Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold36G14306 Striga asiatica HOM05D006814 ORTHO05D008613 4.9e-196 687.6 340 100.0
MSTRG.24841 Avicennia marina HOM05D006814 ORTHO05D008613 5.2e-145 518.1 337 77.4
Migut.A01081 Erythranthe guttata HOM05D006814 ORTHO05D008613 1.3e-140 503.4 336 75.3
CiPaw.11G096600 Carya illinoinensis HOM05D006814 ORTHO05D008613 3.1e-137 492.3 337 74.8
CiPaw.11G097800 Carya illinoinensis HOM05D006814 ORTHO05D008613 3.1e-137 492.3 337 74.8
Oeu005300.2 Olea europaea HOM05D006814 ORTHO05D008613 8.9e-137 490.7 367 69.5
Ciclev10032236m.g Citrus clementina HOM05D006814 ORTHO05D008613 1.5e-136 490.0 337 74.5
Cfa012484 Carpinus fangiana HOM05D006814 ORTHO05D008613 4.4e-136 488.4 337 73.6
Peaxi162Scf00170g01111 Petunia axillaris HOM05D006814 ORTHO05D008613 4.4e-136 488.4 338 73.1
Aqoxy4G00304 Aquilegia oxysepala HOM05D006814 ORTHO05D008613 7.5e-136 487.6 333 71.8
MD11G1183600 Malus domestica HOM05D006814 ORTHO05D008613 2.9e-135 485.7 337 72.7
Cc08_g03190 Coffea canephora HOM05D006814 ORTHO05D008613 3.7e-135 485.3 335 73.1
Hma1.2p1_0586F.1_g183880 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 4.9e-135 485.0 335 74.0
FAN18G2202 Fragaria x ananassa HOM05D006814 ORTHO05D008613 1.1e-134 483.8 337 70.9
FAN04G0609 Fragaria x ananassa HOM05D006814 ORTHO05D008613 1.9e-134 483.0 337 70.9
FAN08G0276 Fragaria x ananassa HOM05D006814 ORTHO05D008613 1.9e-134 483.0 337 70.9
FvH4_5g22650 Fragaria vesca HOM05D006814 ORTHO05D008613 2.4e-134 482.6 337 70.6
PGSC0003DMG400014801 Solanum tuberosum HOM05D006814 ORTHO05D008613 2.4e-134 482.6 338 72.5
RcHm_v2.0_Chr7g0211071 Rosa chinensis HOM05D006814 ORTHO05D008613 3.2e-134 482.3 336 70.8
Lsat_1_v5_gn_3_19041 Lactuca sativa HOM05D006814 ORTHO05D008613 4.1e-134 481.9 338 71.6
FAN18G0582 Fragaria x ananassa HOM05D006814 ORTHO05D008613 5.4e-134 481.5 337 70.6
TAR629G1931 Trochodendron aralioides HOM05D006814 ORTHO05D008613 9.2e-134 480.7 338 72.2
Sabra01G0108000 Salix brachista HOM05D006814 ORTHO05D008613 2.7e-133 479.2 335 72.8
Atru.chr6.1626 Acer truncatum HOM05D006814 ORTHO05D008613 3.5e-133 478.8 337 73.0
Solyc08g076610.4 Solanum lycopersicum HOM05D006814 ORTHO05D008613 3.5e-133 478.8 338 71.9
Thecc.03G307100 Theobroma cacao HOM05D006814 ORTHO05D008613 3.5e-133 478.8 337 72.1
Nitab4.5_0000685g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 4.6e-133 478.4 337 72.7
Duzib205G0392 Durio zibethinus HOM05D006814 ORTHO05D008613 6.0e-133 478.0 333 73.0
GSVIVG01013112001 Vitis vinifera HOM05D006814 ORTHO05D008613 6.0e-133 478.0 325 74.5
CAN.G298.54 Capsicum annuum HOM05D006814 ORTHO05D008613 1.0e-132 477.2 336 72.6
Nn1g02991 Nelumbo nucifera HOM05D006814 ORTHO05D008613 1.0e-132 477.2 335 72.2
Potri.001G139100 Populus trichocarpa HOM05D006814 ORTHO05D008613 1.3e-132 476.9 337 72.4
Rhsim11G0018900 Rhododendron simsii HOM05D006814 ORTHO05D008613 1.3e-132 476.9 335 73.1
Gohir.A08G154800 Gossypium hirsutum HOM05D006814 ORTHO05D008613 2.3e-132 476.1 336 71.4
Sopen08g025160 Solanum pennellii HOM05D006814 ORTHO05D008613 2.3e-132 476.1 338 71.6
Lj8A305G45 Lonicera japonica HOM05D006814 ORTHO05D008613 5.0e-132 474.9 339 72.9
CSS0047525 Camellia sinensis var. sinensis HOM05D006814 ORTHO05D008613 8.6e-132 474.2 336 72.3
Actinidia03355 Actinidia chinensis HOM05D006814 ORTHO05D008613 1.1e-131 473.8 336 72.0
Gohir.D08G175300 Gossypium hirsutum HOM05D006814 ORTHO05D008613 1.9e-131 473.0 336 71.1
Cpa.g.sc87.105 Carica papaya HOM05D006814 ORTHO05D008613 2.5e-131 472.6 326 73.0
CANSAT21G0682 Cannabis sativa HOM05D006814 ORTHO05D008613 3.3e-131 472.2 338 70.1
