Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold42G16104 Striga asiatica HOM05D002268 ORTHO05D006937 6.6e-287 989.9 484 100.0
SalBow5G0100 Salvia bowleyana HOM05D002268 ORTHO05D006937 1.7e-202 709.5 539 68.1
Migut.N02313 Erythranthe guttata HOM05D002268 ORTHO05D006937 5.6e-201 704.5 513 70.2
Oeu043297.4 Olea europaea HOM05D002268 ORTHO05D006937 1.1e-191 673.7 510 67.3
Nitab4.5_0006994g0060 Nicotiana tabacum HOM05D002268 ORTHO05D006937 1.4e-188 663.3 480 67.1
Nitab4.5_0005819g0070 Nicotiana tabacum HOM05D002268 ORTHO05D006937 4.1e-188 661.8 473 67.9
CAN.G956.10 Capsicum annuum HOM05D002268 ORTHO05D006937 7.1e-188 661.0 464 68.3
PGSC0003DMG400003844 Solanum tuberosum HOM05D002268 ORTHO05D006937 3.9e-186 655.2 467 67.5
Solyc09g074100.4 Solanum lycopersicum HOM05D002268 ORTHO05D006937 5.6e-185 651.4 459 68.6
Hma1.2p1_0861F.1_g229700 Hydrangea macrophylla HOM05D002268 ORTHO05D006937 9.5e-185 650.6 467 68.7
Sopen09g028920 Solanum pennellii HOM05D002268 ORTHO05D006937 2.1e-184 649.4 459 68.6
Lj2A631G13 Lonicera japonica HOM05D002268 ORTHO05D006937 1.2e-182 643.7 529 63.5
Glyma.11G133500 Glycine max HOM05D002268 ORTHO05D006937 2.9e-181 639.0 432 71.1
QL01p004788 Quercus lobata HOM05D002268 ORTHO05D006937 6.4e-181 637.9 443 69.1
Phvul.011G059600 Phaseolus vulgaris HOM05D002268 ORTHO05D006937 1.9e-180 636.3 471 67.9
CsaV3_4G024220 Cucumis sativus L. HOM05D002268 ORTHO05D006937 2.4e-180 636.0 479 66.6
Haze_23130 Corylus avellana HOM05D002268 ORTHO05D006937 5.4e-180 634.8 502 64.1
Lalb_Chr19g0138111 Lupinus albus HOM05D002268 ORTHO05D006937 7.1e-180 634.4 455 67.7
COL.COLO4_24897 Corchorus olitorius HOM05D002268 ORTHO05D006937 1.2e-179 633.6 437 69.1
vmacro19340 Vaccinium macrocarpon HOM05D002268 ORTHO05D006937 2.7e-179 632.5 490 65.9
DCAR_000723 Daucus carota HOM05D002268 ORTHO05D006937 4.6e-179 631.7 467 65.7
Cc09_g04150 Coffea canephora HOM05D002268 ORTHO05D006937 1.0e-178 630.6 516 62.6
Rhsim01G0191500 Rhododendron simsii HOM05D002268 ORTHO05D006937 1.0e-178 630.6 496 64.3
Potri.001G259000 Populus trichocarpa HOM05D002268 ORTHO05D006937 1.3e-178 630.2 482 65.4
Ca_11284_v3 Cicer arietinum L. HOM05D002268 ORTHO05D006937 1.7e-178 629.8 443 68.4
Ca_30227_v3 Cicer arietinum L. HOM05D002268 ORTHO05D006937 1.7e-178 629.8 443 68.4
Lj3g0006923 Lotus japonicus HOM05D002268 ORTHO05D006937 1.7e-178 629.8 453 67.8
Sc16g0011510 Simmondsia chinensis HOM05D002268 ORTHO05D006937 2.3e-178 629.4 471 66.2
TWI60G0297 Tripterygium wilfordii HOM05D002268 ORTHO05D006937 2.3e-178 629.4 484 65.1
Gorai.009G073000 Gossypium raimondii HOM05D002268 ORTHO05D006937 3.9e-178 628.6 475 65.9
