Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold420G51390 Striga asiatica HOM05D003517 ORTHO05D009798 1.3e-216 756.1 378 100.0
Lj2P1236T76 Lonicera japonica HOM05D003517 ORTHO05D009798 8.9e-154 547.4 335 86.3
CAN.G110.13 Capsicum annuum HOM05D003517 ORTHO05D009798 8.3e-152 540.8 332 86.7
Solyc00g021640.2 Solanum lycopersicum HOM05D003517 ORTHO05D009798 2.0e-150 536.2 332 86.1
LjContig00439g0008559 Lotus japonicus HOM05D003517 ORTHO05D009798 1.7e-149 533.1 333 85.0
Lj5g0015285 Lotus japonicus HOM05D003517 ORTHO05D009798 6.6e-149 531.2 333 84.7
Lalb_Chr00c24g0406771 Lupinus albus HOM05D003517 ORTHO05D009798 1.1e-148 530.4 333 84.4
Medtr0082s0030 Medicago truncatula HOM05D003517 ORTHO05D009798 1.1e-148 530.4 336 84.2
RcHm_v2.0_MTg0499001 Rosa chinensis HOM05D003517 ORTHO05D009798 7.3e-148 527.7 374 77.0
Nitab4.5_0010559g0050 Nicotiana tabacum HOM05D003517 ORTHO05D009798 4.0e-146 521.9 328 85.1
arahy.Tifrunner.gnm1.ann1.PT41Y0 Arachis hypogaea HOM05D003517 ORTHO05D009798 1.6e-142 510.0 346 80.1
VMungo0985G0017 Vigna mungo HOM05D003517 ORTHO05D009798 3.5e-142 508.8 333 80.2
AT2G07734 Arabidopsis thaliana HOM05D003517 ORTHO05D009798 3.0e-133 479.2 335 78.5
ATMG00290 Arabidopsis thaliana HOM05D003517 ORTHO05D009798 3.0e-133 479.2 335 78.5
A04p09560 Brassica napus HOM05D003517 ORTHO05D009798 6.6e-133 478.0 335 78.5
BolSC28t60322H Brassica oleracea HOM05D003517 ORTHO05D009798 6.6e-133 478.0 335 78.5
BraSC48t46302Z Brassica rapa HOM05D003517 ORTHO05D009798 6.6e-133 478.0 335 78.5
Thhalv10023100m.g Eutrema salsugineum HOM05D003517 ORTHO05D009798 1.1e-132 477.2 335 78.2
Nitab4.5_0003784g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 3.6e-131 472.2 314 80.9
BraSC48t46288Z Brassica rapa HOM05D003517 ORTHO05D009798 5.2e-130 468.4 336 77.4
GSVIVG01006669001 Vitis vinifera HOM05D003517 ORTHO05D009798 1.1e-127 460.7 332 75.6
Nn1g10026 Nelumbo nucifera HOM05D003517 ORTHO05D009798 9.6e-124 447.6 278 83.5
Nn1g10028 Nelumbo nucifera HOM05D003517 ORTHO05D009798 9.6e-124 447.6 278 83.5
DCAR_032455 Daucus carota HOM05D003517 ORTHO05D009798 3.6e-123 445.7 281 84.3
HanXRQChr16g0504301 Helianthus annuus HOM05D003517 ORTHO05D009798 8.4e-120 434.5 311 75.9
HanXRQMTg0579381 Helianthus annuus HOM05D003517 ORTHO05D009798 8.4e-120 434.5 311 75.9
Ca_14831_v3 Cicer arietinum L. HOM05D003517 ORTHO05D009798 4.3e-116 422.2 258 84.9
Peaxi162Scf00456g00032 Petunia axillaris HOM05D003517 ORTHO05D009794 5.3e-114 415.2 256 85.2
CsaV3_UNG208660 Cucumis sativus L. HOM05D003517 ORTHO05D009798 1.5e-113 413.7 278 78.1
SabraMtG0002700 Salix brachista HOM05D000890 ORTHO05D000697 1.5e-113 413.7 337 69.4
Zm00001eb436030 Zea mays HOM05D003517 ORTHO05D009798 4.2e-103 379.0 288 71.5
