Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold423G51451 Striga asiatica HOM05D002102 ORTHO05D008242 2.9e-293 1011.1 505 100.0
Oeu023527.1 Olea europaea HOM05D002102 ORTHO05D008242 2.0e-47 194.5 186 60.2
Eucgr.E03887 Eucalyptus grandis HOM05D002102 ORTHO05D008242 7.7e-44 182.6 200 54.0
QL11p010809 Quercus lobata HOM05D002102 ORTHO05D008242 7.7e-44 182.6 188 54.8
Aqoxy1G01357 Aquilegia oxysepala HOM05D002102 ORTHO05D008242 1.3e-43 181.8 200 55.0
Cc09_g04620 Coffea canephora HOM05D002102 ORTHO05D008242 2.2e-43 181.0 194 54.6
Nitab4.5_0002246g0020 Nicotiana tabacum HOM05D002102 ORTHO05D008242 5.0e-43 179.9 179 57.5
Ciclev10016300m.g Citrus clementina HOM05D002102 ORTHO05D008242 6.5e-43 179.5 178 59.6
Glyma.16G094300 Glycine max HOM05D002102 ORTHO05D008242 1.1e-42 178.7 187 55.1
Peaxi162Scf00313g00048 Petunia axillaris HOM05D002102 ORTHO05D008242 2.5e-42 177.6 193 56.5
HanXRQChr09g0257721 Helianthus annuus HOM05D002102 ORTHO05D008242 3.2e-42 177.2 177 59.9
TAR627G1208 Trochodendron aralioides HOM05D002102 ORTHO05D008242 5.5e-42 176.4 186 54.3
CSS0016773 Camellia sinensis var. sinensis HOM05D002102 ORTHO05D008242 1.2e-41 175.3 187 52.4
ECA232G0416 Erigeron canadensis HOM05D002102 ORTHO05D008242 1.2e-41 175.3 186 55.4
Migut.M02036 Erythranthe guttata HOM05D002102 ORTHO05D008242 1.2e-41 175.3 176 59.7
CsaV3_6G053190 Cucumis sativus L. HOM05D002102 ORTHO05D008242 2.1e-41 174.5 188 53.2
Actinidia34700 Actinidia chinensis HOM05D002102 ORTHO05D008242 2.7e-41 174.1 184 54.3
Ca_22534_v3 Cicer arietinum L. HOM05D002102 ORTHO05D008242 2.7e-41 174.1 196 53.6
CiPaw.09G140600 Carya illinoinensis HOM05D002102 ORTHO05D008242 3.6e-41 173.7 179 57.0
Psat0s2609g0120 Pisum sativum HOM05D002102 ORTHO05D008242 3.6e-41 173.7 192 52.6
Glyma.08G267700 Glycine max HOM05D002102 ORTHO05D008242 4.7e-41 173.3 189 54.5
CANSAT35G0655 Cannabis sativa HOM05D002102 ORTHO05D008242 6.1e-41 172.9 192 51.0
MELO3C006996.2 Cucumis melo HOM05D002102 ORTHO05D008242 6.1e-41 172.9 222 49.1
FAN21G2948 Fragaria x ananassa HOM05D002102 ORTHO05D008242 7.9e-41 172.6 156 60.3
Lj4g0016411 Lotus japonicus HOM05D002102 ORTHO05D008242 7.9e-41 172.6 186 53.2
Nn7g38425 Nelumbo nucifera HOM05D002102 ORTHO05D008242 7.9e-41 172.6 201 51.7
MD10G1224400 Malus domestica HOM05D002102 ORTHO05D008242 1.4e-40 171.8 186 53.8
arahy.Tifrunner.gnm1.ann1.1TYS6L Arachis hypogaea HOM05D002102 ORTHO05D008242 1.8e-40 171.4 177 55.9
Medtr8g070680 Medicago truncatula HOM05D002102 ORTHO05D008242 1.8e-40 171.4 178 56.2
GSVIVG01037088001 Vitis vinifera HOM05D002102 ORTHO05D008242 1.8e-40 171.4 191 52.4
