Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold371G50155 Striga asiatica HOM05D005995 ORTHO05D007362 1.4e-119 433.0 214 100.0
MSTRG.10034 Avicennia marina HOM05D005995 ORTHO05D007362 9.7e-65 250.8 166 75.9
Cpa.g.sc2.418 Carica papaya HOM05D005995 ORTHO05D007362 8.2e-64 247.7 157 74.5
Cc01_g14560 Coffea canephora HOM05D005995 ORTHO05D007362 5.3e-63 245.0 166 71.7
Thecc.09G353200 Theobroma cacao HOM05D005995 ORTHO05D007362 5.3e-63 245.0 169 71.0
CAN.G1095.10 Capsicum annuum HOM05D005995 ORTHO05D007362 2.0e-62 243.0 168 71.4
Nitab4.5_0013485g0010 Nicotiana tabacum HOM05D005995 ORTHO05D007362 7.7e-62 241.1 168 69.6
Oeu031050.1 Olea europaea HOM05D005995 ORTHO05D007362 1.0e-61 240.7 166 73.5
Solyc06g082160.4 Solanum lycopersicum HOM05D005995 ORTHO05D007362 1.0e-61 240.7 188 65.4
Sopen06g033540 Solanum pennellii HOM05D005995 ORTHO05D007362 1.3e-61 240.4 167 70.7
PGSC0003DMG400030447 Solanum tuberosum HOM05D005995 ORTHO05D007362 1.3e-61 240.4 167 70.7
CSS0037016 Camellia sinensis var. sinensis HOM05D005995 ORTHO05D007362 2.2e-61 239.6 166 69.9
CSS0047754 Camellia sinensis var. sinensis HOM05D005995 ORTHO05D007362 2.2e-61 239.6 166 69.9
CiPaw.14G056700 Carya illinoinensis HOM05D005995 ORTHO05D007362 8.5e-61 237.7 166 69.3
COL.COLO4_11080 Corchorus olitorius HOM05D005995 ORTHO05D007362 1.1e-60 237.3 167 70.1
QL01p039263 Quercus lobata HOM05D005995 ORTHO05D007362 5.5e-60 235.0 159 69.8
GSVIVG01024692001 Vitis vinifera HOM05D005995 ORTHO05D007362 5.5e-60 235.0 160 71.2
Duzib170G0863 Durio zibethinus HOM05D005995 ORTHO05D007362 7.2e-60 234.6 166 68.7
Phvul.006G070800 Phaseolus vulgaris HOM05D005995 ORTHO05D007362 1.6e-59 233.4 157 71.3
FAN21G0787 Fragaria x ananassa HOM05D005995 ORTHO05D007362 2.1e-59 233.0 162 69.1
FAN25G2223 Fragaria x ananassa HOM05D005995 ORTHO05D007362 2.1e-59 233.0 162 69.1
Aqoxy4G02443 Aquilegia oxysepala HOM05D005995 ORTHO05D007362 4.7e-59 231.9 157 70.7
CiPaw.13G073700 Carya illinoinensis HOM05D005995 ORTHO05D007362 4.7e-59 231.9 160 68.8
Manes.17G003200 Manihot esculenta HOM05D005995 ORTHO05D007362 4.7e-59 231.9 160 70.6
Potri.001G279700 Populus trichocarpa HOM05D005995 ORTHO05D007362 4.7e-59 231.9 160 68.8
Haze_24375 Corylus avellana HOM05D005995 ORTHO05D007362 6.1e-59 231.5 158 71.5
VMungo0540G0986 Vigna mungo HOM05D005995 ORTHO05D007362 8.0e-59 231.1 159 71.1
Duzib168G2258 Durio zibethinus HOM05D005995 ORTHO05D007362 2.3e-58 229.6 169 66.9
FAN16G3099 Fragaria x ananassa HOM05D005995 ORTHO05D007362 6.8e-58 228.0 162 67.3
Hund06617 Selenicereus undatus HOM05D005995 ORTHO05D007362 6.8e-58 228.0 162 69.8
EL10Ac3g05994 Beta vulgaris HOM05D005995 ORTHO05D007362 8.8e-58 227.6 163 68.7
Glyma.18G060000 Glycine max HOM05D005995 ORTHO05D007362 8.8e-58 227.6 161 70.2
AUR62023851 Chenopodium quinoa HOM05D005995 ORTHO05D007362 1.2e-57 227.3 166 65.1