Prupe.5G028600 Prunus persica HOM05D002268 ORTHO05D006937 3.9e-178 628.6 502 64.9
VMungo1127G0743 Vigna mungo HOM05D002268 ORTHO05D006937 3.9e-178 628.6 432 70.8
Atru.chr3.2733 Acer truncatum HOM05D002268 ORTHO05D006937 6.6e-178 627.9 496 64.7
MELO3C014598.2 Cucumis melo HOM05D002268 ORTHO05D006937 6.6e-178 627.9 481 66.1
Eucgr.B03681 Eucalyptus grandis HOM05D002268 ORTHO05D006937 8.7e-178 627.5 397 75.1
GSVIVG01025274001 Vitis vinifera HOM05D002268 ORTHO05D006937 8.7e-178 627.5 407 72.5
Ah.04g161910 Amaranthus hybridus HOM05D002268 ORTHO05D006937 1.5e-177 626.7 480 65.6
HanXRQChr07g0197481 Helianthus annuus HOM05D002268 ORTHO05D006937 1.9e-177 626.3 484 63.6
PGR102G0832 Punica granatum HOM05D002268 ORTHO05D006937 1.9e-177 626.3 467 65.7
Duzib168G2040 Durio zibethinus HOM05D002268 ORTHO05D006937 1.6e-176 623.2 420 69.5
Gohir.D05G072000 Gossypium hirsutum HOM05D002268 ORTHO05D006937 1.6e-176 623.2 467 66.0
Aqoxy1G00300 Aquilegia oxysepala HOM05D002268 ORTHO05D006937 2.8e-176 622.5 496 62.9
CiPaw.14G119300 Carya illinoinensis HOM05D002268 ORTHO05D006937 1.1e-175 620.5 495 64.4
Lsat_1_v5_gn_2_97721 Lactuca sativa HOM05D002268 ORTHO05D006937 1.4e-175 620.2 486 63.4
Medtr4g065023 Medicago truncatula HOM05D002268 ORTHO05D006937 1.4e-175 620.2 471 66.2
Psat7g212760 Pisum sativum HOM05D002268 ORTHO05D006937 1.4e-175 620.2 472 65.5
arahy.Tifrunner.gnm1.ann1.8VL3CN Arachis hypogaea HOM05D002268 ORTHO05D006937 3.1e-175 619.0 442 68.6
Sabra16G0158600 Salix brachista HOM05D002268 ORTHO05D006937 3.1e-175 619.0 447 67.8
ECA238G2081 Erigeron canadensis HOM05D002268 ORTHO05D006937 9.0e-175 617.5 446 67.3
Sed0017829 Sechium edule HOM05D002268 ORTHO05D006937 9.0e-175 617.5 482 65.4
MD03G1176400 Malus domestica HOM05D002268 ORTHO05D006937 1.2e-174 617.1 459 66.9
EL10Ac4g10275 Beta vulgaris HOM05D002268 ORTHO05D006937 2.6e-174 615.9 485 64.9
AL1G59110 Arabidopsis lyrata HOM05D002268 ORTHO05D006937 3.4e-174 615.5 490 62.7
MD11G1196700 Malus domestica HOM05D002268 ORTHO05D006937 3.4e-174 615.5 484 64.3
Nn7g36125 Nelumbo nucifera HOM05D002268 ORTHO05D006937 4.4e-174 615.1 470 65.1
arahy.Tifrunner.gnm1.ann1.VSBS4R Arachis hypogaea HOM05D002268 ORTHO05D006937 7.6e-174 614.4 442 68.1
ClCG02G023280 Citrullus lanatus HOM05D002268 ORTHO05D006937 9.9e-174 614.0 440 67.7
arahy.Tifrunner.gnm1.ann1.02894U Arachis hypogaea HOM05D002268 ORTHO05D006937 1.3e-173 613.6 465 66.5
Thhalv10011432m.g Eutrema salsugineum HOM05D002268 ORTHO05D006937 1.7e-173 613.2 469 65.9
EL10Ac4g10259 Beta vulgaris HOM05D002268 ORTHO05D006937 2.2e-173 612.8 485 64.7
BraA08t32327Z Brassica rapa HOM05D002268 ORTHO05D006937 2.9e-173 612.5 494 62.6
