Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold3G01545 Striga asiatica HOM05D006389 ORTHO05D007863 9.7e-261 902.9 438 100.0
Migut.N02297 Erythranthe guttata HOM05D006389 ORTHO05D007863 1.8e-182 642.9 478 69.2
Oeu014062.1 Olea europaea HOM05D006389 ORTHO05D007863 1.9e-168 596.3 484 64.3
SalBow4G3167 Salvia bowleyana HOM05D006389 ORTHO05D007863 1.9e-155 553.1 508 58.1
Nitab4.5_0003250g0030 Nicotiana tabacum HOM05D006389 ORTHO05D007863 3.4e-149 532.3 471 57.7
CAN.G409.1 Capsicum annuum HOM05D006389 ORTHO05D007863 1.1e-147 527.3 485 56.3
Sopen11g021140 Solanum pennellii HOM05D006389 ORTHO05D007863 3.5e-146 522.3 485 55.7
Cfa005620 Carpinus fangiana HOM05D006389 ORTHO05D007863 1.9e-144 516.5 488 54.1
Cc01_g04330 Coffea canephora HOM05D006389 ORTHO05D007863 2.5e-144 516.2 492 55.5
QL01p005900 Quercus lobata HOM05D006389 ORTHO05D007863 7.4e-144 514.6 488 54.7
Manes.06G168100 Manihot esculenta HOM05D006389 ORTHO05D007863 1.5e-141 506.9 484 54.8
CiPaw.14G122900 Carya illinoinensis HOM05D006389 ORTHO05D007863 1.7e-140 503.4 489 53.4
Atru.chr3.2543 Acer truncatum HOM05D006389 ORTHO05D007863 8.5e-140 501.1 486 55.1
COL.COLO4_24825 Corchorus olitorius HOM05D006389 ORTHO05D007863 1.4e-139 500.4 485 53.8
Prupe.6G021400 Prunus persica HOM05D006389 ORTHO05D007863 2.5e-139 499.6 488 53.7
SalBow4G2322 Salvia bowleyana HOM05D006389 ORTHO05D007863 3.2e-139 499.2 508 54.1
PSO339G5502 Papaver somniferum HOM05D006389 ORTHO05D007863 7.2e-139 498.0 486 54.3
MD11G1027100 Malus domestica HOM05D006389 ORTHO05D007863 4.3e-136 488.8 489 53.0
DCAR_023759 Daucus carota HOM05D006389 ORTHO05D007863 5.7e-136 488.4 489 51.1
Potri.001G016800 Populus trichocarpa HOM05D006389 ORTHO05D007863 3.7e-135 485.7 501 52.9
Gohir.A09G115200 Gossypium hirsutum HOM05D006389 ORTHO05D007863 1.4e-134 483.8 486 52.3
Gorai.006G129600 Gossypium raimondii HOM05D006389 ORTHO05D007863 1.5e-133 480.3 489 51.7
GSVIVG01025317001 Vitis vinifera HOM05D006389 ORTHO05D007863 3.4e-133 479.2 478 53.1
Actinidia16300 Actinidia chinensis HOM05D006389 ORTHO05D007863 5.9e-133 478.4 485 53.6
Gohir.D09G111800 Gossypium hirsutum HOM05D006389 ORTHO05D007863 1.7e-132 476.9 489 51.5
RcHm_v2.0_Chr5g0077431 Rosa chinensis HOM05D006389 ORTHO05D007863 6.5e-132 474.9 487 51.7
TAR623G0704 Trochodendron aralioides HOM05D006389 ORTHO05D007863 1.2e-130 470.7 513 50.3
Glyma.11G130800 Glycine max HOM05D006389 ORTHO05D007863 1.6e-130 470.3 490 51.8
TWI34G0575 Tripterygium wilfordii HOM05D006389 ORTHO05D007863 1.4e-129 467.2 491 50.7
FvH4_3g43320 Fragaria vesca HOM05D006389 ORTHO05D007863 3.0e-129 466.1 486 51.4
