', 'Atru.chr13.1323' => 'acertr', 'Atru.chr13.1367' => 'acertr', 'Atru.chr2.1564' => 'acertr', 'Atru.chr3.2915' => 'acertr', 'Atru.chr7.1199' => 'acertr', 'Atru.chr8.893' => 'acertr', 'Atru.chr8.894' => 'acertr', 'AUR62001601' => 'cqu', 'AUR62004699' => 'cqu', 'AUR62011088' => 'cqu', 'AUR62011089' => 'cqu', 'AUR62011110' => 'cqu', 'AUR62011111' => 'cqu', 'AUR62020178' => 'cqu', 'AUR62023616' => 'cqu', 'AUR62033478' => 'cqu', 'AUR62036515' => 'cqu', 'AUR62037059' => 'cqu', 'BcaB01g04810' => 'bca', 'BcaB01g04911' => 'bca', 'BcaB01g05154' => 'bca', 'BcaB02g07129' => 'bca', 'BcaB03g15925' => 'bca', 'BcaB05g23276' => 'bca', 'BcaB05g25075' => 'bca', 'BcaB08g36746' => 'bca', 'BcaC03g13542' => 'bca', 'BcaC03g15090' => 'bca', 'BcaC03g15770' => 'bca', 'BcaC08g45455' => 'bca', 'BolC2t06841H' => 'bol', 'BolC2t07884H' => 'bol', 'BolC2t08722H' => 'bol', 'BolC2t09525H' => 'bol', 'BolC3t13476H' => 'bol', 'BolC6t35954H' => 'bol', 'BolC6t38246H' => 'bol', 'BolC6t40193H' => 'bol', 'BraA02t05408Z' => 'bra', 'BraA02t07185Z' => 'bra', 'BraA03t10171Z' => 'bra', 'BraA07t30424Z' => 'bra', 'BraA07t31827Z' => 'bra', 'C02p09340' => 'bna', 'C02p26490' => 'bna', 'C02p35110' => 'bna', 'C03p09880' => 'bna', 'C06p30820' => 'bna', 'C06p51710' => 'bna', 'C09p66260' => 'bna', 'CAN.G128.141' => 'can', 'CAN.G372.2' => 'can', 'CAN.G44.5' => 'can', 'CAN.G935.7' => 'can', 'CANSAT11G2446' => 'cansat', 'CANSAT25G1717' => 'cansat', 'CANSAT78G1357' => 'cansat', 'CARHR034720' => 'chi', 'CARHR071270' => 'chi', 'CARHR192750' => 'chi', 'CARHR195400' => 'chi', 'Carub.0001s3407' => 'cru', 'Carub.0002s2466' => 'cru', 'Carub.0006s1600' => 'cru', 'Carub.0006s1846' => 'cru', 'Ca_03444_v3' => 'car', 'Ca_12170_v3' => 'car', 'Ca_12848_v3' => 'car', 'Ca_15220_v3' => 'car', 'Ca_16254_v3' => 'car', 'Ca_21695_v3' => 'car', 'CBR_g36815' => 'cbr', 'CBR_g36817' => 'cbr', 'CBR_g4013' => 'cbr', 'CBR_g45637' => 'cbr', 'CBR_g46196' => 'cbr', 'CBR_g46198' => 'cbr', 'CBR_g46200' => 'cbr', 'CBR_g46898' => 'cbr', 'Cc00_g12040' => 'ccan', 'Cc06_g08770' => 'ccan', 'Cc06_g21550' => 'ccan', 'Cc10_g14390' => 'ccan', 'CDE02G2349' => 'cde', 'CDE04G2035' => 'cde', 'CDE06G0176' => 'cde', 'CDE06G2658' => 'cde', 'Cfa010247' => 'cfa', 'Cfa010454' => 'cfa', 'Cfa015964' => 'cfa', 'Cfa019869' => 'cfa', 'Cfa022855' => 'cfa', 'Cfa025215' => 'cfa', 'Cfa026789' => 'cfa', 'Cfa026899' => 'cfa', 'Cfa027359' => 'cfa', 'Ciclev10000220m.g' => 'ccl', 'Ciclev10008900m.g' => 'ccl', 'Ciclev10018119m.g' => 'ccl', 'Ciclev10018210m.g' => 'ccl', 'Ciclev10032349m.g' => 'ccl', 'CiPaw.03G242000' => 'cil', 'CiPaw.05G228100' => 'cil', 'CiPaw.06G025400' => 'cil', 'CiPaw.09G165700' => 'cil', 'CiPaw.13G047000' => 'cil', 'CiPaw.13G127400' => 'cil', 'ClCG02G024270' => 'cla', 'ClCG03G009280' => 'cla', 'ClCG03G009290' => 'cla', 'ClCG04G005060' => 'cla', 'ClCG10G016650' => 'cla', 'ClCG11G002910' => 'cla', 'ClCG11G015520' => 'cla', 'COL.COLO4_05763' => 'col', 'COL.COLO4_06727' => 'col', 'COL.COLO4_25291' => 'col', 'COL.COLO4_32799' => 'col', 'Cpa.g.c35493' => 'cpa', 'Cpa.g.sc49.137' => 'cpa', 'Cpa.g.sc73.10' => 'cpa', 'Cre03.g145547' => 'cre', 'Cre06.g303050' => 'cre', 'Cre09.g410950' => 'cre', 'Cre11.g481126' => 'cre', 'CsaV3_2G002740' => 'csa', 'CsaV3_2G026760' => 'csa', 'CsaV3_2G026770' => 'csa', 'CsaV3_2G026780' => 'csa', 'CsaV3_3G039690' => 'csa', 'CsaV3_4G017410' => 'csa', 'CsaV3_4G028560' => 'csa', 'CsaV3_4G029030' => 'csa', 'CsaV3_5G023350' => 'csa', 'CsaV3_5G023360' => 'csa', 'CsaV3_5G023370' => 'csa', 'CSS0016952' => 'camsi', 'CSS0027199' => 'camsi', 'CSS0031990' => 'camsi', 'CSS0033298' => 'camsi', 'CSS0047384' => 'camsi', 'CSS0049606' => 'camsi', 'DCAR_000386' => 'dca', 'DCAR_009200' => 'dca', 'DCAR_013497' => 'dca', 'DCAR_014288' => 'dca', 'DCAR_014289' => 'dca', 'DCAR_014795' => 'dca', 'DCAR_017827' => 'dca', 'DCAR_020640' => 'dca', 'Dinv03539' => 'din', 'Dinv03541' => 'din', 'Dinv14565' => 'din', 'Dinv18589' => 'din', 'Dinv27378' => 'din', 'Dinv36545' => 'din', 'Dinv37029' => 'din', 'Dinv44181' => 'din', 'Duzib041G0012' => 'dzi', 'Duzib093G1979' => 'dzi', 'Duzib116G0574' => 'dzi', 'Duzib128G0676' => 'dzi', 'Duzib150G0417' => 'dzi', 'Duzib168G1010' => 'dzi', 'Duzib168G1935' => 'dzi', 'Duzib177G0020' => 'dzi', 'ECA232G3064' => 'eca', 'ECA236G2962' => 'eca', 'ECA240G1046' => 'eca', 'ECA248G0272' => 'eca', 'EL10Ac1g00033' => 'bvu', 'EL10Ac4g08779' => 'bvu', 'EL10Ac5g11675' => 'bvu', 'EL10Ac6g14816' => 'bvu', 'EL10Ac7g16234' => 'bvu', 'EL10Ac8g18618' => 'bvu', 'Eucgr.B03792' => 'egr', 'Eucgr.C01134' => 'egr', 'Eucgr.F03744' => 'egr', 'Eucgr.G02644' => 'egr', 'Eucgr.G02645' => 'egr', 'Eucgr.G02646' => 'egr', 'Eucgr.G02647' => 'egr', 'Eucgr.G02648' => 'egr', 'Eucgr.K01543' => 'egr', 'Eucgr.L01814' => 'egr', 'Eucgr.L01815' => 'egr', 'Eucgr.L02937' => 'egr', 'FAN04G1553' => 'fan', 'FAN08G0223' => 'fan', 'FAN11G0376' => 'fan', 'FAN13G1442' => 'fan', 'FAN16G3302' => 'fan', 'FAN18G4378' => 'fan', 'FAN19G0775' => 'fan', 'FAN19G2791' => 'fan', 'FAN23G0118' => 'fan', 'FAN23G2794' => 'fan', 'FAN25G0542' => 'fan', 'FAN26G2078' => 'fan', 'FAN26G2816' => 'fan', 'FAN28G2833' => 'fan', 'FvH4_1g03580' => 'fve', 'FvH4_1g29800' => 'fve', 'FvH4_3g27250' => 'fve', 'FvH4_5g39010' => 'fve', 'Glyma.03G006900' => 'gma', 'Glyma.05G008100' => 'gma', 'Glyma.06G109200' => 'gma', 'Glyma.06G109250' => 'gma', 'Glyma.08G228300' => 'gma', 'Glyma.13G084000' => 'gma', 'Glyma.14G164900' => 'gma', 'Glyma.14G165000' => 'gma', 'Glyma.15G220800' => 'gma', 'Glyma.17G116400' => 'gma', 'Glyma.19G119000' => 'gma', 'Glyma.20G057600' => 'gma', 'Gohir.A01G187900' => 'ghi', 'Gohir.A02G074700' => 'ghi', 'Gohir.A06G057300' => 'ghi', 'Gohir.A08G053050' => 'ghi', 'Gohir.A08G220900' => 'ghi', 'Gohir.A09G105000' => 'ghi', 'Gohir.A11G226400' => 'ghi', 'Gohir.A11G227100' => 'ghi', 'Gohir.D01G181700' => 'ghi', 'Gohir.D02G081700' => 'ghi', 'Gohir.D04G151650' => 'ghi', 'Gohir.D06G055600' => 'ghi', 'Gohir.D08G062600' => 'ghi', 'Gohir.D08G237500' => 'ghi', 'Gohir.D08G237600' => 'ghi', 'Gohir.D08G259950' => 'ghi', 'Gohir.D09G101700' => 'ghi', 'Gohir.D11G201566' => 'ghi', 'Gohir.D11G239400' => 'ghi', 'Gohir.D11G239450' => 'ghi', 'Gohir.D11G239500' => 'ghi', 'Gorai.002G220700' => 'gra', 'Gorai.004G064800' => 'gra', 'Gorai.004G253100' => 'gra', 'Gorai.004G277800' => 'gra', 'Gorai.005G091600' => 'gra', 'Gorai.006G119100' => 'gra', 'Gorai.007G252900' => 'gra', 'Gorai.007G253000' => 'gra', 'Gorai.007G253100' => 'gra', 'Gorai.010G064900' => 'gra', 'Gorai.012G138400' => 'gra', 'GSVIVG01008935001' => 'vvi', 'GSVIVG01015504001' => 'vvi', 'GSVIVG01027210001' => 'vvi', 'GSVIVG01029937001' => 'vvi', 'GSVIVG01037441001' => 'vvi', 'HanXRQChr04g0125521' => 'han', 'HanXRQChr06g0178121' => 'han', 'HanXRQChr09g0257821' => 'han', 'HanXRQChr12g0356351' => 'han', 'HanXRQChr12g0376121' => 'han', 'HanXRQChr13g0406471' => 'han', 'HanXRQChr15g0487461' => 'han', 'Haze_00518' => 'cav', 'Haze_03408' => 'cav', 'Haze_15953' => 'cav', 'Haze_15954' => 'cav', 'Haze_15955' => 'cav', 'Haze_20388' => 'cav', 'Haze_23637' => 'cav', 'Haze_27739' => 'cav', 'Hma1.2p1_0151F.1_g067440' => 'hma', 'Hma1.2p1_0188F.1_g082470' => 'hma', 'Hma1.2p1_0665F.1_g199140' => 'hma', 'Hma1.2p1_1544F.1_g289890' => 'hma', 'HPP92_000789' => 'vpl', 'HPP92_000811' => 'vpl', 'HPP92_005148' => 'vpl', 'HPP92_010974' => 'vpl', 'HPP92_010975' => 'vpl', 'Hund09143' => 'sun', 'Hund16825' => 'sun', 'Hund20977' => 'sun', 'Hund27052' => 'sun', 'Lalb_Chr07g0178811' => 'lal', 'Lalb_Chr08g0241671' => 'lal', 'Lalb_Chr12g0197821' => 'lal', 'Lalb_Chr14g0364971' => 'lal', 'Lalb_Chr19g0132521' => 'lal', 'Lalb_Chr22g0358461' => 'lal', 'Lj1C1069G3' => 'lonja', 'Lj1g0009233' => 'lja', 'Lj1g0019275' => 'lja', 'Lj2C908G4' => 'lonja', 'Lj3g0010071' => 'lja', 'Lj4A40T47' => 'lonja', 'Lj4C40T2' => 'lonja', 'Lj4g0001261' => 'lja', 'Lj7A494G41' => 'lonja', 'Lj7A494T47' => 'lonja', 'Lj7A632G43' => 'lonja', 'Lj7A632G44' => 'lonja', 'Lj7C216T0' => 'lonja', 'Lj7C308T0' => 'lonja', 'Lsat_1_v5_gn_2_95180' => 'lsa', 'Lsat_1_v5_gn_4_177141' => 'lsa', 'Lsat_1_v5_gn_4_23940' => 'lsa', 'Lsat_1_v5_gn_5_154461' => 'lsa', 'Lsat_1_v5_gn_5_97060' => 'lsa', 'Lsat_1_v5_gn_7_94901' => 'lsa', 'Lsat_1_v5_gn_8_106740' => 'lsa', 'Manes.04G055700' => 'mes', 'Manes.06G049900' => 'mes', 'Manes.09G135900' => 'mes', 'Manes.14G130700' => 'mes', 'Manes.18G073250' => 'mes', 'Manes.S076800' => 'mes', 'Mapoly0013s0176' => 'mpo', 'Mapoly0023s0052' => 'mpo', 'Mapoly0086s0054' => 'mpo', 'Mapoly0097s0074' => 'mpo', 'MBI03_g11129_MAGBIO' => 'mbi', 'MBI03_g11130_MAGBIO' => 'mbi', 'MBI03_g11150_MAGBIO' => 'mbi', 'MBI13_g41273_MAGBIO' => 'mbi', 'MBI19_g01934_MAGBIO' => 'mbi', 'MBI19_g34089_MAGBIO' => 'mbi', 'MCO01G186' => 'mco', 'MCO02G435' => 'mco', 'MCO04G054' => 'mco', 'MCO04G200' => 'mco', 'MCO12G322' => 'mco', 'MD00G1107200' => 'mdo', 'MD02G1035100' => 'mdo', 'MD08G1172400' => 'mdo', 'MD12G1013300' => 'mdo', 'MD14G1010800' => 'mdo', 'MD15G1357900' => 'mdo', 'Medtr3g073150' => 'mtr', 'Medtr3g073180' => 'mtr', 'Medtr3g079510' => 'mtr', 'Medtr3g479590' => 'mtr', 'Medtr4g113900' => 'mtr', 'Medtr4g114030' => 'mtr', 'Medtr5g059820' => 'mtr', 'Medtr7g087090' => 'mtr', 'Medtr8g044160' => 'mtr', 'MELO3C004519.2' => 'cme', 'MELO3C009710.2' => 'cme', 'MELO3C010444.2' => 'cme', 'MELO3C014713.2' => 'cme', 'MELO3C019165.2' => 'cme', 'MELO3C022772.2' => 'cme', 'Migut.C01185' => 'egut', 'Migut.J01170' => 'egut', 'Migut.J01171' => 'egut', 'Migut.J01536' => 'egut', 'Migut.K00216' => 'egut', 'MSTRG.10752' => 'ama', 'MSTRG.19606' => 'ama', 'MSTRG.19731' => 'ama', 'MSTRG.25413' => 'ama', 'MSTRG.26206' => 'ama', 'MSTRG.6252' => 'ama', 'Nitab4.5_0000613g0050' => 'nta', 'Nitab4.5_0001141g0010' => 'nta', 'Nitab4.5_0001438g0140' => 'nta', 'Nitab4.5_0001623g0020' => 'nta', 'Nitab4.5_0002857g0010' => 'nta', 'Nitab4.5_0003302g0080' => 'nta', 'Nitab4.5_0004148g0070' => 'nta', 'Nitab4.5_0004801g0060' => 'nta', 'Nitab4.5_0023821g0010' => 'nta', 'Nn1g08621' => 'nnu', 'Nn4g25004' => 'nnu', 'Nn5g28059' => 'nnu', 'Nn7g37933' => 'nnu', 'Nn8g39389' => 'nnu', 'Nn8g39580' => 'nnu', 'Oeu029774.2' => 'oeu', 'Oeu032948.1' => 'oeu', 'Oeu032949.1' => 'oeu', 'Oeu032964.2' => 'oeu', 'Oeu043787.1' => 'oeu', 'Oeu043957.1' => 'oeu', 'Oeu044205.1' => 'oeu', 'Oeu050263.1' => 'oeu', 'Oeu058057.2' => 'oeu', 'Oeu058063.1' => 'oeu', 'Os01g0174300' => 'osa', 'Os01g0814900' => 'osa', 'Os02g0770800' => 'osa', 'Os05g0488900' => 'osa', 'Os08g0468100' => 'osa', 'Os08g0468700' => 'osa', 'Peaxi162Scf00004g00362' => 'pax', 'Peaxi162Scf00063g00121' => 'pax', 'Peaxi162Scf00343g00049' => 'pax', 'Peaxi162Scf00369g00064' => 'pax', 'Peaxi162Scf00369g00065' => 'pax', 'Peaxi162Scf00476g00046' => 'pax', 'Peaxi162Scf00476g00632' => 'pax', 'Peaxi162Scf00575g00039' => 'pax', 'Peaxi162Scf00958g00036' => 'pax', 'Peaxi162Scf00958g00037' => 'pax', 'Peaxi162Scf01400g00021' => 'pax', 'PGR042G3238' => 'pgr', 'PGR044G1193' => 'pgr', 'PGR102G2134' => 'pgr', 'PGR102G3364' => 'pgr', 'PGR142G1426' => 'pgr', 'PGR142G2734' => 'pgr', 'PGSC0003DMG400028214' => 'stu', 'PGSC0003DMG400030212' => 'stu', 'Phvul.001G107300' => 'pvu', 'Phvul.003G162900' => 'pvu', 'Phvul.008G168000' => 'pvu', 'Phvul.009G121000' => 'pvu', 'Phvul.011G187800' => 'pvu', 'Potri.002G088600' => 'ptr', 'Potri.004G194400' => 'ptr', 'Potri.005G172400' => 'ptr', 'Potri.006G218600' => 'ptr', 'Potri.007G072750' => 'ptr', 'Potri.009G157000' => 'ptr', 'Potri.010G246800' => 'ptr', 'Potri.013G067300' => 'ptr', 'Potri.015G068500' => 'ptr', 'Pp3c10_9540' => 'ppa', 'Pp3c10_9670' => 'ppa', 'Pp3c14_9410' => 'ppa', 'Pp3c1_15390' => 'ppa', 'Pp3c2_21100' => 'ppa', 'Pp3c4_18080' => 'ppa', 'Pp3c6_18860' => 'ppa', 'PRCOL_00000542' => 'pco', 'PRCOL_00001335' => 'pco', 'PRCOL_00003047' => 'pco', 'PRCOL_00004551' => 'pco', 'PRCOL_00004594' => 'pco', 'PRCOL_00005404' => 'pco', 'Prupe.1G505400' => 'ppe', 'Prupe.6G154300' => 'ppe', 'Prupe.7G017700' => 'ppe', 'Prupe.7G239800' => 'ppe', 'Psat0s3059g0080' => 'psa', 'Psat2g077040' => 'psa', 'Psat3g085480' => 'psa', 'Psat4g040440' => 'psa', 'Psat5g112400' => 'psa', 'Psat5g134440' => 'psa', 'PSO170G4324' => 'pso', 'PSO170G5562' => 'pso', 'PSO339G0893' => 'pso', 'PSO384G4743' => 'pso', 'PSO455G0024' => 'pso', 'PSO455G0205' => 'pso', 'PSO528G0278' => 'pso', 'QL01p020512' => 'qlo', 'QL02p087833' => 'qlo', 'QL04p050355' => 'qlo', 'QL04p050360' => 'qlo', 'QL04p050375' => 'qlo', 'QL07p016696' => 'qlo', 'QL09p037275' => 'qlo', 'RcHm_v2.0_Chr1g0371001' => 'rch', 'RcHm_v2.0_Chr2g0089111' => 'rch', 'RcHm_v2.0_Chr3g0485111' => 'rch', 'RcHm_v2.0_Chr3g0495881' => 'rch', 'RcHm_v2.0_Chr5g0049861' => 'rch', 'RcHm_v2.0_Chr7g0240971' => 'rch', 'Rhsim01G0076500' => 'rsi', 'Rhsim03G0046200' => 'rsi', 'Rhsim06G0108700' => 'rsi', 'Rhsim06G0108800' => 'rsi', 'Rhsim08G0072000' => 'rsi', 'Rhsim08G0072100' => 'rsi', 'Rhsim13G0200400' => 'rsi', 'Sabra02G0069800' => 'sbr', 'Sabra05G0130000' => 'sbr', 'Sabra06G0168500' => 'sbr', 'Sabra09G0122800' => 'sbr', 'Sabra10G0192300' => 'sbr', 'Sabra13G0058700' => 'sbr', 'SalBow7G1618' => 