Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold43G16465 Striga asiatica HOM05D001120 ORTHO05D002943 2.8e-196 688.3 329 100.0
SGA_v2.0_scaffold43G16464 Striga asiatica HOM05D001120 ORTHO05D002943 8.3e-132 474.2 349 71.9
SGA_v2.0_scaffold14G06826 Striga asiatica HOM05D001120 ORTHO05D002943 2.0e-56 223.8 352 40.3
SGA_v2.0_scaffold4G02419 Striga asiatica HOM05D001120 ORTHO05D002943 6.5e-52 208.8 323 41.8
SGA_v2.0_scaffold106G30701 Striga asiatica HOM05D001120 ORTHO05D002943 9.4e-51 204.9 320 40.6
SGA_v2.0_scaffold10G05473 Striga asiatica HOM05D001120 ORTHO05D002943 3.9e-20 103.2 92 56.5
Rhsim07G0025300 Rhododendron simsii HOM05D001120 ORTHO05D002943 2.3e-17 94.0 344 27.6
vmacro13381 Vaccinium macrocarpon HOM05D001120 ORTHO05D002943 2.9e-15 87.0 324 28.7
CiPaw.03G098500 Carya illinoinensis HOM05D001120 ORTHO05D002943 2.4e-14 84.0 349 25.8
Rhsim05G0178800 Rhododendron simsii HOM05D001120 ORTHO05D002943 5.4e-14 82.8 316 27.2
Lsat_1_v5_gn_8_157341 Lactuca sativa HOM05D001120 ORTHO05D002943 7.0e-14 82.4 322 26.1
Cc02_g03730 Coffea canephora HOM05D001120 ORTHO05D002943 1.6e-13 81.3 350 25.4
Haze_13809 Corylus avellana HOM05D001120 ORTHO05D002943 3.5e-13 80.1 207 31.4
TWI23G0697 Tripterygium wilfordii HOM05D001120 ORTHO05D002943 4.6e-13 79.7 185 31.4
Hma1.2p1_0033F.1_g020890 Hydrangea macrophylla HOM05D001120 ORTHO05D002943 6.0e-13 79.3 181 32.0
PGR042G0858 Punica granatum HOM05D001120 ORTHO05D002943 6.0e-13 79.3 188 32.4
Cfa008242 Carpinus fangiana HOM05D001120 ORTHO05D004313 7.8e-13 79.0 187 31.6
GSVIVG01018475001 Vitis vinifera HOM05D001120 ORTHO05D002943 7.8e-13 79.0 185 31.9
Ah.13g067550 Amaranthus hybridus HOM05D001120 ORTHO05D002943 1.0e-12 78.6 186 31.7
TAR375G0839 Trochodendron aralioides HOM05D001120 ORTHO05D002943 1.0e-12 78.6 187 32.6
VMungo1127G0245 Vigna mungo HOM05D001120 ORTHO05D002943 1.0e-12 78.6 326 25.8
AUR62021289 Chenopodium quinoa HOM05D001120 ORTHO05D002943 1.3e-12 78.2 186 32.3
Nitab4.5_0000072g0150 Nicotiana tabacum HOM05D001120 ORTHO05D002943 1.7e-12 77.8 187 31.0
Nitab4.5_0006353g0020 Nicotiana tabacum HOM05D001120 ORTHO05D002943 1.7e-12 77.8 187 31.0
MELO3C006846.2 Cucumis melo HOM05D001120 ORTHO05D002943 3.0e-12 77.0 188 30.9
Rhsim07G0025100 Rhododendron simsii HOM05D001120 ORTHO05D002943 3.0e-12 77.0 320 27.2
AUR62016080 Chenopodium quinoa HOM05D001120 ORTHO05D002943 3.9e-12 76.6 186 32.3
Thecc.03G163900 Theobroma cacao HOM05D001120 ORTHO05D002943 3.9e-12 76.6 183 33.9
SGA_v2.0_scaffold51G18691 Striga asiatica HOM05D001120 ORTHO05D002943 5.1e-12 76.3 124 39.5
Aqoxy5G03734 Aquilegia oxysepala HOM05D001120 ORTHO05D002943 6.6e-12 75.9 219 30.6
CAN.G1409.5 Capsicum annuum HOM05D001120 ORTHO05D002943 6.6e-12 75.9 187 30.5
HanXRQChr05g0141341 Helianthus annuus HOM05D001120 ORTHO05D002943 6.6e-12 75.9 186 31.7
Rhsim07G0024900 Rhododendron simsii HOM05D001120 ORTHO05D002943 6.6e-12 75.9 254 28.0
