Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4257G54456 Striga asiatica HOM05D004650 ORTHO05D005715 5.9e-107 391.0 210 100.0
MSTRG.5411 Avicennia marina HOM05D004650 ORTHO05D005715 4.8e-40 168.7 235 50.6
SalBow3G4209 Salvia bowleyana HOM05D004650 ORTHO05D005715 4.9e-37 158.7 230 50.0
Oeu050697.1 Olea europaea HOM05D004650 ORTHO05D005715 3.3e-25 119.4 209 44.0
Potri.009G120900 Populus trichocarpa HOM05D004650 ORTHO05D005715 3.7e-24 115.9 236 36.9
GSVIVG01024222001 Vitis vinifera HOM05D004650 ORTHO05D005715 1.8e-23 113.6 212 39.2
Medtr1g080390 Medicago truncatula HOM05D004650 ORTHO05D005715 5.3e-23 112.1 236 40.7
Cc02_g17180 Coffea canephora HOM05D004650 ORTHO05D005715 2.6e-22 109.8 219 38.8
Glyma.13G201700 Glycine max HOM05D004650 ORTHO05D005715 2.6e-22 109.8 230 40.0
Glyma.12G236300 Glycine max HOM05D004650 ORTHO05D005715 1.0e-21 107.8 232 37.5
CSS0049841 Camellia sinensis var. sinensis HOM05D004650 ORTHO05D005715 3.8e-21 105.9 237 38.8
CiPaw.06G132000 Carya illinoinensis HOM05D004650 ORTHO05D005715 6.5e-21 105.1 238 36.1
Gohir.D13G029900 Gossypium hirsutum HOM05D004650 ORTHO05D005715 6.5e-21 105.1 248 37.1
Gorai.013G034200 Gossypium raimondii HOM05D004650 ORTHO05D005715 8.5e-21 104.8 248 36.7
Lj5C193G19 Lonicera japonica HOM05D004650 ORTHO05D005715 1.9e-20 103.6 228 38.6
vmacro02074 Vaccinium macrocarpon HOM05D004650 ORTHO05D005715 4.2e-20 102.4 236 36.9
Psat2g040720 Pisum sativum HOM05D004650 ORTHO05D005715 5.5e-20 102.1 230 34.3
VMungo1127G0931 Vigna mungo HOM05D004650 ORTHO05D005715 5.5e-20 102.1 223 38.1
MD10G1067900 Malus domestica HOM05D004650 ORTHO05D005715 7.2e-20 101.7 243 37.4
QL11p045374 Quercus lobata HOM05D004650 ORTHO05D005715 7.2e-20 101.7 235 33.6
MD05G1059700 Malus domestica HOM05D004650 ORTHO05D005715 1.6e-19 100.5 233 36.1
Manes.04G086301 Manihot esculenta HOM05D004650 ORTHO05D005715 1.6e-19 100.5 244 37.7
TAR633G2180 Trochodendron aralioides HOM05D004650 ORTHO05D005715 2.7e-19 99.8 237 36.7
COL.COLO4_26001 Corchorus olitorius HOM05D004650 ORTHO05D005715 6.1e-19 98.6 229 36.2
HanXRQChr16g0505091 Helianthus annuus HOM05D004650 ORTHO05D005715 1.4e-18 97.4 216 38.0
Lalb_Chr19g0132251 Lupinus albus HOM05D004650 ORTHO05D005715 1.8e-18 97.1 234 38.9
ClCG02G004760 Citrullus lanatus HOM05D004650 ORTHO05D005715 3.0e-18 96.3 225 36.9
Nitab4.5_0009512g0020 Nicotiana tabacum HOM05D004650 ORTHO05D005715 3.0e-18 96.3 251 33.9
Cpa.g.sc150.59 Carica papaya HOM05D004650 ORTHO05D005715 3.9e-18 95.9 242 34.7
ECA236G4812 Erigeron canadensis HOM05D004650 ORTHO05D005715 3.9e-18 95.9 219 37.4
