Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold44G16725 Striga asiatica HOM05D000368 ORTHO05D009348 3.5e-88 328.9 268 100.0
MSTRG.8734 Avicennia marina HOM05D000368 ORTHO05D009348 7.4e-46 188.3 266 71.4
Solyc03g025740.4 Solanum lycopersicum HOM05D000368 ORTHO05D009348 9.1e-36 154.8 270 62.6
Sopen03g004560 Solanum pennellii HOM05D000368 ORTHO05D009348 1.6e-35 154.1 270 62.2
Nitab4.5_0002117g0050 Nicotiana tabacum HOM05D000368 ORTHO05D009348 2.0e-35 153.7 299 53.8
Dinv35216 Davidia involucrata HOM05D000368 ORTHO05D000289 1.0e-34 151.4 285 56.8
Migut.F00336 Erythranthe guttata HOM05D000368 ORTHO05D009348 1.7e-34 150.6 281 65.5
PGSC0003DMG402014344 Solanum tuberosum HOM05D000368 ORTHO05D009348 2.9e-34 149.8 270 61.5
Cc02_g02880 Coffea canephora HOM05D000368 ORTHO05D009348 6.5e-34 148.7 284 49.3
Potri.012G141700 Populus trichocarpa HOM05D000368 ORTHO05D009348 7.2e-33 145.2 283 59.4
Potri.015G144600 Populus trichocarpa HOM05D000368 ORTHO05D009348 2.1e-32 143.7 285 60.0
Manes.14G025600 Manihot esculenta HOM05D000368 ORTHO05D009348 3.6e-32 142.9 280 60.7
PSO782G2079 Papaver somniferum HOM05D000368 ORTHO05D009348 4.7e-32 142.5 290 59.3
GSVIVG01028962001 Vitis vinifera HOM05D000368 ORTHO05D009348 1.0e-31 141.4 286 58.0
CiPaw.04G071400 Carya illinoinensis HOM05D000368 ORTHO05D009348 1.8e-31 140.6 285 62.5
Lsat_1_v5_gn_2_132381 Lactuca sativa HOM05D000368 ORTHO05D009348 2.3e-31 140.2 278 59.4
Sabra15G0154200 Salix brachista HOM05D000368 ORTHO05D009348 2.3e-31 140.2 284 58.5
TWI39G0209 Tripterygium wilfordii HOM05D000368 ORTHO05D009348 2.3e-31 140.2 288 61.5
HanXRQChr07g0207001 Helianthus annuus HOM05D000368 ORTHO05D009348 3.0e-31 139.8 288 59.4
PSO063G1784 Papaver somniferum HOM05D000368 ORTHO05D009348 5.2e-31 139.0 290 56.2
TAR629G3168 Trochodendron aralioides HOM05D000368 ORTHO05D009348 1.2e-30 137.9 296 54.1
Cfa008323 Carpinus fangiana HOM05D000368 ORTHO05D009348 1.5e-30 137.5 288 59.4
Sc19g0001470 Simmondsia chinensis HOM05D000368 ORTHO05D009348 2.6e-30 136.7 284 62.7
MBI17_g19093_MAGBIO Magnolia biondii HOM05D000368 ORTHO05D009348 3.4e-30 136.3 307 54.1
Eucgr.K00263 Eucalyptus grandis HOM05D000368 ORTHO05D009348 4.4e-30 136.0 282 56.4
Ciclev10005579m.g Citrus clementina HOM05D000368 ORTHO05D009348 9.7e-30 134.8 288 58.0
CsaV3_3G017130 Cucumis sativus L. HOM05D000368 ORTHO05D009348 2.8e-29 133.3 270 64.4
ECA238G2658 Erigeron canadensis HOM05D000368 ORTHO05D000289 2.8e-29 133.3 282 58.9
Lj5g0009535 Lotus japonicus HOM05D000368 ORTHO05D009348 4.8e-29 132.5 273 62.3
Thecc.03G177600 Theobroma cacao HOM05D000368 ORTHO05D009348 1.1e-28 131.3 282 59.6
Hund11743 Selenicereus undatus HOM05D000368 ORTHO05D009348 1.8e-28 130.6 289 54.7
ClCG05G008070 Citrullus lanatus HOM05D000368 ORTHO05D009348 2.4e-28 130.2 272 63.6
THA.LOC104811975 Tarenaya hassleriana HOM05D000368 ORTHO05D009348 2.4e-28 130.2 285 57.5
TPR.G27005 Trifolium pratense HOM05D000368 ORTHO05D009348 2.4e-28 130.2 273 46.2
Rhsim09G0197900 Rhododendron simsii HOM05D000368 ORTHO05D009348 9.1e-28 128.3 279 54.5
PGR142G2510 Punica granatum HOM05D000368 ORTHO05D009348 1.2e-27 127.9 287 60.6