Nn2g14523 Nelumbo nucifera HOM05D005995 ORTHO05D007362 2.0e-57 226.5 158 70.3
Rhsim13G0066700 Rhododendron simsii HOM05D005995 ORTHO05D007362 2.0e-57 226.5 164 65.9
vmacro02942 Vaccinium macrocarpon HOM05D005995 ORTHO05D007362 2.0e-57 226.5 166 65.1
TAR131G0002 Trochodendron aralioides HOM05D005995 ORTHO05D007362 4.4e-57 225.3 155 69.7
TAR623G0738 Trochodendron aralioides HOM05D005995 ORTHO05D007362 5.7e-57 224.9 155 69.0
Sabra09G0056500 Salix brachista HOM05D005995 ORTHO05D007362 9.8e-57 224.2 158 69.0
PGR031G2980 Punica granatum HOM05D005995 ORTHO05D007362 1.3e-56 223.8 166 66.9
DCAR_015647 Daucus carota HOM05D005995 ORTHO05D007362 2.2e-56 223.0 160 71.9
Dinv09649 Davidia involucrata HOM05D002227 ORTHO05D002337 2.2e-56 223.0 132 80.3
Potri.009G074400 Populus trichocarpa HOM05D005995 ORTHO05D007362 2.2e-56 223.0 160 67.5
RcHm_v2.0_Chr5g0070551 Rosa chinensis HOM05D005995 ORTHO05D007362 2.8e-56 222.6 162 66.0
FvH4_3g39150 Fragaria vesca HOM05D005995 ORTHO05D007362 4.8e-56 221.9 162 66.0
FAN11G1452 Fragaria x ananassa HOM05D005995 ORTHO05D007362 8.3e-56 221.1 162 66.0
Cfa011735 Carpinus fangiana HOM05D005995 ORTHO05D007362 1.1e-55 220.7 158 69.0
Glyma.11G168600 Glycine max HOM05D005995 ORTHO05D007362 1.4e-55 220.3 161 68.3
Actinidia23218 Actinidia chinensis HOM05D005995 ORTHO05D007362 1.8e-55 219.9 166 65.1
arahy.Tifrunner.gnm1.ann1.SCP5PP Arachis hypogaea HOM05D005995 ORTHO05D007362 1.8e-55 219.9 163 66.9
Migut.N00147 Erythranthe guttata HOM05D005995 ORTHO05D007362 1.8e-55 219.9 164 68.3
Ciclev10029374m.g Citrus clementina HOM05D005995 ORTHO05D007362 3.1e-55 219.2 159 67.9
Lj6g0019722 Lotus japonicus HOM05D005995 ORTHO05D007362 5.4e-55 218.4 165 66.1
Peaxi162Scf00540g00015 Petunia axillaris HOM05D005995 ORTHO05D007362 5.4e-55 218.4 164 66.5
MD03G1063100 Malus domestica HOM05D005995 ORTHO05D007362 4.5e-54 215.3 166 65.7
Nitab4.5_0002043g0030 Nicotiana tabacum HOM05D005995 ORTHO05D007362 5.9e-54 214.9 168 63.1
Gohir.A13G233500 Gossypium hirsutum HOM05D005995 ORTHO05D007362 1.3e-53 213.8 134 77.6
ClCG03G000500 Citrullus lanatus HOM05D005995 ORTHO05D007362 6.5e-53 211.5 166 63.9
MELO3C020526.2 Cucumis melo HOM05D005995 ORTHO05D007362 8.5e-53 211.1 166 63.3
Ca_14969_v3 Cicer arietinum L. HOM05D005995 ORTHO05D007362 1.1e-52 210.7 166 65.1
CsaV3_1G036430 Cucumis sativus L. HOM05D005995 ORTHO05D007362 1.1e-52 210.7 166 62.7
Sed0015986 Sechium edule HOM05D005995 ORTHO05D007362 2.5e-52 209.5 165 62.4
Psat0s2070g0120 Pisum sativum HOM05D005995 ORTHO05D007362 1.6e-51 206.8 158 65.8
unitig_62.g23487 Utricularia gibba HOM05D005995 ORTHO05D007362 3.6e-51 205.7 166 66.9
AL8G34810 Arabidopsis lyrata HOM05D005995 ORTHO05D007362 4.7e-51 205.3 162 63.0
Sp6g20270 Schrenkiella parvula HOM05D005995 ORTHO05D007362 6.1e-51 204.9 164 62.8
CDE10G1344 Ceratophyllum demersum HOM05D005995 ORTHO05D007362 8.0e-51 204.5 160 63.1
