Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold3G01735 Striga asiatica HOM05D001674 ORTHO05D008599 0.0e+00 3113.9 1642 100.0
Migut.D01672 Erythranthe guttata HOM05D001674 ORTHO05D008599 0.0e+00 1819.7 1689 64.1
MSTRG.9602 Avicennia marina HOM05D001674 ORTHO05D008599 0.0e+00 1677.1 1714 60.2
SalBow7G3498 Salvia bowleyana HOM05D001674 ORTHO05D008599 0.0e+00 1620.1 1730 58.8
Oeu032213.1 Olea europaea HOM05D001674 ORTHO05D008599 0.0e+00 1473.4 1733 54.2
vmacro17586 Vaccinium macrocarpon HOM05D001674 ORTHO05D008599 0.0e+00 1371.3 1708 52.5
Cc00_g02250 Coffea canephora HOM05D001674 ORTHO05D008599 0.0e+00 1322.8 1775 50.0
GSVIVG01007917001 Vitis vinifera HOM05D001674 ORTHO05D008599 0.0e+00 1310.8 1667 51.6
QL10p018629 Quercus lobata HOM05D001674 ORTHO05D008599 0.0e+00 1305.4 1740 50.5
TAR629G0913 Trochodendron aralioides HOM05D001674 ORTHO05D008599 0.0e+00 1293.5 1781 48.9
Nitab4.5_0004511g0020 Nicotiana tabacum HOM05D001674 ORTHO05D008599 0.0e+00 1289.2 1676 51.4
Rhsim08G0149500 Rhododendron simsii HOM05D001674 ORTHO05D008599 0.0e+00 1280.8 1469 54.5
Nn4g23353 Nelumbo nucifera HOM05D001674 ORTHO05D008599 0.0e+00 1273.5 1783 49.0
CAN.G479.33 Capsicum annuum HOM05D001674 ORTHO05D008599 0.0e+00 1266.1 1681 50.0
Ciclev10018469m.g Citrus clementina HOM05D001674 ORTHO05D008599 0.0e+00 1258.4 1747 48.8
Thecc.03G096700 Theobroma cacao HOM05D001674 ORTHO05D008599 0.0e+00 1257.7 1749 49.1
Hma1.2p1_0060F.1_g033350 Hydrangea macrophylla HOM05D001674 ORTHO05D008599 0.0e+00 1255.0 1702 50.2
Sopen03g034510 Solanum pennellii HOM05D001674 ORTHO05D008599 0.0e+00 1255.0 1688 49.7
PGR083G0537 Punica granatum HOM05D001674 ORTHO05D008599 0.0e+00 1244.6 1738 47.9
DCAR_031671 Daucus carota HOM05D001674 ORTHO05D008599 0.0e+00 1242.6 1741 49.8
COL.COLO4_36885 Corchorus olitorius HOM05D001674 ORTHO05D008599 0.0e+00 1236.1 1738 49.1
Duzib068G0733 Durio zibethinus HOM05D001674 ORTHO05D008599 0.0e+00 1232.6 1751 48.4
Gorai.007G039000 Gossypium raimondii HOM05D001674 ORTHO05D008599 0.0e+00 1228.4 1750 48.5
Atru.chr9.280 Acer truncatum HOM05D001674 ORTHO05D008599 0.0e+00 1221.1 1769 48.4
Haze_07676 Corylus avellana HOM05D001674 ORTHO05D008599 0.0e+00 1219.1 1520 51.8
Manes.06G087600 Manihot esculenta HOM05D001674 ORTHO05D008599 0.0e+00 1216.1 1824 46.6
HanXRQChr04g0107361 Helianthus annuus HOM05D001674 ORTHO05D008599 0.0e+00 1210.7 1651 49.1
Actinidia04849 Actinidia chinensis HOM05D001674 ORTHO05D008599 0.0e+00 1201.8 1401 55.1
Gohir.A11G032900 Gossypium hirsutum HOM05D001674 ORTHO05D008599 0.0e+00 1196.4 1755 48.0
Lalb_Chr13g0302981 Lupinus albus HOM05D001674 ORTHO05D008599 0.0e+00 1192.2 1743 46.7
ECA247G0462 Erigeron canadensis HOM05D001674 ORTHO05D008599 0.0e+00 1191.0 1652 48.7
Sed0027646 Sechium edule HOM05D001674 ORTHO05D008599 0.0e+00 1188.7 1745 47.3
Aqoxy3G00452 Aquilegia oxysepala HOM05D001674 ORTHO05D008599 0.0e+00 1187.6 1743 47.8
PGSC0003DMG400024553 Solanum tuberosum HOM05D001674 ORTHO05D008599 0.0e+00 1185.2 1437 53.0
Glyma.17G076400 Glycine max HOM05D001674 ORTHO05D008599 0.0e+00 1182.5 1752 46.1
VMungo1215G3312 Vigna mungo HOM05D001674 ORTHO05D008599 0.0e+00 1177.2 1738 46.4
Glyma.05G023300 Glycine max HOM05D001674 ORTHO05D008599 0.0e+00 1176.0 1745 46.5