Hma1.2p1_0020F.1_g014210 Hydrangea macrophylla HOM05D003517 ORTHO05D009798 3.0e-93 346.3 210 85.7
CAN.G85.23 Capsicum annuum HOM05D003517 ORTHO05D009798 9.7e-92 341.3 219 84.9
Lsat_1_v5_gn_7_67721 Lactuca sativa HOM05D003517 ORTHO05D009798 6.3e-91 338.6 257 72.4
MBI05_g23322_MAGBIO Magnolia biondii HOM05D003517 ORTHO05D009798 1.8e-90 337.0 229 78.6
Eucgr.C02512 Eucalyptus grandis HOM05D003517 ORTHO05D009798 2.4e-90 336.7 227 78.4
Sp3g25550 Schrenkiella parvula HOM05D003517 ORTHO05D009798 3.6e-86 322.8 335 60.0
Zm00001eb384400 Zea mays HOM05D003517 ORTHO05D009798 4.6e-86 322.4 232 74.6
Hma1.2p1_0020F.1_g014220 Hydrangea macrophylla HOM05D003517 ORTHO05D009798 7.2e-79 298.5 190 83.7
CAN.G1109.3 Capsicum annuum HOM05D003517 ORTHO05D009798 9.4e-79 298.1 186 85.5
Gorai.001G161800 Gossypium raimondii HOM05D003517 ORTHO05D009798 1.6e-78 297.4 410 50.5
TPR.G20538 Trifolium pratense HOM05D003517 ORTHO05D009798 2.1e-78 297.0 182 85.7
unitig_87.g28026 Utricularia gibba HOM05D003517 ORTHO05D009798 6.1e-78 295.4 195 80.0
Eucgr.H02717 Eucalyptus grandis HOM05D003517 ORTHO05D009798 9.1e-74 281.6 226 69.9
Lalb_Chr22g0353801 Lupinus albus HOM05D003517 ORTHO05D009798 3.6e-70 269.6 175 81.7
BolSC28t60424H Brassica oleracea HOM05D003517 ORTHO05D009798 4.0e-69 266.2 185 77.3
Zm00001eb438100 Zea mays HOM05D003517 ORTHO05D009798 1.1e-66 258.1 182 74.7
Zm00001eb438980 Zea mays HOM05D003517 ORTHO05D009798 1.1e-66 258.1 182 74.7
Zm00001eb439060 Zea mays HOM05D003517 ORTHO05D009798 1.1e-66 258.1 182 74.7
TPR.G36113 Trifolium pratense HOM05D003517 ORTHO05D009798 2.1e-62 243.8 147 85.7
HanXRQChr10g0310901 Helianthus annuus HOM05D003517 ORTHO05D009798 6.8e-61 238.8 176 71.0
EL10Ac7g18051 Beta vulgaris HOM05D003517 ORTHO05D009798 9.1e-58 228.4 197 65.5
Oeu013683.1 Olea europaea HOM05D003517 ORTHO05D009798 3.5e-57 226.5 172 70.3
PGSC0003DMG400033608 Solanum tuberosum HOM05D003517 ORTHO05D009798 4.5e-57 226.1 168 73.8
Nitab4.5_0000172g1110 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.7e-56 224.2 162 75.9
SHI35305 Sapria himalayana HOM05D003517 ORTHO05D009798 4.2e-55 219.5 175 69.7
PSO585G0042 Papaver somniferum HOM05D003517 ORTHO05D009798 5.7e-52 209.1 238 53.4
PSO063G7170 Papaver somniferum HOM05D003517 ORTHO05D009798 9.8e-52 208.4 238 52.9
Nitab4.5_0000172g2130 Nicotiana tabacum HOM05D003517 ORTHO05D009798 2.8e-51 206.8 137 79.6
Nitab4.5_0003945g0030 Nicotiana tabacum HOM05D003517 ORTHO05D009798 2.8e-51 206.8 141 78.0
SEGI_36410 Sequoiadendron giganteum HOM05D003517 ORTHO05D009798 6.3e-51 205.7 262 51.5
Solyc11g030940.3 Solanum lycopersicum HOM05D003517 ORTHO05D009798 1.6e-49 201.1 156 72.4
Nitab4.5_0003945g0070 Nicotiana tabacum HOM05D003517 ORTHO05D009798 3.8e-48 196.4 134 79.1