Sopen03g003000 Solanum pennellii HOM05D001120 ORTHO05D002943 6.6e-12 75.9 187 30.5
Lsat_1_v5_gn_8_7961 Lactuca sativa HOM05D001120 ORTHO05D002943 8.6e-12 75.5 186 31.7
Solyc03g007000.4 Solanum lycopersicum HOM05D001120 ORTHO05D002943 8.6e-12 75.5 187 30.5
PSO478G4258 Papaver somniferum HOM05D001120 ORTHO05D002943 1.1e-11 75.1 187 30.5
arahy.Tifrunner.gnm1.ann1.0ZDL97 Arachis hypogaea HOM05D001120 ORTHO05D002943 1.5e-11 74.7 188 30.3
PSO782G3773 Papaver somniferum HOM05D001120 ORTHO05D002943 1.5e-11 74.7 187 32.1
Sc19g0001810 Simmondsia chinensis HOM05D001120 ORTHO05D002943 1.5e-11 74.7 187 29.9
EL10Ac3g05764 Beta vulgaris HOM05D001120 ORTHO05D002943 1.9e-11 74.3 185 29.7
Medtr3g006860 Medicago truncatula HOM05D001120 ORTHO05D002943 1.9e-11 74.3 187 32.6
Peaxi162Scf00192g00835 Petunia axillaris HOM05D001120 ORTHO05D002943 1.9e-11 74.3 188 30.3
arahy.Tifrunner.gnm1.ann1.16TVZ1 Arachis hypogaea HOM05D001120 ORTHO05D002943 2.5e-11 73.9 188 30.9
Ciclev10004987m.g Citrus clementina HOM05D001120 ORTHO05D002943 2.5e-11 73.9 187 29.9
Glyma.09G151800 Glycine max HOM05D001120 ORTHO05D002943 2.5e-11 73.9 188 31.4
PGSC0003DMG400031017 Solanum tuberosum HOM05D001120 ORTHO05D002943 2.5e-11 73.9 187 30.5
COL.COLO4_33196 Corchorus olitorius HOM05D001120 ORTHO05D002943 3.3e-11 73.6 322 25.2
Gohir.D07G044000 Gossypium hirsutum HOM05D001120 ORTHO05D002943 3.3e-11 73.6 257 27.6
Lalb_Chr25g0289251 Lupinus albus HOM05D001120 ORTHO05D002943 3.3e-11 73.6 189 30.2
Rhsim03G0173300 Rhododendron simsii HOM05D001120 ORTHO05D002943 3.3e-11 73.6 185 30.3
RcHm_v2.0_Chr1g0375401 Rosa chinensis HOM05D001120 ORTHO05D002943 3.3e-11 73.6 186 32.8
MD01G1187900 Malus domestica HOM05D001120 ORTHO05D002943 4.3e-11 73.2 244 29.1
Sed0024680 Sechium edule HOM05D001120 ORTHO05D002943 4.3e-11 73.2 188 29.3
Medtr6g061650 Medicago truncatula HOM05D001120 ORTHO05D002943 5.6e-11 72.8 179 32.4
Potri.012G131100 Populus trichocarpa HOM05D001120 ORTHO05D002943 5.6e-11 72.8 183 32.2
Ca_19532_v3 Cicer arietinum L. HOM05D001120 ORTHO05D002943 7.3e-11 72.4 187 31.0
ClCG05G007580 Citrullus lanatus HOM05D001120 ORTHO05D002943 7.3e-11 72.4 188 29.3
Duzib084G0753 Durio zibethinus HOM05D001120 ORTHO05D002943 7.3e-11 72.4 185 31.4
Phvul.004G125600 Phaseolus vulgaris HOM05D001120 ORTHO05D002943 7.3e-11 72.4 189 30.7
FAN06G3100 Fragaria x ananassa HOM05D001120 ORTHO05D002943 9.5e-11 72.0 188 33.5
Prupe.2G284300 Prunus persica HOM05D001120 ORTHO05D002943 9.5e-11 72.0 187 29.9
THA.LOC104806528 Tarenaya hassleriana HOM05D001120 ORTHO05D002943 9.5e-11 72.0 185 29.7
VMungo0464G0810 Vigna mungo HOM05D001120 ORTHO05D002943 9.5e-11 72.0 189 30.7
COL.COLO4_05156 Corchorus olitorius HOM05D001120 ORTHO05D002943 1.2e-10 71.6 290 24.8
Eucgr.A02865 Eucalyptus grandis HOM05D001120 ORTHO05D002943 1.2e-10 71.6 185 29.2
Actinidia13529 Actinidia chinensis HOM05D001120 ORTHO05D002943 1.6e-10 71.2 188 29.3
