Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold36G14447 Striga asiatica HOM05D006135 ORTHO05D007533 2.6e-172 608.6 306 100.0
SGA_v2.0_scaffold308G48068 Striga asiatica HOM05D006135 ORTHO05D007533 1.3e-163 579.7 306 95.4
Migut.L01201 Erythranthe guttata HOM05D006135 ORTHO05D007533 1.3e-126 456.8 306 75.5
MSTRG.745 Avicennia marina HOM05D006135 ORTHO05D007533 4.1e-125 451.8 306 75.2
Sopen08g004100 Solanum pennellii HOM05D006135 ORTHO05D007533 7.8e-124 447.6 306 73.9
PGSC0003DMG400005786 Solanum tuberosum HOM05D006135 ORTHO05D007533 1.7e-123 446.4 306 73.9
CAN.G792.64 Capsicum annuum HOM05D006135 ORTHO05D007533 2.3e-123 446.0 306 73.2
Oeu004576.4 Olea europaea HOM05D006135 ORTHO05D007533 1.5e-122 443.4 304 73.0
Peaxi162Scf00155g00910 Petunia axillaris HOM05D006135 ORTHO05D007533 2.5e-122 442.6 304 73.4
PGR119G0479 Punica granatum HOM05D006135 ORTHO05D007533 3.3e-122 442.2 306 72.2
Rhsim08G0202600 Rhododendron simsii HOM05D006135 ORTHO05D007533 1.4e-120 436.8 306 73.2
EL10Ac6g14988 Beta vulgaris HOM05D006135 ORTHO05D007533 2.3e-120 436.0 303 70.3
SalBow2G2095 Salvia bowleyana HOM05D006135 ORTHO05D007533 3.1e-120 435.6 306 72.2
Eucgr.G02457 Eucalyptus grandis HOM05D006135 ORTHO05D007533 4.0e-120 435.3 306 71.6
Sc04g0007660 Simmondsia chinensis HOM05D006135 ORTHO05D007533 4.0e-120 435.3 306 70.6
COL.COLO4_27903 Corchorus olitorius HOM05D006135 ORTHO05D007533 1.2e-119 433.7 304 72.0
Hma1.2p1_0357F.1_g134610 Hydrangea macrophylla HOM05D006135 ORTHO05D007533 1.2e-119 433.7 306 70.9
QL03p071327 Quercus lobata HOM05D006135 ORTHO05D007533 3.4e-119 432.2 304 72.0
AUR62007931 Chenopodium quinoa HOM05D006135 ORTHO05D007533 7.5e-119 431.0 304 69.7
TAR622G1353 Trochodendron aralioides HOM05D006135 ORTHO05D007533 7.5e-119 431.0 306 71.6
Sabra10G0121200 Salix brachista HOM05D006135 ORTHO05D007533 9.8e-119 430.6 306 71.2
SalBow6G2218 Salvia bowleyana HOM05D006135 ORTHO05D007533 3.7e-118 428.7 298 71.8
AUR62013291 Chenopodium quinoa HOM05D006135 ORTHO05D007533 4.9e-118 428.3 304 69.4
Ciclev10032231m.g Citrus clementina HOM05D006135 ORTHO05D007533 4.9e-118 428.3 302 71.5
FAN12G3645 Fragaria x ananassa HOM05D006135 ORTHO05D007533 4.9e-118 428.3 306 71.2
Sed0023480 Sechium edule HOM05D006135 ORTHO05D007533 4.9e-118 428.3 304 70.7
Cc11_g12150 Coffea canephora HOM05D006135 ORTHO05D007533 8.3e-118 427.6 304 71.1
ECA246G3492 Erigeron canadensis HOM05D006135 ORTHO05D007533 8.3e-118 427.6 306 70.6
Duzib268G0538 Durio zibethinus HOM05D006135 ORTHO05D007533 1.1e-117 427.2 304 69.4
Atru.chr11.1655 Acer truncatum HOM05D006135 ORTHO05D007533 1.4e-117 426.8 302 70.2
Potri.008G094600 Populus trichocarpa HOM05D006135 ORTHO05D007533 1.4e-117 426.8 304 71.7
RcHm_v2.0_Chr4g0438561 Rosa chinensis HOM05D006135 ORTHO05D007533 1.4e-117 426.8 306 70.6