Ah.13g068650 Amaranthus hybridus HOM05D000368 ORTHO05D009348 2.7e-27 126.7 283 50.5
Aqoxy5G04003 Aquilegia oxysepala HOM05D000368 ORTHO05D009348 5.9e-27 125.6 287 60.3
Cpa.g.sc107.59 Carica papaya HOM05D000368 ORTHO05D009348 5.9e-27 125.6 283 57.6
Aa31LG3G8750 Aethionema arabicum HOM05D000368 ORTHO05D009348 1.3e-26 124.4 285 55.1
EL10Ac3g05631 Beta vulgaris HOM05D000368 ORTHO05D009348 1.3e-26 124.4 276 51.8
Glyma.20G159100 Glycine max HOM05D000368 ORTHO05D009348 1.7e-26 124.0 276 60.9
Prupe.2G295100 Prunus persica HOM05D000368 ORTHO05D009348 2.9e-26 123.2 284 47.2
Haze_13700 Corylus avellana HOM05D000368 ORTHO05D009348 3.8e-26 122.9 263 61.6
Sed0010584 Sechium edule HOM05D000368 ORTHO05D009348 5.0e-26 122.5 273 61.5
MELO3C006911.2 Cucumis melo HOM05D000368 ORTHO05D009348 6.5e-26 122.1 240 62.9
QL09p014019 Quercus lobata HOM05D000368 ORTHO05D009348 6.5e-26 122.1 322 49.4
DCAR_020244 Daucus carota HOM05D000368 ORTHO05D009348 8.5e-26 121.7 241 59.8
Ca_10757_v3 Cicer arietinum L. HOM05D000368 ORTHO05D009348 3.2e-25 119.8 273 38.8
FAN06G1486 Fragaria x ananassa HOM05D000368 ORTHO05D009348 3.2e-25 119.8 286 46.9
FAN10G1532 Fragaria x ananassa HOM05D000368 ORTHO05D009348 3.2e-25 119.8 286 51.7
MD07G1269700 Malus domestica HOM05D000368 ORTHO05D009348 4.2e-25 119.4 286 46.2
FAN06G0492 Fragaria x ananassa HOM05D000368 ORTHO05D009348 7.2e-25 118.6 286 46.9
Nn1g01474 Nelumbo nucifera HOM05D000368 ORTHO05D009348 1.6e-24 117.5 293 54.9
RcHm_v2.0_Chr1g0377401 Rosa chinensis HOM05D000368 ORTHO05D009348 1.6e-24 117.5 290 46.6
Gohir.A12G257200 Gossypium hirsutum HOM05D000368 ORTHO05D009348 2.1e-24 117.1 275 52.7
arahy.Tifrunner.gnm1.ann1.C4Z81U Arachis hypogaea HOM05D000368 ORTHO05D009348 2.7e-24 116.7 287 53.7
Gohir.D12G258500 Gossypium hirsutum HOM05D000368 ORTHO05D009348 3.6e-24 116.3 275 52.0
AL8G26780 Arabidopsis lyrata HOM05D000368 ORTHO05D009348 4.7e-24 115.9 277 56.3
Gorai.008G276900 Gossypium raimondii HOM05D000368 ORTHO05D009348 6.1e-24 115.5 274 51.8
arahy.Tifrunner.gnm1.ann1.HM7G91 Arachis hypogaea HOM05D000368 ORTHO05D009348 8.0e-24 115.2 287 53.3
VMungo0720G3173 Vigna mungo HOM05D000368 ORTHO05D009348 8.0e-24 115.2 276 53.6
Carub.0008s1248 Capsella rubella HOM05D000368 ORTHO05D009348 1.0e-23 114.8 274 57.3
vmacro09836 Vaccinium macrocarpon HOM05D000368 ORTHO05D000289 1.0e-23 114.8 260 48.8
Actinidia31822 Actinidia chinensis HOM05D000368 ORTHO05D009348 1.4e-23 114.4 150 74.7
CANSAT21G1838 Cannabis sativa HOM05D000368 ORTHO05D009348 1.8e-23 114.0 260 61.5
Glyma.10G235200 Glycine max HOM05D000368 ORTHO05D009348 2.3e-23 113.6 277 60.3
Hma1.2p1_0270F.1_g107970 Hydrangea macrophylla HOM05D000368 ORTHO05D009348 4.0e-23 112.8 291 57.7
Lalb_Chr21g0305051 Lupinus albus HOM05D000368 ORTHO05D009348 5.2e-23 112.5 274 54.4
FAN10G1519 Fragaria x ananassa HOM05D000368 ORTHO05D009348 6.8e-23 112.1 282 50.7
MD01G1201700 Malus domestica HOM05D000368 ORTHO05D009348 8.8e-23 111.7 287 49.5
Phvul.007G070700 Phaseolus vulgaris HOM05D000368 ORTHO05D009348 3.4e-22 109.8 243 54.3
CARHR265330 Cardamine hirsuta HOM05D000368 ORTHO05D009348 4.4e-22 109.4 281 55.9
