Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold37G14637 Striga asiatica HOM05D005705 ORTHO05D007152 7.8e-230 800.0 387 100.0
Migut.D01284 Erythranthe guttata HOM05D005705 ORTHO05D007152 3.6e-142 508.8 378 66.9
Nn4g22223 Nelumbo nucifera HOM05D005705 ORTHO05D007152 3.0e-133 479.2 319 73.0
Dinv11204 Davidia involucrata HOM05D005705 ORTHO05D007152 6.8e-133 478.0 380 64.2
Nitab4.5_0003383g0010 Nicotiana tabacum HOM05D005705 ORTHO05D007152 5.4e-130 468.4 375 63.5
Solyc03g097550.3 Solanum lycopersicum HOM05D005705 ORTHO05D007152 7.0e-130 468.0 379 62.8
Sopen03g028300 Solanum pennellii HOM05D005705 ORTHO05D007152 7.0e-130 468.0 379 62.8
CAN.G732.1 Capsicum annuum HOM05D005705 ORTHO05D007152 7.8e-129 464.5 376 62.0
Nitab4.5_0001332g0070 Nicotiana tabacum HOM05D005705 ORTHO05D007152 1.3e-128 463.8 377 62.6
Peaxi162Scf00516g00214 Petunia axillaris HOM05D005705 ORTHO05D007152 1.7e-128 463.4 378 62.2
Cc08_g11650 Coffea canephora HOM05D005705 ORTHO05D007152 1.9e-127 459.9 375 62.7
Nn4g22220 Nelumbo nucifera HOM05D005705 ORTHO05D007152 1.0e-125 454.1 373 62.5
VMungo1309G0782 Vigna mungo HOM05D005705 ORTHO05D007152 4.0e-125 452.2 388 59.3
CANSAT80G2532 Cannabis sativa HOM05D005705 ORTHO05D007152 2.6e-124 449.5 366 60.9
CSS0038740 Camellia sinensis var. sinensis HOM05D005705 ORTHO05D007152 4.4e-124 448.7 401 58.4
Sabra15G0121700 Salix brachista HOM05D005705 ORTHO05D007152 7.5e-124 448.0 380 59.7
CiPaw.11G003500 Carya illinoinensis HOM05D005705 ORTHO05D007152 2.9e-123 446.0 384 60.4
Potri.015G101300 Populus trichocarpa HOM05D005705 ORTHO05D007152 2.9e-123 446.0 384 59.1
Medtr3g098940 Medicago truncatula HOM05D005705 ORTHO05D007152 8.3e-123 444.5 384 59.6
Phvul.009G162600 Phaseolus vulgaris HOM05D005705 ORTHO05D007152 1.1e-122 444.1 383 60.3
Aqoxy3G01676 Aquilegia oxysepala HOM05D005705 ORTHO05D007152 1.4e-122 443.7 370 60.8
Psat5g053040 Pisum sativum HOM05D005705 ORTHO05D007152 2.4e-122 443.0 383 59.3
THA.LOC104811568 Tarenaya hassleriana HOM05D005705 ORTHO05D007152 2.4e-122 443.0 369 59.9
Atru.chr6.1874 Acer truncatum HOM05D005705 ORTHO05D007152 4.1e-122 442.2 387 58.4
Manes.06G123000 Manihot esculenta HOM05D005705 ORTHO05D007152 5.4e-122 441.8 381 59.3
Ca_16064_v3 Cicer arietinum L. HOM05D005705 ORTHO05D007152 7.0e-122 441.4 377 59.7
RcHm_v2.0_Chr7g0189351 Rosa chinensis HOM05D005705 ORTHO05D007152 2.0e-121 439.9 383 58.2
GSVIVG01008591001 Vitis vinifera HOM05D005705 ORTHO05D007152 2.7e-121 439.5 376 59.3
Lj1g0017194 Lotus japonicus HOM05D005705 ORTHO05D007152 3.5e-121 439.1 383 59.3
Glyma.06G167100 Glycine max HOM05D005705 ORTHO05D007152 1.0e-120 437.6 383 59.0
FAN13G0195 Fragaria x ananassa HOM05D005705 ORTHO05D007152 1.7e-120 436.8 390 56.9
FAN18G0862 Fragaria x ananassa HOM05D005705 ORTHO05D007152 2.3e-120 436.4 394 56.6
Gorai.003G119300 Gossypium raimondii HOM05D005705 ORTHO05D007152 2.3e-120 436.4 374 59.4