'sbo', 'SalBow7G4024' => 'sbo', 'Sc01g0001500' => 'sci', 'Sc07g0007650' => 'sci', 'Sc18g0000690' => 'sci', 'Sed0004027' => 'sed', 'Sed0004439' => 'sed', 'Sed0010585' => 'sed', 'Sed0014084' => 'sed', 'Sed0017233' => 'sed', 'Sed0018365' => 'sed', 'Sed0022627' => 'sed', 'Sed0025281' => 'sed', 'SEGI_07411' => 'sgi', 'SEGI_18220' => 'sgi', 'SEGI_20596' => 'sgi', 'SGA_v2.0_scaffold17G07978' => 'sas', 'SGA_v2.0_scaffold229G43326' => 'sas', 'SGA_v2.0_scaffold45G17070' => 'sas', 'SGA_v2.0_scaffold52G19019' => 'sas', 'SGA_v2.0_scaffold66G22378' => 'sas', 'SGA_v2.0_scaffold69G23220' => 'sas', 'SHI14863' => 'shi', 'SHI14864' => 'shi', 'SMO134G0168' => 'smo', 'SMO331G0069' => 'smo', 'Solyc05g018520.3' => 'sly', 'Solyc10g081440.2' => 'sly', 'Solyc11g013810.3' => 'sly', 'Sopen05g015640' => 'spe', 'Sopen10g031940' => 'spe', 'Sopen11g008740' => 'spe', 'Sp1g31260' => 'spa', 'Sp5g32930' => 'spa', 'Sp6g24330' => 'spa', 'Sp6g26480' => 'spa', 'TAR623G0776' => 'tar', 'TAR624G1222' => 'tar', 'TAR625G0129' => 'tar', 'TAR628G1493' => 'tar', 'TAR633G2746' => 'tar', 'TAR636G0812' => 'tar', 'THA.LOC104798845' => 'tha', 'THA.LOC104799648' => 'tha', 'THA.LOC104813138' => 'tha', 'THA.LOC104813644' => 'tha', 'THA.LOC104817024' => 'tha', 'THA.LOC104820801' => 'tha', 'Thecc.05G239600' => 'tca', 'Thecc.08G117500' => 'tca', 'Thecc.09G123300' => 'tca', 'Thecc.09G263700' => 'tca', 'Thhalv10003628m.g' => 'esa', 'Thhalv10014199m.g' => 'esa', 'Thhalv10014327m.g' => 'esa', 'Thhalv10018092m.g' => 'esa', 'TPR.G32932' => 'tpr', 'TPR.G32938' => 'tpr', 'TPR.G32951' => 'tpr', 'TPR.G35748' => 'tpr', 'TPR.G37984' => 'tpr', 'TPR.G7839' => 'tpr', 'TPR.G8508' => 'tpr', 'TWI32G0011' => 'twi', 'TWI34G0260' => 'twi', 'TWI56G0099' => 'twi', 'TWI60G0536' => 'twi', 'TWI63G0382' => 'twi', 'TWI79G0752' => 'twi', 'unitig_21.g20659' => 'ugi', 'unitig_699.g19212' => 'ugi', 'unitig_744.g23958' => 'ugi', 'vmacro04069' => 'vma', 'vmacro04070' => 'vma', 'vmacro07640' => 'vma', 'vmacro12531' => 'vma', 'vmacro20489' => 'vma', 'vmacro20598' => 'vma', 'VMungo0647G0621' => 'vmu', 'VMungo1127G1753' => 'vmu', 'VMungo1215G2224' => 'vmu', 'VMungo1309G2713' => 'vmu', 'VMungo1383G1796' => 'vmu', 'Zm00001eb037860' => 'zma', 'Zm00001eb082240' => 'zma', 'Zm00001eb122720' => 'zma', 'Zm00001eb149860' => 'zma', 'Zm00001eb152720' => 'zma', 'Zm00001eb176470' => 'zma', 'Zm00001eb193390' => 'zma', 'Zm00001eb209630' => 'zma', 'Zm00001eb213470' => 'zma', 'Zm00001eb245550' => 'zma', 'Zm00001eb256260' => 'zma', 'Zm00001eb291160' => 'zma', 'Zm00001eb346170' => 'zma', 'Zm00001eb390110' => 'zma', 'Zm00001eb425210' => 'zma', 'Zm00001eb429490' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D000951', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000951' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D000951', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '631', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000951' ) ), 'genes' => array( 'A02p04440' => 'bna', 'A02p21820' => 'bna', 'A02p21830' => 'bna', 'A03p08480' => 'bna', 'A07p15250' => 'bna', 'A07p27850' => 'bna', 'A07p43060' => 'bna', 'A10p21680' => 'bna', 'Aa31LG11G11810' => 'aar', 'Aa31LG4G7870' => 'aar', 'Aa31LG6G8050' => 'aar', 'Aa31LG6G9110' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.2307' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3621' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5248' => 'aag', 'Actinidia02592' => 'ach', 'Actinidia18376' => 'ach', 'Actinidia22002' => 'ach', 'Actinidia37832' => 'ach', 'Ah.05g172520' => 'amhyb', 'Ah.05g172530' => 'amhyb', 'Ah.06g191190' => 'amhyb', 'Ah.12g061950' => 'amhyb', 'Ah.15g099310' => 'amhyb', 'Ah.16g110180' => 'amhyb', 'AL1G51170' => 'aly', 'AL2G37990' => 'aly', 'AL6G28860' => 'aly', 'AL6G31630' => 'aly', 'Aqoxy1G00099' => 'aox', 'Aqoxy1G04088' => 'aox', 'Aqoxy6G00153' => 'aox', 'Aqoxy7G02098' => 'aox', 'Aqoxy7G02149' => 'aox', 'arahy.Tifrunner.gnm1.ann1.34G2NL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L21K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B1DGRD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B2KMHD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FIU44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9J1TW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y57IDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YZT8QC' => 'arhy', 'AT1G37130' => 'ath', 'AT1G77760' => 'ath', 'AT5G17770' => 'ath', 'AT5G20080' => 'ath', 'ATR0068G079' => 'atr', 'ATR0684G206' => 'atr', 'ATR1156G037' => 'atr', 'Atru.chr13.1323' => 'acertr', 'Atru.chr13.1367' => 'acertr', 'Atru.chr2.1564' => 'acertr', 'Atru.chr3.2915' => 'acertr', 'Atru.chr7.1199' => 'acertr', 'Atru.chr8.893' => 'acertr', 'Atru.chr8.894' => 'acertr', 'AUR62001601' => 'cqu', 'AUR62004699' => 'cqu', 'AUR62011088' => 'cqu', 'AUR62011089' => 'cqu', 'AUR62011110' => 'cqu', 'AUR62011111' => 'cqu', 'AUR62020178' => 'cqu', 'AUR62023616' => 'cqu', 'AUR62033478' => 'cqu', 'AUR62036515' => 'cqu', 'AUR62037059' => 'cqu', 'BcaB01g04810' => 'bca', 'BcaB01g04911' => 'bca', 'BcaB01g05154' => 'bca', 'BcaB02g07129' => 'bca', 'BcaB03g15925' => 'bca', 'BcaB05g23276' => 'bca', 'BcaB05g25075' => 'bca', 'BcaB08g36746' => 'bca', 'BcaC03g13542' => 'bca', 'BcaC03g15090' => 'bca', 'BcaC03g15770' => 'bca', 'BcaC08g45455' => 'bca', 'BolC2t06841H' => 'bol', 'BolC2t07884H' => 'bol', 'BolC2t08722H' => 'bol', 'BolC2t09525H' => 'bol', 'BolC3t13476H' => 'bol', 'BolC6t35954H' => 'bol', 'BolC6t38246H' => 'bol', 'BolC6t40193H' => 'bol', 'BraA02t05408Z' => 'bra', 'BraA02t07185Z' => 'bra', 'BraA03t10171Z' => 'bra', 'BraA07t30424Z' => 'bra', 'BraA07t31827Z' => 'bra', 'C02p09340' => 'bna', 'C02p26490' => 'bna', 'C02p35110' => 'bna', 'C03p09880' => 'bna', 'C06p30820' => 'bna', 'C06p51710' => 'bna', 'C09p66260' => 'bna', 'CAN.G128.141' => 'can', 'CAN.G372.2' => 'can', 'CAN.G44.5' => 'can', 'CAN.G935.7' => 'can', 'CANSAT11G2446' => 'cansat', 'CANSAT25G1717' => 'cansat', 'CANSAT78G1357' => 'cansat', 'CARHR034720' => 'chi', 'CARHR071270' => 'chi', 'CARHR192750' => 'chi', 'CARHR195400' => 'chi', 'Carub.0001s3407' => 'cru', 'Carub.0002s2466' => 'cru', 'Carub.0006s1600' => 'cru', 'Carub.0006s1846' => 'cru', 'Ca_03444_v3' => 'car', 'Ca_12170_v3' => 'car', 'Ca_12848_v3' => 'car', 'Ca_15220_v3' => 'car', 'Ca_16254_v3' => 'car', 'Ca_21695_v3' => 'car', 'CBR_g36815' => 'cbr', 'CBR_g36817' => 'cbr', 'CBR_g4013' => 'cbr', 'CBR_g45637' => 'cbr', 'CBR_g46196' => 'cbr', 'CBR_g46198' => 'cbr', 'CBR_g46200' => 'cbr', 'CBR_g46898' => 'cbr', 'Cc00_g12040' => 'ccan', 'Cc06_g08770' => 'ccan', 'Cc06_g21550' => 'ccan', 'Cc10_g14390' => 'ccan', 'CDE02G2349' => 'cde', 'CDE04G2035' => 'cde', 'CDE06G0176' => 'cde', 'CDE06G2658' => 'cde', 'Cfa010247' => 'cfa', 'Cfa010454' => 'cfa', 'Cfa015964' => 'cfa', 'Cfa019869' => 'cfa', 'Cfa022855' => 'cfa', 'Cfa025215' => 'cfa', 'Cfa026789' => 'cfa', 'Cfa026899' => 'cfa', 'Cfa027359' => 'cfa', 'Ciclev10000220m.g' => 'ccl', 'Ciclev10008900m.g' => 'ccl', 'Ciclev10018119m.g' => 'ccl', 'Ciclev10018210m.g' => 'ccl', 'Ciclev10032349m.g' => 'ccl', 'CiPaw.03G242000' => 'cil', 'CiPaw.05G228100' => 'cil', 'CiPaw.06G025400' => 'cil', 'CiPaw.09G165700' => 'cil', 'CiPaw.13G047000' => 'cil', 'CiPaw.13G127400' => 'cil', 'ClCG02G024270' => 'cla', 'ClCG03G009280' => 'cla', 'ClCG03G009290' => 'cla', 'ClCG04G005060' => 'cla', 'ClCG10G016650' => 'cla', 'ClCG11G002910' => 'cla', 'ClCG11G015520' => 'cla', 'COL.COLO4_05763' => 'col', 'COL.COLO4_06727' => 'col', 'COL.COLO4_25291' => 'col', 'COL.COLO4_32799' => 'col', 'Cpa.g.c35493' => 'cpa', 'Cpa.g.sc49.137' => 'cpa', 'Cpa.g.sc73.10' => 'cpa', 'Cre03.g145547' => 'cre', 'Cre06.g303050' => 'cre', 'Cre09.g410950' => 'cre', 'Cre11.g481126' => 'cre', 'CsaV3_2G002740' => 'csa', 'CsaV3_2G026760' => 'csa', 'CsaV3_2G026770' => 'csa', 'CsaV3_2G026780' => 'csa', 'CsaV3_3G039690' => 'csa', 'CsaV3_4G017410' => 'csa', 'CsaV3_4G028560' => 'csa', 'CsaV3_4G029030' => 'csa', 'CsaV3_5G023350' => 'csa', 'CsaV3_5G023360' => 'csa', 'CsaV3_5G023370' => 'csa', 'CSS0016952' => 'camsi', 'CSS0027199' => 'camsi', 'CSS0031990' => 'camsi', 'CSS0033298' => 'camsi', 'CSS0047384' => 'camsi', 'CSS0049606' => 'camsi', 'DCAR_000386' => 'dca', 'DCAR_009200' => 'dca', 'DCAR_013497' => 'dca', 'DCAR_014288' => 'dca', 'DCAR_014289' => 'dca', 'DCAR_014795' => 'dca', 'DCAR_017827' => 'dca', 'DCAR_020640' => 'dca', 'Dinv03539' => 'din', 'Dinv03541' => 'din', 'Dinv14565' => 'din', 'Dinv18589' => 'din', 'Dinv27378' => 'din', 'Dinv36545' => 'din', 'Dinv37029' => 'din', 'Dinv44181' => 'din', 'Duzib041G0012' => 'dzi', 'Duzib093G1979' => 'dzi', 'Duzib116G0574' => 'dzi', 'Duzib128G0676' => 'dzi', 'Duzib150G0417' => 'dzi', 'Duzib168G1010' => 'dzi', 'Duzib168G1935' => 'dzi', 'Duzib177G0020' => 'dzi', 'ECA232G3064' => 'eca', 'ECA236G2962' => 'eca', 'ECA240G1046' => 'eca', 'ECA248G0272' => 'eca', 'EL10Ac1g00033' => 'bvu', 'EL10Ac4g08779' => 'bvu', 'EL10Ac5g11675' => 'bvu', 'EL10Ac6g14816' => 'bvu', 'EL10Ac7g16234' => 'bvu', 'EL10Ac8g18618' => 'bvu', 'Eucgr.B03792' => 'egr', 'Eucgr.C01134' => 'egr', 'Eucgr.F03744' => 'egr', 'Eucgr.G02644' => 'egr', 'Eucgr.G02645' => 'egr', 'Eucgr.G02646' => 'egr', 'Eucgr.G02647' => 'egr', 'Eucgr.G02648' => 'egr', 'Eucgr.K01543' => 'egr', 'Eucgr.L01814' => 'egr', 'Eucgr.L01815' => 'egr', 'Eucgr.L02937' => 'egr', 'FAN04G1553' => 'fan', 'FAN08G0223' => 'fan', 'FAN11G0376' => 'fan', 'FAN13G1442' => 'fan', 'FAN16G3302' => 'fan', 'FAN18G4378' => 'fan', 'FAN19G0775' => 'fan', 'FAN19G2791' => 'fan', 'FAN23G0118' => 'fan', 'FAN23G2794' => 'fan', 'FAN25G0542' => 'fan', 'FAN26G2078' => 'fan', 'FAN26G2816' => 'fan', 'FAN28G2833' => 'fan', 'FvH4_1g03580' => 'fve', 'FvH4_1g29800' => 'fve', 'FvH4_3g27250' => 'fve', 'FvH4_5g39010' => 'fve', 'Glyma.03G006900' => 'gma', 'Glyma.05G008100' => 'gma', 'Glyma.06G109200' => 'gma', 'Glyma.06G109250' => 'gma', 'Glyma.08G228300' => 'gma', 'Glyma.13G084000' => 'gma', 'Glyma.14G164900' => 'gma', 'Glyma.14G165000' => 'gma', 'Glyma.15G220800' => 'gma', 'Glyma.17G116400' => 'gma', 'Glyma.19G119000' => 'gma', 'Glyma.20G057600' => 'gma', 'Gohir.A01G187900' => 'ghi', 'Gohir.A02G074700' => 'ghi', 'Gohir.A06G057300' => 'ghi', 'Gohir.A08G053050' => 'ghi', 'Gohir.A08G220900' => 'ghi', 'Gohir.A09G105000' => 'ghi', 'Gohir.A11G226400' => 'ghi', 'Gohir.A11G227100' => 'ghi', 'Gohir.D01G181700' => 'ghi', 'Gohir.D02G081700' => 'ghi', 'Gohir.D04G151650' => 'ghi', 'Gohir.D06G055600' => 'ghi', 'Gohir.D08G062600' => 'ghi', 'Gohir.D08G237500' => 'ghi', 'Gohir.D08G237600' => 'ghi', 'Gohir.D08G259950' => 'ghi', 'Gohir.D09G101700' => 'ghi', 'Gohir.D11G201566' => 'ghi', 'Gohir.D11G239400' => 'ghi', 'Gohir.D11G239450' => 'ghi', 'Gohir.D11G239500' => 'ghi', 'Gorai.002G220700' => 'gra', 'Gorai.004G064800' => 'gra', 'Gorai.004G253100' => 'gra', 'Gorai.004G277800' => 'gra', 'Gorai.005G091600' => 'gra', 'Gorai.006G119100' => 'gra', 'Gorai.007G252900' => 'gra', 'Gorai.007G253000' => 'gra', 'Gorai.007G253100' => 'gra', 'Gorai.010G064900' => 'gra', 'Gorai.012G138400' => 'gra', 'GSVIVG01008935001' => 'vvi', 'GSVIVG01015504001' => 'vvi', 'GSVIVG01027210001' => 'vvi', 'GSVIVG01029937001' => 'vvi', 'GSVIVG01037441001' => 'vvi', 'HanXRQChr04g0125521' => 'han', 'HanXRQChr06g0178121' => 'han', 'HanXRQChr09g0257821' => 'han', 'HanXRQChr12g0356351' => 'han', 'HanXRQChr12g0376121' => 'han', 'HanXRQChr13g0406471' => 'han', 'HanXRQChr15g0487461' => 'han', 'Haze_00518' => 'cav', 'Haze_03408' => 'cav', 'Haze_15953' => 'cav', 'Haze_15954' => 'cav', 'Haze_15955' => 'cav', 'Haze_20388' => 'cav', 'Haze_23637' => 'cav', 'Haze_27739' => 'cav', 'Hma1.2p1_0151F.1_g067440' => 'hma', 'Hma1.2p1_0188F.1_g082470' => 'hma', 'Hma1.2p1_0665F.1_g199140' => 'hma', 'Hma1.2p1_1544F.1_g289890' => 'hma', 'HPP92_000789' => 'vpl', 'HPP92_000811' => 'vpl', 'HPP92_005148' => 'vpl', 'HPP92_010974' => 'vpl', 'HPP92_010975' => 'vpl', 'Hund09143' => 'sun', 'Hund16825' => 'sun', 'Hund20977' => 'sun', 'Hund27052' => 'sun', 'Lalb_Chr07g0178811' => 'lal', 'Lalb_Chr08g0241671' => 'lal', 'Lalb_Chr12g0197821' => 'lal', 'Lalb_Chr14g0364971' => 'lal', 'Lalb_Chr19g0132521' => 'lal', 'Lalb_Chr22g0358461' => 'lal', 'Lj1C1069G3' => 'lonja', 'Lj1g0009233' => 'lja', 'Lj1g0019275' => 'lja', 'Lj2C908G4' => 'lonja', 'Lj3g0010071' => 'lja', 'Lj4A40T47' => 'lonja', 'Lj4C40T2' => 'lonja', 'Lj4g0001261' => 'lja', 'Lj7A494G41' => 'lonja', 'Lj7A494T47' => 'lonja', 'Lj7A632G43' => 'lonja', 'Lj7A632G44' => 'lonja', 'Lj7C216T0' => 'lonja', 'Lj7C308T0' => 'lonja', 'Lsat_1_v5_gn_2_95180' => 'lsa', 'Lsat_1_v5_gn_4_177141' => 'lsa', 'Lsat_1_v5_gn_4_23940' => 'lsa', 'Lsat_1_v5_gn_5_154461' => 'lsa', 'Lsat_1_v5_gn_5_97060' => 'lsa', 'Lsat_1_v5_gn_7_94901' => 'lsa', 'Lsat_1_v5_gn_8_106740' => 'lsa', 'Manes.04G055700' => 'mes', 'Manes.06G049900' => 'mes', 'Manes.09G135900' => 'mes', 'Manes.14G130700' => 'mes', 'Manes.18G073250' => 'mes', 'Manes.S076800' => 'mes', 'Mapoly0013s0176' => 'mpo', 'Mapoly0023s0052' => 'mpo', 'Mapoly0086s0054' => 'mpo', 'Mapoly0097s0074' => 