Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold420G51396 Striga asiatica HOM05D009122 ORTHO05D011085 1.0e-139 500.0 234 100.0
Manes.13G092620 Manihot esculenta HOM05D000003 ORTHO05D000004 7.0e-16 88.6 130 31.5
Thecc.06G023800 Theobroma cacao HOM05D000003 ORTHO05D000006 2.3e-14 83.6 143 28.7
THA.LOC104799794 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 1.1e-13 81.3 142 28.9
Manes.12G129601 Manihot esculenta HOM05D000003 ORTHO05D011148 3.2e-13 79.7 166 25.9
Psat2g135320 Pisum sativum HOM05D009122 ORTHO05D011085 2.1e-12 77.0 152 31.6
Manes.11G092701 Manihot esculenta HOM05D000003 ORTHO05D011085 3.6e-12 76.3 127 28.3
TPR.G12894 Trifolium pratense HOM05D000003 ORTHO05D000004 5.2e-11 72.4 126 31.0
LjContig00357g0004525 Lotus japonicus HOM05D000003 ORTHO05D000022 1.5e-10 70.9 168 28.6
Medtr1g054775 Medicago truncatula HOM05D000003 ORTHO05D000004 1.5e-10 70.9 150 24.7
Atru.chr7.949 Acer truncatum HOM05D000003 ORTHO05D000022 2.6e-10 70.1 139 29.5
TPR.G1544 Trifolium pratense HOM05D000563 ORTHO05D000536 3.4e-10 69.7 108 33.3
SGA_v2.0_scaffold245G44469 Striga asiatica HOM05D000003 ORTHO05D000022 7.5e-10 68.6 147 27.9
Atru.chr10.857 Acer truncatum HOM05D000003 ORTHO05D000004 8.3e-09 65.1 188 23.9
COL.COLO4_01156 Corchorus olitorius HOM05D000003 ORTHO05D000004 8.3e-09 65.1 140 28.6
Thecc.05G092600 Theobroma cacao HOM05D000024 ORTHO05D000006 1.1e-08 64.7 129 31.8
TWI38G0333 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 2.4e-08 63.5 195 22.6
RcHm_v2.0_Chr1g0351011 Rosa chinensis HOM05D000003 ORTHO05D000004 3.1e-08 63.2 165 26.1
Psat7g241280 Pisum sativum HOM05D000003 ORTHO05D000004 4.1e-08 62.8 150 26.7
TWI81G0242 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.6e-07 60.8 167 25.1
COL.COLO4_21884 Corchorus olitorius HOM05D000003 ORTHO05D000004 7.8e-07 58.5 165 23.0
Lj5g0009009 Lotus japonicus HOM05D000003 ORTHO05D000007 1.0e-06 58.2 91 33.0
CiPaw.08G120100 Carya illinoinensis HOM05D000003 ORTHO05D000004 2.9e-06 56.6 110 31.8
Thecc.10G074500 Theobroma cacao HOM05D000003 ORTHO05D000004 2.9e-06 56.6 124 26.6
CSS0049107 Camellia sinensis var. sinensis HOM05D006120 ORTHO05D007913 8.6e-06 55.1 165 26.7


User provided reference genes

Program Settings