AT5G52380 Arabidopsis thaliana HOM05D000368 ORTHO05D009348 2.2e-21 107.1 277 52.0
Dinv28433 Davidia involucrata HOM05D000368 ORTHO05D009348 2.2e-21 107.1 128 68.0
CSS0042203 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 2.8e-21 106.7 148 60.8
CSS0028945 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 4.8e-21 105.9 148 64.9
FAN01G1188 Fragaria x ananassa HOM05D000368 ORTHO05D009348 3.1e-20 103.2 240 49.2
Psat0s3135g0040 Pisum sativum HOM05D000368 ORTHO05D009348 7.0e-20 102.1 275 52.7
Dinv24555 Davidia involucrata HOM05D000368 ORTHO05D009348 1.6e-19 100.9 103 63.1
C03p18350 Brassica napus HOM05D000368 ORTHO05D000289 1.3e-18 97.8 101 69.3
BolC3t14232H Brassica oleracea HOM05D000368 ORTHO05D000289 1.3e-18 97.8 101 68.3
HPP92_018588 Vanilla planifolia HOM05D000368 ORTHO05D009348 2.3e-18 97.1 276 53.3
AUR62015971 Chenopodium quinoa HOM05D000368 ORTHO05D009348 3.8e-18 96.3 224 58.9
FvH4_7g29542 Fragaria vesca HOM05D000368 ORTHO05D009348 3.8e-18 96.3 158 45.6
Sp6g14600 Schrenkiella parvula HOM05D000368 ORTHO05D000289 3.8e-18 96.3 101 55.4
HPP92_006518 Vanilla planifolia HOM05D000368 ORTHO05D009348 3.8e-18 96.3 277 53.8
BraA03t10861Z Brassica rapa HOM05D000368 ORTHO05D000289 5.0e-18 95.9 101 69.3
A03p15700 Brassica napus HOM05D000368 ORTHO05D000289 8.6e-18 95.1 101 69.3
Thhalv10014379m.g Eutrema salsugineum HOM05D000368 ORTHO05D009348 1.9e-17 94.0 280 54.3
C09p41730 Brassica napus HOM05D000368 ORTHO05D000289 3.3e-17 93.2 100 59.0
BolC9t57061H Brassica oleracea HOM05D000368 ORTHO05D009348 3.3e-17 93.2 100 59.0
Atru.BG.181.p Acer truncatum HOM05D000368 ORTHO05D009348 7.2e-17 92.0 99 55.6
Atru.chr1.452 Acer truncatum HOM05D000368 ORTHO05D009348 7.2e-17 92.0 99 55.6
Duzib205G0377 Durio zibethinus HOM05D000368 ORTHO05D000289 2.1e-16 90.5 259 49.0
Os04g0555800 Oryza sativa ssp. japonica HOM05D000368 ORTHO05D009348 1.8e-15 87.4 102 65.7
ATR0680G368 Amborella trichopoda HOM05D000368 ORTHO05D009348 2.6e-14 83.6 106 58.5
Nitab4.5_0001842g0090 Nicotiana tabacum HOM05D000368 ORTHO05D009348 4.4e-14 82.8 270 38.9
Zm00001eb074410 Zea mays HOM05D000368 ORTHO05D009348 9.8e-14 81.6 101 41.6
A10p09970 Brassica napus HOM05D000368 ORTHO05D009348 1.2e-11 74.7 243 27.6
CBR_g18775 Chara braunii HOM05D000368 ORTHO05D009348 2.0e-11 73.9 179 44.1
Pp3c16_20170 Physcomitrium patens HOM05D000368 ORTHO05D009348 1.5e-09 67.8 42 66.7
Dinv28434 Davidia involucrata HOM05D000368 ORTHO05D000289 1.9e-09 67.4 111 53.2
Mapoly0006s0064 Marchantia polymorpha HOM05D000368 ORTHO05D009348 7.3e-09 65.5 100 51.0
Actinidia03122 Actinidia chinensis HOM05D000368 ORTHO05D009348 6.1e-08 62.4 41 68.3
Dinv24556 Davidia involucrata HOM05D000368 ORTHO05D009348 1.4e-07 61.2 165 50.9
AagrBONN_evm.TU.Sc2ySwM_117.528 Anthoceros agrestis HOM05D000368 ORTHO05D009348 1.8e-07 60.8 40 60.0
BraA10t43080Z Brassica rapa HOM05D000368 ORTHO05D009348 4.0e-07 59.7 134 29.9
SEGI_15321 Sequoiadendron giganteum HOM05D000368 ORTHO05D009348 4.0e-07 59.7 39 59.0


User provided reference genes

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