FAN11G1995 Fragaria x ananassa HOM05D006389 ORTHO05D007863 8.8e-129 464.5 486 51.2
Nn7g36087 Nelumbo nucifera HOM05D006389 ORTHO05D007863 1.1e-128 464.2 488 51.2
arahy.Tifrunner.gnm1.ann1.VM78M6 Arachis hypogaea HOM05D006389 ORTHO05D007863 1.7e-127 460.3 487 50.7
arahy.Tifrunner.gnm1.ann1.XMKE9J Arachis hypogaea HOM05D006389 ORTHO05D007863 1.7e-127 460.3 487 50.7
CsaV3_1G042620 Cucumis sativus L. HOM05D006389 ORTHO05D007863 1.4e-126 457.2 485 50.9
PGR102G3332 Punica granatum HOM05D006389 ORTHO05D007863 1.8e-126 456.8 483 48.4
Sabra01G0011800 Salix brachista HOM05D006389 ORTHO05D007863 3.5e-125 452.6 526 49.2
ClCG03G013410 Citrullus lanatus HOM05D006389 ORTHO05D007863 1.0e-124 451.1 488 49.4
Lalb_Chr03g0026221 Lupinus albus HOM05D006389 ORTHO05D007863 1.3e-124 450.7 487 50.3
Phvul.011G057100 Phaseolus vulgaris HOM05D006389 ORTHO05D007863 1.1e-123 447.6 485 49.3
Cpa.g.sc84.94 Carica papaya HOM05D006389 ORTHO05D007863 6.1e-122 441.8 501 46.7
Sed0000566 Sechium edule HOM05D006389 ORTHO05D007863 6.1e-122 441.8 482 49.6
Hund22074 Selenicereus undatus HOM05D006389 ORTHO05D007863 1.8e-121 440.3 488 47.3
vmacro04176 Vaccinium macrocarpon HOM05D006389 ORTHO05D007863 1.1e-120 437.6 379 61.2
VMungo1127G1170 Vigna mungo HOM05D006389 ORTHO05D007863 4.4e-120 435.6 529 45.9
FAN16G0020 Fragaria x ananassa HOM05D006389 ORTHO05D007863 5.7e-120 435.3 505 48.1
Lj3g0001596 Lotus japonicus HOM05D006389 ORTHO05D007863 7.4e-120 434.9 472 49.4
THA.LOC104799096 Tarenaya hassleriana HOM05D006389 ORTHO05D007863 4.8e-119 432.2 480 48.5
AUR62019259 Chenopodium quinoa HOM05D006389 ORTHO05D007863 6.3e-119 431.8 498 46.8
Carub.0006s1110 Capsella rubella HOM05D006389 ORTHO05D007863 1.8e-118 430.3 477 46.8
Lsat_1_v5_gn_2_101040 Lactuca sativa HOM05D006389 ORTHO05D007863 9.1e-118 427.9 454 51.3
ECA238G3473 Erigeron canadensis HOM05D006389 ORTHO05D007863 2.0e-117 426.8 490 48.8
HanXRQChr13g0407081 Helianthus annuus HOM05D006389 ORTHO05D007863 4.5e-117 425.6 492 48.0
Medtr4g066000 Medicago truncatula HOM05D006389 ORTHO05D007863 4.5e-117 425.6 485 46.6
Aqoxy1G00204 Aquilegia oxysepala HOM05D006389 ORTHO05D007863 1.7e-116 423.7 484 48.6
A03p05690 Brassica napus HOM05D006389 ORTHO05D007863 1.7e-116 423.7 485 47.2
HanXRQChr13g0407091 Helianthus annuus HOM05D006389 ORTHO05D007863 5.0e-116 422.2 479 48.6
AT5G12920 Arabidopsis thaliana HOM05D006389 ORTHO05D007863 6.5e-116 421.8 484 46.3
Dinv36295 Davidia involucrata HOM05D006389 ORTHO05D007863 6.5e-116 421.8 397 55.4
C03p06650 Brassica napus HOM05D006389 ORTHO05D007863 8.5e-116 421.4 486 46.9
BcaB01g05390 Brassica carinata HOM05D006389 ORTHO05D007863 4.2e-115 419.1 486 46.7