SGA_v2.0_scaffold648G53338 Striga asiatica HOM05D003517 ORTHO05D009798 3.0e-45 186.8 156 66.0
Zm00001eb438110 Zea mays HOM05D003517 ORTHO05D009798 3.0e-45 186.8 151 68.2
Zm00001eb438970 Zea mays HOM05D003517 ORTHO05D009798 3.0e-45 186.8 151 68.2
Zm00001eb439050 Zea mays HOM05D003517 ORTHO05D009798 3.0e-45 186.8 151 68.2
Zm00001eb440630 Zea mays HOM05D003517 ORTHO05D009798 3.0e-45 186.8 151 68.2
Nitab4.5_0001152g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 2.0e-41 174.1 118 75.4
BraSC48t46337Z Brassica rapa HOM05D003517 ORTHO05D009798 5.0e-40 169.5 140 71.4
Nn1g09918 Nelumbo nucifera HOM05D003517 ORTHO05D009798 1.3e-35 154.8 88 84.1
Nitab4.5_0000172g2160 Nicotiana tabacum HOM05D003517 ORTHO05D009798 3.7e-35 153.3 127 67.7
Nitab4.5_0000172g1090 Nicotiana tabacum HOM05D003517 ORTHO05D009794 1.2e-33 148.3 139 59.7
TPR.G31549 Trifolium pratense HOM05D003517 ORTHO05D009798 1.5e-31 141.4 91 75.8
Solyc10g045740.2 Solanum lycopersicum HOM05D003517 ORTHO05D009798 2.1e-30 137.5 99 70.7
HanXRQChr10g0302361 Helianthus annuus HOM05D003517 ORTHO05D009798 5.4e-26 122.9 110 60.0
Nitab4.5_0001152g0030 Nicotiana tabacum HOM05D003517 ORTHO05D009794 1.2e-25 121.7 108 64.8
Nitab4.5_0001152g0480 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.7e-24 117.9 182 42.9
Nitab4.5_0001152g1080 Nicotiana tabacum HOM05D003517 ORTHO05D009798 8.6e-24 115.5 91 72.5
CARHR287140 Cardamine hirsuta HOM05D003517 ORTHO05D009798 1.1e-23 115.2 79 74.7
Gohir.A13G071500 Gossypium hirsutum HOM05D003517 ORTHO05D009798 3.1e-21 107.1 88 68.2
Nitab4.5_0001127g0280 Nicotiana tabacum HOM05D003517 ORTHO05D009794 1.3e-19 101.7 58 84.5
Nitab4.5_0001152g0970 Nicotiana tabacum HOM05D003517 ORTHO05D025894 1.9e-18 97.8 173 41.0
Solyc11g030935.1 Solanum lycopersicum HOM05D003517 ORTHO05D009798 2.7e-17 94.0 97 57.7
Aqoxy4G01626 Aquilegia oxysepala HOM05D003517 ORTHO05D005131 1.9e-15 87.8 103 54.4
PSO339G1469 Papaver somniferum HOM05D003517 ORTHO05D009798 5.6e-15 86.3 96 52.1
PSO513G0171 Papaver somniferum HOM05D003517 ORTHO05D009798 2.1e-14 84.3 65 63.1
Nitab4.5_0008059g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.1e-13 82.0 62 75.8
Nitab4.5_0000351g0300 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.2e-12 78.6 42 88.1
Lalb_Chr22g0353791 Lupinus albus HOM05D003517 ORTHO05D009798 4.4e-12 76.6 57 68.4
Dinv18903 Davidia involucrata HOM05D003517 ORTHO05D009798 5.8e-12 76.3 50 82.0
BraSC159t45733Z Brassica rapa HOM05D003517 ORTHO05D009798 1.9e-10 71.2 68 64.7
Medtr0030s0090 Medicago truncatula HOM05D003517 ORTHO05D009798 1.2e-09 68.6 36 88.9
Lj2g0009144 Lotus japonicus HOM05D000751 ORTHO05D000889 9.6e-07 58.9 37 75.7


User provided reference genes

Program Settings