FAN07G2159 Fragaria x ananassa HOM05D006135 ORTHO05D007533 1.9e-117 426.4 306 70.9
FvH4_4g30260 Fragaria vesca HOM05D006135 ORTHO05D007533 2.4e-117 426.0 306 70.9
Glyma.07G070800 Glycine max HOM05D006135 ORTHO05D007533 2.4e-117 426.0 306 69.6
Lj6P780T42 Lonicera japonica HOM05D006135 ORTHO05D007533 3.2e-117 425.6 305 71.8
CSS0045883 Camellia sinensis var. sinensis HOM05D006135 ORTHO05D007533 4.1e-117 425.2 302 71.2
Manes.07G067750 Manihot esculenta HOM05D006135 ORTHO05D007533 4.1e-117 425.2 306 69.0
Manes.07G067800 Manihot esculenta HOM05D006135 ORTHO05D007533 4.1e-117 425.2 306 69.0
Thecc.02G333100 Theobroma cacao HOM05D006135 ORTHO05D007533 4.1e-117 425.2 304 69.7
CiPaw.06G091600 Carya illinoinensis HOM05D006135 ORTHO05D007533 5.4e-117 424.9 306 70.3
FAN17G2903 Fragaria x ananassa HOM05D006135 ORTHO05D007533 9.2e-117 424.1 306 70.6
Gohir.D02G129100 Gossypium hirsutum HOM05D006135 ORTHO05D007533 9.2e-117 424.1 304 69.7
Gorai.005G144800 Gossypium raimondii HOM05D006135 ORTHO05D007533 9.2e-117 424.1 304 69.7
Lsat_1_v5_gn_3_56041 Lactuca sativa HOM05D006135 ORTHO05D007533 9.2e-117 424.1 306 70.9
unitig_22.g6497 Utricularia gibba HOM05D006135 ORTHO05D007533 9.2e-117 424.1 306 69.6
Lalb_Chr10g0096961 Lupinus albus HOM05D006135 ORTHO05D007533 1.6e-116 423.3 306 69.3
Gohir.A03G103900 Gossypium hirsutum HOM05D006135 ORTHO05D007533 2.0e-116 422.9 304 69.4
VMungo0331G1135 Vigna mungo HOM05D006135 ORTHO05D007533 3.5e-116 422.2 306 69.0
Cpa.g.sc1.112 Carica papaya HOM05D006135 ORTHO05D007533 4.6e-116 421.8 304 69.4
FAN22G2161 Fragaria x ananassa HOM05D006135 ORTHO05D007533 1.0e-115 420.6 306 69.9
HanXRQChr12g0375331 Helianthus annuus HOM05D006135 ORTHO05D007533 3.0e-115 419.1 306 69.6
Phvul.010G098900 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 3.0e-115 419.1 306 69.0
Phvul.011G076500 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 3.0e-115 419.1 306 69.0
THA.LOC104824063 Tarenaya hassleriana HOM05D006135 ORTHO05D007533 6.6e-115 417.9 303 68.6
Lj3g0000255 Lotus japonicus HOM05D006135 ORTHO05D007533 2.5e-114 416.0 304 67.8
MELO3C011427.2 Cucumis melo HOM05D006135 ORTHO05D007533 5.6e-114 414.8 306 69.0
Prupe.1G285000 Prunus persica HOM05D006135 ORTHO05D007533 9.5e-114 414.1 302 68.9
CsaV3_6G032530 Cucumis sativus L. HOM05D006135 ORTHO05D007533 2.8e-113 412.5 306 69.0
CsaV3_6G033610 Cucumis sativus L. HOM05D006135 ORTHO05D007533 2.8e-113 412.5 306 69.0
MD16G1062500 Malus domestica HOM05D006135 ORTHO05D007533 2.8e-113 412.5 302 68.5
Aa31LG2G7130 Aethionema arabicum HOM05D006135 ORTHO05D007533 6.2e-113 411.4 304 68.1
Zm00001eb298610 Zea mays HOM05D006135 ORTHO05D007533 6.2e-113 411.4 304 67.4
TAR374G0384 Trochodendron aralioides HOM05D006135 ORTHO05D007533 1.4e-112 410.2 308 68.2
PSO170G2502 Papaver somniferum HOM05D006135 ORTHO05D007533 2.3e-112 409.5 304 66.8
