Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold400G50840 Striga asiatica HOM05D007194 ORTHO05D009182 5.5e-270 933.7 469 100.0
CAN.G1690.2 Capsicum annuum HOM05D007194 ORTHO05D009182 7.5e-118 428.3 240 92.1
AT2G07771 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 3.7e-117 426.0 252 88.9
ATMG00900 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 3.7e-117 426.0 252 88.9
CARHR283160 Cardamine hirsuta HOM05D007194 ORTHO05D009182 2.4e-116 423.3 252 88.1
CANSAT16G0047 Cannabis sativa HOM05D007194 ORTHO05D009182 1.2e-115 421.0 239 91.2
DCAR_032453 Daucus carota HOM05D007194 ORTHO05D009182 2.0e-115 420.2 239 91.6
Lsat_1_v5_gn_7_100841 Lactuca sativa HOM05D007194 ORTHO05D009182 4.5e-115 419.1 243 88.9
Lsat_1_v5_gn_7_99901 Lactuca sativa HOM05D007194 ORTHO05D009182 4.5e-115 419.1 243 88.9
Cfa021340 Carpinus fangiana HOM05D007194 ORTHO05D009182 2.2e-114 416.8 256 86.7
RcHm_v2.0_MTg0498961 Rosa chinensis HOM05D007194 ORTHO05D009182 2.9e-114 416.4 239 90.4
HanXRQChr16g0504451 Helianthus annuus HOM05D007194 ORTHO05D009182 5.0e-114 415.6 239 89.5
HanXRQMTg0579111 Helianthus annuus HOM05D007194 ORTHO05D009182 5.0e-114 415.6 239 89.5
Solyc00g500242.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 6.5e-114 415.2 240 90.0
Solyc00g500277.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 6.5e-114 415.2 240 90.0
Aa31csc239G110 Aethionema arabicum HOM05D007194 ORTHO05D009182 1.9e-113 413.7 252 86.9
LjContig00315g0023372 Lotus japonicus HOM05D007194 ORTHO05D009182 2.5e-113 413.3 239 90.4
arahy.Tifrunner.gnm1.ann1.14Z8E4 Arachis hypogaea HOM05D007194 ORTHO05D009182 1.2e-112 411.0 239 90.0
arahy.Tifrunner.gnm1.ann1.F9VS0T Arachis hypogaea HOM05D007194 ORTHO05D009182 1.2e-112 411.0 239 90.0
arahy.Tifrunner.gnm1.ann1.SBV1ZL Arachis hypogaea HOM05D007194 ORTHO05D009182 1.2e-112 411.0 239 90.0
Sp3g25540 Schrenkiella parvula HOM05D007194 ORTHO05D009182 1.2e-112 411.0 239 89.5
A04p09540 Brassica napus HOM05D007194 ORTHO05D009182 4.7e-112 409.1 239 89.1
BolSC28t60320H Brassica oleracea HOM05D007194 ORTHO05D009182 4.7e-112 409.1 239 89.1
BraSC48t46300Z Brassica rapa HOM05D007194 ORTHO05D009182 4.7e-112 409.1 239 89.1
Gorai.001G165900 Gossypium raimondii HOM05D007194 ORTHO05D009182 6.1e-112 408.7 253 85.8
AL3G44600 Arabidopsis lyrata HOM05D007194 ORTHO05D009182 8.0e-112 408.3 241 88.4
CAN.G85.20 Capsicum annuum HOM05D007194 ORTHO05D009182 1.2e-110 404.4 240 88.3
Lalb_Chr00c24g0406951 Lupinus albus HOM05D007194 ORTHO05D009182 1.5e-110 404.1 239 88.3
Sed0021793 Sechium edule HOM05D007194 ORTHO05D009182 1.3e-109 401.0 232 90.1
Lalb_Chr17g0337381 Lupinus albus HOM05D007194 ORTHO05D009182 2.2e-109 400.2 239 87.0
Nitab4.5_0000031g0190 Nicotiana tabacum HOM05D007194 ORTHO05D009182 2.8e-109 399.8 229 88.6
Psat0s922g0240 Pisum sativum HOM05D007194 ORTHO05D009182 7.7e-107 391.7 228 89.9
Aqoxy3G01137 Aquilegia oxysepala HOM05D007194 ORTHO05D009182 2.9e-106 389.8 228 89.5
EL10Ac7g17455 Beta vulgaris HOM05D007194 ORTHO05D009182 8.6e-106 388.3 236 86.0
SHI36846 Sapria himalayana HOM05D007194 ORTHO05D009182 1.1e-105 387.9 239 85.4