HanXRQChr02g0034161 Helianthus annuus HOM05D005705 ORTHO05D007152 3.9e-120 435.6 372 59.1
Lalb_Chr08g0237371 Lupinus albus HOM05D005705 ORTHO05D007152 8.6e-120 434.5 376 60.1
ECA247G0704 Erigeron canadensis HOM05D005705 ORTHO05D007152 1.5e-119 433.7 375 57.9
MD14G1151500 Malus domestica HOM05D005705 ORTHO05D007152 1.9e-119 433.3 374 59.1
Gohir.D03G113100 Gossypium hirsutum HOM05D005705 ORTHO05D007152 4.3e-119 432.2 374 58.8
ClCG06G018130 Citrullus lanatus HOM05D005705 ORTHO05D007152 5.6e-119 431.8 368 59.8
Ciclev10031733m.g Citrus clementina HOM05D005705 ORTHO05D007152 5.6e-119 431.8 370 60.8
Eucgr.K02692 Eucalyptus grandis HOM05D005705 ORTHO05D007152 1.6e-118 430.3 377 57.0
MD06G1136700 Malus domestica HOM05D005705 ORTHO05D007152 2.1e-118 429.9 374 58.8
TWI14G0152 Tripterygium wilfordii HOM05D005705 ORTHO05D007152 6.2e-118 428.3 380 55.5
DCAR_026236 Daucus carota HOM05D005705 ORTHO05D007152 1.1e-117 427.6 374 58.8
FAN08G2466 Fragaria x ananassa HOM05D005705 ORTHO05D007152 1.4e-117 427.2 397 55.4
AUR62034819 Chenopodium quinoa HOM05D005705 ORTHO05D007152 2.3e-117 426.4 325 63.1
Thecc.03G135500 Theobroma cacao HOM05D005705 ORTHO05D007152 2.3e-117 426.4 374 59.4
TPR.G35256 Trifolium pratense HOM05D005705 ORTHO05D007152 3.1e-117 426.0 362 61.0
AUR62029555 Chenopodium quinoa HOM05D005705 ORTHO05D007152 4.0e-117 425.6 325 63.4
Prupe.5G146600 Prunus persica HOM05D005705 ORTHO05D007152 1.5e-116 423.7 356 59.0
CsaV3_1G000320 Cucumis sativus L. HOM05D005705 ORTHO05D007152 9.8e-116 421.0 376 56.9
Lsat_1_v5_gn_1_32681 Lactuca sativa HOM05D005705 ORTHO05D007152 6.4e-115 418.3 376 57.4
vmacro19145 Vaccinium macrocarpon HOM05D005705 ORTHO05D007152 4.1e-114 415.6 410 55.4
arahy.Tifrunner.gnm1.ann1.5ZS0BP Arachis hypogaea HOM05D005705 ORTHO05D007152 5.4e-114 415.2 385 56.9
Oeu061128.1 Olea europaea HOM05D005705 ORTHO05D007152 1.3e-112 410.6 437 52.2
Eucgr.K02697 Eucalyptus grandis HOM05D005705 ORTHO05D007152 1.7e-112 410.2 362 57.7
arahy.Tifrunner.gnm1.ann1.U15GQW Arachis hypogaea HOM05D005705 ORTHO05D007152 3.9e-112 409.1 421 52.3
ECA247G2912 Erigeron canadensis HOM05D005705 ORTHO05D007152 5.1e-112 408.7 369 56.4
Eucgr.B00082 Eucalyptus grandis HOM05D005705 ORTHO05D007152 6.6e-112 408.3 368 56.2
PGR044G0296 Punica granatum HOM05D005705 ORTHO05D007152 3.3e-111 406.0 388 55.7
ATR0582G303 Amborella trichopoda HOM05D005705 ORTHO05D007152 7.3e-111 404.8 385 54.3
Gohir.A03G053840 Gossypium hirsutum HOM05D005705 ORTHO05D007152 1.6e-110 403.7 383 55.4
Eucgr.F01610 Eucalyptus grandis HOM05D005705 ORTHO05D007152 1.4e-109 400.6 371 55.0
Aa31LG3G7650 Aethionema arabicum HOM05D005705 ORTHO05D007152 4.0e-109 399.1 382 53.4
PSO478G3581 Papaver somniferum HOM05D005705 ORTHO05D007152 4.4e-108 395.6 383 52.5
PSO017G1135 Papaver somniferum HOM05D005705 ORTHO05D007152 9.9e-108 394.4 383 52.5