arahy.Tifrunner.gnm1.ann1.N8G6CJ Arachis hypogaea HOM05D002102 ORTHO05D008242 2.3e-40 171.0 177 55.4
Manes.03G073000 Manihot esculenta HOM05D002102 ORTHO05D008242 3.0e-40 170.6 177 53.1
PGR004G2223 Punica granatum HOM05D002102 ORTHO05D008242 3.0e-40 170.6 187 53.5
Haze_05188 Corylus avellana HOM05D002102 ORTHO05D008242 5.2e-40 169.9 229 50.2
Lalb_Chr21g0315091 Lupinus albus HOM05D002102 ORTHO05D008242 5.2e-40 169.9 182 52.7
PSO541G0118 Papaver somniferum HOM05D002102 ORTHO05D008242 5.2e-40 169.9 166 56.0
Rhsim02G0171500 Rhododendron simsii HOM05D002102 ORTHO05D008242 5.2e-40 169.9 179 57.0
Cpa.g.sc30.78 Carica papaya HOM05D002102 ORTHO05D008242 8.8e-40 169.1 196 53.1
Phvul.003G275400 Phaseolus vulgaris HOM05D002102 ORTHO05D008242 8.8e-40 169.1 214 50.0
TWI63G1577 Tripterygium wilfordii HOM05D002102 ORTHO05D008242 8.8e-40 169.1 177 55.4
PGSC0003DMG402011260 Solanum tuberosum HOM05D002102 ORTHO05D008242 1.1e-39 168.7 192 52.1
Lsat_1_v5_gn_8_106940 Lactuca sativa HOM05D002102 ORTHO05D008242 1.5e-39 168.3 183 54.1
Sed0010823 Sechium edule HOM05D002102 ORTHO05D008242 2.0e-39 167.9 182 53.8
Duzib132G0691 Durio zibethinus HOM05D002102 ORTHO05D008242 3.3e-39 167.2 137 67.2
EL10Ac4g09967 Beta vulgaris HOM05D002102 ORTHO05D008242 4.4e-39 166.8 194 51.0
Aa31LG9G8520 Aethionema arabicum HOM05D002102 ORTHO05D008242 5.7e-39 166.4 180 53.9
FAN16G2960 Fragaria x ananassa HOM05D002102 ORTHO05D008242 9.7e-39 165.6 182 52.7
RcHm_v2.0_Chr5g0021821 Rosa chinensis HOM05D002102 ORTHO05D008242 9.7e-39 165.6 183 52.5
Thhalv10000983m.g Eutrema salsugineum HOM05D002102 ORTHO05D008242 1.3e-38 165.2 178 52.2
Gorai.005G268700 Gossypium raimondii HOM05D002102 ORTHO05D008242 1.3e-38 165.2 201 51.2
vmacro11020 Vaccinium macrocarpon HOM05D002102 ORTHO05D008242 1.3e-38 165.2 202 50.5
FAN25G3128 Fragaria x ananassa HOM05D002102 ORTHO05D008242 1.7e-38 164.9 179 53.1
Gohir.A03G218300 Gossypium hirsutum HOM05D002102 ORTHO05D008242 2.2e-38 164.5 189 51.9
Gohir.D02G240400 Gossypium hirsutum HOM05D002102 ORTHO05D008242 2.8e-38 164.1 190 53.2
Os01g0798500 Oryza sativa ssp. japonica HOM05D002102 ORTHO05D008242 2.8e-38 164.1 183 52.5
Potri.001G074200 Populus trichocarpa HOM05D002102 ORTHO05D008242 2.8e-38 164.1 178 54.5
FvH4_3g13341 Fragaria vesca HOM05D002102 ORTHO05D008242 3.7e-38 163.7 179 52.5
FAN11G2372 Fragaria x ananassa HOM05D002102 ORTHO05D008242 3.7e-38 163.7 179 52.5
Sc24g0002820 Simmondsia chinensis HOM05D002102 ORTHO05D008242 3.7e-38 163.7 150 62.0
Sabra01G0052500 Salix brachista HOM05D002102 ORTHO05D008242 4.8e-38 163.3 178 55.1
ClCG01G025950 Citrullus lanatus HOM05D002102 ORTHO05D008242 6.3e-38 162.9 188 52.1