RhsimMtG0003100 Rhododendron simsii HOM05D007194 ORTHO05D009182 4.7e-104 382.5 231 85.7
RhsimMtG0007900 Rhododendron simsii HOM05D007194 ORTHO05D009182 4.7e-104 382.5 231 85.7
Lj2P1233T109 Lonicera japonica HOM05D007194 ORTHO05D009182 1.0e-103 381.3 244 82.0
Dinv06723 Davidia involucrata HOM05D007194 ORTHO05D009182 1.4e-100 370.9 208 91.3
Nn1g09980 Nelumbo nucifera HOM05D007194 ORTHO05D009182 1.7e-98 364.0 208 89.9
arahy.Tifrunner.gnm1.ann1.GM5VKV Arachis hypogaea HOM05D007194 ORTHO05D009182 6.6e-98 362.1 228 84.6
Lsat_1_v5_gn_1_67041 Lactuca sativa HOM05D007194 ORTHO05D009182 8.0e-96 355.1 207 87.0
BolSC28t60390H Brassica oleracea HOM05D007194 ORTHO05D009182 1.4e-95 354.4 208 88.9
SHI36965 Sapria himalayana HOM05D007194 ORTHO05D009182 7.5e-94 348.6 209 85.6
AT2G07681 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 9.8e-94 348.2 231 81.4
Lj5P380T4 Lonicera japonica HOM05D007194 ORTHO05D009182 7.0e-92 342.0 230 79.6
TPR.G39619 Trifolium pratense HOM05D007194 ORTHO05D009182 3.5e-91 339.7 197 88.8
BraSC48t46335Z Brassica rapa HOM05D007194 ORTHO05D009182 1.3e-90 337.8 197 88.8
Lsat_1_v5_gn_6_37840 Lactuca sativa HOM05D007194 ORTHO05D009182 2.3e-90 337.0 206 83.5
Lsat_1_v5_gn_4_20401 Lactuca sativa HOM05D007194 ORTHO05D009182 3.3e-89 333.2 201 84.1
Ah.10g028440 Amaranthus hybridus HOM05D007194 ORTHO05D009182 1.4e-87 327.8 197 86.8
Nitab4.5_0001152g0940 Nicotiana tabacum HOM05D007194 ORTHO05D009182 3.1e-87 326.6 215 80.0
SalBow1G0339 Salvia bowleyana HOM05D007194 ORTHO05D009182 1.5e-86 324.3 199 85.9
Sopen00g002730 Solanum pennellii HOM05D007194 ORTHO05D009182 2.2e-85 320.5 178 89.3
Prupe.1G175300 Prunus persica HOM05D007194 ORTHO05D009182 4.9e-85 319.3 208 81.2
BolSC28t60422H Brassica oleracea HOM05D007194 ORTHO05D009182 8.3e-85 318.5 197 86.3
Nitab4.5_0002418g0160 Nicotiana tabacum HOM05D007194 ORTHO05D009182 2.1e-83 313.9 209 78.9
Eucgr.I01863 Eucalyptus grandis HOM05D007194 ORTHO05D009182 8.1e-80 302.0 239 71.1
TWI15G0311 Tripterygium wilfordii HOM05D007194 ORTHO05D009182 8.1e-80 302.0 180 85.6
Nitab4.5_0012158g0050 Nicotiana tabacum HOM05D007194 ORTHO05D009182 1.8e-79 300.8 210 78.1
Lsat_1_v5_gn_5_17681 Lactuca sativa HOM05D007194 ORTHO05D009182 2.0e-78 297.4 189 83.6
Sed0000988 Sechium edule HOM05D007194 ORTHO05D009182 6.4e-77 292.4 170 88.2
Nitab4.5_0006806g0100 Nicotiana tabacum HOM05D007194 ORTHO05D009182 3.2e-76 290.0 209 76.1
Lj2P1235T102 Lonicera japonica HOM05D007194 ORTHO05D009182 1.0e-74 285.0 200 76.0
ECA039G0021 Erigeron canadensis HOM05D007194 ORTHO05D009182 2.8e-64 250.4 144 87.5
HanXRQChr05g0135281 Helianthus annuus HOM05D007194 ORTHO05D009182 2.9e-61 240.4 129 93.8
Ca_07440_v3 Cicer arietinum L. HOM05D007194 ORTHO05D009182 8.4e-61 238.8 133 91.0
arahy.Tifrunner.gnm1.ann1.UX1VFS Arachis hypogaea HOM05D007194 ORTHO05D009182 2.7e-59 233.8 227 60.8
TAR625G1253 Trochodendron aralioides HOM05D007194 ORTHO05D009182 6.2e-56 222.6 124 91.1
EL10Ac8g19071 Beta vulgaris HOM05D007194 ORTHO05D009182 4.5e-54 216.5 141 80.1