CANSAT64G3010 Cannabis sativa HOM05D006135 ORTHO05D007533 6.8e-112 407.9 306 69.3
CANSAT64G1447 Cannabis sativa HOM05D006135 ORTHO05D007533 2.2e-110 402.9 306 69.3
TPR.G19440 Trifolium pratense HOM05D006135 ORTHO05D007533 2.4e-109 399.4 308 64.9
Medtr8g030830 Medicago truncatula HOM05D006135 ORTHO05D007533 3.2e-109 399.1 309 66.0
Dinv34082 Davidia involucrata HOM05D006135 ORTHO05D008017 2.7e-108 396.0 296 68.6
Medtr8g446960 Medicago truncatula HOM05D006135 ORTHO05D007533 2.7e-108 396.0 309 65.4
PSO017G0525 Papaver somniferum HOM05D006135 ORTHO05D007533 4.6e-108 395.2 304 65.1
BcaC07g41617 Brassica carinata HOM05D006135 ORTHO05D007533 1.3e-107 393.7 303 66.3
A09p62650 Brassica napus HOM05D006135 ORTHO05D007533 3.0e-107 392.5 303 66.3
Sp1g12090 Schrenkiella parvula HOM05D006135 ORTHO05D007533 3.0e-107 392.5 303 65.7
AT1G13870 Arabidopsis thaliana HOM05D006135 ORTHO05D007533 3.9e-107 392.1 303 65.3
AL1G25700 Arabidopsis lyrata HOM05D006135 ORTHO05D007533 8.6e-107 391.0 303 65.7
CARHR014240 Cardamine hirsuta HOM05D006135 ORTHO05D007533 8.6e-107 391.0 303 66.3
C08p46210 Brassica napus HOM05D006135 ORTHO05D007533 1.1e-106 390.6 303 66.0
BolC8t52170H Brassica oleracea HOM05D006135 ORTHO05D007533 1.1e-106 390.6 303 66.0
Carub.0001s1357 Capsella rubella HOM05D006135 ORTHO05D007533 1.9e-106 389.8 303 65.3
HPP92_017746 Vanilla planifolia HOM05D006135 ORTHO05D007533 1.9e-106 389.8 306 66.0
MBI03_g07691_MAGBIO Magnolia biondii HOM05D006135 ORTHO05D007533 3.3e-106 389.0 314 64.3
BcaB03g13127 Brassica carinata HOM05D006135 ORTHO05D007533 1.2e-105 387.1 303 65.3
BcaB08g34333 Brassica carinata HOM05D006135 ORTHO05D007533 1.6e-105 386.7 303 65.3
Ah.04g155380 Amaranthus hybridus HOM05D001254 ORTHO05D007533 2.1e-105 386.3 290 66.6
BraA09t41629Z Brassica rapa HOM05D006135 ORTHO05D007533 2.1e-105 386.3 303 66.0
A08p32230 Brassica napus HOM05D006135 ORTHO05D007533 3.6e-105 385.6 303 65.0
BraA08t35146Z Brassica rapa HOM05D006135 ORTHO05D007533 6.2e-105 384.8 303 64.7
Psat4g154880 Pisum sativum HOM05D006135 ORTHO05D007533 1.1e-104 384.0 309 65.7
Aa31LG1G1130 Aethionema arabicum HOM05D006135 ORTHO05D007533 4.0e-104 382.1 303 64.0
BcaC07g38705 Brassica carinata HOM05D006135 ORTHO05D007533 5.8e-103 378.3 303 64.0
C08p16350 Brassica napus HOM05D006135 ORTHO05D007533 5.8e-103 378.3 303 64.0
BolC8t49259H Brassica oleracea HOM05D006135 ORTHO05D007533 5.8e-103 378.3 303 64.0
Sabra08G0071100 Salix brachista HOM05D006135 ORTHO05D007533 7.5e-103 377.9 278 69.8
Solyc08g008250.3 Solanum lycopersicum HOM05D006135 ORTHO05D007533 2.4e-101 372.9 254 73.6
Pp3c10_170 Physcomitrium patens HOM05D006135 ORTHO05D007533 1.1e-98 364.0 305 63.6
SHI21260 Sapria himalayana HOM05D006135 ORTHO05D007533 1.2e-95 354.0 302 61.3
SMO115G0347 Selaginella moellendorffii HOM05D006135 ORTHO05D007533 1.5e-95 353.6 308 59.1