'mpo', 'MBI03_g11129_MAGBIO' => 'mbi', 'MBI03_g11130_MAGBIO' => 'mbi', 'MBI03_g11150_MAGBIO' => 'mbi', 'MBI13_g41273_MAGBIO' => 'mbi', 'MBI19_g01934_MAGBIO' => 'mbi', 'MBI19_g34089_MAGBIO' => 'mbi', 'MCO01G186' => 'mco', 'MCO02G435' => 'mco', 'MCO04G054' => 'mco', 'MCO04G200' => 'mco', 'MCO12G322' => 'mco', 'MD00G1107200' => 'mdo', 'MD02G1035100' => 'mdo', 'MD08G1172400' => 'mdo', 'MD12G1013300' => 'mdo', 'MD14G1010800' => 'mdo', 'MD15G1357900' => 'mdo', 'Medtr3g073150' => 'mtr', 'Medtr3g073180' => 'mtr', 'Medtr3g079510' => 'mtr', 'Medtr3g479590' => 'mtr', 'Medtr4g113900' => 'mtr', 'Medtr4g114030' => 'mtr', 'Medtr5g059820' => 'mtr', 'Medtr7g087090' => 'mtr', 'Medtr8g044160' => 'mtr', 'MELO3C004519.2' => 'cme', 'MELO3C009710.2' => 'cme', 'MELO3C010444.2' => 'cme', 'MELO3C014713.2' => 'cme', 'MELO3C019165.2' => 'cme', 'MELO3C022772.2' => 'cme', 'Migut.C01185' => 'egut', 'Migut.J01170' => 'egut', 'Migut.J01171' => 'egut', 'Migut.J01536' => 'egut', 'Migut.K00216' => 'egut', 'MSTRG.10752' => 'ama', 'MSTRG.19606' => 'ama', 'MSTRG.19731' => 'ama', 'MSTRG.25413' => 'ama', 'MSTRG.26206' => 'ama', 'MSTRG.6252' => 'ama', 'Nitab4.5_0000613g0050' => 'nta', 'Nitab4.5_0001141g0010' => 'nta', 'Nitab4.5_0001438g0140' => 'nta', 'Nitab4.5_0001623g0020' => 'nta', 'Nitab4.5_0002857g0010' => 'nta', 'Nitab4.5_0003302g0080' => 'nta', 'Nitab4.5_0004148g0070' => 'nta', 'Nitab4.5_0004801g0060' => 'nta', 'Nitab4.5_0023821g0010' => 'nta', 'Nn1g08621' => 'nnu', 'Nn4g25004' => 'nnu', 'Nn5g28059' => 'nnu', 'Nn7g37933' => 'nnu', 'Nn8g39389' => 'nnu', 'Nn8g39580' => 'nnu', 'Oeu029774.2' => 'oeu', 'Oeu032948.1' => 'oeu', 'Oeu032949.1' => 'oeu', 'Oeu032964.2' => 'oeu', 'Oeu043787.1' => 'oeu', 'Oeu043957.1' => 'oeu', 'Oeu044205.1' => 'oeu', 'Oeu050263.1' => 'oeu', 'Oeu058057.2' => 'oeu', 'Oeu058063.1' => 'oeu', 'Os01g0174300' => 'osa', 'Os01g0814900' => 'osa', 'Os02g0770800' => 'osa', 'Os05g0488900' => 'osa', 'Os08g0468100' => 'osa', 'Os08g0468700' => 'osa', 'Peaxi162Scf00004g00362' => 'pax', 'Peaxi162Scf00063g00121' => 'pax', 'Peaxi162Scf00343g00049' => 'pax', 'Peaxi162Scf00369g00064' => 'pax', 'Peaxi162Scf00369g00065' => 'pax', 'Peaxi162Scf00476g00046' => 'pax', 'Peaxi162Scf00476g00632' => 'pax', 'Peaxi162Scf00575g00039' => 'pax', 'Peaxi162Scf00958g00036' => 'pax', 'Peaxi162Scf00958g00037' => 'pax', 'Peaxi162Scf01400g00021' => 'pax', 'PGR042G3238' => 'pgr', 'PGR044G1193' => 'pgr', 'PGR102G2134' => 'pgr', 'PGR102G3364' => 'pgr', 'PGR142G1426' => 'pgr', 'PGR142G2734' => 'pgr', 'PGSC0003DMG400028214' => 'stu', 'PGSC0003DMG400030212' => 'stu', 'Phvul.001G107300' => 'pvu', 'Phvul.003G162900' => 'pvu', 'Phvul.008G168000' => 'pvu', 'Phvul.009G121000' => 'pvu', 'Phvul.011G187800' => 'pvu', 'Potri.002G088600' => 'ptr', 'Potri.004G194400' => 'ptr', 'Potri.005G172400' => 'ptr', 'Potri.006G218600' => 'ptr', 'Potri.007G072750' => 'ptr', 'Potri.009G157000' => 'ptr', 'Potri.010G246800' => 'ptr', 'Potri.013G067300' => 'ptr', 'Potri.015G068500' => 'ptr', 'Pp3c10_9540' => 'ppa', 'Pp3c10_9670' => 'ppa', 'Pp3c14_9410' => 'ppa', 'Pp3c1_15390' => 'ppa', 'Pp3c2_21100' => 'ppa', 'Pp3c4_18080' => 'ppa', 'Pp3c6_18860' => 'ppa', 'PRCOL_00000542' => 'pco', 'PRCOL_00001335' => 'pco', 'PRCOL_00003047' => 'pco', 'PRCOL_00004551' => 'pco', 'PRCOL_00004594' => 'pco', 'PRCOL_00005404' => 'pco', 'Prupe.1G505400' => 'ppe', 'Prupe.6G154300' => 'ppe', 'Prupe.7G017700' => 'ppe', 'Prupe.7G239800' => 'ppe', 'Psat0s3059g0080' => 'psa', 'Psat2g077040' => 'psa', 'Psat3g085480' => 'psa', 'Psat4g040440' => 'psa', 'Psat5g112400' => 'psa', 'Psat5g134440' => 'psa', 'PSO170G4324' => 'pso', 'PSO170G5562' => 'pso', 'PSO339G0893' => 'pso', 'PSO384G4743' => 'pso', 'PSO455G0024' => 'pso', 'PSO455G0205' => 'pso', 'PSO528G0278' => 'pso', 'QL01p020512' => 'qlo', 'QL02p087833' => 'qlo', 'QL04p050355' => 'qlo', 'QL04p050360' => 'qlo', 'QL04p050375' => 'qlo', 'QL07p016696' => 'qlo', 'QL09p037275' => 'qlo', 'RcHm_v2.0_Chr1g0371001' => 'rch', 'RcHm_v2.0_Chr2g0089111' => 'rch', 'RcHm_v2.0_Chr3g0485111' => 'rch', 'RcHm_v2.0_Chr3g0495881' => 'rch', 'RcHm_v2.0_Chr5g0049861' => 'rch', 'RcHm_v2.0_Chr7g0240971' => 'rch', 'Rhsim01G0076500' => 'rsi', 'Rhsim03G0046200' => 'rsi', 'Rhsim06G0108700' => 'rsi', 'Rhsim06G0108800' => 'rsi', 'Rhsim08G0072000' => 'rsi', 'Rhsim08G0072100' => 'rsi', 'Rhsim13G0200400' => 'rsi', 'Sabra02G0069800' => 'sbr', 'Sabra05G0130000' => 'sbr', 'Sabra06G0168500' => 'sbr', 'Sabra09G0122800' => 'sbr', 'Sabra10G0192300' => 'sbr', 'Sabra13G0058700' => 'sbr', 'SalBow7G1618' => 'sbo', 'SalBow7G4024' => 'sbo', 'Sc01g0001500' => 'sci', 'Sc07g0007650' => 'sci', 'Sc18g0000690' => 'sci', 'Sed0004027' => 'sed', 'Sed0004439' => 'sed', 'Sed0010585' => 'sed', 'Sed0014084' => 'sed', 'Sed0017233' => 'sed', 'Sed0018365' => 'sed', 'Sed0022627' => 'sed', 'Sed0025281' => 'sed', 'SEGI_07411' => 'sgi', 'SEGI_18220' => 'sgi', 'SEGI_20596' => 'sgi', 'SGA_v2.0_scaffold17G07978' => 'sas', 'SGA_v2.0_scaffold229G43326' => 'sas', 'SGA_v2.0_scaffold45G17070' => 'sas', 'SGA_v2.0_scaffold52G19019' => 'sas', 'SGA_v2.0_scaffold66G22378' => 'sas', 'SGA_v2.0_scaffold69G23220' => 'sas', 'SHI14863' => 'shi', 'SHI14864' => 'shi', 'SMO134G0168' => 'smo', 'SMO331G0069' => 'smo', 'Solyc05g018520.3' => 'sly', 'Solyc10g081440.2' => 'sly', 'Solyc11g013810.3' => 'sly', 'Sopen05g015640' => 'spe', 'Sopen10g031940' => 'spe', 'Sopen11g008740' => 'spe', 'Sp1g31260' => 'spa', 'Sp5g32930' => 'spa', 'Sp6g24330' => 'spa', 'Sp6g26480' => 'spa', 'TAR623G0776' => 'tar', 'TAR624G1222' => 'tar', 'TAR625G0129' => 'tar', 'TAR628G1493' => 'tar', 'TAR633G2746' => 'tar', 'TAR636G0812' => 'tar', 'THA.LOC104798845' => 'tha', 'THA.LOC104799648' => 'tha', 'THA.LOC104813138' => 'tha', 'THA.LOC104813644' => 'tha', 'THA.LOC104817024' => 'tha', 'THA.LOC104820801' => 'tha', 'Thecc.05G239600' => 'tca', 'Thecc.08G117500' => 'tca', 'Thecc.09G123300' => 'tca', 'Thecc.09G263700' => 'tca', 'Thhalv10003628m.g' => 'esa', 'Thhalv10014199m.g' => 'esa', 'Thhalv10014327m.g' => 'esa', 'Thhalv10018092m.g' => 'esa', 'TPR.G32932' => 'tpr', 'TPR.G32938' => 'tpr', 'TPR.G32951' => 'tpr', 'TPR.G35748' => 'tpr', 'TPR.G37984' => 'tpr', 'TPR.G7839' => 'tpr', 'TPR.G8508' => 'tpr', 'TWI32G0011' => 'twi', 'TWI34G0260' => 'twi', 'TWI56G0099' => 'twi', 'TWI60G0536' => 'twi', 'TWI63G0382' => 'twi', 'TWI79G0752' => 'twi', 'unitig_21.g20659' => 'ugi', 'unitig_699.g19212' => 'ugi', 'unitig_744.g23958' => 'ugi', 'vmacro04069' => 'vma', 'vmacro04070' => 'vma', 'vmacro07640' => 'vma', 'vmacro12531' => 'vma', 'vmacro20489' => 'vma', 'vmacro20598' => 'vma', 'VMungo0647G0621' => 'vmu', 'VMungo1127G1753' => 'vmu', 'VMungo1215G2224' => 'vmu', 'VMungo1309G2713' => 'vmu', 'VMungo1383G1796' => 'vmu', 'Zm00001eb037860' => 'zma', 'Zm00001eb082240' => 'zma', 'Zm00001eb122720' => 'zma', 'Zm00001eb149860' => 'zma', 'Zm00001eb152720' => 'zma', 'Zm00001eb176470' => 'zma', 'Zm00001eb193390' => 'zma', 'Zm00001eb209630' => 'zma', 'Zm00001eb213470' => 'zma', 'Zm00001eb245550' => 'zma', 'Zm00001eb256260' => 'zma', 'Zm00001eb291160' => 'zma', 'Zm00001eb346170' => 'zma', 'Zm00001eb390110' => 'zma', 'Zm00001eb425210' => 'zma', 'Zm00001eb429490' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D000951' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000951' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D000951' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000951' )
include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
Notice (8): Trying to access array offset on value of type null [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000951', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '631', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A02p04440' => 'bna', 'A02p21820' => 'bna', 'A02p21830' => 'bna', 'A03p08480' => 'bna', 'A07p15250' => 'bna', 'A07p27850' => 'bna', 'A07p43060' => 'bna', 'A10p21680' => 'bna', 'Aa31LG11G11810' => 'aar', 'Aa31LG4G7870' => 'aar', 'Aa31LG6G8050' => 'aar', 'Aa31LG6G9110' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.2307' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3621' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5248' => 'aag', 'Actinidia02592' => 'ach', 'Actinidia18376' => 'ach', 'Actinidia22002' => 'ach', 'Actinidia37832' => 'ach', 'Ah.05g172520' => 'amhyb', 'Ah.05g172530' => 'amhyb', 'Ah.06g191190' => 'amhyb', 'Ah.12g061950' => 'amhyb', 'Ah.15g099310' => 'amhyb', 'Ah.16g110180' => 'amhyb', 'AL1G51170' => 'aly', 'AL2G37990' => 'aly', 'AL6G28860' => 'aly', 'AL6G31630' => 'aly', 'Aqoxy1G00099' => 'aox', 'Aqoxy1G04088' => 'aox', 'Aqoxy6G00153' => 'aox', 'Aqoxy7G02098' => 'aox', 'Aqoxy7G02149' => 'aox', 'arahy.Tifrunner.gnm1.ann1.34G2NL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L21K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B1DGRD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B2KMHD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FIU44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9J1TW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y57IDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YZT8QC' => 'arhy', 'AT1G37130' => 'ath', 'AT1G77760' => 'ath', 'AT5G17770' => 'ath', 'AT5G20080' => 'ath', 'ATR0068G079' => 'atr', 'ATR0684G206' => 'atr', 'ATR1156G037' => 'atr', 'Atru.chr13.1323' => 'acertr', 'Atru.chr13.1367' => 'acertr', 'Atru.chr2.1564' => 'acertr', 'Atru.chr3.2915' => 'acertr', 'Atru.chr7.1199' => 'acertr', 'Atru.chr8.893' => 'acertr', 'Atru.chr8.894' => 'acertr', 'AUR62001601' => 'cqu', 'AUR62004699' => 'cqu', 'AUR62011088' => 'cqu', 'AUR62011089' => 'cqu', 'AUR62011110' => 'cqu', 'AUR62011111' => 'cqu', 'AUR62020178' => 'cqu', 'AUR62023616' => 'cqu', 'AUR62033478' => 'cqu', 'AUR62036515' => 'cqu', 'AUR62037059' => 'cqu', 'BcaB01g04810' => 'bca', 'BcaB01g04911' => 'bca', 'BcaB01g05154' => 'bca', 'BcaB02g07129' => 'bca', 'BcaB03g15925' => 'bca', 'BcaB05g23276' => 'bca', 'BcaB05g25075' => 'bca', 'BcaB08g36746' => 'bca', 'BcaC03g13542' => 'bca', 'BcaC03g15090' => 'bca', 'BcaC03g15770' => 'bca', 'BcaC08g45455' => 'bca', 'BolC2t06841H' => 'bol', 'BolC2t07884H' => 'bol', 'BolC2t08722H' => 'bol', 'BolC2t09525H' => 'bol', 'BolC3t13476H' => 'bol', 'BolC6t35954H' => 'bol', 'BolC6t38246H' => 'bol', 'BolC6t40193H' => 'bol', 'BraA02t05408Z' => 'bra', 'BraA02t07185Z' => 'bra', 'BraA03t10171Z' => 'bra', 'BraA07t30424Z' => 'bra', 'BraA07t31827Z' => 'bra', 'C02p09340' => 'bna', 'C02p26490' => 'bna', 'C02p35110' => 'bna', 'C03p09880' => 'bna', 'C06p30820' => 'bna', 'C06p51710' => 'bna', 'C09p66260' => 'bna', 'CAN.G128.141' => 'can', 'CAN.G372.2' => 'can', 'CAN.G44.5' => 'can', 'CAN.G935.7' => 'can', 'CANSAT11G2446' => 'cansat', 'CANSAT25G1717' => 'cansat', 'CANSAT78G1357' => 'cansat', 'CARHR034720' => 'chi', 'CARHR071270' => 'chi', 'CARHR192750' => 'chi', 'CARHR195400' => 'chi', 'Carub.0001s3407' => 'cru', 'Carub.0002s2466' => 'cru', 'Carub.0006s1600' => 'cru', 'Carub.0006s1846' => 'cru', 'Ca_03444_v3' => 'car', 'Ca_12170_v3' => 'car', 'Ca_12848_v3' => 'car', 'Ca_15220_v3' => 'car', 'Ca_16254_v3' => 'car', 'Ca_21695_v3' => 'car', 'CBR_g36815' => 'cbr', 'CBR_g36817' => 'cbr', 'CBR_g4013' => 'cbr', 'CBR_g45637' => 'cbr', 'CBR_g46196' => 'cbr', 'CBR_g46198' => 'cbr', 'CBR_g46200' => 'cbr', 'CBR_g46898' => 'cbr', 'Cc00_g12040' => 'ccan', 'Cc06_g08770' => 'ccan', 'Cc06_g21550' => 'ccan', 'Cc10_g14390' => 'ccan', 'CDE02G2349' => 'cde', 'CDE04G2035' => 'cde', 'CDE06G0176' => 'cde', 'CDE06G2658' => 'cde', 'Cfa010247' => 'cfa', 'Cfa010454' => 'cfa', 'Cfa015964' => 'cfa', 'Cfa019869' => 'cfa', 'Cfa022855' => 'cfa', 'Cfa025215' => 'cfa', 'Cfa026789' => 'cfa', 'Cfa026899' => 'cfa', 'Cfa027359' => 'cfa', 'Ciclev10000220m.g' => 'ccl', 'Ciclev10008900m.g' => 'ccl', 'Ciclev10018119m.g' => 'ccl', 'Ciclev10018210m.g' => 'ccl', 'Ciclev10032349m.g' => 'ccl', 'CiPaw.03G242000' => 'cil', 'CiPaw.05G228100' => 'cil', 'CiPaw.06G025400' => 'cil', 'CiPaw.09G165700' => 'cil', 'CiPaw.13G047000' => 'cil', 'CiPaw.13G127400' => 'cil', 'ClCG02G024270' => 'cla', 'ClCG03G009280' => 'cla', 'ClCG03G009290' => 'cla', 'ClCG04G005060' => 'cla', 'ClCG10G016650' => 'cla', 'ClCG11G002910' => 'cla', 'ClCG11G015520' => 'cla', 'COL.COLO4_05763' => 'col', 'COL.COLO4_06727' => 'col', 'COL.COLO4_25291' => 'col', 'COL.COLO4_32799' => 'col', 'Cpa.g.c35493' => 'cpa', 'Cpa.g.sc49.137' => 'cpa', 'Cpa.g.sc73.10' => 'cpa', 'Cre03.g145547' => 'cre', 'Cre06.g303050' => 'cre', 'Cre09.g410950' => 'cre', 'Cre11.g481126' => 'cre', 'CsaV3_2G002740' => 'csa', 'CsaV3_2G026760' => 'csa', 'CsaV3_2G026770' => 'csa', 'CsaV3_2G026780' => 'csa', 'CsaV3_3G039690' => 'csa', 'CsaV3_4G017410' => 'csa', 'CsaV3_4G028560' => 'csa', 'CsaV3_4G029030' => 'csa', 'CsaV3_5G023350' => 'csa', 'CsaV3_5G023360' => 'csa', 'CsaV3_5G023370' => 'csa', 'CSS0016952' => 'camsi', 'CSS0027199' => 'camsi', 'CSS0031990' => 'camsi', 'CSS0033298' => 'camsi', 'CSS0047384' => 'camsi', 'CSS0049606' => 'camsi', 'DCAR_000386' => 'dca', 'DCAR_009200' => 'dca', 'DCAR_013497' => 