Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4400G54479 Striga asiatica HOM05D007657 ORTHO05D009471 1.2e-121 439.9 221 100.0
SalBow1G6397 Salvia bowleyana HOM05D007657 ORTHO05D009471 8.3e-27 124.8 224 40.2
SGA_v2.0_scaffold159G37602 Striga asiatica HOM05D007657 ORTHO05D009471 1.7e-24 117.1 208 41.8
Oeu034340.1 Olea europaea HOM05D007657 ORTHO05D009471 2.8e-22 109.8 112 53.6
Hma1.2p1_2477F.1_g322870 Hydrangea macrophylla HOM05D007657 ORTHO05D009471 3.6e-22 109.4 118 50.8
Lsat_1_v5_gn_3_43060 Lactuca sativa HOM05D007657 ORTHO05D009471 4.7e-22 109.0 140 43.6
Dinv18547 Davidia involucrata HOM05D007657 ORTHO05D009471 6.2e-22 108.6 108 53.7
HanXRQChr15g0479591 Helianthus annuus HOM05D007657 ORTHO05D009471 6.2e-22 108.6 119 47.9
TWI18G0648 Tripterygium wilfordii HOM05D007657 ORTHO05D009471 2.3e-21 106.7 105 56.2
MBI18_g21102_MAGBIO Magnolia biondii HOM05D007657 ORTHO05D009471 6.8e-21 105.1 113 50.4
MBI18_g45174_MAGBIO Magnolia biondii HOM05D007657 ORTHO05D009471 6.8e-21 105.1 113 50.4
unitig_62.g23194 Utricularia gibba HOM05D007657 ORTHO05D009471 8.9e-21 104.8 209 36.4
CAN.G86.24 Capsicum annuum HOM05D007657 ORTHO05D009471 2.0e-20 103.6 166 42.8
PGSC0003DMG400026164 Solanum tuberosum HOM05D007657 ORTHO05D009471 2.6e-20 103.2 148 43.2
Lj3g0008282 Lotus japonicus HOM05D007657 ORTHO05D009471 3.4e-20 102.8 175 39.4
Rhsim04G0057500 Rhododendron simsii HOM05D007657 ORTHO05D009471 7.5e-20 101.7 109 53.2
Sopen07g026480 Solanum pennellii HOM05D007657 ORTHO05D009471 7.5e-20 101.7 119 48.7
Thecc.02G164200 Theobroma cacao HOM05D007657 ORTHO05D009471 7.5e-20 101.7 106 51.9
Solyc07g052930.3 Solanum lycopersicum HOM05D007657 ORTHO05D009471 9.8e-20 101.3 119 48.7
Gohir.A03G163000 Gossypium hirsutum HOM05D007657 ORTHO05D009471 1.7e-19 100.5 109 50.5
MD17G1091100 Malus domestica HOM05D007657 ORTHO05D009471 2.2e-19 100.1 105 49.5
Atru.chr6.3119 Acer truncatum HOM05D007657 ORTHO05D009471 2.9e-19 99.8 112 51.8
Glyma.12G196900 Glycine max HOM05D007657 ORTHO05D009471 3.7e-19 99.4 227 35.2
Nitab4.5_0003429g0020 Nicotiana tabacum HOM05D007657 ORTHO05D009471 3.7e-19 99.4 123 48.0
Ca_01565_v3 Cicer arietinum L. HOM05D007657 ORTHO05D009471 1.1e-18 97.8 163 38.7
Peaxi162Scf00007g01411 Petunia axillaris HOM05D007657 ORTHO05D009471 1.1e-18 97.8 134 45.5
Sc12g0002470 Simmondsia chinensis HOM05D007657 ORTHO05D009471 1.1e-18 97.8 126 46.8
MBI18_g21101_MAGBIO Magnolia biondii HOM05D007657 ORTHO05D009471 1.4e-18 97.4 113 49.6
CiPaw.03G164200 Carya illinoinensis HOM05D007657 ORTHO05D009471 2.4e-18 96.7 111 46.8
ClCG02G001620 Citrullus lanatus HOM05D007657 ORTHO05D009471 4.1e-18 95.9 141 45.4
Duzib248G0741 Durio zibethinus HOM05D007657 ORTHO05D009471 5.4e-18 95.5 107 49.5
CsaV3_7G003870 Cucumis sativus L. HOM05D007657 ORTHO05D009471 7.1e-18 95.1 185 37.8
Cc05_g05320 Coffea canephora HOM05D007657 ORTHO05D009471 9.2e-18 94.7 127 42.5
MELO3C018792.2 Cucumis melo HOM05D007657 ORTHO05D009471 9.2e-18 94.7 110 49.1