MELO3C017205.2 Cucumis melo HOM05D001674 ORTHO05D008599 0.0e+00 1174.8 1746 46.3
Potri.012G066900 Populus trichocarpa HOM05D001674 ORTHO05D008599 0.0e+00 1172.1 1568 49.4
Sabra12G0048200 Salix brachista HOM05D001674 ORTHO05D008599 0.0e+00 1170.6 1917 44.3
CsaV3_1G002700 Cucumis sativus L. HOM05D001674 ORTHO05D008599 0.0e+00 1169.8 1743 46.6
Prupe.5G200400 Prunus persica HOM05D001674 ORTHO05D008599 0.0e+00 1169.1 1733 47.0
CANSAT80G0851 Cannabis sativa HOM05D001674 ORTHO05D008599 0.0e+00 1167.5 1728 46.6
Phvul.003G186700 Phaseolus vulgaris HOM05D001674 ORTHO05D008599 0.0e+00 1162.9 1737 46.5
arahy.Tifrunner.gnm1.ann1.MMN4BF Arachis hypogaea HOM05D001674 ORTHO05D008599 0.0e+00 1157.5 1769 45.8
TWI15G1152 Tripterygium wilfordii HOM05D001674 ORTHO05D008599 0.0e+00 1156.0 1709 46.4
Lsat_1_v5_gn_1_13760 Lactuca sativa HOM05D001674 ORTHO05D008599 0.0e+00 1154.0 1644 48.6
TPR.G2046 Trifolium pratense HOM05D001674 ORTHO05D008599 0.0e+00 1151.0 1711 46.3
ClCG06G015860 Citrullus lanatus HOM05D001674 ORTHO05D008599 0.0e+00 1148.7 1763 45.2
Psat4g048680 Pisum sativum HOM05D001674 ORTHO05D008599 0.0e+00 1146.0 1712 46.3
Lj4g0011824 Lotus japonicus HOM05D001674 ORTHO05D008599 0.0e+00 1141.3 1758 45.8
Hund02613 Selenicereus undatus HOM05D001674 ORTHO05D008599 0.0e+00 1132.1 1735 46.3
Medtr4g109230 Medicago truncatula HOM05D001674 ORTHO05D008599 0.0e+00 1125.5 1709 46.0
FvH4_5g14340 Fragaria vesca HOM05D001674 ORTHO05D008599 0.0e+00 1121.3 1716 45.3
FAN18G2329 Fragaria x ananassa HOM05D001674 ORTHO05D008599 0.0e+00 1120.1 1716 45.3
AUR62021608 Chenopodium quinoa HOM05D001674 ORTHO05D008599 0.0e+00 1119.8 1764 45.6
FAN13G3105 Fragaria x ananassa HOM05D001674 ORTHO05D008599 0.0e+00 1117.1 1716 45.2
Ca_21793_v3 Cicer arietinum L. HOM05D001674 ORTHO05D008599 0.0e+00 1114.4 1711 45.5
FAN08G0876 Fragaria x ananassa HOM05D001674 ORTHO05D008599 0.0e+00 1111.7 1726 44.8
RcHm_v2.0_Chr7g0182421 Rosa chinensis HOM05D001674 ORTHO05D008599 0.0e+00 1095.9 1718 44.4
AUR62008489 Chenopodium quinoa HOM05D001674 ORTHO05D008599 0.0e+00 1080.1 1806 44.4
Eucgr.B00566 Eucalyptus grandis HOM05D001674 ORTHO05D008599 2.2e-311 1073.2 1430 49.9
PSO478G4640 Papaver somniferum HOM05D001674 ORTHO05D008599 4.9e-310 1068.5 1852 42.1
Peaxi162Scf00201g00021 Petunia axillaris HOM05D001674 ORTHO05D008599 4.5e-303 1045.4 1240 54.7
Solyc03g115510.3 Solanum lycopersicum HOM05D001674 ORTHO05D008599 6.1e-300 1035.0 1244 54.0
PSO017G4474 Papaver somniferum HOM05D001674 ORTHO05D008599 6.3e-297 1025.0 1853 41.6
Sc12g0006570 Simmondsia chinensis HOM05D001674 ORTHO05D008599 8.0e-292 1008.1 1179 55.0
Gohir.D11G036200 Gossypium hirsutum HOM05D001674 ORTHO05D008599 2.0e-290 1003.4 1243 52.7
Zm00001eb108430 Zea mays HOM05D001674 ORTHO05D008599 2.4e-288 996.5 1470 47.3
ATR0064G082 Amborella trichopoda HOM05D001674 ORTHO05D008599 1.0e-286 991.1 1496 45.4
Cpa.g.sc94.3 Carica papaya HOM05D001674 ORTHO05D008599 1.9e-285 986.9 1271 52.1
Nitab4.5_0020510g0010 Nicotiana tabacum HOM05D001674 ORTHO05D008599 1.4e-283 980.7 1001 60.4
unitig_37.g12722 Utricularia gibba HOM05D001674 ORTHO05D008599 1.5e-282 977.2 1145 54.5
Dinv10682 Davidia involucrata HOM05D001674 ORTHO05D008599 1.6e-276 957.2 996 59.5