'dca', 'DCAR_014288' => 'dca', 'DCAR_014289' => 'dca', 'DCAR_014795' => 'dca', 'DCAR_017827' => 'dca', 'DCAR_020640' => 'dca', 'Dinv03539' => 'din', 'Dinv03541' => 'din', 'Dinv14565' => 'din', 'Dinv18589' => 'din', 'Dinv27378' => 'din', 'Dinv36545' => 'din', 'Dinv37029' => 'din', 'Dinv44181' => 'din', 'Duzib041G0012' => 'dzi', 'Duzib093G1979' => 'dzi', 'Duzib116G0574' => 'dzi', 'Duzib128G0676' => 'dzi', 'Duzib150G0417' => 'dzi', 'Duzib168G1010' => 'dzi', 'Duzib168G1935' => 'dzi', 'Duzib177G0020' => 'dzi', 'ECA232G3064' => 'eca', 'ECA236G2962' => 'eca', 'ECA240G1046' => 'eca', 'ECA248G0272' => 'eca', 'EL10Ac1g00033' => 'bvu', 'EL10Ac4g08779' => 'bvu', 'EL10Ac5g11675' => 'bvu', 'EL10Ac6g14816' => 'bvu', 'EL10Ac7g16234' => 'bvu', 'EL10Ac8g18618' => 'bvu', 'Eucgr.B03792' => 'egr', 'Eucgr.C01134' => 'egr', 'Eucgr.F03744' => 'egr', 'Eucgr.G02644' => 'egr', 'Eucgr.G02645' => 'egr', 'Eucgr.G02646' => 'egr', 'Eucgr.G02647' => 'egr', 'Eucgr.G02648' => 'egr', 'Eucgr.K01543' => 'egr', 'Eucgr.L01814' => 'egr', 'Eucgr.L01815' => 'egr', 'Eucgr.L02937' => 'egr', 'FAN04G1553' => 'fan', 'FAN08G0223' => 'fan', 'FAN11G0376' => 'fan', 'FAN13G1442' => 'fan', 'FAN16G3302' => 'fan', 'FAN18G4378' => 'fan', 'FAN19G0775' => 'fan', 'FAN19G2791' => 'fan', 'FAN23G0118' => 'fan', 'FAN23G2794' => 'fan', 'FAN25G0542' => 'fan', 'FAN26G2078' => 'fan', 'FAN26G2816' => 'fan', 'FAN28G2833' => 'fan', 'FvH4_1g03580' => 'fve', 'FvH4_1g29800' => 'fve', 'FvH4_3g27250' => 'fve', 'FvH4_5g39010' => 'fve', 'Glyma.03G006900' => 'gma', 'Glyma.05G008100' => 'gma', 'Glyma.06G109200' => 'gma', 'Glyma.06G109250' => 'gma', 'Glyma.08G228300' => 'gma', 'Glyma.13G084000' => 'gma', 'Glyma.14G164900' => 'gma', 'Glyma.14G165000' => 'gma', 'Glyma.15G220800' => 'gma', 'Glyma.17G116400' => 'gma', 'Glyma.19G119000' => 'gma', 'Glyma.20G057600' => 'gma', 'Gohir.A01G187900' => 'ghi', 'Gohir.A02G074700' => 'ghi', 'Gohir.A06G057300' => 'ghi', 'Gohir.A08G053050' => 'ghi', 'Gohir.A08G220900' => 'ghi', 'Gohir.A09G105000' => 'ghi', 'Gohir.A11G226400' => 'ghi', 'Gohir.A11G227100' => 'ghi', 'Gohir.D01G181700' => 'ghi', 'Gohir.D02G081700' => 'ghi', 'Gohir.D04G151650' => 'ghi', 'Gohir.D06G055600' => 'ghi', 'Gohir.D08G062600' => 'ghi', 'Gohir.D08G237500' => 'ghi', 'Gohir.D08G237600' => 'ghi', 'Gohir.D08G259950' => 'ghi', 'Gohir.D09G101700' => 'ghi', 'Gohir.D11G201566' => 'ghi', 'Gohir.D11G239400' => 'ghi', 'Gohir.D11G239450' => 'ghi', 'Gohir.D11G239500' => 'ghi', 'Gorai.002G220700' => 'gra', 'Gorai.004G064800' => 'gra', 'Gorai.004G253100' => 'gra', 'Gorai.004G277800' => 'gra', 'Gorai.005G091600' => 'gra', 'Gorai.006G119100' => 'gra', 'Gorai.007G252900' => 'gra', 'Gorai.007G253000' => 'gra', 'Gorai.007G253100' => 'gra', 'Gorai.010G064900' => 'gra', 'Gorai.012G138400' => 'gra', 'GSVIVG01008935001' => 'vvi', 'GSVIVG01015504001' => 'vvi', 'GSVIVG01027210001' => 'vvi', 'GSVIVG01029937001' => 'vvi', 'GSVIVG01037441001' => 'vvi', 'HanXRQChr04g0125521' => 'han', 'HanXRQChr06g0178121' => 'han', 'HanXRQChr09g0257821' => 'han', 'HanXRQChr12g0356351' => 'han', 'HanXRQChr12g0376121' => 'han', 'HanXRQChr13g0406471' => 'han', 'HanXRQChr15g0487461' => 'han', 'Haze_00518' => 'cav', 'Haze_03408' => 'cav', 'Haze_15953' => 'cav', 'Haze_15954' => 'cav', 'Haze_15955' => 'cav', 'Haze_20388' => 'cav', 'Haze_23637' => 'cav', 'Haze_27739' => 'cav', 'Hma1.2p1_0151F.1_g067440' => 'hma', 'Hma1.2p1_0188F.1_g082470' => 'hma', 'Hma1.2p1_0665F.1_g199140' => 'hma', 'Hma1.2p1_1544F.1_g289890' => 'hma', 'HPP92_000789' => 'vpl', 'HPP92_000811' => 'vpl', 'HPP92_005148' => 'vpl', 'HPP92_010974' => 'vpl', 'HPP92_010975' => 'vpl', 'Hund09143' => 'sun', 'Hund16825' => 'sun', 'Hund20977' => 'sun', 'Hund27052' => 'sun', 'Lalb_Chr07g0178811' => 'lal', 'Lalb_Chr08g0241671' => 'lal', 'Lalb_Chr12g0197821' => 'lal', 'Lalb_Chr14g0364971' => 'lal', 'Lalb_Chr19g0132521' => 'lal', 'Lalb_Chr22g0358461' => 'lal', 'Lj1C1069G3' => 'lonja', 'Lj1g0009233' => 'lja', 'Lj1g0019275' => 'lja', 'Lj2C908G4' => 'lonja', 'Lj3g0010071' => 'lja', 'Lj4A40T47' => 'lonja', 'Lj4C40T2' => 'lonja', 'Lj4g0001261' => 'lja', 'Lj7A494G41' => 'lonja', 'Lj7A494T47' => 'lonja', 'Lj7A632G43' => 'lonja', 'Lj7A632G44' => 'lonja', 'Lj7C216T0' => 'lonja', 'Lj7C308T0' => 'lonja', 'Lsat_1_v5_gn_2_95180' => 'lsa', 'Lsat_1_v5_gn_4_177141' => 'lsa', 'Lsat_1_v5_gn_4_23940' => 'lsa', 'Lsat_1_v5_gn_5_154461' => 'lsa', 'Lsat_1_v5_gn_5_97060' => 'lsa', 'Lsat_1_v5_gn_7_94901' => 'lsa', 'Lsat_1_v5_gn_8_106740' => 'lsa', 'Manes.04G055700' => 'mes', 'Manes.06G049900' => 'mes', 'Manes.09G135900' => 'mes', 'Manes.14G130700' => 'mes', 'Manes.18G073250' => 'mes', 'Manes.S076800' => 'mes', 'Mapoly0013s0176' => 'mpo', 'Mapoly0023s0052' => 'mpo', 'Mapoly0086s0054' => 'mpo', 'Mapoly0097s0074' => 'mpo', 'MBI03_g11129_MAGBIO' => 'mbi', 'MBI03_g11130_MAGBIO' => 'mbi', 'MBI03_g11150_MAGBIO' => 'mbi', 'MBI13_g41273_MAGBIO' => 'mbi', 'MBI19_g01934_MAGBIO' => 'mbi', 'MBI19_g34089_MAGBIO' => 'mbi', 'MCO01G186' => 'mco', 'MCO02G435' => 'mco', 'MCO04G054' => 'mco', 'MCO04G200' => 'mco', 'MCO12G322' => 'mco', 'MD00G1107200' => 'mdo', 'MD02G1035100' => 'mdo', 'MD08G1172400' => 'mdo', 'MD12G1013300' => 'mdo', 'MD14G1010800' => 'mdo', 'MD15G1357900' => 'mdo', 'Medtr3g073150' => 'mtr', 'Medtr3g073180' => 'mtr', 'Medtr3g079510' => 'mtr', 'Medtr3g479590' => 'mtr', 'Medtr4g113900' => 'mtr', 'Medtr4g114030' => 'mtr', 'Medtr5g059820' => 'mtr', 'Medtr7g087090' => 'mtr', 'Medtr8g044160' => 'mtr', 'MELO3C004519.2' => 'cme', 'MELO3C009710.2' => 'cme', 'MELO3C010444.2' => 'cme', 'MELO3C014713.2' => 'cme', 'MELO3C019165.2' => 'cme', 'MELO3C022772.2' => 'cme', 'Migut.C01185' => 'egut', 'Migut.J01170' => 'egut', 'Migut.J01171' => 'egut', 'Migut.J01536' => 'egut', 'Migut.K00216' => 'egut', 'MSTRG.10752' => 'ama', 'MSTRG.19606' => 'ama', 'MSTRG.19731' => 'ama', 'MSTRG.25413' => 'ama', 'MSTRG.26206' => 'ama', 'MSTRG.6252' => 'ama', 'Nitab4.5_0000613g0050' => 'nta', 'Nitab4.5_0001141g0010' => 'nta', 'Nitab4.5_0001438g0140' => 'nta', 'Nitab4.5_0001623g0020' => 'nta', 'Nitab4.5_0002857g0010' => 'nta', 'Nitab4.5_0003302g0080' => 'nta', 'Nitab4.5_0004148g0070' => 'nta', 'Nitab4.5_0004801g0060' => 'nta', 'Nitab4.5_0023821g0010' => 'nta', 'Nn1g08621' => 'nnu', 'Nn4g25004' => 'nnu', 'Nn5g28059' => 'nnu', 'Nn7g37933' => 'nnu', 'Nn8g39389' => 'nnu', 'Nn8g39580' => 'nnu', 'Oeu029774.2' => 'oeu', 'Oeu032948.1' => 'oeu', 'Oeu032949.1' => 'oeu', 'Oeu032964.2' => 'oeu', 'Oeu043787.1' => 'oeu', 'Oeu043957.1' => 'oeu', 'Oeu044205.1' => 'oeu', 'Oeu050263.1' => 'oeu', 'Oeu058057.2' => 'oeu', 'Oeu058063.1' => 'oeu', 'Os01g0174300' => 'osa', 'Os01g0814900' => 'osa', 'Os02g0770800' => 'osa', 'Os05g0488900' => 'osa', 'Os08g0468100' => 'osa', 'Os08g0468700' => 'osa', 'Peaxi162Scf00004g00362' => 'pax', 'Peaxi162Scf00063g00121' => 'pax', 'Peaxi162Scf00343g00049' => 'pax', 'Peaxi162Scf00369g00064' => 'pax', 'Peaxi162Scf00369g00065' => 'pax', 'Peaxi162Scf00476g00046' => 'pax', 'Peaxi162Scf00476g00632' => 'pax', 'Peaxi162Scf00575g00039' => 'pax', 'Peaxi162Scf00958g00036' => 'pax', 'Peaxi162Scf00958g00037' => 'pax', 'Peaxi162Scf01400g00021' => 'pax', 'PGR042G3238' => 'pgr', 'PGR044G1193' => 'pgr', 'PGR102G2134' => 'pgr', 'PGR102G3364' => 'pgr', 'PGR142G1426' => 'pgr', 'PGR142G2734' => 'pgr', 'PGSC0003DMG400028214' => 'stu', 'PGSC0003DMG400030212' => 'stu', 'Phvul.001G107300' => 'pvu', 'Phvul.003G162900' => 'pvu', 'Phvul.008G168000' => 'pvu', 'Phvul.009G121000' => 'pvu', 'Phvul.011G187800' => 'pvu', 'Potri.002G088600' => 'ptr', 'Potri.004G194400' => 'ptr', 'Potri.005G172400' => 'ptr', 'Potri.006G218600' => 'ptr', 'Potri.007G072750' => 'ptr', 'Potri.009G157000' => 'ptr', 'Potri.010G246800' => 'ptr', 'Potri.013G067300' => 'ptr', 'Potri.015G068500' => 'ptr', 'Pp3c10_9540' => 'ppa', 'Pp3c10_9670' => 'ppa', 'Pp3c14_9410' => 'ppa', 'Pp3c1_15390' => 'ppa', 'Pp3c2_21100' => 'ppa', 'Pp3c4_18080' => 'ppa', 'Pp3c6_18860' => 'ppa', 'PRCOL_00000542' => 'pco', 'PRCOL_00001335' => 'pco', 'PRCOL_00003047' => 'pco', 'PRCOL_00004551' => 'pco', 'PRCOL_00004594' => 'pco', 'PRCOL_00005404' => 'pco', 'Prupe.1G505400' => 'ppe', 'Prupe.6G154300' => 'ppe', 'Prupe.7G017700' => 'ppe', 'Prupe.7G239800' => 'ppe', 'Psat0s3059g0080' => 'psa', 'Psat2g077040' => 'psa', 'Psat3g085480' => 'psa', 'Psat4g040440' => 'psa', 'Psat5g112400' => 'psa', 'Psat5g134440' => 'psa', 'PSO170G4324' => 'pso', 'PSO170G5562' => 'pso', 'PSO339G0893' => 'pso', 'PSO384G4743' => 'pso', 'PSO455G0024' => 'pso', 'PSO455G0205' => 'pso', 'PSO528G0278' => 'pso', 'QL01p020512' => 'qlo', 'QL02p087833' => 'qlo', 'QL04p050355' => 'qlo', 'QL04p050360' => 'qlo', 'QL04p050375' => 'qlo', 'QL07p016696' => 'qlo', 'QL09p037275' => 'qlo', 'RcHm_v2.0_Chr1g0371001' => 'rch', 'RcHm_v2.0_Chr2g0089111' => 'rch', 'RcHm_v2.0_Chr3g0485111' => 'rch', 'RcHm_v2.0_Chr3g0495881' => 'rch', 'RcHm_v2.0_Chr5g0049861' => 'rch', 'RcHm_v2.0_Chr7g0240971' => 'rch', 'Rhsim01G0076500' => 'rsi', 'Rhsim03G0046200' => 'rsi', 'Rhsim06G0108700' => 'rsi', 'Rhsim06G0108800' => 'rsi', 'Rhsim08G0072000' => 'rsi', 'Rhsim08G0072100' => 'rsi', 'Rhsim13G0200400' => 'rsi', 'Sabra02G0069800' => 'sbr', 'Sabra05G0130000' => 'sbr', 'Sabra06G0168500' => 'sbr', 'Sabra09G0122800' => 'sbr', 'Sabra10G0192300' => 'sbr', 'Sabra13G0058700' => 'sbr', 'SalBow7G1618' => 'sbo', 'SalBow7G4024' => 'sbo', 'Sc01g0001500' => 'sci', 'Sc07g0007650' => 'sci', 'Sc18g0000690' => 'sci', 'Sed0004027' => 'sed', 'Sed0004439' => 'sed', 'Sed0010585' => 'sed', 'Sed0014084' => 'sed', 'Sed0017233' => 'sed', 'Sed0018365' => 'sed', 'Sed0022627' => 'sed', 'Sed0025281' => 'sed', 'SEGI_07411' => 'sgi', 'SEGI_18220' => 'sgi', 'SEGI_20596' => 'sgi', 'SGA_v2.0_scaffold17G07978' => 'sas', 'SGA_v2.0_scaffold229G43326' => 'sas', 'SGA_v2.0_scaffold45G17070' => 'sas', 'SGA_v2.0_scaffold52G19019' => 'sas', 'SGA_v2.0_scaffold66G22378' => 'sas', 'SGA_v2.0_scaffold69G23220' => 'sas', 'SHI14863' => 'shi', 'SHI14864' => 'shi', 'SMO134G0168' => 'smo', 'SMO331G0069' => 'smo', 'Solyc05g018520.3' => 'sly', 'Solyc10g081440.2' => 'sly', 'Solyc11g013810.3' => 'sly', 'Sopen05g015640' => 'spe', 'Sopen10g031940' => 'spe', 'Sopen11g008740' => 'spe', 'Sp1g31260' => 'spa', 'Sp5g32930' => 'spa', 'Sp6g24330' => 'spa', 'Sp6g26480' => 'spa', 'TAR623G0776' => 'tar', 'TAR624G1222' => 'tar', 'TAR625G0129' => 'tar', 'TAR628G1493' => 'tar', 'TAR633G2746' => 'tar', 'TAR636G0812' => 'tar', 'THA.LOC104798845' => 'tha', 'THA.LOC104799648' => 'tha', 'THA.LOC104813138' => 'tha', 'THA.LOC104813644' => 'tha', 'THA.LOC104817024' => 'tha', 'THA.LOC104820801' => 'tha', 'Thecc.05G239600' => 'tca', 'Thecc.08G117500' => 'tca', 'Thecc.09G123300' => 'tca', 'Thecc.09G263700' => 'tca', 'Thhalv10003628m.g' => 'esa', 'Thhalv10014199m.g' => 'esa', 'Thhalv10014327m.g' => 'esa', 'Thhalv10018092m.g' => 'esa', 'TPR.G32932' => 'tpr', 'TPR.G32938' => 'tpr', 'TPR.G32951' => 'tpr', 'TPR.G35748' => 'tpr', 'TPR.G37984' => 'tpr', 'TPR.G7839' => 'tpr', 'TPR.G8508' => 'tpr', 'TWI32G0011' => 'twi', 'TWI34G0260' => 'twi', 'TWI56G0099' => 'twi', 'TWI60G0536' => 'twi', 'TWI63G0382' => 'twi', 'TWI79G0752' => 'twi', 'unitig_21.g20659' => 'ugi', 'unitig_699.g19212' => 'ugi', 'unitig_744.g23958' => 'ugi', 'vmacro04069' => 'vma', 'vmacro04070' => 'vma', 'vmacro07640' => 'vma', 'vmacro12531' => 'vma', 'vmacro20489' => 'vma', 'vmacro20598' => 'vma', 'VMungo0647G0621' => 'vmu', 'VMungo1127G1753' => 'vmu', 'VMungo1215G2224' => 'vmu', 'VMungo1309G2713' => 'vmu', 'VMungo1383G1796' => 'vmu', 'Zm00001eb037860' => 'zma', 'Zm00001eb082240' => 'zma', 'Zm00001eb122720' => 'zma', 'Zm00001eb149860' => 'zma', 'Zm00001eb152720' => 'zma', 'Zm00001eb176470' => 'zma', 'Zm00001eb193390' => 'zma', 'Zm00001eb209630' => 'zma', 'Zm00001eb213470' => 'zma', 'Zm00001eb245550' => 'zma', 'Zm00001eb256260' => 'zma', 'Zm00001eb291160' => 'zma', 'Zm00001eb346170' => 'zma', 'Zm00001eb390110' => 'zma', 'Zm00001eb425210' => 'zma', 'Zm00001eb429490' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D000951', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000951' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D000951', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '631', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000951' ) ), 'genes' => array( 'A02p04440' => 'bna', 'A02p21820' => 'bna', 'A02p21830' => 'bna', 'A03p08480' => 'bna', 'A07p15250' => 'bna', 'A07p27850' => 'bna', 'A07p43060' => 'bna', 'A10p21680' => 'bna', 'Aa31LG11G11810' => 'aar', 'Aa31LG4G7870' => 'aar', 'Aa31LG6G8050' => 'aar', 'Aa31LG6G9110' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.2307' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3621' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5248' => 'aag', 'Actinidia02592' => 'ach', 'Actinidia18376' => 'ach', 'Actinidia22002' => 'ach', 'Actinidia37832' => 'ach', 'Ah.05g172520' => 'amhyb', 'Ah.05g172530' => 'amhyb', 'Ah.06g191190' => 'amhyb', 'Ah.12g061950' => 'amhyb', 'Ah.15g099310' => 'amhyb', 'Ah.16g110180' => 'amhyb', 'AL1G51170' => 'aly', 