Cpa.g.sc84.62 Carica papaya HOM05D002268 ORTHO05D006937 2.9e-173 612.5 459 66.0
A08p02940 Brassica napus HOM05D002268 ORTHO05D006937 6.4e-173 611.3 460 65.0
AUR62019294 Chenopodium quinoa HOM05D002268 ORTHO05D006937 8.4e-173 610.9 396 72.2
arahy.Tifrunner.gnm1.ann1.AYE0CN Arachis hypogaea HOM05D002268 ORTHO05D006937 1.4e-172 610.1 450 66.0
BcaB02g11231 Brassica carinata HOM05D002268 ORTHO05D006937 1.4e-172 610.1 479 63.7
PSO384G3396 Papaver somniferum HOM05D002268 ORTHO05D006937 1.9e-172 609.8 496 63.5
arahy.Tifrunner.gnm1.ann1.6XYC84 Arachis hypogaea HOM05D002268 ORTHO05D006937 5.4e-172 608.2 446 67.7
AT1G51310 Arabidopsis thaliana HOM05D002268 ORTHO05D006937 2.7e-171 605.9 466 63.1
CARHR041380 Cardamine hirsuta HOM05D002268 ORTHO05D006937 3.5e-171 605.5 462 64.5
Actinidia06337 Actinidia chinensis HOM05D002268 ORTHO05D006937 6.0e-171 604.7 453 65.6
Carub.0001s4017 Capsella rubella HOM05D002268 ORTHO05D006937 1.0e-170 604.0 459 64.3
PSO339G2995 Papaver somniferum HOM05D002268 ORTHO05D006937 1.0e-170 604.0 474 64.6
Sp1g37990 Schrenkiella parvula HOM05D002268 ORTHO05D006937 1.0e-170 604.0 491 62.3
Carub.0008s0647 Capsella rubella HOM05D002268 ORTHO05D006937 1.3e-170 603.6 482 63.1
Aa31LG10G3500 Aethionema arabicum HOM05D002268 ORTHO05D006937 8.7e-170 600.9 464 63.6
BcaC01g01260 Brassica carinata HOM05D002268 ORTHO05D006937 1.1e-169 600.5 483 62.7
HPP92_009580 Vanilla planifolia HOM05D002268 ORTHO05D006937 7.3e-169 597.8 456 64.3
C03p89920 Brassica napus HOM05D002268 ORTHO05D006937 1.3e-168 597.0 495 61.2
BolC3t21311H Brassica oleracea HOM05D002268 ORTHO05D006937 1.3e-168 597.0 495 61.2
Os03g0174600 Oryza sativa ssp. japonica HOM05D002268 ORTHO05D006937 4.0e-167 592.0 450 64.4
FvH4_5g33050 Fragaria vesca HOM05D002268 ORTHO05D006937 2.0e-166 589.7 490 60.6
FAN18G3947 Fragaria x ananassa HOM05D002268 ORTHO05D006937 2.6e-166 589.3 493 60.4
TPR.G35035 Trifolium pratense HOM05D002268 ORTHO05D006937 2.9e-165 585.9 425 67.8
RcHm_v2.0_Chr7g0231131 Rosa chinensis HOM05D002268 ORTHO05D006937 4.9e-165 585.1 475 63.6
MBI04_g17077_MAGBIO Magnolia biondii HOM05D002268 ORTHO05D006937 1.9e-164 583.2 462 63.2
ATR0605G089 Amborella trichopoda HOM05D002268 ORTHO05D006937 5.4e-164 581.6 399 68.2
Zm00001eb005670 Zea mays HOM05D002268 ORTHO05D006937 1.2e-163 580.5 466 62.7
Manes.06G165000 Manihot esculenta HOM05D002268 ORTHO05D006937 2.7e-163 579.3 444 64.4
A05p19700 Brassica napus HOM05D002268 ORTHO05D006937 4.0e-159 565.5 428 65.4
AUR62000114 Chenopodium quinoa HOM05D002268 ORTHO05D006937 1.5e-158 563.5 439 64.0