arahy.Tifrunner.gnm1.ann1.6174C5 Arachis hypogaea HOM05D005995 ORTHO05D007362 1.0e-50 204.1 163 63.2
TAR633G2447 Trochodendron aralioides HOM05D005995 ORTHO05D007362 1.0e-50 204.1 155 65.8
Eucgr.B02232 Eucalyptus grandis HOM05D005995 ORTHO05D007362 1.4e-50 203.8 128 75.8
AT5G58575 Arabidopsis thaliana HOM05D005995 ORTHO05D007362 1.8e-50 203.4 159 63.5
CANSAT54G2854 Cannabis sativa HOM05D005995 ORTHO05D007362 2.3e-50 203.0 155 65.8
Lalb_Chr20g0114841 Lupinus albus HOM05D005995 ORTHO05D007362 2.3e-50 203.0 157 64.3
Carub.0008s1918 Capsella rubella HOM05D005995 ORTHO05D007362 3.0e-50 202.6 164 61.6
Prupe.6G053100 Prunus persica HOM05D005995 ORTHO05D007362 4.0e-50 202.2 161 62.7
TPR.G32896 Trifolium pratense HOM05D005995 ORTHO05D007362 4.0e-50 202.2 158 66.5
Medtr3g465040 Medicago truncatula HOM05D005995 ORTHO05D007362 2.6e-49 199.5 165 60.6
Thhalv10014805m.g Eutrema salsugineum HOM05D005995 ORTHO05D007362 1.3e-48 197.2 152 64.5
Gohir.D13G239100 Gossypium hirsutum HOM05D005995 ORTHO05D007362 1.3e-48 197.2 140 69.3
Gorai.013G270000 Gossypium raimondii HOM05D005995 ORTHO05D007362 1.3e-48 197.2 140 69.3
PSO017G3188 Papaver somniferum HOM05D005995 ORTHO05D007362 2.2e-48 196.4 125 74.4
CARHR272410 Cardamine hirsuta HOM05D005995 ORTHO05D007362 3.7e-48 195.7 170 59.4
Actinidia02782 Actinidia chinensis HOM05D005995 ORTHO05D007362 4.9e-48 195.3 122 75.4
Lalb_Chr18g0051191 Lupinus albus HOM05D005995 ORTHO05D007362 6.3e-48 194.9 163 63.2
PSO170G4292 Papaver somniferum HOM05D005995 ORTHO05D007362 6.3e-48 194.9 125 73.6
THA.LOC104799390 Tarenaya hassleriana HOM05D005995 ORTHO05D007362 6.3e-48 194.9 156 62.8
CDE10G0962 Ceratophyllum demersum HOM05D005995 ORTHO05D007362 1.1e-47 194.1 160 60.0
MD11G1066600 Malus domestica HOM05D005995 ORTHO05D007362 3.1e-47 192.6 166 59.6
ATR0681G053 Amborella trichopoda HOM05D005995 ORTHO05D007362 5.4e-47 191.8 154 63.6
Sabra16G0173300 Salix brachista HOM05D005995 ORTHO05D007362 1.2e-46 190.7 189 52.9
MD11G1066800 Malus domestica HOM05D005995 ORTHO05D007362 4.5e-46 188.7 163 58.9
Sc06g0010410 Simmondsia chinensis HOM05D005995 ORTHO05D007362 3.8e-45 185.7 124 72.6
HanXRQChr11g0334701 Helianthus annuus HOM05D005995 ORTHO05D007362 5.0e-45 185.3 122 76.2
Lsat_1_v5_gn_5_173181 Lactuca sativa HOM05D005995 ORTHO05D007362 8.6e-45 184.5 122 73.0
ECA248G1932 Erigeron canadensis HOM05D005995 ORTHO05D007362 1.1e-44 184.1 125 74.4
BcaC01g06637 Brassica carinata HOM05D005995 ORTHO05D007362 1.5e-44 183.7 139 65.5
A03p12120 Brassica napus HOM05D005995 ORTHO05D007362 1.5e-44 183.7 139 65.5
BolC3t13867H Brassica oleracea HOM05D005995 ORTHO05D007362 1.5e-44 183.7 139 65.5
BraA03t10524Z Brassica rapa HOM05D005995 ORTHO05D007362 1.5e-44 183.7 139 65.5
Aa31LG11G350 Aethionema arabicum HOM05D005995 ORTHO05D007362 1.9e-44 183.3 128 71.1
