Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold420G51405 Striga asiatica HOM05D004291 ORTHO05D005620 1.9e-124 449.1 217 100.0
HanXRQMTg0579681 Helianthus annuus HOM05D004291 ORTHO05D005620 1.1e-55 220.7 169 71.0
Ah.10g028620 Amaranthus hybridus HOM05D004291 ORTHO05D005620 2.4e-55 219.5 128 85.2
Ah.10g028820 Amaranthus hybridus HOM05D004291 ORTHO05D005620 2.4e-55 219.5 128 85.2
PGSC0003DMG400013864 Solanum tuberosum HOM05D004291 ORTHO05D005620 2.4e-55 219.5 136 80.9
Dinv06711 Davidia involucrata HOM05D004291 ORTHO05D005620 7.1e-55 218.0 127 85.8
Medtr0212s0040 Medicago truncatula HOM05D000743 ORTHO05D000580 1.1e-52 210.7 132 81.1
SHI09335 Sapria himalayana HOM05D004291 ORTHO05D005620 1.5e-52 210.3 189 61.9
Psat3g172200 Pisum sativum HOM05D004291 ORTHO05D005620 4.3e-52 208.8 132 80.3
RcHm_v2.0_MTg0498571 Rosa chinensis HOM05D004291 ORTHO05D005620 4.3e-52 208.8 132 80.3
arahy.Tifrunner.gnm1.ann1.4JQ3QL Arachis hypogaea HOM05D004291 ORTHO05D005620 9.6e-52 207.6 129 81.4
arahy.Tifrunner.gnm1.ann1.8KX3ZR Arachis hypogaea HOM05D004291 ORTHO05D005620 9.6e-52 207.6 129 81.4
arahy.Tifrunner.gnm1.ann1.C5IA5B Arachis hypogaea HOM05D004291 ORTHO05D005620 9.6e-52 207.6 129 81.4
arahy.Tifrunner.gnm1.ann1.E3XYYX Arachis hypogaea HOM05D004291 ORTHO05D005620 9.6e-52 207.6 129 81.4
arahy.Tifrunner.gnm1.ann1.I3FVC7 Arachis hypogaea HOM05D004291 ORTHO05D005620 9.6e-52 207.6 129 81.4
arahy.Tifrunner.gnm1.ann1.K8XT55 Arachis hypogaea HOM05D004291 ORTHO05D005620 9.6e-52 207.6 129 81.4
Lalb_Chr00c21g0405651 Lupinus albus HOM05D004291 ORTHO05D005620 1.6e-51 206.8 129 80.6
Lalb_Chr00c24g0407111 Lupinus albus HOM05D004291 ORTHO05D005620 1.6e-51 206.8 129 80.6
Lj5g0026615 Lotus japonicus HOM05D004291 ORTHO05D005620 3.6e-51 205.7 128 81.2
LjContig00315g0005528 Lotus japonicus HOM05D004291 ORTHO05D005620 3.6e-51 205.7 128 81.2
CsaV3_5G015800 Cucumis sativus L. HOM05D004291 ORTHO05D005620 6.2e-51 204.9 132 78.8
DCAR_032452 Daucus carota HOM05D004291 ORTHO05D005620 6.2e-51 204.9 132 80.3
PGSC0003DMG401031302 Solanum tuberosum HOM05D004291 ORTHO05D005620 1.1e-50 204.1 126 81.0
ATMG00160 Arabidopsis thaliana HOM05D004291 ORTHO05D005620 6.9e-50 201.4 132 78.0
CARHR282690 Cardamine hirsuta HOM05D004291 ORTHO05D005620 6.9e-50 201.4 132 78.0
RhsimMtG0001900 Rhododendron simsii HOM05D004291 ORTHO05D005620 4.5e-49 198.7 134 76.9
arahy.Tifrunner.gnm1.ann1.81GM5H Arachis hypogaea HOM05D004291 ORTHO05D005620 7.6e-49 198.0 122 82.0
arahy.Tifrunner.gnm1.ann1.86CJ1T Arachis hypogaea HOM05D004291 ORTHO05D005620 7.6e-49 198.0 122 82.0
Lsat_1_v5_gn_6_95160 Lactuca sativa HOM05D004291 ORTHO05D005620 7.6e-49 198.0 121 83.5
Ca_31296_v3 Cicer arietinum L. HOM05D004291 ORTHO05D005620 4.9e-48 195.3 123 79.7
Nn1g09987 Nelumbo nucifera HOM05D004291 ORTHO05D005620 4.9e-48 195.3 132 78.0
arahy.Tifrunner.gnm1.ann1.5E6QYU Arachis hypogaea HOM05D004291 ORTHO05D005620 6.4e-48 194.9 120 81.7
arahy.Tifrunner.gnm1.ann1.JQU8UC Arachis hypogaea HOM05D004291 ORTHO05D005620 6.4e-48 194.9 120 81.7
Psat1g132320 Pisum sativum HOM05D004291 ORTHO05D007972 8.4e-48 194.5 126 75.4