'AL2G37990' => 'aly', 'AL6G28860' => 'aly', 'AL6G31630' => 'aly', 'Aqoxy1G00099' => 'aox', 'Aqoxy1G04088' => 'aox', 'Aqoxy6G00153' => 'aox', 'Aqoxy7G02098' => 'aox', 'Aqoxy7G02149' => 'aox', 'arahy.Tifrunner.gnm1.ann1.34G2NL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L21K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B1DGRD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B2KMHD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FIU44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9J1TW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y57IDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YZT8QC' => 'arhy', 'AT1G37130' => 'ath', 'AT1G77760' => 'ath', 'AT5G17770' => 'ath', 'AT5G20080' => 'ath', 'ATR0068G079' => 'atr', 'ATR0684G206' => 'atr', 'ATR1156G037' => 'atr', 'Atru.chr13.1323' => 'acertr', 'Atru.chr13.1367' => 'acertr', 'Atru.chr2.1564' => 'acertr', 'Atru.chr3.2915' => 'acertr', 'Atru.chr7.1199' => 'acertr', 'Atru.chr8.893' => 'acertr', 'Atru.chr8.894' => 'acertr', 'AUR62001601' => 'cqu', 'AUR62004699' => 'cqu', 'AUR62011088' => 'cqu', 'AUR62011089' => 'cqu', 'AUR62011110' => 'cqu', 'AUR62011111' => 'cqu', 'AUR62020178' => 'cqu', 'AUR62023616' => 'cqu', 'AUR62033478' => 'cqu', 'AUR62036515' => 'cqu', 'AUR62037059' => 'cqu', 'BcaB01g04810' => 'bca', 'BcaB01g04911' => 'bca', 'BcaB01g05154' => 'bca', 'BcaB02g07129' => 'bca', 'BcaB03g15925' => 'bca', 'BcaB05g23276' => 'bca', 'BcaB05g25075' => 'bca', 'BcaB08g36746' => 'bca', 'BcaC03g13542' => 'bca', 'BcaC03g15090' => 'bca', 'BcaC03g15770' => 'bca', 'BcaC08g45455' => 'bca', 'BolC2t06841H' => 'bol', 'BolC2t07884H' => 'bol', 'BolC2t08722H' => 'bol', 'BolC2t09525H' => 'bol', 'BolC3t13476H' => 'bol', 'BolC6t35954H' => 'bol', 'BolC6t38246H' => 'bol', 'BolC6t40193H' => 'bol', 'BraA02t05408Z' => 'bra', 'BraA02t07185Z' => 'bra', 'BraA03t10171Z' => 'bra', 'BraA07t30424Z' => 'bra', 'BraA07t31827Z' => 'bra', 'C02p09340' => 'bna', 'C02p26490' => 'bna', 'C02p35110' => 'bna', 'C03p09880' => 'bna', 'C06p30820' => 'bna', 'C06p51710' => 'bna', 'C09p66260' => 'bna', 'CAN.G128.141' => 'can', 'CAN.G372.2' => 'can', 'CAN.G44.5' => 'can', 'CAN.G935.7' => 'can', 'CANSAT11G2446' => 'cansat', 'CANSAT25G1717' => 'cansat', 'CANSAT78G1357' => 'cansat', 'CARHR034720' => 'chi', 'CARHR071270' => 'chi', 'CARHR192750' => 'chi', 'CARHR195400' => 'chi', 'Carub.0001s3407' => 'cru', 'Carub.0002s2466' => 'cru', 'Carub.0006s1600' => 'cru', 'Carub.0006s1846' => 'cru', 'Ca_03444_v3' => 'car', 'Ca_12170_v3' => 'car', 'Ca_12848_v3' => 'car', 'Ca_15220_v3' => 'car', 'Ca_16254_v3' => 'car', 'Ca_21695_v3' => 'car', 'CBR_g36815' => 'cbr', 'CBR_g36817' => 'cbr', 'CBR_g4013' => 'cbr', 'CBR_g45637' => 'cbr', 'CBR_g46196' => 'cbr', 'CBR_g46198' => 'cbr', 'CBR_g46200' => 'cbr', 'CBR_g46898' => 'cbr', 'Cc00_g12040' => 'ccan', 'Cc06_g08770' => 'ccan', 'Cc06_g21550' => 'ccan', 'Cc10_g14390' => 'ccan', 'CDE02G2349' => 'cde', 'CDE04G2035' => 'cde', 'CDE06G0176' => 'cde', 'CDE06G2658' => 'cde', 'Cfa010247' => 'cfa', 'Cfa010454' => 'cfa', 'Cfa015964' => 'cfa', 'Cfa019869' => 'cfa', 'Cfa022855' => 'cfa', 'Cfa025215' => 'cfa', 'Cfa026789' => 'cfa', 'Cfa026899' => 'cfa', 'Cfa027359' => 'cfa', 'Ciclev10000220m.g' => 'ccl', 'Ciclev10008900m.g' => 'ccl', 'Ciclev10018119m.g' => 'ccl', 'Ciclev10018210m.g' => 'ccl', 'Ciclev10032349m.g' => 'ccl', 'CiPaw.03G242000' => 'cil', 'CiPaw.05G228100' => 'cil', 'CiPaw.06G025400' => 'cil', 'CiPaw.09G165700' => 'cil', 'CiPaw.13G047000' => 'cil', 'CiPaw.13G127400' => 'cil', 'ClCG02G024270' => 'cla', 'ClCG03G009280' => 'cla', 'ClCG03G009290' => 'cla', 'ClCG04G005060' => 'cla', 'ClCG10G016650' => 'cla', 'ClCG11G002910' => 'cla', 'ClCG11G015520' => 'cla', 'COL.COLO4_05763' => 'col', 'COL.COLO4_06727' => 'col', 'COL.COLO4_25291' => 'col', 'COL.COLO4_32799' => 'col', 'Cpa.g.c35493' => 'cpa', 'Cpa.g.sc49.137' => 'cpa', 'Cpa.g.sc73.10' => 'cpa', 'Cre03.g145547' => 'cre', 'Cre06.g303050' => 'cre', 'Cre09.g410950' => 'cre', 'Cre11.g481126' => 'cre', 'CsaV3_2G002740' => 'csa', 'CsaV3_2G026760' => 'csa', 'CsaV3_2G026770' => 'csa', 'CsaV3_2G026780' => 'csa', 'CsaV3_3G039690' => 'csa', 'CsaV3_4G017410' => 'csa', 'CsaV3_4G028560' => 'csa', 'CsaV3_4G029030' => 'csa', 'CsaV3_5G023350' => 'csa', 'CsaV3_5G023360' => 'csa', 'CsaV3_5G023370' => 'csa', 'CSS0016952' => 'camsi', 'CSS0027199' => 'camsi', 'CSS0031990' => 'camsi', 'CSS0033298' => 'camsi', 'CSS0047384' => 'camsi', 'CSS0049606' => 'camsi', 'DCAR_000386' => 'dca', 'DCAR_009200' => 'dca', 'DCAR_013497' => 'dca', 'DCAR_014288' => 'dca', 'DCAR_014289' => 'dca', 'DCAR_014795' => 'dca', 'DCAR_017827' => 'dca', 'DCAR_020640' => 'dca', 'Dinv03539' => 'din', 'Dinv03541' => 'din', 'Dinv14565' => 'din', 'Dinv18589' => 'din', 'Dinv27378' => 'din', 'Dinv36545' => 'din', 'Dinv37029' => 'din', 'Dinv44181' => 'din', 'Duzib041G0012' => 'dzi', 'Duzib093G1979' => 'dzi', 'Duzib116G0574' => 'dzi', 'Duzib128G0676' => 'dzi', 'Duzib150G0417' => 'dzi', 'Duzib168G1010' => 'dzi', 'Duzib168G1935' => 'dzi', 'Duzib177G0020' => 'dzi', 'ECA232G3064' => 'eca', 'ECA236G2962' => 'eca', 'ECA240G1046' => 'eca', 'ECA248G0272' => 'eca', 'EL10Ac1g00033' => 'bvu', 'EL10Ac4g08779' => 'bvu', 'EL10Ac5g11675' => 'bvu', 'EL10Ac6g14816' => 'bvu', 'EL10Ac7g16234' => 'bvu', 'EL10Ac8g18618' => 'bvu', 'Eucgr.B03792' => 'egr', 'Eucgr.C01134' => 'egr', 'Eucgr.F03744' => 'egr', 'Eucgr.G02644' => 'egr', 'Eucgr.G02645' => 'egr', 'Eucgr.G02646' => 'egr', 'Eucgr.G02647' => 'egr', 'Eucgr.G02648' => 'egr', 'Eucgr.K01543' => 'egr', 'Eucgr.L01814' => 'egr', 'Eucgr.L01815' => 'egr', 'Eucgr.L02937' => 'egr', 'FAN04G1553' => 'fan', 'FAN08G0223' => 'fan', 'FAN11G0376' => 'fan', 'FAN13G1442' => 'fan', 'FAN16G3302' => 'fan', 'FAN18G4378' => 'fan', 'FAN19G0775' => 'fan', 'FAN19G2791' => 'fan', 'FAN23G0118' => 'fan', 'FAN23G2794' => 'fan', 'FAN25G0542' => 'fan', 'FAN26G2078' => 'fan', 'FAN26G2816' => 'fan', 'FAN28G2833' => 'fan', 'FvH4_1g03580' => 'fve', 'FvH4_1g29800' => 'fve', 'FvH4_3g27250' => 'fve', 'FvH4_5g39010' => 'fve', 'Glyma.03G006900' => 'gma', 'Glyma.05G008100' => 'gma', 'Glyma.06G109200' => 'gma', 'Glyma.06G109250' => 'gma', 'Glyma.08G228300' => 'gma', 'Glyma.13G084000' => 'gma', 'Glyma.14G164900' => 'gma', 'Glyma.14G165000' => 'gma', 'Glyma.15G220800' => 'gma', 'Glyma.17G116400' => 'gma', 'Glyma.19G119000' => 'gma', 'Glyma.20G057600' => 'gma', 'Gohir.A01G187900' => 'ghi', 'Gohir.A02G074700' => 'ghi', 'Gohir.A06G057300' => 'ghi', 'Gohir.A08G053050' => 'ghi', 'Gohir.A08G220900' => 'ghi', 'Gohir.A09G105000' => 'ghi', 'Gohir.A11G226400' => 'ghi', 'Gohir.A11G227100' => 'ghi', 'Gohir.D01G181700' => 'ghi', 'Gohir.D02G081700' => 'ghi', 'Gohir.D04G151650' => 'ghi', 'Gohir.D06G055600' => 'ghi', 'Gohir.D08G062600' => 'ghi', 'Gohir.D08G237500' => 'ghi', 'Gohir.D08G237600' => 'ghi', 'Gohir.D08G259950' => 'ghi', 'Gohir.D09G101700' => 'ghi', 'Gohir.D11G201566' => 'ghi', 'Gohir.D11G239400' => 'ghi', 'Gohir.D11G239450' => 'ghi', 'Gohir.D11G239500' => 'ghi', 'Gorai.002G220700' => 'gra', 'Gorai.004G064800' => 'gra', 'Gorai.004G253100' => 'gra', 'Gorai.004G277800' => 'gra', 'Gorai.005G091600' => 'gra', 'Gorai.006G119100' => 'gra', 'Gorai.007G252900' => 'gra', 'Gorai.007G253000' => 'gra', 'Gorai.007G253100' => 'gra', 'Gorai.010G064900' => 'gra', 'Gorai.012G138400' => 'gra', 'GSVIVG01008935001' => 'vvi', 'GSVIVG01015504001' => 'vvi', 'GSVIVG01027210001' => 'vvi', 'GSVIVG01029937001' => 'vvi', 'GSVIVG01037441001' => 'vvi', 'HanXRQChr04g0125521' => 'han', 'HanXRQChr06g0178121' => 'han', 'HanXRQChr09g0257821' => 'han', 'HanXRQChr12g0356351' => 'han', 'HanXRQChr12g0376121' => 'han', 'HanXRQChr13g0406471' => 'han', 'HanXRQChr15g0487461' => 'han', 'Haze_00518' => 'cav', 'Haze_03408' => 'cav', 'Haze_15953' => 'cav', 'Haze_15954' => 'cav', 'Haze_15955' => 'cav', 'Haze_20388' => 'cav', 'Haze_23637' => 'cav', 'Haze_27739' => 'cav', 'Hma1.2p1_0151F.1_g067440' => 'hma', 'Hma1.2p1_0188F.1_g082470' => 'hma', 'Hma1.2p1_0665F.1_g199140' => 'hma', 'Hma1.2p1_1544F.1_g289890' => 'hma', 'HPP92_000789' => 'vpl', 'HPP92_000811' => 'vpl', 'HPP92_005148' => 'vpl', 'HPP92_010974' => 'vpl', 'HPP92_010975' => 'vpl', 'Hund09143' => 'sun', 'Hund16825' => 'sun', 'Hund20977' => 'sun', 'Hund27052' => 'sun', 'Lalb_Chr07g0178811' => 'lal', 'Lalb_Chr08g0241671' => 'lal', 'Lalb_Chr12g0197821' => 'lal', 'Lalb_Chr14g0364971' => 'lal', 'Lalb_Chr19g0132521' => 'lal', 'Lalb_Chr22g0358461' => 'lal', 'Lj1C1069G3' => 'lonja', 'Lj1g0009233' => 'lja', 'Lj1g0019275' => 'lja', 'Lj2C908G4' => 'lonja', 'Lj3g0010071' => 'lja', 'Lj4A40T47' => 'lonja', 'Lj4C40T2' => 'lonja', 'Lj4g0001261' => 'lja', 'Lj7A494G41' => 'lonja', 'Lj7A494T47' => 'lonja', 'Lj7A632G43' => 'lonja', 'Lj7A632G44' => 'lonja', 'Lj7C216T0' => 'lonja', 'Lj7C308T0' => 'lonja', 'Lsat_1_v5_gn_2_95180' => 'lsa', 'Lsat_1_v5_gn_4_177141' => 'lsa', 'Lsat_1_v5_gn_4_23940' => 'lsa', 'Lsat_1_v5_gn_5_154461' => 'lsa', 'Lsat_1_v5_gn_5_97060' => 'lsa', 'Lsat_1_v5_gn_7_94901' => 'lsa', 'Lsat_1_v5_gn_8_106740' => 'lsa', 'Manes.04G055700' => 'mes', 'Manes.06G049900' => 'mes', 'Manes.09G135900' => 'mes', 'Manes.14G130700' => 'mes', 'Manes.18G073250' => 'mes', 'Manes.S076800' => 'mes', 'Mapoly0013s0176' => 'mpo', 'Mapoly0023s0052' => 'mpo', 'Mapoly0086s0054' => 'mpo', 'Mapoly0097s0074' => 'mpo', 'MBI03_g11129_MAGBIO' => 'mbi', 'MBI03_g11130_MAGBIO' => 'mbi', 'MBI03_g11150_MAGBIO' => 'mbi', 'MBI13_g41273_MAGBIO' => 'mbi', 'MBI19_g01934_MAGBIO' => 'mbi', 'MBI19_g34089_MAGBIO' => 'mbi', 'MCO01G186' => 'mco', 'MCO02G435' => 'mco', 'MCO04G054' => 'mco', 'MCO04G200' => 'mco', 'MCO12G322' => 'mco', 'MD00G1107200' => 'mdo', 'MD02G1035100' => 'mdo', 'MD08G1172400' => 'mdo', 'MD12G1013300' => 'mdo', 'MD14G1010800' => 'mdo', 'MD15G1357900' => 'mdo', 'Medtr3g073150' => 'mtr', 'Medtr3g073180' => 'mtr', 'Medtr3g079510' => 'mtr', 'Medtr3g479590' => 'mtr', 'Medtr4g113900' => 'mtr', 'Medtr4g114030' => 'mtr', 'Medtr5g059820' => 'mtr', 'Medtr7g087090' => 'mtr', 'Medtr8g044160' => 'mtr', 'MELO3C004519.2' => 'cme', 'MELO3C009710.2' => 'cme', 'MELO3C010444.2' => 'cme', 'MELO3C014713.2' => 'cme', 'MELO3C019165.2' => 'cme', 'MELO3C022772.2' => 'cme', 'Migut.C01185' => 'egut', 'Migut.J01170' => 'egut', 'Migut.J01171' => 'egut', 'Migut.J01536' => 'egut', 'Migut.K00216' => 'egut', 'MSTRG.10752' => 'ama', 'MSTRG.19606' => 'ama', 'MSTRG.19731' => 'ama', 'MSTRG.25413' => 'ama', 'MSTRG.26206' => 'ama', 'MSTRG.6252' => 'ama', 'Nitab4.5_0000613g0050' => 'nta', 'Nitab4.5_0001141g0010' => 'nta', 'Nitab4.5_0001438g0140' => 'nta', 'Nitab4.5_0001623g0020' => 'nta', 'Nitab4.5_0002857g0010' => 'nta', 'Nitab4.5_0003302g0080' => 'nta', 'Nitab4.5_0004148g0070' => 'nta', 'Nitab4.5_0004801g0060' => 'nta', 'Nitab4.5_0023821g0010' => 'nta', 'Nn1g08621' => 'nnu', 'Nn4g25004' => 'nnu', 'Nn5g28059' => 'nnu', 'Nn7g37933' => 'nnu', 'Nn8g39389' => 'nnu', 'Nn8g39580' => 'nnu', 'Oeu029774.2' => 'oeu', 'Oeu032948.1' => 'oeu', 'Oeu032949.1' => 'oeu', 'Oeu032964.2' => 'oeu', 'Oeu043787.1' => 'oeu', 'Oeu043957.1' => 'oeu', 'Oeu044205.1' => 'oeu', 'Oeu050263.1' => 'oeu', 'Oeu058057.2' => 'oeu', 'Oeu058063.1' => 'oeu', 'Os01g0174300' => 'osa', 'Os01g0814900' => 'osa', 'Os02g0770800' => 'osa', 'Os05g0488900' => 'osa', 'Os08g0468100' => 'osa', 'Os08g0468700' => 'osa', 'Peaxi162Scf00004g00362' => 'pax', 'Peaxi162Scf00063g00121' => 'pax', 'Peaxi162Scf00343g00049' => 'pax', 'Peaxi162Scf00369g00064' => 'pax', 'Peaxi162Scf00369g00065' => 'pax', 'Peaxi162Scf00476g00046' => 'pax', 'Peaxi162Scf00476g00632' => 'pax', 'Peaxi162Scf00575g00039' => 'pax', 'Peaxi162Scf00958g00036' => 'pax', 'Peaxi162Scf00958g00037' => 'pax', 'Peaxi162Scf01400g00021' => 'pax', 'PGR042G3238' => 'pgr', 'PGR044G1193' => 'pgr', 'PGR102G2134' => 'pgr', 'PGR102G3364' => 'pgr', 'PGR142G1426' => 'pgr', 'PGR142G2734' => 'pgr', 'PGSC0003DMG400028214' => 'stu', 'PGSC0003DMG400030212' => 'stu', 'Phvul.001G107300' => 'pvu', 'Phvul.003G162900' => 'pvu', 'Phvul.008G168000' => 'pvu', 'Phvul.009G121000' => 'pvu', 'Phvul.011G187800' => 'pvu', 'Potri.002G088600' => 'ptr', 'Potri.004G194400' => 'ptr', 'Potri.005G172400' => 'ptr', 'Potri.006G218600' => 'ptr', 'Potri.007G072750' => 'ptr', 'Potri.009G157000' => 'ptr', 'Potri.010G246800' => 'ptr', 'Potri.013G067300' => 'ptr', 'Potri.015G068500' => 'ptr', 'Pp3c10_9540' => 'ppa', 'Pp3c10_9670' => 'ppa', 'Pp3c14_9410' => 'ppa', 'Pp3c1_15390' => 'ppa', 'Pp3c2_21100' => 'ppa', 'Pp3c4_18080' => 'ppa', 'Pp3c6_18860' => 'ppa', 'PRCOL_00000542' => 'pco', 'PRCOL_00001335' => 'pco', 'PRCOL_00003047' => 'pco', 'PRCOL_00004551' => 'pco', 'PRCOL_00004594' => 'pco', 'PRCOL_00005404' => 'pco', 'Prupe.1G505400' => 'ppe', 'Prupe.6G154300' => 'ppe', 'Prupe.7G017700' => 'ppe', 'Prupe.7G239800' => 'ppe', 'Psat0s3059g0080' => 'psa', 'Psat2g077040' => 'psa', 'Psat3g085480' => 'psa', 'Psat4g040440' => 'psa', 'Psat5g112400' => 'psa', 'Psat5g134440' => 'psa', 'PSO170G4324' => 'pso', 'PSO170G5562' => 'pso', 'PSO339G0893' => 'pso', 'PSO384G4743' => 'pso', 'PSO455G0024' => 'pso', 