Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold40G15679 Striga asiatica HOM05D007048 ORTHO05D008811 2.6e-81 305.4 167 100.0
Migut.D01184 Erythranthe guttata HOM05D007048 ORTHO05D008811 9.0e-50 200.7 166 68.7
SalBow1G8421 Salvia bowleyana HOM05D007048 ORTHO05D008811 3.2e-47 192.2 166 65.7
Actinidia18303 Actinidia chinensis HOM05D007048 ORTHO05D008811 3.3e-44 182.2 165 61.8
Dinv23221 Davidia involucrata HOM05D007048 ORTHO05D008811 1.4e-42 176.8 164 64.0
Haze_07101 Corylus avellana HOM05D007048 ORTHO05D008811 3.1e-42 175.6 164 59.8
Hma1.2p1_0664F.1_g199000 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 3.4e-41 172.2 146 63.7
Nitab4.5_0002584g0070 Nicotiana tabacum HOM05D007048 ORTHO05D008811 7.6e-41 171.0 173 59.5
Manes.14G045100 Manihot esculenta HOM05D007048 ORTHO05D008811 1.3e-40 170.2 164 59.1
Cfa018710 Carpinus fangiana HOM05D007048 ORTHO05D008811 2.9e-40 169.1 148 61.5
Cc04_g05890 Coffea canephora HOM05D007048 ORTHO05D008811 3.8e-40 168.7 164 58.5
Nitab4.5_0003119g0030 Nicotiana tabacum HOM05D007048 ORTHO05D008811 1.1e-39 167.2 173 57.8
Sopen07g028330 Solanum pennellii HOM05D007048 ORTHO05D008820 1.1e-39 167.2 166 59.0
Peaxi162Scf01168g00014 Petunia axillaris HOM05D007048 ORTHO05D008811 1.4e-39 166.8 148 62.8
Prupe.5G142300 Prunus persica HOM05D007048 ORTHO05D008811 1.9e-39 166.4 148 60.1
Rhsim08G0196900 Rhododendron simsii HOM05D007048 ORTHO05D008811 7.2e-39 164.5 157 59.2
CAN.G521.6 Capsicum annuum HOM05D007048 ORTHO05D008811 9.3e-39 164.1 166 57.8
Solyc07g054400.3 Solanum lycopersicum HOM05D007048 ORTHO05D008811 1.2e-38 163.7 166 58.4
MD06G1131300 Malus domestica HOM05D007048 ORTHO05D008811 2.7e-38 162.5 148 59.5
PGSC0003DMG400018389 Solanum tuberosum HOM05D007048 ORTHO05D008811 3.6e-38 162.2 166 57.2
Cpa.g.sc13.165 Carica papaya HOM05D007048 ORTHO05D008811 6.1e-38 161.4 159 57.2
QL10p000556 Quercus lobata HOM05D007048 ORTHO05D008811 6.1e-38 161.4 165 58.8
RcHm_v2.0_Chr7g0188741 Rosa chinensis HOM05D007048 ORTHO05D008811 1.8e-37 159.8 148 56.1
Ciclev10033023m.g Citrus clementina HOM05D007048 ORTHO05D008811 2.3e-37 159.5 163 56.4
TAR475G0007 Trochodendron aralioides HOM05D007048 ORTHO05D008811 2.3e-37 159.5 161 57.8
TAR629G1913 Trochodendron aralioides HOM05D007048 ORTHO05D008811 2.3e-37 159.5 161 57.8
Thecc.03G140000 Theobroma cacao HOM05D007048 ORTHO05D008811 3.9e-37 158.7 164 55.5
CiPaw.11G000300 Carya illinoinensis HOM05D007048 ORTHO05D008811 8.8e-37 157.5 164 56.1
Duzib068G0404 Durio zibethinus HOM05D007048 ORTHO05D008811 1.1e-36 157.1 160 58.8