CSS0013347 Camellia sinensis var. sinensis HOM05D002268 ORTHO05D006937 1.8e-154 550.1 370 70.0
CDE04G2511 Ceratophyllum demersum HOM05D002268 ORTHO05D006937 2.6e-150 536.2 484 56.6
BcaC05g27353 Brassica carinata HOM05D002268 ORTHO05D006937 1.1e-145 520.8 361 67.3
Lsat_1_v5_gn_2_132680 Lactuca sativa HOM05D002268 ORTHO05D006937 3.7e-144 515.8 399 63.2
Hund22033 Selenicereus undatus HOM05D002268 ORTHO05D006937 3.2e-140 502.7 626 47.1
BolC5t32017H Brassica oleracea HOM05D002268 ORTHO05D006937 5.5e-140 501.9 495 53.7
Thecc.09G232700 Theobroma cacao HOM05D002268 ORTHO05D006937 5.1e-138 495.4 378 65.3
C05p32860 Brassica napus HOM05D002268 ORTHO05D006937 5.1e-130 468.8 474 52.7
Pp3c15_1840 Physcomitrium patens HOM05D002268 ORTHO05D006937 4.1e-127 459.1 428 54.9
CSS0030827 Camellia sinensis var. sinensis HOM05D002268 ORTHO05D006937 9.1e-127 458.0 442 54.1
Mapoly0129s0019 Marchantia polymorpha HOM05D002268 ORTHO05D006937 1.2e-123 447.6 422 53.6
SEGI_13867 Sequoiadendron giganteum HOM05D002268 ORTHO05D006937 6.1e-123 445.3 357 60.5
SMO331G0070 Selaginella moellendorffii HOM05D002268 ORTHO05D006937 2.3e-122 443.4 380 57.4
Ciclev10006706m.g Citrus clementina HOM05D002268 ORTHO05D006937 1.4e-119 434.1 484 50.4
AagrBONN_evm.TU.Sc2ySwM_340.361 Anthoceros agrestis HOM05D002268 ORTHO05D006937 2.2e-117 426.8 451 49.0
Hma1.2p1_0861F.1_g229710 Hydrangea macrophylla HOM05D002268 ORTHO05D006937 2.0e-113 413.7 273 73.3
Peaxi162Scf00004g00224 Petunia axillaris HOM05D002268 ORTHO05D006937 9.7e-113 411.4 325 61.2
Dinv22182 Davidia involucrata HOM05D002268 ORTHO05D006937 2.8e-112 409.8 260 74.6
TAR369G0718 Trochodendron aralioides HOM05D002268 ORTHO05D006937 1.1e-108 397.9 264 71.2
PRCOL_00001138 Prasinoderma coloniale HOM05D002268 ORTHO05D006937 4.4e-105 386.0 382 51.3
Glyma.12G057700 Glycine max HOM05D002268 ORTHO05D006937 3.7e-104 382.9 270 68.1
MCO02G416 Micromonas commoda HOM05D002268 ORTHO05D006937 1.0e-101 374.8 437 46.0
FAN08G3580 Fragaria x ananassa HOM05D002268 ORTHO05D006937 4.2e-100 369.4 344 56.7
Actinidia26439 Actinidia chinensis HOM05D002268 ORTHO05D006937 1.2e-97 361.3 234 72.6
FAN04G1610 Fragaria x ananassa HOM05D002268 ORTHO05D006937 2.1e-91 340.5 313 56.9
Cre14.g628000 Chlamydomonas reinhardtii HOM05D002268 ORTHO05D006937 4.0e-90 336.3 538 37.2
AagrBONN_evm.TU.Sc2ySwM_368.606 Anthoceros agrestis HOM05D002268 ORTHO05D006937 3.5e-86 323.2 413 42.9
CBR_g40742 Chara braunii HOM05D002268 ORTHO05D006937 2.7e-78 297.0 432 40.0
unitig_21.g20902 Utricularia gibba HOM05D002268 ORTHO05D007950 8.6e-77 292.0 208 69.2
unitig_21.g20901 Utricularia gibba HOM05D002268 ORTHO05D006937 2.9e-72 276.9 213 65.3