CANSAT16G0053 Cannabis sativa HOM05D004291 ORTHO05D005620 1.4e-47 193.7 132 77.3
Ca_03780_v3 Cicer arietinum L. HOM05D004291 ORTHO05D005620 1.4e-47 193.7 121 80.2
Sed0021216 Sechium edule HOM05D004291 ORTHO05D005620 3.2e-47 192.6 132 75.8
arahy.Tifrunner.gnm1.ann1.NTK3LG Arachis hypogaea HOM05D004291 ORTHO05D005620 1.2e-46 190.7 120 80.8
Thhalv10023011m.g Eutrema salsugineum HOM05D004291 ORTHO05D005620 1.2e-46 190.7 132 75.0
TPR.G581 Trifolium pratense HOM05D004291 ORTHO05D005620 3.5e-46 189.1 117 81.2
VMungo1309G0827 Vigna mungo HOM05D004291 ORTHO05D005620 5.1e-45 185.3 125 72.0
Glyma.09G040100 Glycine max HOM05D004291 ORTHO05D005620 6.7e-45 184.9 125 72.8
Phvul.009G252600 Phaseolus vulgaris HOM05D004291 ORTHO05D005620 4.3e-44 182.2 125 71.2
Migut.J01259 Erythranthe guttata HOM05D004291 ORTHO05D005620 7.4e-44 181.4 105 84.8
unitig_87.g27941 Utricularia gibba HOM05D004291 ORTHO05D005620 7.4e-44 181.4 105 84.8
Potri.007G061781 Populus trichocarpa HOM05D004291 ORTHO05D005620 1.3e-43 180.6 121 75.2
Psat0s4951g0120 Pisum sativum HOM05D004291 ORTHO05D005620 3.1e-42 176.0 131 71.8
SGA_v2.0_scaffold245G44781 Striga asiatica HOM05D004291 ORTHO05D005620 3.1e-42 176.0 105 83.8
GSVIVG01006909001 Vitis vinifera HOM05D004291 ORTHO05D005620 4.0e-42 175.6 112 78.6
Sopen00g002740 Solanum pennellii HOM05D004291 ORTHO05D005620 5.3e-42 175.3 143 66.4
Gorai.001G161700 Gossypium raimondii HOM05D004291 ORTHO05D005620 3.4e-41 172.6 104 82.7
LjContig00315g0005262 Lotus japonicus HOM05D004291 ORTHO05D005620 4.9e-40 168.7 128 71.1
Sed0009617 Sechium edule HOM05D004291 ORTHO05D005620 6.4e-40 168.3 104 80.8
Sed0022989 Sechium edule HOM05D004291 ORTHO05D005620 6.4e-40 168.3 104 80.8
A04p09440 Brassica napus HOM05D004291 ORTHO05D005620 2.4e-39 166.4 104 79.8
A04p09530 Brassica napus HOM05D004291 ORTHO05D005620 2.4e-39 166.4 104 79.8
BolSC28t60319H Brassica oleracea HOM05D004291 ORTHO05D005620 2.4e-39 166.4 104 79.8
BolSC28t60374H Brassica oleracea HOM05D004291 ORTHO05D005620 2.4e-39 166.4 104 79.8
BraSC48t46243Z Brassica rapa HOM05D004291 ORTHO05D005620 2.4e-39 166.4 104 79.8
BraSC48t46334Z Brassica rapa HOM05D004291 ORTHO05D005620 2.4e-39 166.4 104 79.8
BraSC54t46353Z Brassica rapa HOM05D004291 ORTHO05D005620 2.4e-39 166.4 104 79.8
BraSC54t46371Z Brassica rapa HOM05D004291 ORTHO05D005620 2.4e-39 166.4 104 79.8
Nitab4.5_0000280g0210 Nicotiana tabacum HOM05D004291 ORTHO05D005620 2.4e-39 166.4 136 63.2
CAN.G184.83 Capsicum annuum HOM05D004291 ORTHO05D005620 5.5e-39 165.2 113 74.3
Sopen00g002770 Solanum pennellii HOM05D004291 ORTHO05D005620 7.1e-39 164.9 107 77.6
Lalb_Chr24g0400601 Lupinus albus HOM05D004291 ORTHO05D005620 3.0e-37 159.5 103 77.7
Nitab4.5_0007876g0040 Nicotiana tabacum HOM05D004291 ORTHO05D005620 3.0e-37 159.5 132 61.4
AL8G12400 Arabidopsis lyrata HOM05D004291 ORTHO05D005620 3.9e-37 159.1 106 75.5
AUR62042348 Chenopodium quinoa HOM05D004291 ORTHO05D005620 1.5e-36 157.1 97 80.4
Solyc09g015880.4 Solanum lycopersicum HOM05D004291 ORTHO05D005620 2.1e-35 153.3 82 87.8
CAN.G8.27 Capsicum annuum HOM05D004291 ORTHO05D005620 5.3e-34 148.7 74 93.2
Eucgr.I01856 Eucalyptus grandis HOM05D004291 ORTHO05D005620 1.2e-33 147.5 95 78.9