HanXRQChr14g0453091 Helianthus annuus HOM05D006389 ORTHO05D007863 4.2e-115 419.1 535 45.0
BraA03t09908Z Brassica rapa HOM05D006389 ORTHO05D007863 1.2e-114 417.5 515 44.7
BolC3t13171H Brassica oleracea HOM05D006389 ORTHO05D007863 6.1e-114 415.2 509 45.0
unitig_699.g19125 Utricularia gibba HOM05D006389 ORTHO05D007863 1.8e-113 413.7 326 64.1
Sp6g31040 Schrenkiella parvula HOM05D006389 ORTHO05D007863 4.0e-113 412.5 480 46.0
CARHR200530 Cardamine hirsuta HOM05D006389 ORTHO05D007863 5.2e-113 412.1 484 45.7
FAN25G0313 Fragaria x ananassa HOM05D006389 ORTHO05D007863 8.8e-113 411.4 488 48.8
Thhalv10015483m.g Eutrema salsugineum HOM05D006389 ORTHO05D007863 2.6e-112 409.8 454 47.1
Psat0s3083g0200 Pisum sativum HOM05D006389 ORTHO05D007863 2.6e-112 409.8 485 45.4
Rhsim13G0224700 Rhododendron simsii HOM05D006389 ORTHO05D007863 4.4e-112 409.1 495 47.1
AL6G23480 Arabidopsis lyrata HOM05D006389 ORTHO05D007863 2.8e-111 406.4 493 45.0
Haze_10646 Corylus avellana HOM05D006389 ORTHO05D007863 1.7e-108 397.1 562 41.3
Sc16g0011670 Simmondsia chinensis HOM05D006389 ORTHO05D007863 2.2e-108 396.7 392 52.8
Aa31LG3G14700 Aethionema arabicum HOM05D006389 ORTHO05D007863 8.5e-108 394.8 482 44.8
TPR.G13666 Trifolium pratense HOM05D006389 ORTHO05D007863 4.2e-107 392.5 463 46.2
AUR62043581 Chenopodium quinoa HOM05D006389 ORTHO05D007863 1.2e-106 391.0 447 46.5
AUR62000087 Chenopodium quinoa HOM05D006389 ORTHO05D007863 1.2e-101 374.4 465 44.9
COL.COLO4_26371 Corchorus olitorius HOM05D006389 ORTHO05D007863 2.9e-100 369.8 428 50.0
Thecc.09G225900 Theobroma cacao HOM05D006389 ORTHO05D007863 3.8e-100 369.4 391 51.2
Zm00001eb245730 Zea mays HOM05D006389 ORTHO05D007863 1.2e-98 364.4 487 42.7
Ah.02g115890 Amaranthus hybridus HOM05D006389 ORTHO05D007863 1.2e-96 357.8 485 40.6
FAN21G1265 Fragaria x ananassa HOM05D002542 ORTHO05D005078 2.3e-92 343.6 380 49.2
MELO3C015208.2 Cucumis melo HOM05D006389 ORTHO05D007863 2.5e-91 340.1 466 44.2
CDE06G1860 Ceratophyllum demersum HOM05D006389 ORTHO05D007863 1.4e-89 334.3 350 51.7
Os02g0591600 Oryza sativa ssp. japonica HOM05D006389 ORTHO05D007863 2.2e-87 327.0 486 39.7
HanXRQChr14g0455041 Helianthus annuus HOM05D006389 ORTHO05D007863 6.6e-84 315.5 334 51.2
ATR0605G326 Amborella trichopoda HOM05D006389 ORTHO05D007863 1.6e-82 310.8 453 40.6
Hma1.2p1_0728F.1_g209350 Hydrangea macrophylla HOM05D006389 ORTHO05D007863 1.1e-81 308.1 253 64.4
HPP92_018945 Vanilla planifolia HOM05D006389 ORTHO05D007863 2.0e-80 303.9 454 39.4
Nitab4.5_0000175g0150 Nicotiana tabacum HOM05D006389 ORTHO05D007863 3.4e-80 303.1 271 57.9
