Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold43G16214 Striga asiatica HOM05D006432 ORTHO05D008257 1.0e-111 406.8 204 100.0
arahy.Tifrunner.gnm1.ann1.508QQU Arachis hypogaea HOM05D006432 ORTHO05D008257 5.1e-55 218.4 193 60.1
arahy.Tifrunner.gnm1.ann1.X8C4EZ Arachis hypogaea HOM05D006432 ORTHO05D008257 3.3e-54 215.7 190 59.5
MSTRG.9882 Avicennia marina HOM05D006432 ORTHO05D008257 7.4e-54 214.5 290 48.6
Solyc09g090330.3 Solanum lycopersicum HOM05D006432 ORTHO05D008257 1.4e-52 210.3 285 46.0
Zm00001eb114860 Zea mays HOM05D006432 ORTHO05D008257 1.8e-52 209.9 114 86.0
Migut.N00285 Erythranthe guttata HOM05D006432 ORTHO05D008257 2.4e-52 209.5 283 47.0
Nitab4.5_0000044g0560 Nicotiana tabacum HOM05D006432 ORTHO05D008257 6.9e-52 208.0 302 44.0
SGA_v2.0_scaffold370G50119 Striga asiatica HOM05D006432 ORTHO05D008257 1.5e-51 206.8 105 94.3
GSVIVG01027851001 Vitis vinifera HOM05D006432 ORTHO05D008257 3.4e-51 205.7 114 84.2
Glyma.20G207100 Glycine max HOM05D006432 ORTHO05D008257 4.5e-51 205.3 114 86.0
Thecc.04G259000 Theobroma cacao HOM05D006432 ORTHO05D008257 5.8e-51 204.9 114 83.3
Cpa.g.sc44.36 Carica papaya HOM05D006432 ORTHO05D008257 7.6e-51 204.5 109 87.2
Peaxi162Scf00392g00732 Petunia axillaris HOM05D006432 ORTHO05D008257 1.0e-50 204.1 114 84.2
Sc13g0005860 Simmondsia chinensis HOM05D006432 ORTHO05D008257 1.0e-50 204.1 114 83.3
Os11g0595200 Oryza sativa ssp. japonica HOM05D006432 ORTHO05D008257 1.3e-50 203.8 114 82.5
ClCG05G004210 Citrullus lanatus HOM05D006432 ORTHO05D008257 1.7e-50 203.4 114 85.1
Dinv27072 Davidia involucrata HOM05D006432 ORTHO05D008257 2.2e-50 203.0 114 84.2
Glyma.10G182900 Glycine max HOM05D006432 ORTHO05D008257 2.9e-50 202.6 114 85.1
Actinidia11356 Actinidia chinensis HOM05D006432 ORTHO05D008257 3.8e-50 202.2 114 84.2
CsaV3_3G011940 Cucumis sativus L. HOM05D006432 ORTHO05D008257 6.5e-50 201.4 114 84.2
MELO3C006407.2 Cucumis melo HOM05D006432 ORTHO05D008257 8.4e-50 201.1 112 84.8
Sed0005439 Sechium edule HOM05D006432 ORTHO05D008257 8.4e-50 201.1 114 82.5
CAN.G220.38 Capsicum annuum HOM05D006432 ORTHO05D008257 1.1e-49 200.7 114 80.7
Hma1.2p1_0385F.1_g141240 Hydrangea macrophylla HOM05D006432 ORTHO05D008257 1.4e-49 200.3 114 82.5
Actinidia39914 Actinidia chinensis HOM05D006432 ORTHO05D008257 1.9e-49 199.9 114 82.5
PGSC0003DMG400017164 Solanum tuberosum HOM05D006432 ORTHO05D008257 1.9e-49 199.9 284 44.4
Sopen09g033230 Solanum pennellii HOM05D006432 ORTHO05D008257 2.5e-49 199.5 314 41.7
Nitab4.5_0000596g0040 Nicotiana tabacum HOM05D006432 ORTHO05D008257 3.2e-49 199.1 295 42.4