GSVIVG01008645001 Vitis vinifera HOM05D007048 ORTHO05D008811 1.1e-36 157.1 165 56.4
TWI39G0039 Tripterygium wilfordii HOM05D007048 ORTHO05D008811 1.5e-36 156.8 164 56.1
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 4.3e-36 155.2 148 55.4
Sabra15G0126100 Salix brachista HOM05D007048 ORTHO05D008811 7.4e-36 154.5 164 52.4
Sc22g0003410 Simmondsia chinensis HOM05D007048 ORTHO05D008811 7.4e-36 154.5 146 58.9
Aqoxy3G01543 Aquilegia oxysepala HOM05D007048 ORTHO05D008811 1.7e-35 153.3 145 57.2
Atru.chr6.1912 Acer truncatum HOM05D007048 ORTHO05D008811 2.8e-35 152.5 163 54.0
EL10Ac5g11295 Beta vulgaris HOM05D007048 ORTHO05D008811 2.8e-35 152.5 146 58.9
CANSAT56G3502 Cannabis sativa HOM05D007048 ORTHO05D008811 6.3e-35 151.4 151 58.9
CANSAT56G3230 Cannabis sativa HOM05D007048 ORTHO05D008811 8.2e-35 151.0 151 58.9
vmacro19180 Vaccinium macrocarpon HOM05D007048 ORTHO05D008811 1.1e-34 150.6 158 59.5
FAN18G3224 Fragaria x ananassa HOM05D007048 ORTHO05D008811 1.4e-34 150.2 148 55.4
Gohir.D07G051200 Gossypium hirsutum HOM05D007048 ORTHO05D008811 1.8e-34 149.8 164 52.4
Gorai.001G054300 Gossypium raimondii HOM05D007048 ORTHO05D008811 1.8e-34 149.8 164 52.4
MELO3C035737.2 Cucumis melo HOM05D007048 ORTHO05D008811 3.1e-34 149.1 160 53.8
PSO339G2722 Papaver somniferum HOM05D007048 ORTHO05D008811 3.1e-34 149.1 163 52.8
CsaV3_1G009910 Cucumis sativus L. HOM05D007048 ORTHO05D008811 4.1e-34 148.7 148 55.4
Gohir.A07G046900 Gossypium hirsutum HOM05D007048 ORTHO05D008811 4.1e-34 148.7 164 51.8
Potri.015G105900 Populus trichocarpa HOM05D007048 ORTHO05D008811 5.3e-34 148.3 160 52.5
TWI14G0368 Tripterygium wilfordii HOM05D007048 ORTHO05D008811 5.3e-34 148.3 164 52.4
FAN04G3007 Fragaria x ananassa HOM05D007048 ORTHO05D008811 9.1e-34 147.5 149 54.4
ECA246G0638 Erigeron canadensis HOM05D003971 ORTHO05D004762 2.0e-33 146.4 164 51.8
PSO384G0987 Papaver somniferum HOM05D007048 ORTHO05D008811 3.4e-33 145.6 163 52.8
ClCG03G004020 Citrullus lanatus HOM05D007048 ORTHO05D008811 4.5e-33 145.2 157 54.1
Lsat_1_v5_gn_5_10141 Lactuca sativa HOM05D007048 ORTHO05D008811 7.7e-33 144.4 160 51.9
Hund10045 Selenicereus undatus HOM05D007048 ORTHO05D008811 7.7e-33 144.4 165 52.1
HanXRQChr10g0316061 Helianthus annuus HOM05D007048 ORTHO05D008811 1.7e-32 143.3 162 51.2
unitig_747.g21321 Utricularia gibba HOM05D007048 ORTHO05D008811 2.9e-32 142.5 197 45.7
Glyma.04G201000 Glycine max HOM05D007048 ORTHO05D008811 6.5e-32 141.4 147 52.4