Psat0s3329g0040 Pisum sativum HOM05D007657 ORTHO05D009471 9.2e-18 94.7 108 48.1
Gohir.D02G186500 Gossypium hirsutum HOM05D007657 ORTHO05D009471 1.2e-17 94.4 138 43.5
FAN05G3329 Fragaria x ananassa HOM05D007657 ORTHO05D009471 1.6e-17 94.0 117 44.4
FAN09G3022 Fragaria x ananassa HOM05D007657 ORTHO05D009471 1.6e-17 94.0 223 34.1
Gorai.005G208700 Gossypium raimondii HOM05D007657 ORTHO05D009471 1.6e-17 94.0 109 48.6
VMungo1080G1905 Vigna mungo HOM05D007657 ORTHO05D009471 1.6e-17 94.0 165 42.4
Cpa.g.sc8.253 Carica papaya HOM05D007657 ORTHO05D009471 2.1e-17 93.6 116 46.6
THA.LOC104802534 Tarenaya hassleriana HOM05D007657 ORTHO05D009471 2.1e-17 93.6 102 51.0
arahy.Tifrunner.gnm1.ann1.X70W6B Arachis hypogaea HOM05D007657 ORTHO05D009471 3.5e-17 92.8 110 46.4
Prupe.3G222500 Prunus persica HOM05D007657 ORTHO05D009471 3.5e-17 92.8 114 45.6
FvH4_6g43750 Fragaria vesca HOM05D007657 ORTHO05D009471 4.6e-17 92.4 120 44.2
FAN02G3547 Fragaria x ananassa HOM05D007657 ORTHO05D009471 4.6e-17 92.4 118 43.2
FAN14G5828 Fragaria x ananassa HOM05D007657 ORTHO05D009471 6.0e-17 92.0 120 44.2
Phvul.005G112100 Phaseolus vulgaris HOM05D007657 ORTHO05D009471 7.8e-17 91.7 111 47.7
COL.COLO4_13025 Corchorus olitorius HOM05D007657 ORTHO05D009471 1.7e-16 90.5 104 50.0
RcHm_v2.0_Chr2g0160481 Rosa chinensis HOM05D007657 ORTHO05D009471 1.7e-16 90.5 122 43.4
CANSAT64G1489 Cannabis sativa HOM05D007657 ORTHO05D009471 5.1e-16 89.0 117 44.4
Cfa014460 Carpinus fangiana HOM05D007657 ORTHO05D009471 6.6e-16 88.6 118 44.1
Duzib052G0340 Durio zibethinus HOM05D007657 ORTHO05D009471 6.6e-16 88.6 107 45.8
Nn1g03743 Nelumbo nucifera HOM05D020747 ORTHO05D009471 6.6e-16 88.6 110 46.4
Lalb_Chr14g0375601 Lupinus albus HOM05D007657 ORTHO05D009471 8.6e-16 88.2 117 44.4
Sed0004603 Sechium edule HOM05D007657 ORTHO05D009471 1.1e-15 87.8 120 43.3
Medtr2g089070 Medicago truncatula HOM05D007657 ORTHO05D009471 1.9e-15 87.0 166 38.0
TPR.G30798 Trifolium pratense HOM05D007657 ORTHO05D009471 2.5e-15 86.7 110 45.5
QL08p034229 Quercus lobata HOM05D007657 ORTHO05D009471 4.3e-15 85.9 109 42.2
HPP92_000868 Vanilla planifolia HOM05D007657 ORTHO05D009471 4.3e-15 85.9 164 39.0
Aqoxy7G03995 Aquilegia oxysepala HOM05D007657 ORTHO05D009471 5.6e-15 85.5 117 41.9
Aa31LG8G8650 Aethionema arabicum HOM05D007657 ORTHO05D009471 1.2e-14 84.3 107 43.9
Thhalv10021235m.g Eutrema salsugineum HOM05D007657 ORTHO05D009471 2.1e-14 83.6 109 44.0
BcaB06g26306 Brassica carinata HOM05D007657 ORTHO05D009471 6.2e-14 82.0 120 41.7
A05p26740 Brassica napus HOM05D007657 ORTHO05D009471 6.2e-14 82.0 144 39.6
Migut.H01205 Erythranthe guttata HOM05D007657 ORTHO05D009471 6.2e-14 82.0 80 53.8
Sp3g19920 Schrenkiella parvula HOM05D007657 ORTHO05D009471 6.2e-14 82.0 103 44.7
Carub.0003s2227 Capsella rubella HOM05D007657 ORTHO05D009471 8.1e-14 81.6 103 44.7
BraA05t21556Z Brassica rapa HOM05D007657 ORTHO05D009471 1.8e-13 80.5 144 38.9
Nitab4.5_0001134g0150 Nicotiana tabacum HOM05D007657 ORTHO05D009471 1.8e-13 80.5 102 46.1