'PSO455G0205' => 'pso', 'PSO528G0278' => 'pso', 'QL01p020512' => 'qlo', 'QL02p087833' => 'qlo', 'QL04p050355' => 'qlo', 'QL04p050360' => 'qlo', 'QL04p050375' => 'qlo', 'QL07p016696' => 'qlo', 'QL09p037275' => 'qlo', 'RcHm_v2.0_Chr1g0371001' => 'rch', 'RcHm_v2.0_Chr2g0089111' => 'rch', 'RcHm_v2.0_Chr3g0485111' => 'rch', 'RcHm_v2.0_Chr3g0495881' => 'rch', 'RcHm_v2.0_Chr5g0049861' => 'rch', 'RcHm_v2.0_Chr7g0240971' => 'rch', 'Rhsim01G0076500' => 'rsi', 'Rhsim03G0046200' => 'rsi', 'Rhsim06G0108700' => 'rsi', 'Rhsim06G0108800' => 'rsi', 'Rhsim08G0072000' => 'rsi', 'Rhsim08G0072100' => 'rsi', 'Rhsim13G0200400' => 'rsi', 'Sabra02G0069800' => 'sbr', 'Sabra05G0130000' => 'sbr', 'Sabra06G0168500' => 'sbr', 'Sabra09G0122800' => 'sbr', 'Sabra10G0192300' => 'sbr', 'Sabra13G0058700' => 'sbr', 'SalBow7G1618' => 'sbo', 'SalBow7G4024' => 'sbo', 'Sc01g0001500' => 'sci', 'Sc07g0007650' => 'sci', 'Sc18g0000690' => 'sci', 'Sed0004027' => 'sed', 'Sed0004439' => 'sed', 'Sed0010585' => 'sed', 'Sed0014084' => 'sed', 'Sed0017233' => 'sed', 'Sed0018365' => 'sed', 'Sed0022627' => 'sed', 'Sed0025281' => 'sed', 'SEGI_07411' => 'sgi', 'SEGI_18220' => 'sgi', 'SEGI_20596' => 'sgi', 'SGA_v2.0_scaffold17G07978' => 'sas', 'SGA_v2.0_scaffold229G43326' => 'sas', 'SGA_v2.0_scaffold45G17070' => 'sas', 'SGA_v2.0_scaffold52G19019' => 'sas', 'SGA_v2.0_scaffold66G22378' => 'sas', 'SGA_v2.0_scaffold69G23220' => 'sas', 'SHI14863' => 'shi', 'SHI14864' => 'shi', 'SMO134G0168' => 'smo', 'SMO331G0069' => 'smo', 'Solyc05g018520.3' => 'sly', 'Solyc10g081440.2' => 'sly', 'Solyc11g013810.3' => 'sly', 'Sopen05g015640' => 'spe', 'Sopen10g031940' => 'spe', 'Sopen11g008740' => 'spe', 'Sp1g31260' => 'spa', 'Sp5g32930' => 'spa', 'Sp6g24330' => 'spa', 'Sp6g26480' => 'spa', 'TAR623G0776' => 'tar', 'TAR624G1222' => 'tar', 'TAR625G0129' => 'tar', 'TAR628G1493' => 'tar', 'TAR633G2746' => 'tar', 'TAR636G0812' => 'tar', 'THA.LOC104798845' => 'tha', 'THA.LOC104799648' => 'tha', 'THA.LOC104813138' => 'tha', 'THA.LOC104813644' => 'tha', 'THA.LOC104817024' => 'tha', 'THA.LOC104820801' => 'tha', 'Thecc.05G239600' => 'tca', 'Thecc.08G117500' => 'tca', 'Thecc.09G123300' => 'tca', 'Thecc.09G263700' => 'tca', 'Thhalv10003628m.g' => 'esa', 'Thhalv10014199m.g' => 'esa', 'Thhalv10014327m.g' => 'esa', 'Thhalv10018092m.g' => 'esa', 'TPR.G32932' => 'tpr', 'TPR.G32938' => 'tpr', 'TPR.G32951' => 'tpr', 'TPR.G35748' => 'tpr', 'TPR.G37984' => 'tpr', 'TPR.G7839' => 'tpr', 'TPR.G8508' => 'tpr', 'TWI32G0011' => 'twi', 'TWI34G0260' => 'twi', 'TWI56G0099' => 'twi', 'TWI60G0536' => 'twi', 'TWI63G0382' => 'twi', 'TWI79G0752' => 'twi', 'unitig_21.g20659' => 'ugi', 'unitig_699.g19212' => 'ugi', 'unitig_744.g23958' => 'ugi', 'vmacro04069' => 'vma', 'vmacro04070' => 'vma', 'vmacro07640' => 'vma', 'vmacro12531' => 'vma', 'vmacro20489' => 'vma', 'vmacro20598' => 'vma', 'VMungo0647G0621' => 'vmu', 'VMungo1127G1753' => 'vmu', 'VMungo1215G2224' => 'vmu', 'VMungo1309G2713' => 'vmu', 'VMungo1383G1796' => 'vmu', 'Zm00001eb037860' => 'zma', 'Zm00001eb082240' => 'zma', 'Zm00001eb122720' => 'zma', 'Zm00001eb149860' => 'zma', 'Zm00001eb152720' => 'zma', 'Zm00001eb176470' => 'zma', 'Zm00001eb193390' => 'zma', 'Zm00001eb209630' => 'zma', 'Zm00001eb213470' => 'zma', 'Zm00001eb245550' => 'zma', 'Zm00001eb256260' => 'zma', 'Zm00001eb291160' => 'zma', 'Zm00001eb346170' => 'zma', 'Zm00001eb390110' => 'zma', 'Zm00001eb425210' => 'zma', 'Zm00001eb429490' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D000951' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000951' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D000951' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000951' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
Warning (2): Invalid argument supplied for foreach() [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000951', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '631', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A02p04440' => 'bna', 'A02p21820' => 'bna', 'A02p21830' => 'bna', 'A03p08480' => 'bna', 'A07p15250' => 'bna', 'A07p27850' => 'bna', 'A07p43060' => 'bna', 'A10p21680' => 'bna', 'Aa31LG11G11810' => 'aar', 'Aa31LG4G7870' => 'aar', 'Aa31LG6G8050' => 'aar', 'Aa31LG6G9110' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.2307' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3621' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5248' => 'aag', 'Actinidia02592' => 'ach', 'Actinidia18376' => 'ach', 'Actinidia22002' => 'ach', 'Actinidia37832' => 'ach', 'Ah.05g172520' => 'amhyb', 'Ah.05g172530' => 'amhyb', 'Ah.06g191190' => 'amhyb', 'Ah.12g061950' => 'amhyb', 'Ah.15g099310' => 'amhyb', 'Ah.16g110180' => 'amhyb', 'AL1G51170' => 'aly', 'AL2G37990' => 'aly', 'AL6G28860' => 'aly', 'AL6G31630' => 'aly', 'Aqoxy1G00099' => 'aox', 'Aqoxy1G04088' => 'aox', 'Aqoxy6G00153' => 'aox', 'Aqoxy7G02098' => 'aox', 'Aqoxy7G02149' => 'aox', 'arahy.Tifrunner.gnm1.ann1.34G2NL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L21K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B1DGRD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B2KMHD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FIU44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9J1TW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y57IDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YZT8QC' => 'arhy', 'AT1G37130' => 'ath', 'AT1G77760' => 'ath', 'AT5G17770' => 'ath', 'AT5G20080' => 'ath', 'ATR0068G079' => 'atr', 'ATR0684G206' => 'atr', 'ATR1156G037' => 'atr', 'Atru.chr13.1323' => 'acertr', 'Atru.chr13.1367' => 'acertr', 'Atru.chr2.1564' => 'acertr', 'Atru.chr3.2915' => 'acertr', 'Atru.chr7.1199' => 'acertr', 'Atru.chr8.893' => 'acertr', 'Atru.chr8.894' => 'acertr', 'AUR62001601' => 'cqu', 'AUR62004699' => 'cqu', 'AUR62011088' => 'cqu', 'AUR62011089' => 'cqu', 'AUR62011110' => 'cqu', 'AUR62011111' => 'cqu', 'AUR62020178' => 'cqu', 'AUR62023616' => 'cqu', 'AUR62033478' => 'cqu', 'AUR62036515' => 'cqu', 'AUR62037059' => 'cqu', 'BcaB01g04810' => 'bca', 'BcaB01g04911' => 'bca', 'BcaB01g05154' => 'bca', 'BcaB02g07129' => 'bca', 'BcaB03g15925' => 'bca', 'BcaB05g23276' => 'bca', 'BcaB05g25075' => 'bca', 'BcaB08g36746' => 'bca', 'BcaC03g13542' => 'bca', 'BcaC03g15090' => 'bca', 'BcaC03g15770' => 'bca', 'BcaC08g45455' => 'bca', 'BolC2t06841H' => 'bol', 'BolC2t07884H' => 'bol', 'BolC2t08722H' => 'bol', 'BolC2t09525H' => 'bol', 'BolC3t13476H' => 'bol', 'BolC6t35954H' => 'bol', 'BolC6t38246H' => 'bol', 'BolC6t40193H' => 'bol', 'BraA02t05408Z' => 'bra', 'BraA02t07185Z' => 'bra', 'BraA03t10171Z' => 'bra', 'BraA07t30424Z' => 'bra', 'BraA07t31827Z' => 'bra', 'C02p09340' => 'bna', 'C02p26490' => 'bna', 'C02p35110' => 'bna', 'C03p09880' => 'bna', 'C06p30820' => 'bna', 'C06p51710' => 'bna', 'C09p66260' => 'bna', 'CAN.G128.141' => 'can', 'CAN.G372.2' => 'can', 'CAN.G44.5' => 'can', 'CAN.G935.7' => 'can', 'CANSAT11G2446' => 'cansat', 'CANSAT25G1717' => 'cansat', 'CANSAT78G1357' => 'cansat', 'CARHR034720' => 'chi', 'CARHR071270' => 'chi', 'CARHR192750' => 'chi', 'CARHR195400' => 'chi', 'Carub.0001s3407' => 'cru', 'Carub.0002s2466' => 'cru', 'Carub.0006s1600' => 'cru', 'Carub.0006s1846' => 'cru', 'Ca_03444_v3' => 'car', 'Ca_12170_v3' => 'car', 'Ca_12848_v3' => 'car', 'Ca_15220_v3' => 'car', 'Ca_16254_v3' => 'car', 'Ca_21695_v3' => 'car', 'CBR_g36815' => 'cbr', 'CBR_g36817' => 'cbr', 'CBR_g4013' => 'cbr', 'CBR_g45637' => 'cbr', 'CBR_g46196' => 'cbr', 'CBR_g46198' => 'cbr', 'CBR_g46200' => 'cbr', 'CBR_g46898' => 'cbr', 'Cc00_g12040' => 'ccan', 'Cc06_g08770' => 'ccan', 'Cc06_g21550' => 'ccan', 'Cc10_g14390' => 'ccan', 'CDE02G2349' => 'cde', 'CDE04G2035' => 'cde', 'CDE06G0176' => 'cde', 'CDE06G2658' => 'cde', 'Cfa010247' => 'cfa', 'Cfa010454' => 'cfa', 'Cfa015964' => 'cfa', 'Cfa019869' => 'cfa', 'Cfa022855' => 'cfa', 'Cfa025215' => 'cfa', 'Cfa026789' => 'cfa', 'Cfa026899' => 'cfa', 'Cfa027359' => 'cfa', 'Ciclev10000220m.g' => 'ccl', 'Ciclev10008900m.g' => 'ccl', 'Ciclev10018119m.g' => 'ccl', 'Ciclev10018210m.g' => 'ccl', 'Ciclev10032349m.g' => 'ccl', 'CiPaw.03G242000' => 'cil', 'CiPaw.05G228100' => 'cil', 'CiPaw.06G025400' => 'cil', 'CiPaw.09G165700' => 'cil', 'CiPaw.13G047000' => 'cil', 'CiPaw.13G127400' => 'cil', 'ClCG02G024270' => 'cla', 'ClCG03G009280' => 'cla', 'ClCG03G009290' => 'cla', 'ClCG04G005060' => 'cla', 'ClCG10G016650' => 'cla', 'ClCG11G002910' => 'cla', 'ClCG11G015520' => 'cla', 'COL.COLO4_05763' => 'col', 'COL.COLO4_06727' => 'col', 'COL.COLO4_25291' => 'col', 'COL.COLO4_32799' => 'col', 'Cpa.g.c35493' => 'cpa', 'Cpa.g.sc49.137' => 'cpa', 'Cpa.g.sc73.10' => 'cpa', 'Cre03.g145547' => 'cre', 'Cre06.g303050' => 'cre', 'Cre09.g410950' => 'cre', 'Cre11.g481126' => 'cre', 'CsaV3_2G002740' => 'csa', 'CsaV3_2G026760' => 'csa', 'CsaV3_2G026770' => 'csa', 'CsaV3_2G026780' => 'csa', 'CsaV3_3G039690' => 'csa', 'CsaV3_4G017410' => 'csa', 'CsaV3_4G028560' => 'csa', 'CsaV3_4G029030' => 'csa', 'CsaV3_5G023350' => 'csa', 'CsaV3_5G023360' => 'csa', 'CsaV3_5G023370' => 'csa', 'CSS0016952' => 'camsi', 'CSS0027199' => 'camsi', 'CSS0031990' => 'camsi', 'CSS0033298' => 'camsi', 'CSS0047384' => 'camsi', 'CSS0049606' => 'camsi', 'DCAR_000386' => 'dca', 'DCAR_009200' => 'dca', 'DCAR_013497' => 'dca', 'DCAR_014288' => 'dca', 'DCAR_014289' => 'dca', 'DCAR_014795' => 'dca', 'DCAR_017827' => 'dca', 'DCAR_020640' => 'dca', 'Dinv03539' => 'din', 'Dinv03541' => 'din', 'Dinv14565' => 'din', 'Dinv18589' => 'din', 'Dinv27378' => 'din', 'Dinv36545' => 'din', 'Dinv37029' => 'din', 'Dinv44181' => 'din', 'Duzib041G0012' => 'dzi', 'Duzib093G1979' => 'dzi', 'Duzib116G0574' => 'dzi', 'Duzib128G0676' => 'dzi', 'Duzib150G0417' => 'dzi', 'Duzib168G1010' => 'dzi', 'Duzib168G1935' => 'dzi', 'Duzib177G0020' => 'dzi', 'ECA232G3064' => 'eca', 'ECA236G2962' => 'eca', 'ECA240G1046' => 'eca', 'ECA248G0272' => 'eca', 'EL10Ac1g00033' => 'bvu', 'EL10Ac4g08779' => 'bvu', 'EL10Ac5g11675' => 'bvu', 'EL10Ac6g14816' => 'bvu', 'EL10Ac7g16234' => 'bvu', 'EL10Ac8g18618' => 'bvu', 'Eucgr.B03792' => 'egr', 'Eucgr.C01134' => 'egr', 'Eucgr.F03744' => 'egr', 'Eucgr.G02644' => 'egr', 'Eucgr.G02645' => 'egr', 'Eucgr.G02646' => 'egr', 'Eucgr.G02647' => 'egr', 'Eucgr.G02648' => 'egr', 'Eucgr.K01543' => 'egr', 'Eucgr.L01814' => 'egr', 'Eucgr.L01815' => 'egr', 'Eucgr.L02937' => 'egr', 'FAN04G1553' => 'fan', 'FAN08G0223' => 'fan', 'FAN11G0376' => 'fan', 'FAN13G1442' => 'fan', 'FAN16G3302' => 'fan', 'FAN18G4378' => 'fan', 'FAN19G0775' => 'fan', 'FAN19G2791' => 'fan', 'FAN23G0118' => 'fan', 'FAN23G2794' => 'fan', 'FAN25G0542' => 'fan', 'FAN26G2078' => 'fan', 'FAN26G2816' => 'fan', 'FAN28G2833' => 'fan', 'FvH4_1g03580' => 'fve', 'FvH4_1g29800' => 'fve', 'FvH4_3g27250' => 'fve', 'FvH4_5g39010' => 'fve', 'Glyma.03G006900' => 'gma', 'Glyma.05G008100' => 'gma', 'Glyma.06G109200' => 'gma', 'Glyma.06G109250' => 'gma', 'Glyma.08G228300' => 'gma', 'Glyma.13G084000' => 'gma', 'Glyma.14G164900' => 'gma', 'Glyma.14G165000' => 'gma', 'Glyma.15G220800' => 'gma', 'Glyma.17G116400' => 'gma', 'Glyma.19G119000' => 'gma', 'Glyma.20G057600' => 'gma', 'Gohir.A01G187900' => 'ghi', 'Gohir.A02G074700' => 'ghi', 'Gohir.A06G057300' => 'ghi', 'Gohir.A08G053050' => 'ghi', 'Gohir.A08G220900' => 'ghi', 'Gohir.A09G105000' => 'ghi', 'Gohir.A11G226400' => 'ghi', 'Gohir.A11G227100' => 'ghi', 'Gohir.D01G181700' => 'ghi', 'Gohir.D02G081700' => 'ghi', 'Gohir.D04G151650' => 'ghi', 'Gohir.D06G055600' => 'ghi', 'Gohir.D08G062600' => 'ghi', 'Gohir.D08G237500' => 'ghi', 'Gohir.D08G237600' => 'ghi', 'Gohir.D08G259950' => 'ghi', 'Gohir.D09G101700' => 'ghi', 'Gohir.D11G201566' => 'ghi', 'Gohir.D11G239400' => 'ghi', 'Gohir.D11G239450' => 'ghi', 'Gohir.D11G239500' => 'ghi', 'Gorai.002G220700' => 'gra', 'Gorai.004G064800' => 'gra', 'Gorai.004G253100' => 'gra', 'Gorai.004G277800' => 'gra', 'Gorai.005G091600' => 'gra', 'Gorai.006G119100' => 'gra', 'Gorai.007G252900' => 'gra', 'Gorai.007G253000' => 'gra', 'Gorai.007G253100' => 'gra', 'Gorai.010G064900' => 'gra', 'Gorai.012G138400' => 'gra', 'GSVIVG01008935001' => 'vvi', 'GSVIVG01015504001' => 'vvi', 'GSVIVG01027210001' => 'vvi', 'GSVIVG01029937001' => 'vvi', 'GSVIVG01037441001' => 'vvi', 'HanXRQChr04g0125521' => 'han', 'HanXRQChr06g0178121' => 'han', 'HanXRQChr09g0257821' => 'han', 'HanXRQChr12g0356351' => 'han', 'HanXRQChr12g0376121' => 'han', 'HanXRQChr13g0406471' => 'han', 'HanXRQChr15g0487461' => 'han', 'Haze_00518' => 'cav', 'Haze_03408' => 'cav', 'Haze_15953' => 'cav', 'Haze_15954' => 'cav', 'Haze_15955' => 'cav', 'Haze_20388' => 'cav', 'Haze_23637' => 'cav', 'Haze_27739' => 'cav', 'Hma1.2p1_0151F.1_g067440' => 'hma', 'Hma1.2p1_0188F.1_g082470' => 'hma', 'Hma1.2p1_0665F.1_g199140' => 'hma', 'Hma1.2p1_1544F.1_g289890' => 'hma', 'HPP92_000789' => 'vpl', 'HPP92_000811' => 'vpl', 'HPP92_005148' => 'vpl', 'HPP92_010974' => 'vpl', 'HPP92_010975' => 'vpl', 'Hund09143' => 'sun', 'Hund16825' => 'sun', 'Hund20977' => 'sun', 'Hund27052' => 'sun', 'Lalb_Chr07g0178811' => 'lal', 