Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold37G14870 Striga asiatica HOM05D011272 ORTHO05D010636 4.5e-146 521.2 252 100.0
SGA_v2.0_scaffold80G25964 Striga asiatica HOM05D011272 ORTHO05D010636 3.6e-50 202.6 226 44.7
SGA_v2.0_scaffold123G33386 Striga asiatica HOM05D011272 ORTHO05D010636 2.8e-26 123.2 101 53.5
SGA_v2.0_scaffold450G51801 Striga asiatica HOM05D011272 ORTHO05D010636 2.7e-21 106.7 106 48.1
SGA_v2.0_scaffold5G03062 Striga asiatica HOM05D011272 ORTHO05D010636 1.3e-20 104.4 89 51.7
SGA_v2.0_scaffold214G42292 Striga asiatica HOM05D011272 ORTHO05D010636 5.0e-20 102.4 102 48.0
SGA_v2.0_scaffold11G05618 Striga asiatica HOM05D011272 ORTHO05D010636 1.3e-15 87.8 89 48.3
SGA_v2.0_scaffold17G08173 Striga asiatica HOM05D000003 ORTHO05D000004 2.9e-15 86.7 138 38.4
SGA_v2.0_scaffold59G20769 Striga asiatica HOM05D011272 ORTHO05D010636 3.2e-14 83.2 95 37.9
SGA_v2.0_scaffold118G32446 Striga asiatica HOM05D000003 ORTHO05D000004 7.1e-14 82.0 116 33.6
SGA_v2.0_scaffold6G03466 Striga asiatica HOM05D000003 ORTHO05D000004 3.5e-13 79.7 121 31.4
SGA_v2.0_scaffold206G41847 Striga asiatica HOM05D000254 ORTHO05D010636 3.0e-12 76.6 84 40.5
SGA_v2.0_scaffold259G45819 Striga asiatica HOM05D000003 ORTHO05D000004 6.6e-12 75.5 105 38.1
SGA_v2.0_scaffold53G19333 Striga asiatica HOM05D009140 ORTHO05D010636 6.6e-12 75.5 111 31.5
SGA_v2.0_scaffold11G05675 Striga asiatica HOM05D023122 ORTHO05D010636 1.1e-11 74.7 95 40.0
SGA_v2.0_scaffold13G06590 Striga asiatica HOM05D011272 ORTHO05D010636 3.3e-11 73.2 87 44.8
SGA_v2.0_scaffold10G05079 Striga asiatica HOM05D000003 ORTHO05D000004 4.3e-11 72.8 114 32.5
SGA_v2.0_scaffold146G36167 Striga asiatica HOM05D011272 ORTHO05D010636 4.3e-11 72.8 63 54.0
SGA_v2.0_scaffold12G06017 Striga asiatica HOM05D009140 ORTHO05D010636 9.5e-11 71.6 117 29.9
SGA_v2.0_scaffold2392G54112 Striga asiatica HOM05D000003 ORTHO05D000006 1.2e-10 71.2 123 35.0
SGA_v2.0_scaffold484G52346 Striga asiatica HOM05D000003 ORTHO05D010636 1.2e-10 71.2 107 39.3
BcaB01g01579 Brassica carinata HOM05D000003 ORTHO05D001498 1.6e-10 70.9 109 33.9
SGA_v2.0_scaffold102G29891 Striga asiatica HOM05D003766 ORTHO05D004607 1.6e-10 70.9 103 33.0
SGA_v2.0_scaffold11G05791 Striga asiatica HOM05D000563 ORTHO05D000536 2.8e-10 70.1 247 26.3
SGA_v2.0_scaffold203G41506 Striga asiatica HOM05D015799 ORTHO05D010636 2.8e-10 70.1 103 37.9
SGA_v2.0_scaffold231G43436 Striga asiatica HOM05D015799 ORTHO05D010636 3.6e-10 69.7 86 39.5
SGA_v2.0_scaffold63G21783 Striga asiatica HOM05D009108 ORTHO05D011557 3.6e-10 69.7 88 39.8
SGA_v2.0_scaffold145G36011 Striga asiatica HOM05D009140 ORTHO05D010636 6.2e-10 68.9 106 33.0
SGA_v2.0_scaffold151G36755 Striga asiatica HOM05D000003 ORTHO05D000004 6.2e-10 68.9 114 34.2
SGA_v2.0_scaffold23G10019 Striga asiatica HOM05D000003 ORTHO05D000004 6.2e-10 68.9 117 31.6
SGA_v2.0_scaffold56G19898 Striga asiatica HOM05D000003 ORTHO05D010636 6.2e-10 68.9 112 40.2
BcaC07g37731 Brassica carinata HOM05D000003 ORTHO05D001498 8.1e-10 68.6 123 30.9
SGA_v2.0_scaffold208G41982 Striga asiatica HOM05D009140 ORTHO05D010636 8.1e-10 68.6 105 33.3