QL10p001835 Quercus lobata HOM05D005705 ORTHO05D007152 2.9e-107 392.9 513 45.2
PGR083G0448 Punica granatum HOM05D005705 ORTHO05D007152 4.9e-107 392.1 334 59.9
Sp6g13350 Schrenkiella parvula HOM05D005705 ORTHO05D007152 5.4e-106 388.7 364 53.8
Zm00001eb241970 Zea mays HOM05D005705 ORTHO05D007152 5.4e-106 388.7 371 54.2
Thhalv10013761m.g Eutrema salsugineum HOM05D005705 ORTHO05D007152 1.2e-105 387.5 370 54.3
AL8G25400 Arabidopsis lyrata HOM05D005705 ORTHO05D007152 2.1e-105 386.7 364 53.6
Carub.0008s1118 Capsella rubella HOM05D005705 ORTHO05D007152 1.3e-104 384.0 364 53.6
AT5G51140 Arabidopsis thaliana HOM05D005705 ORTHO05D007152 1.7e-104 383.6 365 53.7
BcaC01g06097 Brassica carinata HOM05D005705 ORTHO05D007152 1.7e-104 383.6 366 54.1
BcaC01g06077 Brassica carinata HOM05D005705 ORTHO05D007152 5.1e-104 382.1 367 53.7
C03p19170 Brassica napus HOM05D005705 ORTHO05D007152 5.1e-104 382.1 366 53.8
CARHR256910 Cardamine hirsuta HOM05D005705 ORTHO05D007152 5.1e-104 382.1 365 53.2
EL10Ac5g11353 Beta vulgaris HOM05D005705 ORTHO05D007152 1.1e-103 380.9 380 51.8
BraA03t10919Z Brassica rapa HOM05D005705 ORTHO05D007152 1.1e-103 380.9 367 54.8
BolC3t14305H Brassica oleracea HOM05D005705 ORTHO05D007152 4.3e-103 379.0 367 54.0
FAN04G2238 Fragaria x ananassa HOM05D005705 ORTHO05D007152 5.6e-103 378.6 430 48.8
BolC2t08194H Brassica oleracea HOM05D005705 ORTHO05D007152 2.1e-102 376.7 356 54.2
A02p12470 Brassica napus HOM05D005705 ORTHO05D007152 3.6e-102 375.9 354 54.2
BraA02t06310Z Brassica rapa HOM05D005705 ORTHO05D007152 3.6e-102 375.9 354 54.2
Rhsim08G0193700 Rhododendron simsii HOM05D005705 ORTHO05D007152 4.7e-102 375.6 342 57.3
Eucgr.B00079 Eucalyptus grandis HOM05D005705 ORTHO05D007152 6.2e-102 375.2 354 54.5
C02p20570 Brassica napus HOM05D005705 ORTHO05D007152 1.4e-101 374.0 355 53.8
A03p16280 Brassica napus HOM05D005705 ORTHO05D007152 3.1e-101 372.9 346 54.3
BcaC03g14622 Brassica carinata HOM05D005705 ORTHO05D007152 2.6e-100 369.8 349 53.6
Sed0013194 Sechium edule HOM05D005705 ORTHO05D007152 2.6e-100 369.8 356 55.3
TAR374G1739 Trochodendron aralioides HOM05D005705 ORTHO05D007152 1.2e-97 360.9 310 60.6
Actinidia18330 Actinidia chinensis HOM05D005705 ORTHO05D007152 9.6e-95 351.3 313 59.1
Sc22g0003610 Simmondsia chinensis HOM05D005705 ORTHO05D007152 6.4e-91 338.6 373 50.4
Haze_07188 Corylus avellana HOM05D005705 ORTHO05D007152 8.4e-91 338.2 389 48.8
Eucgr.K02689 Eucalyptus grandis HOM05D005705 ORTHO05D007152 1.1e-90 337.8 349 52.1
Lj5A92G46 Lonicera japonica HOM05D005705 ORTHO05D007152 9.3e-90 334.7 427 47.1
Duzib084G0308 Durio zibethinus HOM05D005705 ORTHO05D007152 7.3e-87 325.1 323 53.6
MSTRG.4614 Avicennia marina HOM05D005705 ORTHO05D007152 1.8e-85 320.5 274 60.9
MELO3C026185.2 Cucumis melo HOM05D005705 ORTHO05D007152 4.0e-85 319.3 328 52.4
Dinv23185 Davidia involucrata HOM05D005705 ORTHO05D007152 1.5e-84 317.4 275 60.0