AT3G22100 Arabidopsis thaliana HOM05D007657 ORTHO05D009471 4.0e-13 79.3 143 37.1
ATR0804G080 Amborella trichopoda HOM05D007657 ORTHO05D009471 5.2e-13 79.0 103 42.7
BcaB04g20544 Brassica carinata HOM05D007657 ORTHO05D009471 8.9e-13 78.2 166 34.3
CDE05G1372 Ceratophyllum demersum HOM05D007657 ORTHO05D009471 1.5e-12 77.4 110 39.1
BcaC05g28104 Brassica carinata HOM05D007657 ORTHO05D009471 2.0e-12 77.0 157 36.3
C05p41310 Brassica napus HOM05D007657 ORTHO05D009471 2.0e-12 77.0 157 36.3
BolC5t32872H Brassica oleracea HOM05D007657 ORTHO05D009471 2.0e-12 77.0 157 36.3
AL3G36280 Arabidopsis lyrata HOM05D007657 ORTHO05D009471 4.4e-12 75.9 103 39.8
Nn1g02822 Nelumbo nucifera HOM05D020747 ORTHO05D009471 2.9e-11 73.2 171 31.0
Nn012s41456 Nelumbo nucifera HOM05D020747 ORTHO05D009471 8.4e-11 71.6 96 41.7
Actinidia30501 Actinidia chinensis HOM05D007657 ORTHO05D009471 3.2e-10 69.7 80 50.0
Psat7g073040 Pisum sativum HOM05D007657 ORTHO05D009471 5.4e-10 68.9 80 43.8
Potri.011G157700 Populus trichocarpa HOM05D003734 ORTHO05D004270 1.7e-08 63.9 154 30.5
PGR042G0132 Punica granatum HOM05D007657 ORTHO05D009471 1.7e-08 63.9 167 33.5
Sabra11G0142400 Salix brachista HOM05D003734 ORTHO05D004270 2.3e-08 63.5 159 30.8
unitig_32.g10876 Utricularia gibba HOM05D003734 ORTHO05D004270 3.9e-08 62.8 104 37.5
FAN25G3016 Fragaria x ananassa HOM05D003734 ORTHO05D004270 5.1e-08 62.4 105 40.0
ECA247G3319 Erigeron canadensis HOM05D003734 ORTHO05D004270 6.6e-08 62.0 107 38.3
SEGI_10364 Sequoiadendron giganteum HOM05D000850 ORTHO05D014998 6.6e-08 62.0 105 35.2
SEGI_20243 Sequoiadendron giganteum HOM05D000850 ORTHO05D014998 6.6e-08 62.0 105 35.2
Atru.chr1.975 Acer truncatum HOM05D003734 ORTHO05D004270 1.1e-07 61.2 112 36.6
ATR0568G033 Amborella trichopoda HOM05D003734 ORTHO05D004270 1.1e-07 61.2 108 34.3
Migut.M01923 Erythranthe guttata HOM05D003734 ORTHO05D004270 1.5e-07 60.8 97 36.1
Nitab4.5_0000623g0010 Nicotiana tabacum HOM05D003734 ORTHO05D004270 1.9e-07 60.5 110 37.3
RcHm_v2.0_Chr5g0018101 Rosa chinensis HOM05D003734 ORTHO05D004270 1.9e-07 60.5 112 36.6
Cfa022977 Carpinus fangiana HOM05D003734 ORTHO05D004270 3.3e-07 59.7 105 34.3
ECA234G0609 Erigeron canadensis HOM05D003734 ORTHO05D004270 3.3e-07 59.7 109 33.9
Migut.H01308 Erythranthe guttata HOM05D003734 ORTHO05D004270 3.3e-07 59.7 92 38.0
Psat7g073080 Pisum sativum HOM05D007657 ORTHO05D009471 3.3e-07 59.7 87 37.9
Sabra16G0312500 Salix brachista HOM05D003734 ORTHO05D004270 3.3e-07 59.7 171 27.5
SGA_v2.0_scaffold1G00292 Striga asiatica HOM05D003734 ORTHO05D004270 3.3e-07 59.7 166 30.7
ATR0772G185 Amborella trichopoda HOM05D007657 ORTHO05D009471 4.3e-07 59.3 77 44.2
FvH4_3g11190 Fragaria vesca HOM05D003734 ORTHO05D004270 4.3e-07 59.3 105 39.0
Nitab4.5_0008763g0020 Nicotiana tabacum HOM05D003734 ORTHO05D004270 4.3e-07 59.3 104 36.5
Cpa.g.sc489.6 Carica papaya HOM05D003734 ORTHO05D004270 5.6e-07 58.9 161 28.0
CDE07G1862 Ceratophyllum demersum HOM05D003734 ORTHO05D004270 5.6e-07 58.9 112 33.0