SGA_v2.0_scaffold163G37969 Striga asiatica HOM05D000003 ORTHO05D000004 1.8e-09 67.4 114 33.3
SGA_v2.0_scaffold179G39541 Striga asiatica HOM05D023122 ORTHO05D010636 3.1e-09 66.6 81 38.3
SGA_v2.0_scaffold93G28364 Striga asiatica HOM05D009140 ORTHO05D010636 5.2e-09 65.9 98 36.7
SGA_v2.0_scaffold57G20155 Striga asiatica HOM05D009140 ORTHO05D010636 1.2e-08 64.7 73 41.1
SGA_v2.0_scaffold283G46986 Striga asiatica HOM05D000003 ORTHO05D010636 1.5e-08 64.3 97 37.1
CANSAT78G0832 Cannabis sativa HOM05D000003 ORTHO05D000004 2.6e-08 63.5 102 34.3
SGA_v2.0_scaffold75G24875 Striga asiatica HOM05D011272 ORTHO05D010636 2.6e-08 63.5 55 52.7
TWI14G0340 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 3.4e-08 63.2 110 33.6
Rhsim01G0174200 Rhododendron simsii HOM05D000003 ORTHO05D000004 4.4e-08 62.8 121 33.1
TWI31G1374 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 4.4e-08 62.8 110 32.7
Aa31sc25G170 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.8e-08 62.4 111 34.2
BcaB05g22054 Brassica carinata HOM05D000003 ORTHO05D001498 5.8e-08 62.4 107 32.7
BcaC03g14667 Brassica carinata HOM05D000003 ORTHO05D000004 5.8e-08 62.4 109 33.9
CANSAT56G4250 Cannabis sativa HOM05D000003 ORTHO05D000004 5.8e-08 62.4 137 27.0
AUR62026917 Chenopodium quinoa HOM05D000003 ORTHO05D000004 5.8e-08 62.4 111 31.5
SGA_v2.0_scaffold254G45257 Striga asiatica HOM05D005881 ORTHO05D007298 5.8e-08 62.4 62 41.9
SGA_v2.0_scaffold231G43406 Striga asiatica HOM05D000024 ORTHO05D000006 7.6e-08 62.0 106 34.0
TPR.G22130 Trifolium pratense HOM05D000003 ORTHO05D000004 7.6e-08 62.0 120 31.7
TWI32G0681 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 7.6e-08 62.0 110 32.7
TWI53G0004 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 7.6e-08 62.0 110 32.7
SGA_v2.0_scaffold241G44220 Striga asiatica HOM05D000003 ORTHO05D000004 9.9e-08 61.6 112 31.2
SGA_v2.0_scaffold232G43488 Striga asiatica HOM05D011272 ORTHO05D010636 1.3e-07 61.2 96 33.3
Aa31csc275G20 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.7e-07 60.8 103 34.0
BcaC09g48324 Brassica carinata HOM05D000003 ORTHO05D000004 1.7e-07 60.8 115 31.3
SGA_v2.0_scaffold16G07865 Striga asiatica HOM05D000341 ORTHO05D001197 1.7e-07 60.8 115 32.2
Aa31LG2G16390 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.2e-07 60.5 120 30.8
Atru.chr1.2568 Acer truncatum HOM05D000003 ORTHO05D000004 3.7e-07 59.7 140 30.7
SGA_v2.0_scaffold244G44341 Striga asiatica HOM05D000003 ORTHO05D000004 3.7e-07 59.7 141 25.5
Aa31LG11G5950 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.9e-07 59.3 103 32.0
CiPaw.06G023000 Carya illinoinensis HOM05D000003 ORTHO05D000004 4.9e-07 59.3 120 30.0
SGA_v2.0_scaffold134G34731 Striga asiatica HOM05D009140 ORTHO05D000004 4.9e-07 59.3 68 32.4
SGA_v2.0_scaffold367G50060 Striga asiatica HOM05D000003 ORTHO05D010636 4.9e-07 59.3 96 36.5
SGA_v2.0_scaffold36G14413 Striga asiatica HOM05D000003 ORTHO05D011213 4.9e-07 59.3 116 28.4
CiPaw.06G052300 Carya illinoinensis HOM05D000003 ORTHO05D000004 6.4e-07 58.9 134 28.4