Potri.008G169100 Populus trichocarpa HOM05D006432 ORTHO05D008257 3.2e-49 199.1 114 81.6
Cc03_g05780 Coffea canephora HOM05D006432 ORTHO05D008257 5.5e-49 198.4 114 82.5
Thhalv10021276m.g Eutrema salsugineum HOM05D006432 ORTHO05D008257 5.5e-49 198.4 114 78.9
COL.COLO4_15916 Corchorus olitorius HOM05D006432 ORTHO05D008257 7.1e-49 198.0 114 81.6
A07p09040 Brassica napus HOM05D006432 ORTHO05D008257 9.3e-49 197.6 114 78.9
AL3G38060 Arabidopsis lyrata HOM05D006432 ORTHO05D008257 1.2e-48 197.2 114 79.8
CSS0006599 Camellia sinensis var. sinensis HOM05D006432 ORTHO05D008257 1.2e-48 197.2 114 79.8
Haze_11417 Corylus avellana HOM05D006432 ORTHO05D008257 1.2e-48 197.2 114 82.5
BolC7t41898H Brassica oleracea HOM05D006432 ORTHO05D008257 1.6e-48 196.8 114 78.1
BraA07t28698Z Brassica rapa HOM05D006432 ORTHO05D008257 1.6e-48 196.8 114 78.1
Cfa014742 Carpinus fangiana HOM05D006432 ORTHO05D008257 1.6e-48 196.8 114 80.7
VMungo0720G1276 Vigna mungo HOM05D006432 ORTHO05D008257 1.6e-48 196.8 114 83.3
QL06p019206 Quercus lobata HOM05D006432 ORTHO05D008257 2.1e-48 196.4 113 81.4
Rhsim02G0041500 Rhododendron simsii HOM05D006432 ORTHO05D008257 2.7e-48 196.1 114 80.7
Ah.13g072590 Amaranthus hybridus HOM05D006432 ORTHO05D008257 3.5e-48 195.7 114 79.8
BcaC06g35517 Brassica carinata HOM05D006432 ORTHO05D008257 3.5e-48 195.7 114 77.2
Manes.15G043100 Manihot esculenta HOM05D006432 ORTHO05D008257 3.5e-48 195.7 114 79.8
Sabra08G0128900 Salix brachista HOM05D006432 ORTHO05D008257 3.5e-48 195.7 114 78.9
TWI73G0471 Tripterygium wilfordii HOM05D006432 ORTHO05D008257 3.5e-48 195.7 114 80.7
CARHR099370 Cardamine hirsuta HOM05D006432 ORTHO05D008257 4.6e-48 195.3 114 78.1
AUR62015546 Chenopodium quinoa HOM05D006432 ORTHO05D008257 4.6e-48 195.3 114 78.9
PGR031G2997 Punica granatum HOM05D006432 ORTHO05D008257 4.6e-48 195.3 114 80.7
AT3G23400 Arabidopsis thaliana HOM05D006432 ORTHO05D008257 6.0e-48 194.9 114 78.9
Carub.0003s2366 Capsella rubella HOM05D006432 ORTHO05D008257 6.0e-48 194.9 114 78.9
Sp3g21070 Schrenkiella parvula HOM05D006432 ORTHO05D008257 6.0e-48 194.9 114 77.2
MD16G1221800 Malus domestica HOM05D006432 ORTHO05D008257 7.9e-48 194.5 114 80.7
Duzib052G0458 Durio zibethinus HOM05D006432 ORTHO05D008257 1.0e-47 194.1 119 77.3
THA.LOC104804760 Tarenaya hassleriana HOM05D006432 ORTHO05D008257 1.0e-47 194.1 114 78.1
C07p14010 Brassica napus HOM05D006432 ORTHO05D008257 1.3e-47 193.7 114 77.2
Lj5g0003574 Lotus japonicus HOM05D006432 ORTHO05D008257 1.8e-47 193.4 114 79.8