BcaB01g04505 Brassica carinata HOM05D005995 ORTHO05D007362 5.6e-44 181.8 139 65.5
TWI79G0924 Tripterygium wilfordii HOM05D005995 ORTHO05D007362 2.3e-42 176.4 168 56.0
HPP92_012020 Vanilla planifolia HOM05D005995 ORTHO05D007362 4.0e-42 175.6 156 59.6
Lj1P130T21 Lonicera japonica HOM05D005995 ORTHO05D007362 1.2e-41 174.1 106 79.2
Atru.chr3.4142 Acer truncatum HOM05D005995 ORTHO05D007362 1.5e-41 173.7 216 48.1
AUR62002337 Chenopodium quinoa HOM05D005995 ORTHO05D007362 2.0e-41 173.3 125 64.8
MBI03_g03955_MAGBIO Magnolia biondii HOM05D005995 ORTHO05D007362 5.7e-41 171.8 166 56.0
BcaNung06849 Brassica carinata HOM05D002227 ORTHO05D007362 2.9e-40 169.5 139 62.6
SEGI_16655 Sequoiadendron giganteum HOM05D005995 ORTHO05D007362 4.9e-40 168.7 171 55.6
MD11G1152800 Malus domestica HOM05D005995 ORTHO05D007362 1.1e-39 167.5 113 69.0
Sed0014404 Sechium edule HOM05D005995 ORTHO05D007362 4.1e-39 165.6 160 57.5
Mapoly0008s0254 Marchantia polymorpha HOM05D005995 ORTHO05D007362 2.3e-37 159.8 130 61.5
Os05g0351500 Oryza sativa ssp. japonica HOM05D005995 ORTHO05D007362 8.0e-35 151.4 178 46.6
Gohir.A05G107700 Gossypium hirsutum HOM05D005995 ORTHO05D007362 1.4e-34 150.6 169 49.7
Pp3c7_14690 Physcomitrium patens HOM05D005995 ORTHO05D007362 1.1e-31 141.0 185 47.0
Zm00001eb286290 Zea mays HOM05D005995 ORTHO05D007362 1.4e-31 140.6 178 48.3
Gohir.D05G107900 Gossypium hirsutum HOM05D005995 ORTHO05D007362 4.1e-31 139.0 169 46.7
TWI31G1135 Tripterygium wilfordii HOM05D005995 ORTHO05D007362 5.4e-31 138.7 129 58.1
Pp3c11_11530 Physcomitrium patens HOM05D001687 ORTHO05D001608 8.1e-27 124.8 132 51.5
C03p14210 Brassica napus HOM05D005995 ORTHO05D007362 5.2e-26 122.1 105 56.2
SMO358G0374 Selaginella moellendorffii HOM05D005995 ORTHO05D007362 6.8e-26 121.7 99 59.6
AagrBONN_evm.TU.Sc2ySwM_344.2127 Anthoceros agrestis HOM05D005995 ORTHO05D007362 2.2e-24 116.7 100 60.0
BcaC01g06639 Brassica carinata HOM05D005995 ORTHO05D007362 2.9e-24 116.3 113 56.6
Gorai.009G112000 Gossypium raimondii HOM05D005995 ORTHO05D007362 1.6e-22 110.5 113 52.2
MD11G1153100 Malus domestica HOM05D005995 ORTHO05D007362 1.0e-21 107.8 80 65.0
CBR_g49952 Chara braunii HOM05D000019 ORTHO05D000002 1.1e-18 97.8 140 42.1
HPP92_013780 Vanilla planifolia HOM05D005995 ORTHO05D007362 3.4e-17 92.8 97 51.5
MD11G1071300 Malus domestica HOM05D005995 ORTHO05D007362 4.6e-14 82.4 83 51.8
Actinidia32626 Actinidia chinensis HOM05D005995 ORTHO05D007362 6.0e-14 82.0 59 67.8
Cre17.g719550 Chlamydomonas reinhardtii HOM05D005995 ORTHO05D007362 3.3e-12 76.3 165 33.9
Pp3c4_14820 Physcomitrium patens HOM05D005995 ORTHO05D311899 7.6e-09 65.1 116 37.1
MCO04G081 Micromonas commoda HOM05D005995 ORTHO05D007362 1.4e-07 60.8 122 37.7
Nn2g14856 Nelumbo nucifera HOM05D005995 ORTHO05D007362 1.9e-07 60.5 60 50.0


User provided reference genes

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