Rhsim11G0146500 Rhododendron simsii HOM05D000003 ORTHO05D000004 6.4e-07 58.9 122 30.3
SGA_v2.0_scaffold122G33296 Striga asiatica HOM05D000003 ORTHO05D000004 6.4e-07 58.9 111 28.8
Sp1g31060 Schrenkiella parvula HOM05D000003 ORTHO05D000004 8.3e-07 58.5 123 30.1
SGA_v2.0_scaffold72G24192 Striga asiatica HOM05D026623 ORTHO05D403235 8.3e-07 58.5 85 28.2
SGA_v2.0_scaffold83G26455 Striga asiatica HOM05D000003 ORTHO05D010636 8.3e-07 58.5 83 38.6
CANSAT78G1434 Cannabis sativa HOM05D000003 ORTHO05D000004 1.1e-06 58.2 136 25.7
Rhsim07G0154700 Rhododendron simsii HOM05D001582 ORTHO05D001598 1.1e-06 58.2 102 29.4
SGA_v2.0_scaffold382G50402 Striga asiatica HOM05D000003 ORTHO05D000004 1.1e-06 58.2 121 27.3
SGA_v2.0_scaffold57G20243 Striga asiatica HOM05D011272 ORTHO05D010636 1.1e-06 58.2 68 38.2
Atru.chr2.108 Acer truncatum HOM05D000003 ORTHO05D000004 1.4e-06 57.8 164 26.2
Atru.chr8.899 Acer truncatum HOM05D000003 ORTHO05D000004 1.4e-06 57.8 140 26.4
BcaB08g35581 Brassica carinata HOM05D000003 ORTHO05D001498 1.4e-06 57.8 98 30.6
CANSAT35G1919 Cannabis sativa HOM05D000003 ORTHO05D000004 1.4e-06 57.8 160 30.0
Aa31sc256G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.4e-06 57.0 115 31.3
Aa31sc360G50 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.4e-06 57.0 116 30.2
BolC6t37477H Brassica oleracea HOM05D000003 ORTHO05D001498 2.4e-06 57.0 107 31.8
AUR62038322 Chenopodium quinoa HOM05D000577 ORTHO05D001093 2.4e-06 57.0 111 28.8
Aa31LG6G11540 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.2e-06 56.6 107 30.8
Aa31sc387G30 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.2e-06 56.6 134 30.6
PSO063G5229 Papaver somniferum HOM05D003407 ORTHO05D001026 3.2e-06 56.6 134 27.6
BraA04t16803Z Brassica rapa HOM05D000003 ORTHO05D001498 4.1e-06 56.2 110 32.7
FvH4_1g25610 Fragaria vesca HOM05D000003 ORTHO05D000004 4.1e-06 56.2 105 33.3
SGA_v2.0_scaffold67G22642 Striga asiatica HOM05D000407 ORTHO05D000004 4.1e-06 56.2 114 28.9
Aa31sc324G40 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.4e-06 55.8 115 30.4
Manes.08G042350 Manihot esculenta HOM05D000003 ORTHO05D000004 5.4e-06 55.8 110 28.2
QL01p036379 Quercus lobata HOM05D000003 ORTHO05D000004 5.4e-06 55.8 125 28.8
SGA_v2.0_scaffold156G37281 Striga asiatica HOM05D011272 ORTHO05D010636 5.4e-06 55.8 69 36.2
Aa31LG10G9400 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.1e-06 55.5 123 27.6
CANSAT01G2140 Cannabis sativa HOM05D000003 ORTHO05D000167 7.1e-06 55.5 118 28.0
CANSAT11G0084 Cannabis sativa HOM05D000003 ORTHO05D000004 7.1e-06 55.5 141 27.0
SGA_v2.0_scaffold34G13687 Striga asiatica HOM05D011272 ORTHO05D010636 7.1e-06 55.5 79 38.0
Aa31LG2G16100 Aethionema arabicum HOM05D000003 ORTHO05D000004 9.2e-06 55.1 100 32.0
RhsimUnG0236900 Rhododendron simsii HOM05D000003 ORTHO05D000004 9.2e-06 55.1 243 21.8
SGA_v2.0_scaffold212G42204 Striga asiatica HOM05D009140 ORTHO05D011213 9.2e-06 55.1 111 30.6
SGA_v2.0_scaffold43G16397 Striga asiatica HOM05D009140 ORTHO05D010215 9.2e-06 55.1 96 33.3


User provided reference genes

Program Settings