Thecc.02G001200 Theobroma cacao HOM05D002102 ORTHO05D008242 8.2e-38 162.5 175 54.9
Zm00001eb150810 Zea mays HOM05D002102 ORTHO05D008242 8.2e-38 162.5 209 48.8
PSO170G6365 Papaver somniferum HOM05D002102 ORTHO05D008242 1.1e-37 162.2 193 48.7
PSO675G4370 Papaver somniferum HOM05D002102 ORTHO05D008242 1.4e-37 161.8 193 48.7
Nitab4.5_0001299g0100 Nicotiana tabacum HOM05D002102 ORTHO05D008242 1.8e-37 161.4 152 59.9
Solyc10g005180.3 Solanum lycopersicum HOM05D002102 ORTHO05D008242 1.8e-37 161.4 178 52.2
Atru.chr10.236 Acer truncatum HOM05D002102 ORTHO05D008242 2.4e-37 161.0 148 58.1
TPR.G19825 Trifolium pratense HOM05D002102 ORTHO05D008242 2.4e-37 161.0 180 53.3
ATR0073G005 Amborella trichopoda HOM05D002102 ORTHO05D008242 3.1e-37 160.6 166 56.6
Ah.06g191610 Amaranthus hybridus HOM05D002851 ORTHO05D003084 4.1e-37 160.2 194 51.5
CARHR178230 Cardamine hirsuta HOM05D002102 ORTHO05D008242 4.1e-37 160.2 178 52.2
Sp2g09460 Schrenkiella parvula HOM05D002102 ORTHO05D008242 9.1e-37 159.1 178 50.6
BcaC06g31600 Brassica carinata HOM05D002102 ORTHO05D008242 1.2e-36 158.7 182 49.5
CDE11G0809 Ceratophyllum demersum HOM05D002102 ORTHO05D008242 1.6e-36 158.3 235 45.5
BcaC06g34527 Brassica carinata HOM05D002102 ORTHO05D008242 3.5e-36 157.1 183 50.3
A06p47030 Brassica napus HOM05D002102 ORTHO05D008242 3.5e-36 157.1 183 50.3
C07p27540 Brassica napus HOM05D002102 ORTHO05D008242 3.5e-36 157.1 183 50.3
BolC7t43285H Brassica oleracea HOM05D002102 ORTHO05D008242 3.5e-36 157.1 183 50.3
AT5G44650 Arabidopsis thaliana HOM05D002102 ORTHO05D008242 4.5e-36 156.8 182 48.9
Carub.0008s0361 Capsella rubella HOM05D002102 ORTHO05D008242 4.5e-36 156.8 187 50.3
BcaB07g30508 Brassica carinata HOM05D002102 ORTHO05D008242 5.9e-36 156.4 182 49.5
Prupe.4G120800 Prunus persica HOM05D002102 ORTHO05D008242 1.0e-35 155.6 180 51.7
AL8G14900 Arabidopsis lyrata HOM05D002102 ORTHO05D008242 1.3e-35 155.2 178 50.6
COL.COLO4_25027 Corchorus olitorius HOM05D002102 ORTHO05D008242 3.8e-35 153.7 154 59.1
Sopen10g001170 Solanum pennellii HOM05D002102 ORTHO05D008242 1.5e-34 151.8 145 57.2
BraA06t27576Z Brassica rapa HOM05D002102 ORTHO05D008242 3.2e-34 150.6 202 44.6
unitig_92.g28193 Utricularia gibba HOM05D002594 ORTHO05D003499 1.6e-33 148.3 200 48.0
MBI02_g17886_MAGBIO Magnolia biondii HOM05D002102 ORTHO05D008242 1.0e-32 145.6 164 52.4
Dinv17885 Davidia involucrata HOM05D002102 ORTHO05D008242 9.7e-31 139.0 156 55.1
DCAR_001256 Daucus carota HOM05D002102 ORTHO05D008242 3.7e-30 137.1 135 57.0
PGSC0003DMG401011260 Solanum tuberosum HOM05D002102 ORTHO05D008242 1.7e-27 128.3 155 49.7