'Lalb_Chr08g0241671' => 'lal', 'Lalb_Chr12g0197821' => 'lal', 'Lalb_Chr14g0364971' => 'lal', 'Lalb_Chr19g0132521' => 'lal', 'Lalb_Chr22g0358461' => 'lal', 'Lj1C1069G3' => 'lonja', 'Lj1g0009233' => 'lja', 'Lj1g0019275' => 'lja', 'Lj2C908G4' => 'lonja', 'Lj3g0010071' => 'lja', 'Lj4A40T47' => 'lonja', 'Lj4C40T2' => 'lonja', 'Lj4g0001261' => 'lja', 'Lj7A494G41' => 'lonja', 'Lj7A494T47' => 'lonja', 'Lj7A632G43' => 'lonja', 'Lj7A632G44' => 'lonja', 'Lj7C216T0' => 'lonja', 'Lj7C308T0' => 'lonja', 'Lsat_1_v5_gn_2_95180' => 'lsa', 'Lsat_1_v5_gn_4_177141' => 'lsa', 'Lsat_1_v5_gn_4_23940' => 'lsa', 'Lsat_1_v5_gn_5_154461' => 'lsa', 'Lsat_1_v5_gn_5_97060' => 'lsa', 'Lsat_1_v5_gn_7_94901' => 'lsa', 'Lsat_1_v5_gn_8_106740' => 'lsa', 'Manes.04G055700' => 'mes', 'Manes.06G049900' => 'mes', 'Manes.09G135900' => 'mes', 'Manes.14G130700' => 'mes', 'Manes.18G073250' => 'mes', 'Manes.S076800' => 'mes', 'Mapoly0013s0176' => 'mpo', 'Mapoly0023s0052' => 'mpo', 'Mapoly0086s0054' => 'mpo', 'Mapoly0097s0074' => 'mpo', 'MBI03_g11129_MAGBIO' => 'mbi', 'MBI03_g11130_MAGBIO' => 'mbi', 'MBI03_g11150_MAGBIO' => 'mbi', 'MBI13_g41273_MAGBIO' => 'mbi', 'MBI19_g01934_MAGBIO' => 'mbi', 'MBI19_g34089_MAGBIO' => 'mbi', 'MCO01G186' => 'mco', 'MCO02G435' => 'mco', 'MCO04G054' => 'mco', 'MCO04G200' => 'mco', 'MCO12G322' => 'mco', 'MD00G1107200' => 'mdo', 'MD02G1035100' => 'mdo', 'MD08G1172400' => 'mdo', 'MD12G1013300' => 'mdo', 'MD14G1010800' => 'mdo', 'MD15G1357900' => 'mdo', 'Medtr3g073150' => 'mtr', 'Medtr3g073180' => 'mtr', 'Medtr3g079510' => 'mtr', 'Medtr3g479590' => 'mtr', 'Medtr4g113900' => 'mtr', 'Medtr4g114030' => 'mtr', 'Medtr5g059820' => 'mtr', 'Medtr7g087090' => 'mtr', 'Medtr8g044160' => 'mtr', 'MELO3C004519.2' => 'cme', 'MELO3C009710.2' => 'cme', 'MELO3C010444.2' => 'cme', 'MELO3C014713.2' => 'cme', 'MELO3C019165.2' => 'cme', 'MELO3C022772.2' => 'cme', 'Migut.C01185' => 'egut', 'Migut.J01170' => 'egut', 'Migut.J01171' => 'egut', 'Migut.J01536' => 'egut', 'Migut.K00216' => 'egut', 'MSTRG.10752' => 'ama', 'MSTRG.19606' => 'ama', 'MSTRG.19731' => 'ama', 'MSTRG.25413' => 'ama', 'MSTRG.26206' => 'ama', 'MSTRG.6252' => 'ama', 'Nitab4.5_0000613g0050' => 'nta', 'Nitab4.5_0001141g0010' => 'nta', 'Nitab4.5_0001438g0140' => 'nta', 'Nitab4.5_0001623g0020' => 'nta', 'Nitab4.5_0002857g0010' => 'nta', 'Nitab4.5_0003302g0080' => 'nta', 'Nitab4.5_0004148g0070' => 'nta', 'Nitab4.5_0004801g0060' => 'nta', 'Nitab4.5_0023821g0010' => 'nta', 'Nn1g08621' => 'nnu', 'Nn4g25004' => 'nnu', 'Nn5g28059' => 'nnu', 'Nn7g37933' => 'nnu', 'Nn8g39389' => 'nnu', 'Nn8g39580' => 'nnu', 'Oeu029774.2' => 'oeu', 'Oeu032948.1' => 'oeu', 'Oeu032949.1' => 'oeu', 'Oeu032964.2' => 'oeu', 'Oeu043787.1' => 'oeu', 'Oeu043957.1' => 'oeu', 'Oeu044205.1' => 'oeu', 'Oeu050263.1' => 'oeu', 'Oeu058057.2' => 'oeu', 'Oeu058063.1' => 'oeu', 'Os01g0174300' => 'osa', 'Os01g0814900' => 'osa', 'Os02g0770800' => 'osa', 'Os05g0488900' => 'osa', 'Os08g0468100' => 'osa', 'Os08g0468700' => 'osa', 'Peaxi162Scf00004g00362' => 'pax', 'Peaxi162Scf00063g00121' => 'pax', 'Peaxi162Scf00343g00049' => 'pax', 'Peaxi162Scf00369g00064' => 'pax', 'Peaxi162Scf00369g00065' => 'pax', 'Peaxi162Scf00476g00046' => 'pax', 'Peaxi162Scf00476g00632' => 'pax', 'Peaxi162Scf00575g00039' => 'pax', 'Peaxi162Scf00958g00036' => 'pax', 'Peaxi162Scf00958g00037' => 'pax', 'Peaxi162Scf01400g00021' => 'pax', 'PGR042G3238' => 'pgr', 'PGR044G1193' => 'pgr', 'PGR102G2134' => 'pgr', 'PGR102G3364' => 'pgr', 'PGR142G1426' => 'pgr', 'PGR142G2734' => 'pgr', 'PGSC0003DMG400028214' => 'stu', 'PGSC0003DMG400030212' => 'stu', 'Phvul.001G107300' => 'pvu', 'Phvul.003G162900' => 'pvu', 'Phvul.008G168000' => 'pvu', 'Phvul.009G121000' => 'pvu', 'Phvul.011G187800' => 'pvu', 'Potri.002G088600' => 'ptr', 'Potri.004G194400' => 'ptr', 'Potri.005G172400' => 'ptr', 'Potri.006G218600' => 'ptr', 'Potri.007G072750' => 'ptr', 'Potri.009G157000' => 'ptr', 'Potri.010G246800' => 'ptr', 'Potri.013G067300' => 'ptr', 'Potri.015G068500' => 'ptr', 'Pp3c10_9540' => 'ppa', 'Pp3c10_9670' => 'ppa', 'Pp3c14_9410' => 'ppa', 'Pp3c1_15390' => 'ppa', 'Pp3c2_21100' => 'ppa', 'Pp3c4_18080' => 'ppa', 'Pp3c6_18860' => 'ppa', 'PRCOL_00000542' => 'pco', 'PRCOL_00001335' => 'pco', 'PRCOL_00003047' => 'pco', 'PRCOL_00004551' => 'pco', 'PRCOL_00004594' => 'pco', 'PRCOL_00005404' => 'pco', 'Prupe.1G505400' => 'ppe', 'Prupe.6G154300' => 'ppe', 'Prupe.7G017700' => 'ppe', 'Prupe.7G239800' => 'ppe', 'Psat0s3059g0080' => 'psa', 'Psat2g077040' => 'psa', 'Psat3g085480' => 'psa', 'Psat4g040440' => 'psa', 'Psat5g112400' => 'psa', 'Psat5g134440' => 'psa', 'PSO170G4324' => 'pso', 'PSO170G5562' => 'pso', 'PSO339G0893' => 'pso', 'PSO384G4743' => 'pso', 'PSO455G0024' => 'pso', 'PSO455G0205' => 'pso', 'PSO528G0278' => 'pso', 'QL01p020512' => 'qlo', 'QL02p087833' => 'qlo', 'QL04p050355' => 'qlo', 'QL04p050360' => 'qlo', 'QL04p050375' => 'qlo', 'QL07p016696' => 'qlo', 'QL09p037275' => 'qlo', 'RcHm_v2.0_Chr1g0371001' => 'rch', 'RcHm_v2.0_Chr2g0089111' => 'rch', 'RcHm_v2.0_Chr3g0485111' => 'rch', 'RcHm_v2.0_Chr3g0495881' => 'rch', 'RcHm_v2.0_Chr5g0049861' => 'rch', 'RcHm_v2.0_Chr7g0240971' => 'rch', 'Rhsim01G0076500' => 'rsi', 'Rhsim03G0046200' => 'rsi', 'Rhsim06G0108700' => 'rsi', 'Rhsim06G0108800' => 'rsi', 'Rhsim08G0072000' => 'rsi', 'Rhsim08G0072100' => 'rsi', 'Rhsim13G0200400' => 'rsi', 'Sabra02G0069800' => 'sbr', 'Sabra05G0130000' => 'sbr', 'Sabra06G0168500' => 'sbr', 'Sabra09G0122800' => 'sbr', 'Sabra10G0192300' => 'sbr', 'Sabra13G0058700' => 'sbr', 'SalBow7G1618' => 'sbo', 'SalBow7G4024' => 'sbo', 'Sc01g0001500' => 'sci', 'Sc07g0007650' => 'sci', 'Sc18g0000690' => 'sci', 'Sed0004027' => 'sed', 'Sed0004439' => 'sed', 'Sed0010585' => 'sed', 'Sed0014084' => 'sed', 'Sed0017233' => 'sed', 'Sed0018365' => 'sed', 'Sed0022627' => 'sed', 'Sed0025281' => 'sed', 'SEGI_07411' => 'sgi', 'SEGI_18220' => 'sgi', 'SEGI_20596' => 'sgi', 'SGA_v2.0_scaffold17G07978' => 'sas', 'SGA_v2.0_scaffold229G43326' => 'sas', 'SGA_v2.0_scaffold45G17070' => 'sas', 'SGA_v2.0_scaffold52G19019' => 'sas', 'SGA_v2.0_scaffold66G22378' => 'sas', 'SGA_v2.0_scaffold69G23220' => 'sas', 'SHI14863' => 'shi', 'SHI14864' => 'shi', 'SMO134G0168' => 'smo', 'SMO331G0069' => 'smo', 'Solyc05g018520.3' => 'sly', 'Solyc10g081440.2' => 'sly', 'Solyc11g013810.3' => 'sly', 'Sopen05g015640' => 'spe', 'Sopen10g031940' => 'spe', 'Sopen11g008740' => 'spe', 'Sp1g31260' => 'spa', 'Sp5g32930' => 'spa', 'Sp6g24330' => 'spa', 'Sp6g26480' => 'spa', 'TAR623G0776' => 'tar', 'TAR624G1222' => 'tar', 'TAR625G0129' => 'tar', 'TAR628G1493' => 'tar', 'TAR633G2746' => 'tar', 'TAR636G0812' => 'tar', 'THA.LOC104798845' => 'tha', 'THA.LOC104799648' => 'tha', 'THA.LOC104813138' => 'tha', 'THA.LOC104813644' => 'tha', 'THA.LOC104817024' => 'tha', 'THA.LOC104820801' => 'tha', 'Thecc.05G239600' => 'tca', 'Thecc.08G117500' => 'tca', 'Thecc.09G123300' => 'tca', 'Thecc.09G263700' => 'tca', 'Thhalv10003628m.g' => 'esa', 'Thhalv10014199m.g' => 'esa', 'Thhalv10014327m.g' => 'esa', 'Thhalv10018092m.g' => 'esa', 'TPR.G32932' => 'tpr', 'TPR.G32938' => 'tpr', 'TPR.G32951' => 'tpr', 'TPR.G35748' => 'tpr', 'TPR.G37984' => 'tpr', 'TPR.G7839' => 'tpr', 'TPR.G8508' => 'tpr', 'TWI32G0011' => 'twi', 'TWI34G0260' => 'twi', 'TWI56G0099' => 'twi', 'TWI60G0536' => 'twi', 'TWI63G0382' => 'twi', 'TWI79G0752' => 'twi', 'unitig_21.g20659' => 'ugi', 'unitig_699.g19212' => 'ugi', 'unitig_744.g23958' => 'ugi', 'vmacro04069' => 'vma', 'vmacro04070' => 'vma', 'vmacro07640' => 'vma', 'vmacro12531' => 'vma', 'vmacro20489' => 'vma', 'vmacro20598' => 'vma', 'VMungo0647G0621' => 'vmu', 'VMungo1127G1753' => 'vmu', 'VMungo1215G2224' => 'vmu', 'VMungo1309G2713' => 'vmu', 'VMungo1383G1796' => 'vmu', 'Zm00001eb037860' => 'zma', 'Zm00001eb082240' => 'zma', 'Zm00001eb122720' => 'zma', 'Zm00001eb149860' => 'zma', 'Zm00001eb152720' => 'zma', 'Zm00001eb176470' => 'zma', 'Zm00001eb193390' => 'zma', 'Zm00001eb209630' => 'zma', 'Zm00001eb213470' => 'zma', 'Zm00001eb245550' => 'zma', 'Zm00001eb256260' => 'zma', 'Zm00001eb291160' => 'zma', 'Zm00001eb346170' => 'zma', 'Zm00001eb390110' => 'zma', 'Zm00001eb425210' => 'zma', 'Zm00001eb429490' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D000951', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000951' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D000951', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '631', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000951' ) ), 'genes' => array( 'A02p04440' => 'bna', 'A02p21820' => 'bna', 'A02p21830' => 'bna', 'A03p08480' => 'bna', 'A07p15250' => 'bna', 'A07p27850' => 'bna', 'A07p43060' => 'bna', 'A10p21680' => 'bna', 'Aa31LG11G11810' => 'aar', 'Aa31LG4G7870' => 'aar', 'Aa31LG6G8050' => 'aar', 'Aa31LG6G9110' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.2307' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3621' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5248' => 'aag', 'Actinidia02592' => 'ach', 'Actinidia18376' => 'ach', 'Actinidia22002' => 'ach', 'Actinidia37832' => 'ach', 'Ah.05g172520' => 'amhyb', 'Ah.05g172530' => 'amhyb', 'Ah.06g191190' => 'amhyb', 'Ah.12g061950' => 'amhyb', 'Ah.15g099310' => 'amhyb', 'Ah.16g110180' => 'amhyb', 'AL1G51170' => 'aly', 'AL2G37990' => 'aly', 'AL6G28860' => 'aly', 'AL6G31630' => 'aly', 'Aqoxy1G00099' => 'aox', 'Aqoxy1G04088' => 'aox', 'Aqoxy6G00153' => 'aox', 'Aqoxy7G02098' => 'aox', 'Aqoxy7G02149' => 'aox', 'arahy.Tifrunner.gnm1.ann1.34G2NL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L21K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B1DGRD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B2KMHD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FIU44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9J1TW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y57IDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YZT8QC' => 'arhy', 'AT1G37130' => 'ath', 'AT1G77760' => 'ath', 'AT5G17770' => 'ath', 'AT5G20080' => 'ath', 'ATR0068G079' => 'atr', 'ATR0684G206' => 'atr', 'ATR1156G037' => 'atr', 'Atru.chr13.1323' => 'acertr', 'Atru.chr13.1367' => 'acertr', 'Atru.chr2.1564' => 'acertr', 'Atru.chr3.2915' => 'acertr', 'Atru.chr7.1199' => 'acertr', 'Atru.chr8.893' => 'acertr', 'Atru.chr8.894' => 'acertr', 'AUR62001601' => 'cqu', 'AUR62004699' => 'cqu', 'AUR62011088' => 'cqu', 'AUR62011089' => 'cqu', 'AUR62011110' => 'cqu', 'AUR62011111' => 'cqu', 'AUR62020178' => 'cqu', 'AUR62023616' => 'cqu', 'AUR62033478' => 'cqu', 'AUR62036515' => 'cqu', 'AUR62037059' => 'cqu', 'BcaB01g04810' => 'bca', 'BcaB01g04911' => 'bca', 'BcaB01g05154' => 'bca', 'BcaB02g07129' => 'bca', 'BcaB03g15925' => 'bca', 'BcaB05g23276' => 'bca', 'BcaB05g25075' => 'bca', 'BcaB08g36746' => 'bca', 'BcaC03g13542' => 'bca', 'BcaC03g15090' => 'bca', 'BcaC03g15770' => 'bca', 'BcaC08g45455' => 'bca', 'BolC2t06841H' => 'bol', 'BolC2t07884H' => 'bol', 'BolC2t08722H' => 'bol', 'BolC2t09525H' => 'bol', 'BolC3t13476H' => 'bol', 'BolC6t35954H' => 'bol', 'BolC6t38246H' => 'bol', 'BolC6t40193H' => 'bol', 'BraA02t05408Z' => 'bra', 'BraA02t07185Z' => 'bra', 'BraA03t10171Z' => 'bra', 'BraA07t30424Z' => 'bra', 'BraA07t31827Z' => 'bra', 'C02p09340' => 'bna', 'C02p26490' => 'bna', 'C02p35110' => 'bna', 'C03p09880' => 'bna', 'C06p30820' => 'bna', 'C06p51710' => 'bna', 'C09p66260' => 'bna', 'CAN.G128.141' => 'can', 'CAN.G372.2' => 'can', 'CAN.G44.5' => 'can', 'CAN.G935.7' => 'can', 'CANSAT11G2446' => 'cansat', 'CANSAT25G1717' => 'cansat', 'CANSAT78G1357' => 'cansat', 'CARHR034720' => 'chi', 'CARHR071270' => 'chi', 'CARHR192750' => 'chi', 'CARHR195400' => 'chi', 'Carub.0001s3407' => 'cru', 'Carub.0002s2466' => 'cru', 'Carub.0006s1600' => 'cru', 'Carub.0006s1846' => 'cru', 'Ca_03444_v3' => 'car', 'Ca_12170_v3' => 'car', 'Ca_12848_v3' => 'car', 'Ca_15220_v3' => 'car', 'Ca_16254_v3' => 'car', 'Ca_21695_v3' => 'car', 'CBR_g36815' => 'cbr', 'CBR_g36817' => 'cbr', 'CBR_g4013' => 'cbr', 'CBR_g45637' => 'cbr', 'CBR_g46196' => 'cbr', 'CBR_g46198' => 'cbr', 'CBR_g46200' => 'cbr', 'CBR_g46898' => 'cbr', 'Cc00_g12040' => 'ccan', 'Cc06_g08770' => 'ccan', 'Cc06_g21550' => 'ccan', 'Cc10_g14390' => 'ccan', 'CDE02G2349' => 'cde', 'CDE04G2035' => 'cde', 'CDE06G0176' => 'cde', 'CDE06G2658' => 'cde', 'Cfa010247' => 'cfa', 'Cfa010454' => 'cfa', 'Cfa015964' => 'cfa', 'Cfa019869' => 'cfa', 'Cfa022855' => 'cfa', 'Cfa025215' => 'cfa', 'Cfa026789' => 'cfa', 'Cfa026899' => 'cfa', 'Cfa027359' => 'cfa', 'Ciclev10000220m.g' => 'ccl', 'Ciclev10008900m.g' => 'ccl', 'Ciclev10018119m.g' => 'ccl', 'Ciclev10018210m.g' => 'ccl', 'Ciclev10032349m.g' => 'ccl', 'CiPaw.03G242000' => 'cil', 'CiPaw.05G228100' => 'cil', 'CiPaw.06G025400' => 'cil', 'CiPaw.09G165700' => 'cil', 'CiPaw.13G047000' => 'cil', 'CiPaw.13G127400' => 'cil', 'ClCG02G024270' => 'cla', 'ClCG03G009280' => 'cla', 'ClCG03G009290' => 'cla', 'ClCG04G005060' => 'cla', 'ClCG10G016650' => 'cla', 'ClCG11G002910' => 'cla', 'ClCG11G015520' => 'cla', 'COL.COLO4_05763' => 'col', 