AUR62002163 Chenopodium quinoa HOM05D006432 ORTHO05D008257 2.3e-47 193.0 114 78.1
FAN17G1327 Fragaria x ananassa HOM05D006432 ORTHO05D008257 2.3e-47 193.0 114 79.8
Gohir.D09G229900 Gossypium hirsutum HOM05D006432 ORTHO05D008257 2.3e-47 193.0 114 77.2
Gorai.006G252600 Gossypium raimondii HOM05D006432 ORTHO05D008257 2.3e-47 193.0 114 77.2
Psat6g122560 Pisum sativum HOM05D006432 ORTHO05D008257 2.3e-47 193.0 114 79.8
Ciclev10007095m.g Citrus clementina HOM05D006432 ORTHO05D008257 3.9e-47 192.2 114 79.8
Oeu059409.1 Olea europaea HOM05D006432 ORTHO05D008257 3.9e-47 192.2 283 45.6
Aa31LG8G9890 Aethionema arabicum HOM05D006432 ORTHO05D008257 5.1e-47 191.8 114 75.4
Medtr1g075660 Medicago truncatula HOM05D006432 ORTHO05D008257 5.1e-47 191.8 114 78.1
HPP92_005402 Vanilla planifolia HOM05D006432 ORTHO05D008257 5.1e-47 191.8 111 80.2
Eucgr.H00144 Eucalyptus grandis HOM05D006432 ORTHO05D008257 6.7e-47 191.4 114 80.7
FAN12G0128 Fragaria x ananassa HOM05D006432 ORTHO05D008257 6.7e-47 191.4 114 78.9
FAN22G0893 Fragaria x ananassa HOM05D006432 ORTHO05D008257 6.7e-47 191.4 114 78.9
Gohir.A09G228800 Gossypium hirsutum HOM05D006432 ORTHO05D008257 6.7e-47 191.4 114 76.3
MBI07_g31085_MAGBIO Magnolia biondii HOM05D006432 ORTHO05D008257 8.7e-47 191.0 114 77.2
Atru.chr4.2005 Acer truncatum HOM05D006432 ORTHO05D008257 1.1e-46 190.7 116 78.4
HanXRQChr14g0434951 Helianthus annuus HOM05D006432 ORTHO05D008257 1.9e-46 189.9 114 78.1
EL10Ac3g04982 Beta vulgaris HOM05D006432 ORTHO05D008257 2.5e-46 189.5 114 76.3
TPR.G10084 Trifolium pratense HOM05D006432 ORTHO05D008257 2.5e-46 189.5 115 76.5
vmacro15458 Vaccinium macrocarpon HOM05D006432 ORTHO05D008257 2.5e-46 189.5 114 78.9
Aqoxy5G00185 Aquilegia oxysepala HOM05D006432 ORTHO05D008257 3.3e-46 189.1 114 77.2
RcHm_v2.0_Chr4g0394281 Rosa chinensis HOM05D006432 ORTHO05D008257 3.3e-46 189.1 114 78.1
Hund11907 Selenicereus undatus HOM05D006432 ORTHO05D008257 3.3e-46 189.1 114 76.3
CDE04G3487 Ceratophyllum demersum HOM05D006432 ORTHO05D008257 4.3e-46 188.7 114 78.9
Lalb_Chr06g0169201 Lupinus albus HOM05D006432 ORTHO05D008257 4.3e-46 188.7 115 79.1
Lalb_Chr21g0312161 Lupinus albus HOM05D006432 ORTHO05D008257 4.3e-46 188.7 114 78.1
PSO478G2331 Papaver somniferum HOM05D006432 ORTHO05D008257 4.3e-46 188.7 114 78.1
Oeu055241.1 Olea europaea HOM05D000508 ORTHO05D000371 5.7e-46 188.3 179 58.7
Prupe.1G042200 Prunus persica HOM05D006432 ORTHO05D008257 5.7e-46 188.3 114 78.9
ATR0582G319 Amborella trichopoda HOM05D006432 ORTHO05D008257 7.4e-46 188.0 114 78.1