Lj1A1152G38 Lonicera japonica HOM05D002102 ORTHO05D008242 1.5e-26 125.2 147 52.4
Mapoly0033s0150 Marchantia polymorpha HOM05D002102 ORTHO05D008242 9.8e-23 112.5 196 39.8
AUR62040994 Chenopodium quinoa HOM05D002102 ORTHO05D008242 4.8e-22 110.2 123 52.0
AUR62042810 Chenopodium quinoa HOM05D002102 ORTHO05D008242 1.4e-21 108.6 121 52.1
Oeu011782.1 Olea europaea HOM05D002102 ORTHO05D008242 3.1e-21 107.5 121 56.2
Eucgr.L03440 Eucalyptus grandis HOM05D002102 ORTHO05D008242 4.1e-21 107.1 86 66.3
Pp3c15_7910 Physcomitrium patens HOM05D002102 ORTHO05D008242 5.4e-21 106.7 195 39.5
AagrBONN_evm.TU.Sc2ySwM_368.1584 Anthoceros agrestis HOM05D002102 ORTHO05D008242 7.0e-21 106.3 165 41.2
Hund01844 Selenicereus undatus HOM05D002102 ORTHO05D008242 5.9e-20 103.2 65 78.5
HPP92_001585 Vanilla planifolia HOM05D002102 ORTHO05D008242 2.9e-19 100.9 153 43.1
RcHm_v2.0_Chr5g0021971 Rosa chinensis HOM05D002102 ORTHO05D008242 1.1e-18 99.0 76 67.1
RcHm_v2.0_Chr5g0021891 Rosa chinensis HOM05D002102 ORTHO05D008242 2.5e-18 97.8 84 59.5
HPP92_001768 Vanilla planifolia HOM05D001389 ORTHO05D002892 2.1e-17 94.7 79 60.8
Actinidia31356 Actinidia chinensis HOM05D002102 ORTHO05D008242 5.2e-16 90.1 63 73.0
Actinidia31357 Actinidia chinensis HOM05D002102 ORTHO05D008242 2.6e-15 87.8 86 57.0
MD05G1242600 Malus domestica HOM05D002102 ORTHO05D008242 4.4e-15 87.0 66 69.7
MD05G1242700 Malus domestica HOM05D002102 ORTHO05D004119 4.4e-15 87.0 81 56.8
SEGI_24162 Sequoiadendron giganteum HOM05D002102 ORTHO05D008242 1.0e-11 75.9 79 49.4
RcHm_v2.0_Chr5g0021961 Rosa chinensis HOM05D002102 ORTHO05D008242 1.7e-11 75.1 52 67.3
ATR0109G022 Amborella trichopoda HOM05D002102 ORTHO05D008242 3.8e-11 73.9 86 47.7
RcHm_v2.0_Chr5g0021881 Rosa chinensis HOM05D002102 ORTHO05D008242 3.8e-11 73.9 53 66.0
RcHm_v2.0_Chr5g0021951 Rosa chinensis HOM05D002102 ORTHO05D008242 1.5e-10 72.0 52 65.4
Nitab4.5_0007687g0040 Nicotiana tabacum HOM05D002102 ORTHO05D008242 3.6e-09 67.4 41 80.5
CBR_g21832 Chara braunii HOM05D002102 ORTHO05D008242 1.5e-07 62.0 164 29.3
Cre06.g280650 Chlamydomonas reinhardtii HOM05D002102 ORTHO05D008242 5.7e-07 60.1 74 45.9
SGA_v2.0_scaffold17G07923 Striga asiatica HOM05D060470 ORTHO05D051374 5.7e-07 60.1 51 54.9
CANSAT25G0241 Cannabis sativa HOM05D002102 ORTHO05D008242 1.7e-06 58.5 43 69.8
Nitab4.5_0001815g0140 Nicotiana tabacum HOM05D002102 ORTHO05D004119 2.9e-06 57.8 51 60.8
BcaC03g16684 Brassica carinata HOM05D002102 ORTHO05D008242 4.9e-06 57.0 95 42.1
C02p45240 Brassica napus HOM05D002102 ORTHO05D008242 4.9e-06 57.0 95 42.1


User provided reference genes

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