COL.COLO4_14203 Corchorus olitorius HOM05D001120 ORTHO05D004313 1.6e-10 71.2 179 33.5
Manes.06G139500 Manihot esculenta HOM05D001120 ORTHO05D002943 1.6e-10 71.2 186 29.6
FAN03G1927 Fragaria x ananassa HOM05D001120 ORTHO05D002943 2.1e-10 70.9 189 32.8
Hund11789 Selenicereus undatus HOM05D001120 ORTHO05D002943 2.1e-10 70.9 187 29.4
Migut.F01165 Erythranthe guttata HOM05D001120 ORTHO05D002943 2.8e-10 70.5 193 28.0
Lj6g0021937 Lotus japonicus HOM05D001120 ORTHO05D002943 2.8e-10 70.5 187 29.4
MBI12_g37712_MAGBIO Magnolia biondii HOM05D001120 ORTHO05D002943 2.8e-10 70.5 187 30.5
Mapoly0030s0021 Marchantia polymorpha HOM05D001120 ORTHO05D002943 2.8e-10 70.5 290 26.9
Aa31LG3G8190 Aethionema arabicum HOM05D001120 ORTHO05D002943 3.6e-10 70.1 189 30.7
CANSAT21G2509 Cannabis sativa HOM05D001120 ORTHO05D002943 3.6e-10 70.1 187 29.4
Dinv28521 Davidia involucrata HOM05D001120 ORTHO05D002943 3.6e-10 70.1 174 31.0
COL.COLO4_30184 Corchorus olitorius HOM05D001120 ORTHO05D002943 4.7e-10 69.7 180 30.0
ECA233G6122 Erigeron canadensis HOM05D001120 ORTHO05D002943 4.7e-10 69.7 204 29.9
AT5G51740 Arabidopsis thaliana HOM05D001120 ORTHO05D002943 6.2e-10 69.3 176 31.2
Lj8C35G5 Lonicera japonica HOM05D001120 ORTHO05D002943 6.2e-10 69.3 171 31.6
Lj2g0010051 Lotus japonicus HOM05D001120 ORTHO05D002943 6.2e-10 69.3 186 29.0
QL08p051844 Quercus lobata HOM05D001120 ORTHO05D002943 6.2e-10 69.3 309 24.9
Cpa.g.sc3.252 Carica papaya HOM05D001120 ORTHO05D002943 8.1e-10 68.9 185 30.3
Gohir.A09G178700 Gossypium hirsutum HOM05D001120 ORTHO05D002943 8.1e-10 68.9 190 30.0
Gohir.D09G174300 Gossypium hirsutum HOM05D001120 ORTHO05D002943 8.1e-10 68.9 190 30.0
Gorai.006G196300 Gossypium raimondii HOM05D001120 ORTHO05D002943 8.1e-10 68.9 190 30.0
Hma1.2p1_0488F.1_g163780 Hydrangea macrophylla HOM05D001120 ORTHO05D002943 8.1e-10 68.9 185 28.1
unitig_52.g17752 Utricularia gibba HOM05D001120 ORTHO05D002943 8.1e-10 68.9 187 29.4
Medtr6g463380 Medicago truncatula HOM05D001120 ORTHO05D002943 1.1e-09 68.6 189 30.2
PSO782G1143 Papaver somniferum HOM05D001120 ORTHO05D002943 1.1e-09 68.6 187 29.9
CANSAT21G0609 Cannabis sativa HOM05D001120 ORTHO05D002943 1.4e-09 68.2 187 29.4
Aqoxy7G00546 Aquilegia oxysepala HOM05D001120 ORTHO05D002943 1.8e-09 67.8 189 28.6
Gorai.001G047100 Gossypium raimondii HOM05D001120 ORTHO05D002943 2.3e-09 67.4 185 30.3
arahy.Tifrunner.gnm1.ann1.X1WI1D Arachis hypogaea HOM05D001120 ORTHO05D002943 3.1e-09 67.0 208 27.4
A10p09590 Brassica napus HOM05D001120 ORTHO05D002943 3.1e-09 67.0 228 25.4
FAN03G1503 Fragaria x ananassa HOM05D001120 ORTHO05D002943 3.1e-09 67.0 189 32.8
Hund04661 Selenicereus undatus HOM05D001120 ORTHO05D002943 3.1e-09 67.0 185 28.6
CDE11G0287 Ceratophyllum demersum HOM05D001120 ORTHO05D002943 4.0e-09 66.6 190 29.5
MSTRG.27147 Avicennia marina HOM05D001120 ORTHO05D002943 5.2e-09 66.2 187 29.4
Pp3c23_3440 Physcomitrium patens HOM05D001120 ORTHO05D002943 5.2e-09 66.2 192 28.6