Cfa021332 Carpinus fangiana HOM05D004291 ORTHO05D005620 5.8e-33 145.2 93 79.6
Nitab4.5_0001819g0010 Nicotiana tabacum HOM05D004291 ORTHO05D005620 1.1e-31 141.0 92 72.8
Oeu042472.1 Olea europaea HOM05D004291 ORTHO05D005620 1.9e-31 140.2 119 58.8
SabraMtG0008700 Salix brachista HOM05D004291 ORTHO05D005620 7.1e-31 138.3 94 74.5
Nitab4.5_0000309g0180 Nicotiana tabacum HOM05D001987 ORTHO05D005620 6.0e-30 135.2 88 73.9
Mapoly0041s0129 Marchantia polymorpha HOM05D004291 ORTHO05D005620 7.9e-30 134.8 76 81.6
TAR022G0001 Trochodendron aralioides HOM05D004291 ORTHO05D005620 3.9e-29 132.5 123 53.7
BolSC28t60391H Brassica oleracea HOM05D004291 ORTHO05D005620 2.5e-28 129.8 84 76.2
CAN.G1897.5 Capsicum annuum HOM05D004291 ORTHO05D005620 4.3e-28 129.0 98 67.3
CDE02G1233 Ceratophyllum demersum HOM05D004291 ORTHO05D005620 4.8e-27 125.6 85 74.1
AUR62001625 Chenopodium quinoa HOM05D004291 ORTHO05D005620 3.1e-26 122.9 84 73.8
MELO3C030794.2 Cucumis melo HOM05D004291 ORTHO05D005620 2.0e-25 120.2 68 82.4
Cre01.g049500 Chlamydomonas reinhardtii HOM05D004291 ORTHO05D005620 1.3e-24 117.5 113 51.3
Psat0s3560g0080 Pisum sativum HOM05D000533 ORTHO05D002807 1.3e-24 117.5 95 63.2
BraSC54t46377Z Brassica rapa HOM05D004291 ORTHO05D005620 7.2e-23 111.7 76 75.0
CAN.G1449.6 Capsicum annuum HOM05D004291 ORTHO05D005620 2.1e-22 110.2 59 81.4
Hma1.2p1_0716F.1_g208050 Hydrangea macrophylla HOM05D004291 ORTHO05D005620 6.1e-22 108.6 72 76.4
Nitab4.5_0000007g0310 Nicotiana tabacum HOM05D004291 ORTHO05D005620 6.1e-22 108.6 70 74.3
Ca_16076_v3 Cicer arietinum L. HOM05D004291 ORTHO05D005620 1.9e-20 103.6 54 87.0
FAN04G2782 Fragaria x ananassa HOM05D003397 ORTHO05D004390 4.3e-20 102.4 58 81.0
ATR0513G001 Amborella trichopoda HOM05D004291 ORTHO05D005620 5.7e-20 102.1 56 87.5
CAN.G15876.1 Capsicum annuum HOM05D004291 ORTHO05D005620 1.3e-19 100.9 71 60.6
SMO053G0014 Selaginella moellendorffii HOM05D004291 ORTHO05D005620 7.7e-17 91.7 103 48.5
Solyc05g045870.2 Solanum lycopersicum HOM05D004291 ORTHO05D005620 1.7e-16 90.5 79 62.0
HanXRQMTg0579451 Helianthus annuus HOM05D004291 ORTHO05D005620 2.2e-16 90.1 67 71.6
RcHm_v2.0_MTg0498241 Rosa chinensis HOM05D004291 ORTHO05D005620 2.3e-13 80.1 65 69.2
VMungo1309G2873 Vigna mungo HOM05D000045 ORTHO05D001346 3.9e-13 79.3 72 56.9
Nitab4.5_0008535g0030 Nicotiana tabacum HOM05D000435 ORTHO05D013824 2.6e-12 76.6 62 62.9
CAN.G1173.2 Capsicum annuum HOM05D004291 ORTHO05D005620 5.7e-12 75.5 60 66.7
Nn1g09999 Nelumbo nucifera HOM05D004291 ORTHO05D005620 4.8e-11 72.4 75 57.3
Nn1g10072 Nelumbo nucifera HOM05D004291 ORTHO05D005620 4.8e-11 72.4 75 57.3
Peaxi162Scf00268g01210 Petunia axillaris HOM05D004291 ORTHO05D005620 8.2e-11 71.6 36 86.1
ATR0461G001 Amborella trichopoda HOM05D004291 ORTHO05D005620 3.4e-09 66.2 34 91.2
TAR371G1150 Trochodendron aralioides HOM05D004291 ORTHO05D005620 1.3e-08 64.3 47 68.1
Lalb_Chr23g0276811 Lupinus albus HOM05D004291 ORTHO05D005620 1.7e-08 63.9 36 86.1
Nitab4.5_0000216g0120 Nicotiana tabacum HOM05D004291 ORTHO05D005620 1.9e-07 60.5 29 89.7


User provided reference genes

Program Settings