Lj5A106T70 Lonicera japonica HOM05D001674 ORTHO05D008599 1.8e-275 953.7 1251 52.9
MD14G1208500 Malus domestica HOM05D001674 ORTHO05D008599 3.4e-274 949.5 1219 50.5
Ah.02g113890 Amaranthus hybridus HOM05D001674 ORTHO05D008599 7.5e-258 895.2 1434 45.1
SEGI_10628 Sequoiadendron giganteum HOM05D001674 ORTHO05D008599 2.2e-257 893.6 1362 45.4
CiPaw.11G049600 Carya illinoinensis HOM05D001674 ORTHO05D008599 2.7e-255 886.7 1339 48.0
Actinidia09243 Actinidia chinensis HOM05D001674 ORTHO05D008599 6.9e-243 845.5 984 54.3
Dinv38777 Davidia involucrata HOM05D001674 ORTHO05D008599 3.3e-229 800.0 862 57.8
Pp3c11_9170 Physcomitrium patens HOM05D001674 ORTHO05D008599 9.7e-197 692.2 1643 35.6
SMO117G0045 Selaginella moellendorffii HOM05D001674 ORTHO05D008599 1.4e-190 671.8 1240 40.4
Os06g0235300 Oryza sativa ssp. japonica HOM05D001674 ORTHO05D008599 5.9e-178 629.8 1027 46.3
CDE07G0117 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 1.6e-143 515.4 571 56.2
Pp3c1_9760 Physcomitrium patens HOM05D001674 ORTHO05D008599 1.2e-138 499.2 1113 36.1
AagrBONN_evm.TU.Sc2ySwM_228.3354 Anthoceros agrestis HOM05D001674 ORTHO05D008599 1.2e-133 482.6 908 39.5
CDE07G0766 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 5.4e-131 473.8 811 44.4
Dinv10683 Davidia involucrata HOM05D001674 ORTHO05D008599 2.1e-130 471.9 707 47.0
Actinidia09244 Actinidia chinensis HOM05D001674 ORTHO05D008599 9.6e-120 436.4 728 43.3
Dinv38778 Davidia involucrata HOM05D001674 ORTHO05D008599 1.0e-84 320.1 684 39.5
Actinidia09199 Actinidia chinensis HOM05D001674 ORTHO05D008599 4.2e-75 288.1 356 50.6
Lj5A106T69 Lonicera japonica HOM05D001674 ORTHO05D008599 6.1e-66 257.7 486 40.3
Nitab4.5_0002881g0120 Nicotiana tabacum HOM05D001674 ORTHO05D008599 6.8e-57 227.6 437 39.1
unitig_37.g12721 Utricularia gibba HOM05D001674 ORTHO05D008599 1.6e-45 189.9 193 56.5
Cpa.g.sc94.4 Carica papaya HOM05D001674 ORTHO05D008599 2.3e-33 149.4 174 53.4
Actinidia09203 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.7e-31 143.3 154 58.4
CBR_g23198 Chara braunii HOM05D000019 ORTHO05D000048 1.1e-30 140.6 251 37.5
Ah.02g113880 Amaranthus hybridus HOM05D001674 ORTHO05D008599 2.3e-25 122.9 285 34.4
unitig_37.g12720 Utricularia gibba HOM05D001674 ORTHO05D008599 3.4e-24 119.0 233 34.3
Actinidia09211 Actinidia chinensis HOM05D001674 ORTHO05D008599 9.9e-24 117.5 286 33.6
CBR_g23193 Chara braunii HOM05D000019 ORTHO05D000048 5.4e-22 111.7 109 56.0
PRCOL_00000483 Prasinoderma coloniale HOM05D001674 ORTHO05D008599 1.7e-20 106.7 1260 21.2
Actinidia09202 Actinidia chinensis HOM05D001674 ORTHO05D008599 6.2e-18 98.2 87 58.6
Migut.C00071 Erythranthe guttata HOM05D001674 ORTHO05D008599 6.2e-18 98.2 148 55.4
MD14G1208300 Malus domestica HOM05D001674 ORTHO05D008599 9.9e-16 90.9 253 32.8
CBR_g23187 Chara braunii HOM05D001674 ORTHO05D000353 2.7e-13 82.8 69 62.3
Psat3g111480 Pisum sativum HOM05D001026 ORTHO05D008599 6.0e-13 81.6 63 57.1
Rhsim08G0149700 Rhododendron simsii HOM05D001674 ORTHO05D008599 3.9e-12 79.0 142 41.5
PGSC0003DMG400006818 Solanum tuberosum HOM05D001674 ORTHO05D008599 1.5e-11 77.0 143 37.1
MCO15G104 Micromonas commoda HOM05D001674 ORTHO05D008599 1.3e-10 73.9 164 36.0


User provided reference genes

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