unitig_92.g28179 Utricularia gibba HOM05D001120 ORTHO05D002943 5.2e-09 66.2 174 33.3
unitig_92.g28224 Utricularia gibba HOM05D001120 ORTHO05D002943 5.2e-09 66.2 174 33.3
CSS0048489 Camellia sinensis var. sinensis HOM05D001120 ORTHO05D002943 6.8e-09 65.9 178 30.3
Carub.0008s1176 Capsella rubella HOM05D001120 ORTHO05D002943 6.8e-09 65.9 179 30.2
PSO478G1970 Papaver somniferum HOM05D001120 ORTHO05D002943 6.8e-09 65.9 188 30.9
Rhsim09G0194100 Rhododendron simsii HOM05D001120 ORTHO05D002943 6.8e-09 65.9 186 29.0
Glyma.06G289600 Glycine max HOM05D001120 ORTHO05D002943 8.9e-09 65.5 187 31.0
AL8G26010 Arabidopsis lyrata HOM05D001120 ORTHO05D002943 1.2e-08 65.1 178 30.3
BcaC04g20640 Brassica carinata HOM05D001120 ORTHO05D002943 1.2e-08 65.1 183 29.0
C09p41150 Brassica napus HOM05D001120 ORTHO05D002943 1.2e-08 65.1 183 29.0
BolC9t56993H Brassica oleracea HOM05D001120 ORTHO05D002943 1.2e-08 65.1 183 29.0
BcaB08g35521 Brassica carinata HOM05D001120 ORTHO05D002943 1.5e-08 64.7 182 28.0
ATR0757G141 Amborella trichopoda HOM05D001120 ORTHO05D002943 2.0e-08 64.3 189 28.0
Thhalv10013554m.g Eutrema salsugineum HOM05D001120 ORTHO05D002943 2.0e-08 64.3 184 27.2
THA.LOC104811503 Tarenaya hassleriana HOM05D001120 ORTHO05D002943 4.4e-08 63.2 184 26.6
DCAR_018133 Daucus carota HOM05D001120 ORTHO05D002943 5.8e-08 62.8 192 28.6
CARHR264600 Cardamine hirsuta HOM05D001120 ORTHO05D002943 7.5e-08 62.4 188 28.2
Eucgr.A02866 Eucalyptus grandis HOM05D001120 ORTHO05D002943 7.5e-08 62.4 308 23.4
arahy.Tifrunner.gnm1.ann1.35XLXM Arachis hypogaea HOM05D001120 ORTHO05D002943 9.9e-08 62.0 188 28.2
FAN06G0604 Fragaria x ananassa HOM05D001120 ORTHO05D002943 9.9e-08 62.0 180 30.0
arahy.Tifrunner.gnm1.ann1.W17802 Arachis hypogaea HOM05D001120 ORTHO05D002943 2.9e-07 60.5 188 27.7
HPP92_007982 Vanilla planifolia HOM05D001120 ORTHO05D002943 2.9e-07 60.5 181 28.7
PSO832G4332 Papaver somniferum HOM05D001120 ORTHO05D002943 3.7e-07 60.1 280 26.8
SGA_v2.0_scaffold10G05437 Striga asiatica HOM05D001120 ORTHO05D002943 4.9e-07 59.7 169 29.0
Ca_19538_v3 Cicer arietinum L. HOM05D001120 ORTHO05D002943 1.1e-06 58.5 174 29.9
FAN06G0193 Fragaria x ananassa HOM05D001120 ORTHO05D002943 1.1e-06 58.5 176 27.8
Sabra12G0098600 Salix brachista HOM05D001120 ORTHO05D004313 1.1e-06 58.5 231 26.0
Gohir.A07G039900 Gossypium hirsutum HOM05D001120 ORTHO05D002943 2.4e-06 57.4 168 29.8
Psat1g105640 Pisum sativum HOM05D001120 ORTHO05D002943 2.4e-06 57.4 166 30.1
Dinv08003 Davidia involucrata HOM05D001120 ORTHO05D002943 3.2e-06 57.0 131 32.8
FAN06G4681 Fragaria x ananassa HOM05D001120 ORTHO05D002943 3.2e-06 57.0 183 26.8
Medtr1g029560 Medicago truncatula HOM05D001120 ORTHO05D002943 4.1e-06 56.6 170 28.2
FvH4_7g28430 Fragaria vesca HOM05D001120 ORTHO05D002943 7.1e-06 55.8 183 26.2


User provided reference genes

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