Nitab4.5_0001646g0030 Nicotiana tabacum HOM05D007194 ORTHO05D009182 2.7e-51 207.2 126 84.1
QL93p0053_0961 Quercus lobata HOM05D007194 ORTHO05D009182 6.2e-48 196.1 188 60.6
unitig_87.g27964 Utricularia gibba HOM05D007194 ORTHO05D009182 3.2e-44 183.7 105 89.5
CAN.G889.9 Capsicum annuum HOM05D007194 ORTHO05D009182 4.2e-44 183.3 107 87.9
Lj1P486T6 Lonicera japonica HOM05D007194 ORTHO05D009182 1.6e-43 181.4 113 83.2
CAN.G1542.2 Capsicum annuum HOM05D007194 ORTHO05D009182 6.0e-43 179.5 118 78.0
arahy.Tifrunner.gnm1.ann1.6A3TYM Arachis hypogaea HOM05D007194 ORTHO05D009182 5.7e-41 172.9 106 84.9
Nitab4.5_0003083g0040 Nicotiana tabacum HOM05D007194 ORTHO05D008899 2.1e-40 171.0 105 83.8
BraSC48t46286Z Brassica rapa HOM05D007194 ORTHO05D009182 1.4e-39 168.3 99 89.9
Ca_14744_v3 Cicer arietinum L. HOM05D007194 ORTHO05D009182 2.0e-38 164.5 88 92.0
ATR0693G113 Amborella trichopoda HOM05D007194 ORTHO05D009182 2.9e-37 160.6 98 82.7
ClCG10G007880 Citrullus lanatus HOM05D007194 ORTHO05D009182 6.1e-35 152.9 96 85.4
CAN.G1001.43 Capsicum annuum HOM05D000927 ORTHO05D000850 1.3e-32 145.2 77 89.6
SHI26663 Sapria himalayana HOM05D007194 ORTHO05D009182 1.3e-32 145.2 101 78.2
CAN.G1134.4 Capsicum annuum HOM05D007194 ORTHO05D009182 2.8e-32 144.1 111 70.3
CAN.G122.10 Capsicum annuum HOM05D007194 ORTHO05D009182 2.4e-31 141.0 75 90.7
Glyma.19G075000 Glycine max HOM05D007194 ORTHO05D009182 2.6e-30 137.5 73 91.8
Haze_27474 Corylus avellana HOM05D007194 ORTHO05D009182 4.5e-30 136.7 214 38.3
CAN.G78.2 Capsicum annuum HOM05D007194 ORTHO05D009182 1.3e-29 135.2 70 92.9
Sopen01g007230 Solanum pennellii HOM05D007194 ORTHO05D009182 1.1e-28 132.1 69 91.3
Gohir.A08G085962 Gossypium hirsutum HOM05D007194 ORTHO05D009182 1.6e-27 128.3 178 50.0
Gohir.A02G088502 Gossypium hirsutum HOM05D007194 ORTHO05D009182 1.0e-26 125.6 69 87.0
Nitab4.5_0000859g0090 Nicotiana tabacum HOM05D007194 ORTHO05D009182 5.7e-25 119.8 90 74.4
EL10Ac5g12442 Beta vulgaris HOM05D004537 ORTHO05D005492 7.4e-25 119.4 79 77.2
Peaxi162Scf00174g01622 Petunia axillaris HOM05D000219 ORTHO05D000226 4.8e-24 116.7 60 95.0
Solyc12g035840.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 1.5e-22 111.7 67 83.6
Manes.06G014501 Manihot esculenta HOM05D007194 ORTHO05D009182 3.4e-22 110.5 65 83.1
BraSC54t46378Z Brassica rapa HOM05D007194 ORTHO05D009182 1.6e-19 101.7 62 87.1
CAN.G380.6 Capsicum annuum HOM05D007194 ORTHO05D009182 3.7e-16 90.5 55 81.8
SHI21961 Sapria himalayana HOM05D007194 ORTHO05D009182 5.3e-15 86.7 54 85.2
SHI24634 Sapria himalayana HOM05D007194 ORTHO05D009182 1.2e-14 85.5 127 44.9
Nitab4.5_0000859g0080 Nicotiana tabacum HOM05D000540 ORTHO05D008899 7.2e-12 76.3 50 78.0
SHI49604 Sapria himalayana HOM05D007194 ORTHO05D009182 3.6e-11 73.9 37 97.3
Dinv00475 Davidia involucrata HOM05D007194 ORTHO05D009182 1.1e-09 68.9 35 94.3
Phvul.007G104600 Phaseolus vulgaris HOM05D007194 ORTHO05D009182 1.4e-07 62.0 46 73.9
PGSC0003DMG400042571 Solanum tuberosum HOM05D007194 ORTHO05D009182 3.1e-07 60.8 44 75.0


User provided reference genes

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