Haze_05937 Corylus avellana HOM05D003734 ORTHO05D004270 7.3e-07 58.5 206 27.2
arahy.Tifrunner.gnm1.ann1.CF90NA Arachis hypogaea HOM05D003734 ORTHO05D004270 9.6e-07 58.2 213 28.2
Atru.chr1.1007 Acer truncatum HOM05D003734 ORTHO05D004270 1.2e-06 57.8 112 34.8
MD05G1265500 Malus domestica HOM05D003734 ORTHO05D004270 1.2e-06 57.8 113 37.2
Cc02_g35090 Coffea canephora HOM05D003734 ORTHO05D004270 1.6e-06 57.4 112 31.2
Potri.001G461000 Populus trichocarpa HOM05D003734 ORTHO05D004270 1.6e-06 57.4 151 30.5
unitig_748.g8277 Utricularia gibba HOM05D003734 ORTHO05D004270 1.6e-06 57.4 99 36.4
arahy.Tifrunner.gnm1.ann1.F6GRBT Arachis hypogaea HOM05D003734 ORTHO05D004270 2.1e-06 57.0 203 29.1
FvH4_1g29760 Fragaria vesca HOM05D007657 ORTHO05D009471 2.1e-06 57.0 71 42.3
FAN19G0836 Fragaria x ananassa HOM05D007657 ORTHO05D009471 2.1e-06 57.0 55 49.1
FAN21G1749 Fragaria x ananassa HOM05D003734 ORTHO05D004270 2.1e-06 57.0 162 30.9
QL04p088957 Quercus lobata HOM05D003734 ORTHO05D004270 2.1e-06 57.0 152 28.3
BolC4t22983H Brassica oleracea HOM05D003734 ORTHO05D004270 2.8e-06 56.6 174 29.9
Cfa019641 Carpinus fangiana HOM05D007657 ORTHO05D009471 2.8e-06 56.6 125 32.0
FAN16G0318 Fragaria x ananassa HOM05D003734 ORTHO05D004270 2.8e-06 56.6 162 29.6
MD10G1243500 Malus domestica HOM05D003734 ORTHO05D004270 2.8e-06 56.6 112 33.9
Peaxi162Scf00876g00220 Petunia axillaris HOM05D003734 ORTHO05D004270 2.8e-06 56.6 96 36.5
SEGI_20902 Sequoiadendron giganteum HOM05D000850 ORTHO05D014998 2.8e-06 56.6 167 31.1
Peaxi162Scf00014g01814 Petunia axillaris HOM05D001080 ORTHO05D004270 3.6e-06 56.2 110 34.5
QL04p088510 Quercus lobata HOM05D003734 ORTHO05D004270 3.6e-06 56.2 152 25.7
SEGI_09905 Sequoiadendron giganteum HOM05D000850 ORTHO05D014998 3.6e-06 56.2 115 28.7
BcaC02g11564 Brassica carinata HOM05D003734 ORTHO05D004270 4.7e-06 55.8 182 28.6
COL.COLO4_22896 Corchorus olitorius HOM05D003734 ORTHO05D004270 4.7e-06 55.8 112 31.2
Oeu052711.1 Olea europaea HOM05D003734 ORTHO05D004270 4.7e-06 55.8 160 26.9
Oeu052712.1 Olea europaea HOM05D003734 ORTHO05D004270 4.7e-06 55.8 160 26.9
SalBow3G4351 Salvia bowleyana HOM05D003734 ORTHO05D004270 4.7e-06 55.8 154 29.9
Actinidia33692 Actinidia chinensis HOM05D003734 ORTHO05D004270 6.2e-06 55.5 109 36.7
Aqoxy2G02922 Aquilegia oxysepala HOM05D003734 ORTHO05D004270 6.2e-06 55.5 107 31.8
AL4G30800 Arabidopsis lyrata HOM05D003734 ORTHO05D004270 6.2e-06 55.5 163 28.8
Duzib187G1153 Durio zibethinus HOM05D003734 ORTHO05D004270 6.2e-06 55.5 96 37.5
Lj3g0011993 Lotus japonicus HOM05D003734 ORTHO05D004270 6.2e-06 55.5 112 32.1
Prupe.4G100400 Prunus persica HOM05D003734 ORTHO05D004270 6.2e-06 55.5 157 29.3
Actinidia29264 Actinidia chinensis HOM05D003734 ORTHO05D004270 8.1e-06 55.1 109 34.9
BolC3t14654H Brassica oleracea HOM05D003734 ORTHO05D004270 8.1e-06 55.1 161 26.7
PSO675G3350 Papaver somniferum HOM05D003734 ORTHO05D004270 8.1e-06 55.1 115 29.6


User provided reference genes

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