Phvul.011G210900 Phaseolus vulgaris HOM05D004650 ORTHO05D005715 5.1e-18 95.5 234 38.0
Thecc.02G079400 Theobroma cacao HOM05D004650 ORTHO05D005715 8.8e-18 94.7 240 36.7
Lj1g0020880 Lotus japonicus HOM05D004650 ORTHO05D005715 1.1e-17 94.4 212 36.8
Lalb_Chr03g0034141 Lupinus albus HOM05D004650 ORTHO05D005715 1.1e-17 94.4 231 35.9
AUR62002225 Chenopodium quinoa HOM05D004650 ORTHO05D005715 1.5e-17 94.0 217 36.4
Nitab4.5_0003234g0030 Nicotiana tabacum HOM05D004650 ORTHO05D005715 2.0e-17 93.6 252 35.3
Aqoxy5G01524 Aquilegia oxysepala HOM05D004650 ORTHO05D005715 7.4e-17 91.7 229 36.7
Rhsim11G0181000 Rhododendron simsii HOM05D004650 ORTHO05D005715 9.7e-17 91.3 240 35.0
Sabra09G0093300 Salix brachista HOM05D004650 ORTHO05D005715 1.3e-16 90.9 222 35.1
arahy.Tifrunner.gnm1.ann1.EM89X0 Arachis hypogaea HOM05D004650 ORTHO05D005715 1.7e-16 90.5 233 36.5
MELO3C013443.2 Cucumis melo HOM05D004650 ORTHO05D005715 1.7e-16 90.5 230 33.9
Ca_23900_v3 Cicer arietinum L. HOM05D004650 ORTHO05D005715 2.2e-16 90.1 230 35.7
Peaxi162Scf00016g00358 Petunia axillaris HOM05D004650 ORTHO05D005715 2.2e-16 90.1 239 36.4
Sopen01g052180 Solanum pennellii HOM05D004650 ORTHO05D005715 2.2e-16 90.1 238 36.1
CsaV3_7G000160 Cucumis sativus L. HOM05D004650 ORTHO05D005715 3.7e-16 89.4 230 35.2
Prupe.8G089600 Prunus persica HOM05D004650 ORTHO05D005715 6.3e-16 88.6 242 29.3
Lsat_1_v5_gn_7_91680 Lactuca sativa HOM05D004650 ORTHO05D005715 1.8e-15 87.0 211 34.1
arahy.Tifrunner.gnm1.ann1.JDK4IY Arachis hypogaea HOM05D004650 ORTHO05D005715 2.4e-15 86.7 237 35.0
Haze_02320 Corylus avellana HOM05D004650 ORTHO05D005715 2.4e-15 86.7 254 33.5
Ciclev10027768m.g Citrus clementina HOM05D004650 ORTHO05D005715 3.1e-15 86.3 237 33.3
TPR.G3476 Trifolium pratense HOM05D004650 ORTHO05D005715 3.1e-15 86.3 236 36.4
Aa31LG3G140 Aethionema arabicum HOM05D004650 ORTHO05D005715 5.3e-15 85.5 226 33.2
Eucgr.I01295 Eucalyptus grandis HOM05D004650 ORTHO05D005715 9.1e-15 84.7 242 35.1
Atru.chr5.3088 Acer truncatum HOM05D004650 ORTHO05D005715 2.6e-14 83.2 233 35.2
Aqoxy4G02770 Aquilegia oxysepala HOM05D004650 ORTHO05D005715 2.6e-14 83.2 238 34.5
Gohir.A13G019000 Gossypium hirsutum HOM05D004650 ORTHO05D005715 2.6e-14 83.2 247 33.6
PSO675G4364 Papaver somniferum HOM05D004650 ORTHO05D005715 2.6e-14 83.2 238 34.9
Sed0015033 Sechium edule HOM05D004650 ORTHO05D005715 2.6e-14 83.2 227 32.2
Prupe.8G095100 Prunus persica HOM05D004650 ORTHO05D005715 3.4e-14 82.8 221 33.5
Cfa005063 Carpinus fangiana HOM05D004650 ORTHO05D005715 1.0e-13 81.3 254 31.1
Migut.G00750 Erythranthe guttata HOM05D004650 ORTHO05D005715 2.2e-13 80.1 269 31.6