HPP92_015136 Vanilla planifolia HOM05D005705 ORTHO05D007152 4.2e-82 309.3 373 44.2
Hma1.2p1_0168F.1_g074310 Hydrangea macrophylla HOM05D005705 ORTHO05D007152 1.8e-80 303.9 355 49.9
Pp3c10_5730 Physcomitrium patens HOM05D005705 ORTHO05D007152 6.2e-78 295.4 488 36.1
FvH4_5g08961 Fragaria vesca HOM05D005705 ORTHO05D007152 2.4e-77 293.5 274 55.1
RcHm_v2.0_Chr7g0189401 Rosa chinensis HOM05D005705 ORTHO05D007152 3.8e-75 286.2 305 51.5
Ah.11g046430 Amaranthus hybridus HOM05D005705 ORTHO05D007152 1.9e-74 283.9 395 42.8
Mapoly0190s0007 Marchantia polymorpha HOM05D005705 ORTHO05D007152 4.6e-73 279.3 466 36.7
PGSC0003DMG400031733 Solanum tuberosum HOM05D005705 ORTHO05D007152 1.3e-64 251.1 227 58.1
Hund10107 Selenicereus undatus HOM05D005705 ORTHO05D007152 6.7e-64 248.8 196 62.8
Gohir.A03G053960 Gossypium hirsutum HOM05D005705 ORTHO05D007152 5.0e-59 232.6 222 53.2
MBI11_g13060_MAGBIO Magnolia biondii HOM05D005705 ORTHO05D007152 1.1e-55 221.5 135 77.0
Gohir.D03G113075 Gossypium hirsutum HOM05D005705 ORTHO05D007152 4.8e-54 216.1 147 70.1
Cpa.g.sc4.149 Carica papaya HOM05D005705 ORTHO05D007152 1.5e-52 211.1 141 69.5
Os02g0512300 Oryza sativa ssp. japonica HOM05D005705 ORTHO05D007152 1.2e-41 174.9 120 68.3
Cfa023901 Carpinus fangiana HOM05D005705 ORTHO05D007152 1.6e-41 174.5 404 32.4
Pp3c10_5680 Physcomitrium patens HOM05D005705 ORTHO05D007152 1.3e-38 164.9 309 34.0
CDE02G4520 Ceratophyllum demersum HOM05D005705 ORTHO05D007152 3.8e-35 153.3 197 44.7
AagrBONN_evm.TU.Sc2ySwM_362.2453 Anthoceros agrestis HOM05D005705 ORTHO05D007152 3.2e-34 150.2 206 41.7
Haze_26548 Corylus avellana HOM05D005705 ORTHO05D007152 5.3e-29 132.9 282 30.9
Haze_27069 Corylus avellana HOM05D005705 ORTHO05D007152 9.1e-29 132.1 282 30.9
Cre17.g702400 Chlamydomonas reinhardtii HOM05D005705 ORTHO05D007152 5.0e-27 126.3 302 29.8
Eucgr.K02687 Eucalyptus grandis HOM05D005705 ORTHO05D007152 1.6e-25 121.3 93 59.1
Cpa.g.sc4.145 Carica papaya HOM05D005705 ORTHO05D007152 1.0e-24 118.6 73 74.0
CBR_g48327 Chara braunii HOM05D005705 ORTHO05D007152 9.1e-21 105.5 142 46.5
arahy.Tifrunner.gnm1.ann1.N812UT Arachis hypogaea HOM05D005705 ORTHO05D007152 2.0e-20 104.4 75 72.0
Cpa.g.sc4.148 Carica papaya HOM05D005705 ORTHO05D007152 2.0e-20 104.4 107 53.3
arahy.Tifrunner.gnm1.ann1.5M4P4Y Arachis hypogaea HOM05D005705 ORTHO05D007152 2.9e-19 100.5 75 70.7
arahy.Tifrunner.gnm1.ann1.MH3CCF Arachis hypogaea HOM05D001440 ORTHO05D007152 1.1e-18 98.6 63 76.2
arahy.Tifrunner.gnm1.ann1.WM01PM Arachis hypogaea HOM05D001440 ORTHO05D013218 3.3e-18 97.1 63 74.6
arahy.Tifrunner.gnm1.ann1.DA2DAM Arachis hypogaea HOM05D005705 ORTHO05D007152 4.2e-18 96.7 75 68.0
MCO02G106 Micromonas commoda HOM05D005705 ORTHO05D007152 3.6e-17 93.6 135 37.8
CAN.G1841.1 Capsicum annuum HOM05D000176 ORTHO05D014553 9.8e-07 58.9 38 65.8


User provided reference genes

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