Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold450G51801 Striga asiatica HOM05D011272 ORTHO05D010636 2.2e-87 325.5 153 100.0
SGA_v2.0_scaffold11G05618 Striga asiatica HOM05D011272 ORTHO05D010636 1.2e-48 196.8 89 100.0
SGA_v2.0_scaffold146G36167 Striga asiatica HOM05D011272 ORTHO05D010636 2.0e-35 152.9 77 90.9
SGA_v2.0_scaffold80G25964 Striga asiatica HOM05D011272 ORTHO05D010636 1.1e-30 137.1 109 56.0
SGA_v2.0_scaffold5G03062 Striga asiatica HOM05D011272 ORTHO05D010636 1.4e-28 130.2 91 62.6
SGA_v2.0_scaffold37G14870 Striga asiatica HOM05D011272 ORTHO05D010636 5.0e-23 111.7 106 48.1
SGA_v2.0_scaffold214G42292 Striga asiatica HOM05D011272 ORTHO05D010636 1.1e-20 104.0 99 45.5
SGA_v2.0_scaffold11G05675 Striga asiatica HOM05D023122 ORTHO05D010636 1.4e-17 93.6 107 43.0
SGA_v2.0_scaffold123G33386 Striga asiatica HOM05D011272 ORTHO05D010636 1.4e-17 93.6 94 37.2
SGA_v2.0_scaffold59G20769 Striga asiatica HOM05D011272 ORTHO05D010636 4.1e-17 92.0 95 41.1
SGA_v2.0_scaffold118G32446 Striga asiatica HOM05D000003 ORTHO05D000004 3.0e-15 85.9 101 39.6
SGA_v2.0_scaffold17G08173 Striga asiatica HOM05D000003 ORTHO05D000004 5.1e-15 85.1 105 41.0
SGA_v2.0_scaffold259G45819 Striga asiatica HOM05D000003 ORTHO05D000004 8.6e-15 84.3 102 39.2
SGA_v2.0_scaffold12G06017 Striga asiatica HOM05D009140 ORTHO05D010636 2.8e-13 79.3 100 34.0
SGA_v2.0_scaffold179G39541 Striga asiatica HOM05D023122 ORTHO05D010636 2.8e-13 79.3 86 41.9
SGA_v2.0_scaffold13G06590 Striga asiatica HOM05D011272 ORTHO05D010636 6.2e-13 78.2 89 42.7
SGA_v2.0_scaffold2392G54112 Striga asiatica HOM05D000003 ORTHO05D000006 6.2e-13 78.2 100 43.0
SGA_v2.0_scaffold163G37969 Striga asiatica HOM05D000003 ORTHO05D000004 1.4e-12 77.0 117 37.6
SGA_v2.0_scaffold53G19333 Striga asiatica HOM05D009140 ORTHO05D010636 1.8e-12 76.6 112 33.9
SGA_v2.0_scaffold484G52346 Striga asiatica HOM05D000003 ORTHO05D010636 6.8e-12 74.7 103 40.8
SGA_v2.0_scaffold16G07865 Striga asiatica HOM05D000341 ORTHO05D001197 8.9e-12 74.3 103 39.8
SGA_v2.0_scaffold83G26455 Striga asiatica HOM05D000003 ORTHO05D010636 2.0e-11 73.2 94 40.4
SGA_v2.0_scaffold93G28364 Striga asiatica HOM05D009140 ORTHO05D010636 2.6e-11 72.8 99 36.4
SGA_v2.0_scaffold56G19898 Striga asiatica HOM05D000003 ORTHO05D010636 3.4e-11 72.4 98 42.9
SGA_v2.0_scaffold231G43406 Striga asiatica HOM05D000024 ORTHO05D000006 9.9e-11 70.9 92 39.1
SGA_v2.0_scaffold72G24192 Striga asiatica HOM05D026623 ORTHO05D403235 1.3e-10 70.5 82 35.4
SGA_v2.0_scaffold367G50060 Striga asiatica HOM05D000003 ORTHO05D010636 1.7e-10 70.1 101 37.6
SGA_v2.0_scaffold283G46986 Striga asiatica HOM05D000003 ORTHO05D010636 2.9e-10 69.3 96 38.5
SGA_v2.0_scaffold206G41847 Striga asiatica HOM05D000254 ORTHO05D010636 3.8e-10 68.9 87 40.2
SGA_v2.0_scaffold10G05079 Striga asiatica HOM05D000003 ORTHO05D000004 6.4e-10 68.2 103 35.0
SGA_v2.0_scaffold63G21783 Striga asiatica HOM05D009108 ORTHO05D011557 6.4e-10 68.2 88 37.5
SGA_v2.0_scaffold232G43488 Striga asiatica HOM05D011272 ORTHO05D010636 1.9e-09 66.6 96 29.2
SGA_v2.0_scaffold240G44154 Striga asiatica HOM05D001437 ORTHO05D001297 1.9e-09 66.6 99 36.4
CANSAT78G0832 Cannabis sativa HOM05D000003 ORTHO05D000004 2.4e-09 66.2 102 36.3
PSO541G6036 Papaver somniferum HOM05D000003 ORTHO05D000004 3.2e-09 65.9 94 36.2
SGA_v2.0_scaffold23G10019 Striga asiatica HOM05D000003 ORTHO05D000004 3.2e-09 65.9 96 33.3
Aa31csc275G20 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.1e-09 65.5 103 32.0
SGA_v2.0_scaffold11G05791 Striga asiatica HOM05D000563 ORTHO05D000536 7.1e-09 64.7 100 33.0