'COL.COLO4_06727' => 'col', 'COL.COLO4_25291' => 'col', 'COL.COLO4_32799' => 'col', 'Cpa.g.c35493' => 'cpa', 'Cpa.g.sc49.137' => 'cpa', 'Cpa.g.sc73.10' => 'cpa', 'Cre03.g145547' => 'cre', 'Cre06.g303050' => 'cre', 'Cre09.g410950' => 'cre', 'Cre11.g481126' => 'cre', 'CsaV3_2G002740' => 'csa', 'CsaV3_2G026760' => 'csa', 'CsaV3_2G026770' => 'csa', 'CsaV3_2G026780' => 'csa', 'CsaV3_3G039690' => 'csa', 'CsaV3_4G017410' => 'csa', 'CsaV3_4G028560' => 'csa', 'CsaV3_4G029030' => 'csa', 'CsaV3_5G023350' => 'csa', 'CsaV3_5G023360' => 'csa', 'CsaV3_5G023370' => 'csa', 'CSS0016952' => 'camsi', 'CSS0027199' => 'camsi', 'CSS0031990' => 'camsi', 'CSS0033298' => 'camsi', 'CSS0047384' => 'camsi', 'CSS0049606' => 'camsi', 'DCAR_000386' => 'dca', 'DCAR_009200' => 'dca', 'DCAR_013497' => 'dca', 'DCAR_014288' => 'dca', 'DCAR_014289' => 'dca', 'DCAR_014795' => 'dca', 'DCAR_017827' => 'dca', 'DCAR_020640' => 'dca', 'Dinv03539' => 'din', 'Dinv03541' => 'din', 'Dinv14565' => 'din', 'Dinv18589' => 'din', 'Dinv27378' => 'din', 'Dinv36545' => 'din', 'Dinv37029' => 'din', 'Dinv44181' => 'din', 'Duzib041G0012' => 'dzi', 'Duzib093G1979' => 'dzi', 'Duzib116G0574' => 'dzi', 'Duzib128G0676' => 'dzi', 'Duzib150G0417' => 'dzi', 'Duzib168G1010' => 'dzi', 'Duzib168G1935' => 'dzi', 'Duzib177G0020' => 'dzi', 'ECA232G3064' => 'eca', 'ECA236G2962' => 'eca', 'ECA240G1046' => 'eca', 'ECA248G0272' => 'eca', 'EL10Ac1g00033' => 'bvu', 'EL10Ac4g08779' => 'bvu', 'EL10Ac5g11675' => 'bvu', 'EL10Ac6g14816' => 'bvu', 'EL10Ac7g16234' => 'bvu', 'EL10Ac8g18618' => 'bvu', 'Eucgr.B03792' => 'egr', 'Eucgr.C01134' => 'egr', 'Eucgr.F03744' => 'egr', 'Eucgr.G02644' => 'egr', 'Eucgr.G02645' => 'egr', 'Eucgr.G02646' => 'egr', 'Eucgr.G02647' => 'egr', 'Eucgr.G02648' => 'egr', 'Eucgr.K01543' => 'egr', 'Eucgr.L01814' => 'egr', 'Eucgr.L01815' => 'egr', 'Eucgr.L02937' => 'egr', 'FAN04G1553' => 'fan', 'FAN08G0223' => 'fan', 'FAN11G0376' => 'fan', 'FAN13G1442' => 'fan', 'FAN16G3302' => 'fan', 'FAN18G4378' => 'fan', 'FAN19G0775' => 'fan', 'FAN19G2791' => 'fan', 'FAN23G0118' => 'fan', 'FAN23G2794' => 'fan', 'FAN25G0542' => 'fan', 'FAN26G2078' => 'fan', 'FAN26G2816' => 'fan', 'FAN28G2833' => 'fan', 'FvH4_1g03580' => 'fve', 'FvH4_1g29800' => 'fve', 'FvH4_3g27250' => 'fve', 'FvH4_5g39010' => 'fve', 'Glyma.03G006900' => 'gma', 'Glyma.05G008100' => 'gma', 'Glyma.06G109200' => 'gma', 'Glyma.06G109250' => 'gma', 'Glyma.08G228300' => 'gma', 'Glyma.13G084000' => 'gma', 'Glyma.14G164900' => 'gma', 'Glyma.14G165000' => 'gma', 'Glyma.15G220800' => 'gma', 'Glyma.17G116400' => 'gma', 'Glyma.19G119000' => 'gma', 'Glyma.20G057600' => 'gma', 'Gohir.A01G187900' => 'ghi', 'Gohir.A02G074700' => 'ghi', 'Gohir.A06G057300' => 'ghi', 'Gohir.A08G053050' => 'ghi', 'Gohir.A08G220900' => 'ghi', 'Gohir.A09G105000' => 'ghi', 'Gohir.A11G226400' => 'ghi', 'Gohir.A11G227100' => 'ghi', 'Gohir.D01G181700' => 'ghi', 'Gohir.D02G081700' => 'ghi', 'Gohir.D04G151650' => 'ghi', 'Gohir.D06G055600' => 'ghi', 'Gohir.D08G062600' => 'ghi', 'Gohir.D08G237500' => 'ghi', 'Gohir.D08G237600' => 'ghi', 'Gohir.D08G259950' => 'ghi', 'Gohir.D09G101700' => 'ghi', 'Gohir.D11G201566' => 'ghi', 'Gohir.D11G239400' => 'ghi', 'Gohir.D11G239450' => 'ghi', 'Gohir.D11G239500' => 'ghi', 'Gorai.002G220700' => 'gra', 'Gorai.004G064800' => 'gra', 'Gorai.004G253100' => 'gra', 'Gorai.004G277800' => 'gra', 'Gorai.005G091600' => 'gra', 'Gorai.006G119100' => 'gra', 'Gorai.007G252900' => 'gra', 'Gorai.007G253000' => 'gra', 'Gorai.007G253100' => 'gra', 'Gorai.010G064900' => 'gra', 'Gorai.012G138400' => 'gra', 'GSVIVG01008935001' => 'vvi', 'GSVIVG01015504001' => 'vvi', 'GSVIVG01027210001' => 'vvi', 'GSVIVG01029937001' => 'vvi', 'GSVIVG01037441001' => 'vvi', 'HanXRQChr04g0125521' => 'han', 'HanXRQChr06g0178121' => 'han', 'HanXRQChr09g0257821' => 'han', 'HanXRQChr12g0356351' => 'han', 'HanXRQChr12g0376121' => 'han', 'HanXRQChr13g0406471' => 'han', 'HanXRQChr15g0487461' => 'han', 'Haze_00518' => 'cav', 'Haze_03408' => 'cav', 'Haze_15953' => 'cav', 'Haze_15954' => 'cav', 'Haze_15955' => 'cav', 'Haze_20388' => 'cav', 'Haze_23637' => 'cav', 'Haze_27739' => 'cav', 'Hma1.2p1_0151F.1_g067440' => 'hma', 'Hma1.2p1_0188F.1_g082470' => 'hma', 'Hma1.2p1_0665F.1_g199140' => 'hma', 'Hma1.2p1_1544F.1_g289890' => 'hma', 'HPP92_000789' => 'vpl', 'HPP92_000811' => 'vpl', 'HPP92_005148' => 'vpl', 'HPP92_010974' => 'vpl', 'HPP92_010975' => 'vpl', 'Hund09143' => 'sun', 'Hund16825' => 'sun', 'Hund20977' => 'sun', 'Hund27052' => 'sun', 'Lalb_Chr07g0178811' => 'lal', 'Lalb_Chr08g0241671' => 'lal', 'Lalb_Chr12g0197821' => 'lal', 'Lalb_Chr14g0364971' => 'lal', 'Lalb_Chr19g0132521' => 'lal', 'Lalb_Chr22g0358461' => 'lal', 'Lj1C1069G3' => 'lonja', 'Lj1g0009233' => 'lja', 'Lj1g0019275' => 'lja', 'Lj2C908G4' => 'lonja', 'Lj3g0010071' => 'lja', 'Lj4A40T47' => 'lonja', 'Lj4C40T2' => 'lonja', 'Lj4g0001261' => 'lja', 'Lj7A494G41' => 'lonja', 'Lj7A494T47' => 'lonja', 'Lj7A632G43' => 'lonja', 'Lj7A632G44' => 'lonja', 'Lj7C216T0' => 'lonja', 'Lj7C308T0' => 'lonja', 'Lsat_1_v5_gn_2_95180' => 'lsa', 'Lsat_1_v5_gn_4_177141' => 'lsa', 'Lsat_1_v5_gn_4_23940' => 'lsa', 'Lsat_1_v5_gn_5_154461' => 'lsa', 'Lsat_1_v5_gn_5_97060' => 'lsa', 'Lsat_1_v5_gn_7_94901' => 'lsa', 'Lsat_1_v5_gn_8_106740' => 'lsa', 'Manes.04G055700' => 'mes', 'Manes.06G049900' => 'mes', 'Manes.09G135900' => 'mes', 'Manes.14G130700' => 'mes', 'Manes.18G073250' => 'mes', 'Manes.S076800' => 'mes', 'Mapoly0013s0176' => 'mpo', 'Mapoly0023s0052' => 'mpo', 'Mapoly0086s0054' => 'mpo', 'Mapoly0097s0074' => 'mpo', 'MBI03_g11129_MAGBIO' => 'mbi', 'MBI03_g11130_MAGBIO' => 'mbi', 'MBI03_g11150_MAGBIO' => 'mbi', 'MBI13_g41273_MAGBIO' => 'mbi', 'MBI19_g01934_MAGBIO' => 'mbi', 'MBI19_g34089_MAGBIO' => 'mbi', 'MCO01G186' => 'mco', 'MCO02G435' => 'mco', 'MCO04G054' => 'mco', 'MCO04G200' => 'mco', 'MCO12G322' => 'mco', 'MD00G1107200' => 'mdo', 'MD02G1035100' => 'mdo', 'MD08G1172400' => 'mdo', 'MD12G1013300' => 'mdo', 'MD14G1010800' => 'mdo', 'MD15G1357900' => 'mdo', 'Medtr3g073150' => 'mtr', 'Medtr3g073180' => 'mtr', 'Medtr3g079510' => 'mtr', 'Medtr3g479590' => 'mtr', 'Medtr4g113900' => 'mtr', 'Medtr4g114030' => 'mtr', 'Medtr5g059820' => 'mtr', 'Medtr7g087090' => 'mtr', 'Medtr8g044160' => 'mtr', 'MELO3C004519.2' => 'cme', 'MELO3C009710.2' => 'cme', 'MELO3C010444.2' => 'cme', 'MELO3C014713.2' => 'cme', 'MELO3C019165.2' => 'cme', 'MELO3C022772.2' => 'cme', 'Migut.C01185' => 'egut', 'Migut.J01170' => 'egut', 'Migut.J01171' => 'egut', 'Migut.J01536' => 'egut', 'Migut.K00216' => 'egut', 'MSTRG.10752' => 'ama', 'MSTRG.19606' => 'ama', 'MSTRG.19731' => 'ama', 'MSTRG.25413' => 'ama', 'MSTRG.26206' => 'ama', 'MSTRG.6252' => 'ama', 'Nitab4.5_0000613g0050' => 'nta', 'Nitab4.5_0001141g0010' => 'nta', 'Nitab4.5_0001438g0140' => 'nta', 'Nitab4.5_0001623g0020' => 'nta', 'Nitab4.5_0002857g0010' => 'nta', 'Nitab4.5_0003302g0080' => 'nta', 'Nitab4.5_0004148g0070' => 'nta', 'Nitab4.5_0004801g0060' => 'nta', 'Nitab4.5_0023821g0010' => 'nta', 'Nn1g08621' => 'nnu', 'Nn4g25004' => 'nnu', 'Nn5g28059' => 'nnu', 'Nn7g37933' => 'nnu', 'Nn8g39389' => 'nnu', 'Nn8g39580' => 'nnu', 'Oeu029774.2' => 'oeu', 'Oeu032948.1' => 'oeu', 'Oeu032949.1' => 'oeu', 'Oeu032964.2' => 'oeu', 'Oeu043787.1' => 'oeu', 'Oeu043957.1' => 'oeu', 'Oeu044205.1' => 'oeu', 'Oeu050263.1' => 'oeu', 'Oeu058057.2' => 'oeu', 'Oeu058063.1' => 'oeu', 'Os01g0174300' => 'osa', 'Os01g0814900' => 'osa', 'Os02g0770800' => 'osa', 'Os05g0488900' => 'osa', 'Os08g0468100' => 'osa', 'Os08g0468700' => 'osa', 'Peaxi162Scf00004g00362' => 'pax', 'Peaxi162Scf00063g00121' => 'pax', 'Peaxi162Scf00343g00049' => 'pax', 'Peaxi162Scf00369g00064' => 'pax', 'Peaxi162Scf00369g00065' => 'pax', 'Peaxi162Scf00476g00046' => 'pax', 'Peaxi162Scf00476g00632' => 'pax', 'Peaxi162Scf00575g00039' => 'pax', 'Peaxi162Scf00958g00036' => 'pax', 'Peaxi162Scf00958g00037' => 'pax', 'Peaxi162Scf01400g00021' => 'pax', 'PGR042G3238' => 'pgr', 'PGR044G1193' => 'pgr', 'PGR102G2134' => 'pgr', 'PGR102G3364' => 'pgr', 'PGR142G1426' => 'pgr', 'PGR142G2734' => 'pgr', 'PGSC0003DMG400028214' => 'stu', 'PGSC0003DMG400030212' => 'stu', 'Phvul.001G107300' => 'pvu', 'Phvul.003G162900' => 'pvu', 'Phvul.008G168000' => 'pvu', 'Phvul.009G121000' => 'pvu', 'Phvul.011G187800' => 'pvu', 'Potri.002G088600' => 'ptr', 'Potri.004G194400' => 'ptr', 'Potri.005G172400' => 'ptr', 'Potri.006G218600' => 'ptr', 'Potri.007G072750' => 'ptr', 'Potri.009G157000' => 'ptr', 'Potri.010G246800' => 'ptr', 'Potri.013G067300' => 'ptr', 'Potri.015G068500' => 'ptr', 'Pp3c10_9540' => 'ppa', 'Pp3c10_9670' => 'ppa', 'Pp3c14_9410' => 'ppa', 'Pp3c1_15390' => 'ppa', 'Pp3c2_21100' => 'ppa', 'Pp3c4_18080' => 'ppa', 'Pp3c6_18860' => 'ppa', 'PRCOL_00000542' => 'pco', 'PRCOL_00001335' => 'pco', 'PRCOL_00003047' => 'pco', 'PRCOL_00004551' => 'pco', 'PRCOL_00004594' => 'pco', 'PRCOL_00005404' => 'pco', 'Prupe.1G505400' => 'ppe', 'Prupe.6G154300' => 'ppe', 'Prupe.7G017700' => 'ppe', 'Prupe.7G239800' => 'ppe', 'Psat0s3059g0080' => 'psa', 'Psat2g077040' => 'psa', 'Psat3g085480' => 'psa', 'Psat4g040440' => 'psa', 'Psat5g112400' => 'psa', 'Psat5g134440' => 'psa', 'PSO170G4324' => 'pso', 'PSO170G5562' => 'pso', 'PSO339G0893' => 'pso', 'PSO384G4743' => 'pso', 'PSO455G0024' => 'pso', 'PSO455G0205' => 'pso', 'PSO528G0278' => 'pso', 'QL01p020512' => 'qlo', 'QL02p087833' => 'qlo', 'QL04p050355' => 'qlo', 'QL04p050360' => 'qlo', 'QL04p050375' => 'qlo', 'QL07p016696' => 'qlo', 'QL09p037275' => 'qlo', 'RcHm_v2.0_Chr1g0371001' => 'rch', 'RcHm_v2.0_Chr2g0089111' => 'rch', 'RcHm_v2.0_Chr3g0485111' => 'rch', 'RcHm_v2.0_Chr3g0495881' => 'rch', 'RcHm_v2.0_Chr5g0049861' => 'rch', 'RcHm_v2.0_Chr7g0240971' => 'rch', 'Rhsim01G0076500' => 'rsi', 'Rhsim03G0046200' => 'rsi', 'Rhsim06G0108700' => 'rsi', 'Rhsim06G0108800' => 'rsi', 'Rhsim08G0072000' => 'rsi', 'Rhsim08G0072100' => 'rsi', 'Rhsim13G0200400' => 'rsi', 'Sabra02G0069800' => 'sbr', 'Sabra05G0130000' => 'sbr', 'Sabra06G0168500' => 'sbr', 'Sabra09G0122800' => 'sbr', 'Sabra10G0192300' => 'sbr', 'Sabra13G0058700' => 'sbr', 'SalBow7G1618' => 'sbo', 'SalBow7G4024' => 'sbo', 'Sc01g0001500' => 'sci', 'Sc07g0007650' => 'sci', 'Sc18g0000690' => 'sci', 'Sed0004027' => 'sed', 'Sed0004439' => 'sed', 'Sed0010585' => 'sed', 'Sed0014084' => 'sed', 'Sed0017233' => 'sed', 'Sed0018365' => 'sed', 'Sed0022627' => 'sed', 'Sed0025281' => 'sed', 'SEGI_07411' => 'sgi', 'SEGI_18220' => 'sgi', 'SEGI_20596' => 'sgi', 'SGA_v2.0_scaffold17G07978' => 'sas', 'SGA_v2.0_scaffold229G43326' => 'sas', 'SGA_v2.0_scaffold45G17070' => 'sas', 'SGA_v2.0_scaffold52G19019' => 'sas', 'SGA_v2.0_scaffold66G22378' => 'sas', 'SGA_v2.0_scaffold69G23220' => 'sas', 'SHI14863' => 'shi', 'SHI14864' => 'shi', 'SMO134G0168' => 'smo', 'SMO331G0069' => 'smo', 'Solyc05g018520.3' => 'sly', 'Solyc10g081440.2' => 'sly', 'Solyc11g013810.3' => 'sly', 'Sopen05g015640' => 'spe', 'Sopen10g031940' => 'spe', 'Sopen11g008740' => 'spe', 'Sp1g31260' => 'spa', 'Sp5g32930' => 'spa', 'Sp6g24330' => 'spa', 'Sp6g26480' => 'spa', 'TAR623G0776' => 'tar', 'TAR624G1222' => 'tar', 'TAR625G0129' => 'tar', 'TAR628G1493' => 'tar', 'TAR633G2746' => 'tar', 'TAR636G0812' => 'tar', 'THA.LOC104798845' => 'tha', 'THA.LOC104799648' => 'tha', 'THA.LOC104813138' => 'tha', 'THA.LOC104813644' => 'tha', 'THA.LOC104817024' => 'tha', 'THA.LOC104820801' => 'tha', 'Thecc.05G239600' => 'tca', 'Thecc.08G117500' => 'tca', 'Thecc.09G123300' => 'tca', 'Thecc.09G263700' => 'tca', 'Thhalv10003628m.g' => 'esa', 'Thhalv10014199m.g' => 'esa', 'Thhalv10014327m.g' => 'esa', 'Thhalv10018092m.g' => 'esa', 'TPR.G32932' => 'tpr', 'TPR.G32938' => 'tpr', 'TPR.G32951' => 'tpr', 'TPR.G35748' => 'tpr', 'TPR.G37984' => 'tpr', 'TPR.G7839' => 'tpr', 'TPR.G8508' => 'tpr', 'TWI32G0011' => 'twi', 'TWI34G0260' => 'twi', 'TWI56G0099' => 'twi', 'TWI60G0536' => 'twi', 'TWI63G0382' => 'twi', 'TWI79G0752' => 'twi', 'unitig_21.g20659' => 'ugi', 'unitig_699.g19212' => 'ugi', 'unitig_744.g23958' => 'ugi', 'vmacro04069' => 'vma', 'vmacro04070' => 'vma', 'vmacro07640' => 'vma', 'vmacro12531' => 'vma', 'vmacro20489' => 'vma', 'vmacro20598' => 'vma', 'VMungo0647G0621' => 'vmu', 'VMungo1127G1753' => 'vmu', 'VMungo1215G2224' => 'vmu', 'VMungo1309G2713' => 'vmu', 'VMungo1383G1796' => 'vmu', 'Zm00001eb037860' => 'zma', 'Zm00001eb082240' => 'zma', 'Zm00001eb122720' => 'zma', 'Zm00001eb149860' => 'zma', 'Zm00001eb152720' => 'zma', 'Zm00001eb176470' => 'zma', 'Zm00001eb193390' => 'zma', 'Zm00001eb209630' => 'zma', 'Zm00001eb213470' => 'zma', 'Zm00001eb245550' => 'zma', 'Zm00001eb256260' => 'zma', 'Zm00001eb291160' => 'zma', 'Zm00001eb346170' => 'zma', 'Zm00001eb390110' => 'zma', 'Zm00001eb425210' => 'zma', 'Zm00001eb429490' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D000951' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000951' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D000951' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000951' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151