AL4G10620 Arabidopsis lyrata HOM05D004650 ORTHO05D005715 1.1e-12 77.8 221 33.9
TWI75G0911 Tripterygium wilfordii HOM05D004650 ORTHO05D005715 1.1e-12 77.8 241 31.1
AUR62015438 Chenopodium quinoa HOM05D004650 ORTHO05D005715 1.4e-12 77.4 217 32.3
FAN20G2064 Fragaria x ananassa HOM05D004650 ORTHO05D005715 1.4e-12 77.4 235 29.4
FAN10G1385 Fragaria x ananassa HOM05D004650 ORTHO05D005715 1.9e-12 77.0 234 29.5
AT2G21440 Arabidopsis thaliana HOM05D004650 ORTHO05D005715 4.2e-12 75.9 231 35.1
DCAR_023026 Daucus carota HOM05D004650 ORTHO05D005715 4.2e-12 75.9 228 33.8
FAN10G4111 Fragaria x ananassa HOM05D004650 ORTHO05D005715 4.2e-12 75.9 234 29.1
FAN27G3342 Fragaria x ananassa HOM05D004650 ORTHO05D005715 4.2e-12 75.9 235 28.9
Nn5g29730 Nelumbo nucifera HOM05D004650 ORTHO05D005715 4.2e-12 75.9 235 31.5
EL10Ac3g05863 Beta vulgaris HOM05D004650 ORTHO05D005715 5.5e-12 75.5 221 30.8
FAN24G0050 Fragaria x ananassa HOM05D004650 ORTHO05D005715 5.5e-12 75.5 235 28.9
FAN15G0405 Fragaria x ananassa HOM05D004650 ORTHO05D005715 9.4e-12 74.7 234 29.9
CANSAT11G1974 Cannabis sativa HOM05D004650 ORTHO05D005715 1.2e-11 74.3 237 30.4
FvH4_7g12280 Fragaria vesca HOM05D004650 ORTHO05D005715 2.1e-11 73.6 234 28.6
MBI03_g33031_MAGBIO Magnolia biondii HOM05D004650 ORTHO05D005715 3.6e-11 72.8 243 33.3
Sp4g00610 Schrenkiella parvula HOM05D004650 ORTHO05D005715 7.9e-11 71.6 232 32.3
A04p16150 Brassica napus HOM05D004650 ORTHO05D005715 1.8e-10 70.5 224 33.5
RcHm_v2.0_Chr6g0266121 Rosa chinensis HOM05D004650 ORTHO05D005715 1.8e-10 70.5 235 28.5
FvH4_2g09800 Fragaria vesca HOM05D004650 ORTHO05D005715 2.3e-10 70.1 217 29.5
C08p41530 Brassica napus HOM05D004650 ORTHO05D005715 3.0e-10 69.7 235 30.6
BolC8t51714H Brassica oleracea HOM05D004650 ORTHO05D005715 3.0e-10 69.7 235 30.6
PGR142G2793 Punica granatum HOM05D004650 ORTHO05D005715 3.0e-10 69.7 239 30.1
Hund11840 Selenicereus undatus HOM05D004650 ORTHO05D005715 3.0e-10 69.7 233 29.6
Carub.0004s0049 Capsella rubella HOM05D004650 ORTHO05D005715 5.1e-10 68.9 229 31.4
BcaC07g41146 Brassica carinata HOM05D004650 ORTHO05D005715 8.8e-10 68.2 233 30.0
PSO541G1340 Papaver somniferum HOM05D004650 ORTHO05D005715 1.5e-09 67.4 227 31.7
BraA09t41211Z Brassica rapa HOM05D004650 ORTHO05D005715 3.3e-09 66.2 238 31.1
BraA04t17255Z Brassica rapa HOM05D004650 ORTHO05D005715 7.4e-09 65.1 216 31.0
CARHR112350 Cardamine hirsuta HOM05D004650 ORTHO05D005715 8.2e-08 61.6 237 29.5
A09p58230 Brassica napus HOM05D004650 ORTHO05D005715 4.1e-07 59.3 239 29.7


User provided reference genes

Program Settings