Gohir.A05G069100 Gossypium hirsutum HOM05D002268 ORTHO05D006937 4.3e-68 263.1 199 68.3
BcaB04g17220 Brassica carinata HOM05D002268 ORTHO05D006937 9.5e-68 261.9 175 69.7
MSTRG.17590 Avicennia marina HOM05D002268 ORTHO05D006937 9.6e-60 235.3 219 62.1
Hma1.2p1_0861F.1_g229720 Hydrangea macrophylla HOM05D002268 ORTHO05D006937 7.6e-57 225.7 141 73.8
BcaC01g01262 Brassica carinata HOM05D002268 ORTHO05D006937 5.8e-49 199.5 289 40.8
C03p89950 Brassica napus HOM05D002268 ORTHO05D001336 9.9e-49 198.7 218 48.6
CBR_g19922 Chara braunii HOM05D002268 ORTHO05D021278 2.3e-45 187.6 297 35.7
CSS0037797 Camellia sinensis var. sinensis HOM05D002268 ORTHO05D006937 2.5e-44 184.1 112 75.9
AagrBONN_evm.TU.Sc2ySwM_117.3752 Anthoceros agrestis HOM05D002268 ORTHO05D021278 4.3e-44 183.3 343 32.7
BolC3t21314H Brassica oleracea HOM05D002268 ORTHO05D006937 4.3e-44 183.3 218 46.3
Pp3c4_6690 Physcomitrium patens HOM05D002268 ORTHO05D021278 4.5e-41 173.3 402 30.1
Mapoly0010s0199 Marchantia polymorpha HOM05D002268 ORTHO05D021278 3.9e-37 160.2 366 30.3
BraA05t20874Z Brassica rapa HOM05D002268 ORTHO05D006937 9.6e-36 155.6 138 60.9
PRCOL_00001597 Prasinoderma coloniale HOM05D002268 ORTHO05D021278 1.8e-34 151.4 399 29.1
Lsat_1_v5_gn_1_117501 Lactuca sativa HOM05D002268 ORTHO05D006937 6.5e-32 142.9 74 82.4
MCO12G105 Micromonas commoda HOM05D002268 ORTHO05D021278 6.5e-32 142.9 346 30.9
SEGI_07269 Sequoiadendron giganteum HOM05D002268 ORTHO05D006937 2.9e-24 117.5 115 51.3
SEGI_39418 Sequoiadendron giganteum HOM05D002268 ORTHO05D006937 2.7e-22 110.9 120 47.5
Nn3g21873 Nelumbo nucifera HOM05D002268 ORTHO05D006937 3.9e-21 107.1 92 58.7
Duzib150G1137 Durio zibethinus HOM05D002268 ORTHO05D006937 1.3e-16 92.0 121 50.4
C03p89940 Brassica napus HOM05D002268 ORTHO05D040778 1.4e-15 88.6 110 47.3
A08p02920 Brassica napus HOM05D002268 ORTHO05D099342 1.9e-15 88.2 99 48.5
MELO3C029180.2 Cucumis melo HOM05D002268 ORTHO05D168145 1.6e-14 85.1 239 28.5
BolC3t21313H Brassica oleracea HOM05D002268 ORTHO05D040778 1.4e-13 82.0 106 46.2
MELO3C032733.2 Cucumis melo HOM05D002268 ORTHO05D170637 1.1e-07 62.4 145 32.4
Actinidia23968 Actinidia chinensis HOM05D002268 ORTHO05D006937 3.2e-07 60.8 35 85.7
C01p11650 Brassica napus HOM05D026831 ORTHO05D011195 9.4e-07 59.3 94 41.5
C02p10780 Brassica napus HOM05D002268 ORTHO05D042165 2.1e-06 58.2 109 38.5
BolC2t12207H Brassica oleracea HOM05D002268 ORTHO05D042165 2.7e-06 57.8 124 37.9
QL06p040831 Quercus lobata HOM05D002268 ORTHO05D006937 2.7e-06 57.8 31 80.6
MELO3C035704.2 Cucumis melo HOM05D002268 ORTHO05D166817 6.1e-06 56.6 115 29.6


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