SGA_v2.0_scaffold6G03466 Striga asiatica HOM05D000003 ORTHO05D000004 7.1e-09 64.7 100 32.0
SGA_v2.0_scaffold43G16397 Striga asiatica HOM05D009140 ORTHO05D010215 9.2e-09 64.3 99 34.3
SGA_v2.0_scaffold57G20243 Striga asiatica HOM05D011272 ORTHO05D010636 9.2e-09 64.3 91 33.0
BcaC02g08831 Brassica carinata HOM05D000003 ORTHO05D000004 3.5e-08 62.4 104 33.7
SGA_v2.0_scaffold102G29891 Striga asiatica HOM05D003766 ORTHO05D004607 4.6e-08 62.0 96 31.2
Aa31LG2G16390 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.3e-07 60.5 105 29.5
Aa31LG8G11510 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.7e-07 60.1 105 27.6
SGA_v2.0_scaffold112G31618 Striga asiatica HOM05D023122 ORTHO05D010636 1.7e-07 60.1 61 42.6
SGA_v2.0_scaffold134G34731 Striga asiatica HOM05D009140 ORTHO05D000004 1.7e-07 60.1 69 36.2
SGA_v2.0_scaffold34G13687 Striga asiatica HOM05D011272 ORTHO05D010636 2.3e-07 59.7 86 37.2
BcaC06g35689 Brassica carinata HOM05D000003 ORTHO05D000004 3.0e-07 59.3 103 32.0
CANSAT35G1450 Cannabis sativa HOM05D000003 ORTHO05D000004 3.9e-07 58.9 106 33.0
SGA_v2.0_scaffold41G15849 Striga asiatica HOM05D024586 ORTHO05D022525 5.1e-07 58.5 59 47.5
Aa31LG7G12310 Aethionema arabicum HOM05D000003 ORTHO05D000004 6.6e-07 58.2 119 31.1
PSO339G3052 Papaver somniferum HOM05D000003 ORTHO05D000004 6.6e-07 58.2 95 32.6
PSO541G0757 Papaver somniferum HOM05D000003 ORTHO05D000004 6.6e-07 58.2 95 32.6
SGA_v2.0_scaffold57G20155 Striga asiatica HOM05D009140 ORTHO05D010636 6.6e-07 58.2 89 30.3
Aa31sc25G170 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.6e-07 57.8 105 28.6
BcaC03g17123 Brassica carinata HOM05D000496 ORTHO05D000411 8.6e-07 57.8 116 30.2
PSO339G5018 Papaver somniferum HOM05D000003 ORTHO05D000004 8.6e-07 57.8 95 32.6
SGA_v2.0_scaffold156G37281 Striga asiatica HOM05D011272 ORTHO05D010636 8.6e-07 57.8 69 34.8
BcaB05g22054 Brassica carinata HOM05D000003 ORTHO05D001498 1.5e-06 57.0 105 33.3
SGA_v2.0_scaffold15G07258 Striga asiatica HOM05D009140 ORTHO05D010636 1.9e-06 56.6 91 28.6
BcaB01g02686 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-06 56.2 112 30.4
ClCG10G012420 Citrullus lanatus HOM05D000003 ORTHO05D000004 3.3e-06 55.8 116 31.9
SGA_v2.0_scaffold3G01490 Striga asiatica HOM05D030754 ORTHO05D000004 3.3e-06 55.8 83 33.7
SGA_v2.0_scaffold455G51905 Striga asiatica HOM05D015799 ORTHO05D010636 3.3e-06 55.8 73 34.2
SGA_v2.0_scaffold75G24875 Striga asiatica HOM05D011272 ORTHO05D010636 3.3e-06 55.8 52 42.3
Aa31sc380G40 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.3e-06 55.5 101 27.7
AUR62026917 Chenopodium quinoa HOM05D000003 ORTHO05D000004 4.3e-06 55.5 112 33.0
SGA_v2.0_scaffold13G06616 Striga asiatica HOM05D015799 ORTHO05D010636 4.3e-06 55.5 82 32.9
SGA_v2.0_scaffold254G45257 Striga asiatica HOM05D005881 ORTHO05D007298 4.3e-06 55.5 49 46.9
PSO210G3048 Papaver somniferum HOM05D000003 ORTHO05D000004 5.6e-06 55.1 95 31.6
BcaC07g37790 Brassica carinata HOM05D000496 ORTHO05D000411 7.3e-06 54.7 82 35.4
C09p39900 Brassica napus HOM05D000003 ORTHO05D000004 7.3e-06 54.7 105 35.2
SGA_v2.0_scaffold76G25079 Striga asiatica HOM05D009140 ORTHO05D000004 7.3e-06 54.7 81 35.8
CANSAT35G0480 Cannabis sativa HOM05D000003 ORTHO05D000004 9.6e-06 54.3 109 28.4
SGA_v2.0_scaffold36G14413 Striga asiatica HOM05D000003 ORTHO05D011213 9.6e-06 54.3 102 26.5
SGA_v2.0_scaffold64G21958 Striga asiatica HOM05D020088 ORTHO05D010636 9.6e-06 54.3 77 37.7


User provided reference genes

Program Settings