HanXRQChr13g0417131 Helianthus annuus HOM05D006135 ORTHO05D007533 9.9e-95 350.9 252 70.6
Nitab4.5_0000100g0120 Nicotiana tabacum HOM05D006135 ORTHO05D007533 1.7e-91 340.1 237 73.0
Nitab4.5_0000607g0040 Nicotiana tabacum HOM05D006135 ORTHO05D007533 5.1e-91 338.6 278 64.7
SalBow6G7020 Salvia bowleyana HOM05D006135 ORTHO05D007533 9.9e-87 324.3 228 70.2
SalBow2G1772 Salvia bowleyana HOM05D006135 ORTHO05D007533 2.2e-86 323.2 224 71.4
Mapoly0008s0061 Marchantia polymorpha HOM05D006135 ORTHO05D007533 9.3e-85 317.8 280 57.5
CDE04G1019 Ceratophyllum demersum HOM05D006135 ORTHO05D007533 1.5e-82 310.5 251 63.7
ClCG08G010310 Citrullus lanatus HOM05D006135 ORTHO05D008017 5.6e-82 308.5 241 66.0
Aqoxy6G00083 Aquilegia oxysepala HOM05D006135 ORTHO05D007533 1.8e-80 303.5 221 70.6
Duzib251G0397 Durio zibethinus HOM05D006135 ORTHO05D007533 2.4e-80 303.1 238 63.9
ATR1136G145 Amborella trichopoda HOM05D006135 ORTHO05D007533 6.4e-78 295.0 257 58.8
CBR_g32247 Chara braunii HOM05D006135 ORTHO05D007533 1.1e-77 294.3 339 49.6
Haze_11974 Corylus avellana HOM05D006135 ORTHO05D007533 1.2e-76 290.8 218 67.0
Nn3g17430 Nelumbo nucifera HOM05D006135 ORTHO05D007533 1.2e-68 264.2 304 49.3
Cre17.g711050 Chlamydomonas reinhardtii HOM05D006135 ORTHO05D007533 3.9e-59 232.6 319 43.9
vmacro19077 Vaccinium macrocarpon HOM05D006135 ORTHO05D007533 4.3e-58 229.2 176 64.8
Oeu025274.1 Olea europaea HOM05D006135 ORTHO05D007533 4.5e-47 192.6 140 70.0
Pp3c8_25320 Physcomitrium patens HOM05D006135 ORTHO05D007533 2.3e-43 180.3 163 59.5
PRCOL_00001916 Prasinoderma coloniale HOM05D006135 ORTHO05D007533 2.6e-39 166.8 343 34.7
SEGI_02005 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 3.8e-38 162.9 121 69.4
GSVIVG01012190001 Vitis vinifera HOM05D001577 ORTHO05D008017 3.2e-37 159.8 306 35.6
MCO02G221 Micromonas commoda HOM05D006135 ORTHO05D007533 1.6e-36 157.5 177 47.5
DCAR_030035 Daucus carota HOM05D006135 ORTHO05D007533 5.5e-29 132.5 91 70.3
Lsat_1_v5_gn_2_78301 Lactuca sativa HOM05D006135 ORTHO05D007533 1.2e-28 131.3 94 73.4
Os11g0312340 Oryza sativa ssp. japonica HOM05D006135 ORTHO05D007533 3.7e-25 119.8 86 72.1
Cfa026301 Carpinus fangiana HOM05D006135 ORTHO05D007533 2.7e-23 113.6 351 29.9
AagrBONN_evm.TU.Sc2ySwM_362.1915 Anthoceros agrestis HOM05D006135 ORTHO05D007533 1.7e-22 110.9 70 71.4
HPP92_017676 Vanilla planifolia HOM05D006135 ORTHO05D007533 3.8e-22 109.8 120 53.3
Dinv16720 Davidia involucrata HOM05D006135 ORTHO05D007533 8.8e-19 98.6 91 52.7
Lalb_Chr17g0339631 Lupinus albus HOM05D006135 ORTHO05D007533 2.4e-16 90.5 64 71.9
Glyma.03G009300 Glycine max HOM05D006135 ORTHO05D007533 4.2e-13 79.7 46 76.1
SEGI_31918 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 8.9e-11 72.0 63 47.6


User provided reference genes

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