MSTRG.17573 Avicennia marina HOM05D006389 ORTHO05D007863 5.4e-78 295.8 179 77.7
Solyc11g045510.3 Solanum lycopersicum HOM05D006389 ORTHO05D007863 5.6e-75 285.8 268 55.6
Eucgr.B03666 Eucalyptus grandis HOM05D006389 ORTHO05D007863 2.1e-66 257.3 286 48.6
PSO384G2577 Papaver somniferum HOM05D006389 ORTHO05D007863 2.6e-64 250.4 256 51.2
Pp3c6_27180 Physcomitrium patens HOM05D006389 ORTHO05D007863 5.8e-64 249.2 497 32.6
CSS0004435 Camellia sinensis var. sinensis HOM05D006389 ORTHO05D007863 5.4e-62 242.7 288 47.2
Ca_20580_v3 Cicer arietinum L. HOM05D006389 ORTHO05D007863 3.9e-60 236.5 330 42.1
Peaxi162Scf00559g00114 Petunia axillaris HOM05D006389 ORTHO05D007863 1.8e-57 227.6 171 67.3
Ciclev10018279m.g Citrus clementina HOM05D006389 ORTHO05D007863 6.4e-55 219.2 164 63.4
Hma1.2p1_0728F.1_g209340 Hydrangea macrophylla HOM05D006389 ORTHO05D007863 3.5e-53 213.4 186 57.5
Mapoly0014s0037 Marchantia polymorpha HOM05D006389 ORTHO05D007863 2.3e-52 210.7 508 31.7
Ciclev10016567m.g Citrus clementina HOM05D006389 ORTHO05D007863 4.9e-47 193.0 243 45.7
MBI01_g14331_MAGBIO Magnolia biondii HOM05D006389 ORTHO05D007863 3.9e-44 183.3 125 68.8
AagrBONN_evm.TU.Sc2ySwM_228.3166 Anthoceros agrestis HOM05D006389 ORTHO05D007863 5.1e-44 183.0 466 29.6
SHI30505 Sapria himalayana HOM05D006389 ORTHO05D007863 1.1e-38 165.2 171 49.7
Nitab4.5_0000175g0160 Nicotiana tabacum HOM05D006389 ORTHO05D007863 4.6e-37 159.8 130 58.5
Lj1A361T11 Lonicera japonica HOM05D006389 ORTHO05D007863 3.0e-36 157.1 161 50.9
CBR_g1099 Chara braunii HOM05D000019 ORTHO05D000002 8.7e-28 129.0 350 29.7
HanXRQChr14g0450961 Helianthus annuus HOM05D006389 ORTHO05D007863 1.4e-22 111.7 185 36.8
CSS0015492 Camellia sinensis var. sinensis HOM05D006389 ORTHO05D007863 4.6e-21 106.7 81 61.7
SHI30507 Sapria himalayana HOM05D006389 ORTHO05D007863 2.5e-19 100.9 90 51.1
vmacro04177 Vaccinium macrocarpon HOM05D006389 ORTHO05D007863 1.3e-15 88.6 92 48.9
HanXRQChr13g0389161 Helianthus annuus HOM05D006389 ORTHO05D007863 1.4e-14 85.1 53 73.6
arahy.Tifrunner.gnm1.ann1.RII35Q Arachis hypogaea HOM05D006389 ORTHO05D007863 5.1e-12 76.6 149 30.2
Psat4g014880 Pisum sativum HOM05D006389 ORTHO05D007863 5.1e-12 76.6 147 33.3
Peaxi162Scf00185g00310 Petunia axillaris HOM05D006389 ORTHO05D007863 2.0e-11 74.7 93 44.1
SEGI_11371 Sequoiadendron giganteum HOM05D006389 ORTHO05D007863 1.6e-08 65.1 78 43.6
MBI01_g14332_MAGBIO Magnolia biondii HOM05D006389 ORTHO05D007863 3.8e-07 60.5 73 37.0
Peaxi162Scf00559g00110 Petunia axillaris HOM05D006389 ORTHO05D007863 1.5e-06 58.5 51 52.9


User provided reference genes

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