Ca_09849_v3 Cicer arietinum L. HOM05D006432 ORTHO05D008257 7.4e-46 188.0 114 77.2
CANSAT78G0744 Cannabis sativa HOM05D006432 ORTHO05D008257 9.6e-46 187.6 116 75.9
Lsat_1_v5_gn_2_40021 Lactuca sativa HOM05D006432 ORTHO05D008257 1.3e-45 187.2 114 77.2
CDE03G0089 Ceratophyllum demersum HOM05D006432 ORTHO05D008257 2.1e-45 186.4 136 66.2
CiPaw.01G181700 Carya illinoinensis HOM05D006432 ORTHO05D008257 2.8e-45 186.0 114 77.2
Lj3A686T58 Lonicera japonica HOM05D006432 ORTHO05D008257 4.8e-45 185.3 119 74.8
PSO017G5682 Papaver somniferum HOM05D006432 ORTHO05D008257 8.2e-45 184.5 114 75.4
ECA240G3223 Erigeron canadensis HOM05D002023 ORTHO05D002049 9.3e-41 171.0 107 74.8
Nn3g19719 Nelumbo nucifera HOM05D006432 ORTHO05D008257 2.5e-38 162.9 124 68.5
unitig_0.g1188 Utricularia gibba HOM05D006432 ORTHO05D008257 2.5e-38 162.9 118 67.8
Pp3c11_17240 Physcomitrium patens HOM05D006432 ORTHO05D008257 4.1e-36 155.6 114 64.0
Hma1.2p1_0385F.1_g141230 Hydrangea macrophylla HOM05D006432 ORTHO05D008257 2.9e-34 149.4 86 80.2
BcaB05g22938 Brassica carinata HOM05D006432 ORTHO05D008257 6.1e-32 141.7 81 76.5
AagrBONN_evm.TU.Sc2ySwM_228.2035 Anthoceros agrestis HOM05D006432 ORTHO05D008257 7.9e-32 141.4 116 59.5
SMO141G0176 Selaginella moellendorffii HOM05D006432 ORTHO05D008257 1.8e-31 140.2 111 62.2
SEGI_38471 Sequoiadendron giganteum HOM05D006432 ORTHO05D008257 3.9e-31 139.0 111 56.8
MD13G1216500 Malus domestica HOM05D006432 ORTHO05D008257 2.6e-30 136.3 114 59.6
BcaB02g08931 Brassica carinata HOM05D006432 ORTHO05D008257 3.3e-30 136.0 103 62.1
BcaB04g17238 Brassica carinata HOM05D006432 ORTHO05D008257 2.2e-29 133.3 82 72.0
BcaB01g01688 Brassica carinata HOM05D006432 ORTHO05D008257 3.4e-27 125.9 77 72.7
Mapoly0012s0134 Marchantia polymorpha HOM05D006432 ORTHO05D008257 5.5e-25 118.6 111 51.4
Nn1g02871 Nelumbo nucifera HOM05D006432 ORTHO05D008257 5.9e-19 98.6 57 77.2
BcaB07g33946 Brassica carinata HOM05D006432 ORTHO05D008257 1.3e-18 97.4 62 69.4
CBR_g30839 Chara braunii HOM05D006432 ORTHO05D008257 5.0e-18 95.5 122 40.2
Cre02.g143667 Chlamydomonas reinhardtii HOM05D006432 ORTHO05D008257 9.1e-12 74.7 81 50.6
Os05g0304200 Oryza sativa ssp. japonica HOM05D006432 ORTHO05D008257 6.5e-10 68.6 46 67.4
MCO05G338 Micromonas commoda HOM05D006432 ORTHO05D008257 4.2e-09 65.9 118 39.0
Sabra10G0037800 Salix brachista HOM05D006432 ORTHO05D008257 2.7e-08 63.2 39 71.8
Dinv29840 Davidia involucrata HOM05D006432 ORTHO05D008257 6.8e-07 58.5 28 89.3


User provided reference genes

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