Phvul.009G161500 Phaseolus vulgaris HOM05D007048 ORTHO05D008811 8.5e-32 141.0 147 53.1
AT5G50930 Arabidopsis thaliana HOM05D007048 ORTHO05D008811 1.4e-31 140.2 149 53.0
Ah.02g114610 Amaranthus hybridus HOM05D007048 ORTHO05D008811 1.9e-31 139.8 164 51.2
arahy.Tifrunner.gnm1.ann1.QNIR3T Arachis hypogaea HOM05D007048 ORTHO05D008811 2.5e-31 139.4 157 51.0
AL8G25120 Arabidopsis lyrata HOM05D007048 ORTHO05D008811 3.2e-31 139.0 149 52.3
Thhalv10014960m.g Eutrema salsugineum HOM05D007048 ORTHO05D008811 5.5e-31 138.3 140 55.7
Carub.0008s1094 Capsella rubella HOM05D007048 ORTHO05D008811 7.2e-31 137.9 149 53.7
Eucgr.K02194 Eucalyptus grandis HOM05D007048 ORTHO05D008811 7.2e-31 137.9 158 47.5
PGR031G3072 Punica granatum HOM05D007048 ORTHO05D008811 1.2e-30 137.1 149 51.7
Aa31LG3G7430 Aethionema arabicum HOM05D007048 ORTHO05D008811 1.6e-30 136.7 159 49.7
PGR031G2395 Punica granatum HOM05D007048 ORTHO05D008811 2.1e-30 136.3 149 51.7
PGR031G3844 Punica granatum HOM05D007048 ORTHO05D008811 4.7e-30 135.2 149 51.7
A03p16450 Brassica napus HOM05D007048 ORTHO05D008811 6.1e-30 134.8 157 51.0
MBI07_g41901_MAGBIO Magnolia biondii HOM05D007048 ORTHO05D008811 6.1e-30 134.8 163 48.5
Glyma.06G164400 Glycine max HOM05D007048 ORTHO05D008811 7.9e-30 134.4 147 51.0
Sp6g13100 Schrenkiella parvula HOM05D007048 ORTHO05D008811 7.9e-30 134.4 140 53.6
Sed0017197 Sechium edule HOM05D007048 ORTHO05D008811 7.9e-30 134.4 160 50.6
BraA03t10934Z Brassica rapa HOM05D007048 ORTHO05D008811 1.0e-29 134.0 155 51.0
VMungo1309G1627 Vigna mungo HOM05D007048 ORTHO05D008811 2.3e-29 132.9 135 53.3
BcaNung07188 Brassica carinata HOM05D007048 ORTHO05D008811 3.0e-29 132.5 155 50.3
C03p19340 Brassica napus HOM05D007048 ORTHO05D008811 3.0e-29 132.5 155 50.3
BolC3t14320H Brassica oleracea HOM05D007048 ORTHO05D008811 3.0e-29 132.5 155 50.3
Lj1g0016164 Lotus japonicus HOM05D007048 ORTHO05D008811 3.0e-29 132.5 149 49.7
arahy.Tifrunner.gnm1.ann1.8FCI62 Arachis hypogaea HOM05D007048 ORTHO05D008811 8.8e-29 131.0 158 50.6
Medtr3g098660 Medicago truncatula HOM05D007048 ORTHO05D008811 8.8e-29 131.0 135 53.3
Psat5g055240 Pisum sativum HOM05D007048 ORTHO05D008811 1.1e-28 130.6 131 55.0
Hma1.2p1_0664F.1_g198980 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 3.3e-28 129.0 83 80.7
Os04g0397700 Oryza sativa ssp. japonica HOM05D007048 ORTHO05D008811 3.3e-28 129.0 153 47.7
CARHR257290 Cardamine hirsuta HOM05D007048 ORTHO05D008811 4.4e-28 128.6 154 48.7
Hma1.2p1_0664F.1_g198990 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 4.4e-28 128.6 70 90.0
MD14G1147700 Malus domestica HOM05D007048 ORTHO05D008811 4.4e-28 128.6 122 56.6
Lalb_Chr08g0237541 Lupinus albus HOM05D007048 ORTHO05D008811 2.2e-27 126.3 155 48.4
TPR.G21584 Trifolium pratense HOM05D007048 ORTHO05D008811 2.2e-27 126.3 135 52.6
arahy.Tifrunner.gnm1.ann1.CS080T Arachis hypogaea HOM05D007048 ORTHO05D008811 8.2e-27 124.4 155 47.7
CSS0012628 Camellia sinensis var. sinensis HOM05D007048 ORTHO05D008811 3.1e-26 122.5 166 48.8
arahy.Tifrunner.gnm1.ann1.DD5QTF Arachis hypogaea HOM05D007048 ORTHO05D008811 1.5e-25 120.2 155 45.8
FvH4_5g09450 Fragaria vesca HOM05D007048 ORTHO05D008811 2.2e-24 116.3 122 51.6
Nn3g16280 Nelumbo nucifera HOM05D007048 ORTHO05D008811 3.8e-24 115.5 70 80.0
AUR62009534 Chenopodium quinoa HOM05D007048 ORTHO05D008811 2.1e-22 109.8 122 52.5
AUR62044083 Chenopodium quinoa HOM05D007048 ORTHO05D008811 1.0e-21 107.5 122 51.6
PGR044G0448 Punica granatum HOM05D007048 ORTHO05D008811 2.3e-21 106.3 156 43.6
AUR62041697 Chenopodium quinoa HOM05D007048 ORTHO05D008811 3.0e-21 105.9 122 50.8
CDE05G0753 Ceratophyllum demersum HOM05D000512 ORTHO05D000861 6.7e-21 104.8 89 60.7
HPP92_008245 Vanilla planifolia HOM05D007048 ORTHO05D008811 8.8e-21 104.4 147 43.5
SEGI_10153 Sequoiadendron giganteum HOM05D007048 ORTHO05D008811 9.7e-20 100.9 140 43.6
Zm00001eb084850 Zea mays HOM05D007048 ORTHO05D008811 9.7e-20 100.9 77 63.6
ATR0582G167 Amborella trichopoda HOM05D007048 ORTHO05D008811 4.1e-18 95.5 135 42.2
BcaB01g01606 Brassica carinata HOM05D007048 ORTHO05D008811 2.0e-17 93.2 114 48.2
FAN13G1437 Fragaria x ananassa HOM05D007048 ORTHO05D008811 5.0e-16 88.6 103 47.6
Nn1g04900 Nelumbo nucifera HOM05D007048 ORTHO05D008811 6.5e-16 88.2 112 46.4
AagrBONN_evm.TU.Sc2ySwM_362.2725 Anthoceros agrestis HOM05D007048 ORTHO05D008811 2.3e-13 79.7 148 35.8
Oeu009260.1 Olea europaea HOM05D007048 ORTHO05D008811 1.7e-11 73.6 41 87.8
BcaB05g23641 Brassica carinata HOM05D007048 ORTHO05D008811 4.8e-11 72.0 105 45.7
Pp3c2_1780 Physcomitrium patens HOM05D007048 ORTHO05D008811 6.3e-11 71.6 127 37.0
Mapoly0109s0028 Marchantia polymorpha HOM05D007048 ORTHO05D008811 2.4e-10 69.7 130 34.6
COL.COLO4_37252 Corchorus olitorius HOM05D007048 ORTHO05D008811 1.6e-09 67.0 93 48.4
ECA233G3375 Erigeron canadensis HOM05D007048 ORTHO05D008811 3.5e-09 65.9 69 52.2
RcHm_v2.0_Chr5g0067941 Rosa chinensis HOM05D052544 ORTHO05D008811 1.9e-07 60.1 48 62.5


User provided reference genes

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