MELO3C008839.2 Cucumis melo HOM05D006814 ORTHO05D008613 7.3e-131 471.1 340 69.4
Gorai.004G183200 Gossypium raimondii HOM05D006814 ORTHO05D008613 7.3e-131 471.1 336 71.1
AUR62007326 Chenopodium quinoa HOM05D006814 ORTHO05D008613 1.2e-130 470.3 329 71.1
PGR031G2224 Punica granatum HOM05D006814 ORTHO05D008613 1.2e-130 470.3 340 70.0
Hund14354 Selenicereus undatus HOM05D006814 ORTHO05D008613 2.1e-130 469.5 338 70.1
vmacro00308 Vaccinium macrocarpon HOM05D006814 ORTHO05D008613 2.1e-130 469.5 335 70.4
DCAR_032083 Daucus carota HOM05D006814 ORTHO05D008613 2.8e-130 469.2 333 71.5
Manes.02G107600 Manihot esculenta HOM05D006814 ORTHO05D008613 1.1e-129 467.2 336 71.7
CsaV3_4G012030 Cucumis sativus L. HOM05D006814 ORTHO05D008613 1.8e-129 466.5 340 68.5
Sc07g0008590 Simmondsia chinensis HOM05D006814 ORTHO05D008613 3.1e-129 465.7 338 70.7
HanXRQChr17g0538231 Helianthus annuus HOM05D006814 ORTHO05D008613 4.0e-129 465.3 336 70.2
PSO063G6077 Papaver somniferum HOM05D006814 ORTHO05D008613 8.9e-129 464.2 334 67.7
HanXRQChr17g0538211 Helianthus annuus HOM05D006814 ORTHO05D008613 2.0e-128 463.0 336 69.9
TWI60G0232 Tripterygium wilfordii HOM05D006814 ORTHO05D008613 2.0e-128 463.0 335 71.3
QL12p004459 Quercus lobata HOM05D006814 ORTHO05D008613 7.5e-128 461.1 353 70.5
ECA246G4850 Erigeron canadensis HOM05D006814 ORTHO05D008613 9.8e-128 460.7 351 67.0
ClCG04G005520 Citrullus lanatus HOM05D006814 ORTHO05D008613 1.7e-127 459.9 357 66.7
Lj3g0020867 Lotus japonicus HOM05D006814 ORTHO05D008613 5.4e-126 454.9 337 68.0
THA.LOC104798334 Tarenaya hassleriana HOM05D006814 ORTHO05D008613 9.2e-126 454.1 337 68.5
COL.COLO4_16971 Corchorus olitorius HOM05D006814 ORTHO05D008613 2.3e-124 449.5 312 72.1
Aa31LG6G500 Aethionema arabicum HOM05D006814 ORTHO05D008613 1.1e-123 447.2 333 68.2
AL7G36810 Arabidopsis lyrata HOM05D006814 ORTHO05D008613 1.1e-123 447.2 337 66.5
Thhalv10025847m.g Eutrema salsugineum HOM05D006814 ORTHO05D008613 3.3e-123 445.7 337 67.4
Medtr8g447310 Medicago truncatula HOM05D006814 ORTHO05D008613 3.3e-123 445.7 331 66.8
Carub.0007s2360 Capsella rubella HOM05D006814 ORTHO05D008613 7.3e-123 444.5 337 65.9
VMungo0251G2608 Vigna mungo HOM05D006814 ORTHO05D008613 1.6e-122 443.4 328 67.1
EL10Ac5g12048 Beta vulgaris HOM05D006814 ORTHO05D008613 2.1e-122 443.0 327 68.2
CARHR224480 Cardamine hirsuta HOM05D006814 ORTHO05D008613 2.1e-122 443.0 338 66.9
AUR62018677 Chenopodium quinoa HOM05D006814 ORTHO05D008613 6.2e-122 441.4 336 67.6
Prupe.4G270400 Prunus persica HOM05D006814 ORTHO05D008613 1.8e-121 439.9 295 74.6
TPR.G8183 Trifolium pratense HOM05D006814 ORTHO05D008613 1.8e-121 439.9 328 66.2
BcaNung04035 Brassica carinata HOM05D006814 ORTHO05D008613 2.3e-121 439.5 333 67.6
A03p50690 Brassica napus HOM05D006814 ORTHO05D008613 2.3e-121 439.5 333 67.6
Psat4g131760 Pisum sativum HOM05D006814 ORTHO05D008613 5.2e-121 438.3 328 65.2
BraA03t14161Z Brassica rapa HOM05D006814 ORTHO05D008613 6.8e-121 438.0 333 67.3
BcaC06g33591 Brassica carinata HOM05D006814 ORTHO05D008613 1.2e-120 437.2 333 67.3
BolC7t45420H Brassica oleracea HOM05D006814 ORTHO05D008613 1.2e-120 437.2 333 67.3
Ca_26271_v3 Cicer arietinum L. HOM05D006814 ORTHO05D008613 1.2e-120 437.2 328 65.5
arahy.Tifrunner.gnm1.ann1.DD0PLV Arachis hypogaea HOM05D006814 ORTHO05D008613 1.5e-120 436.8 334 65.3
CDE11G0551 Ceratophyllum demersum HOM05D006814 ORTHO05D008613 9.9e-120 434.1 334 64.7
Sp7g16350 Schrenkiella parvula HOM05D006814 ORTHO05D008613 2.2e-119 433.0 337 65.9
arahy.Tifrunner.gnm1.ann1.S7AV19 Arachis hypogaea HOM05D006814 ORTHO05D008613 4.9e-119 431.8 329 65.0
Glyma.20G095300 Glycine max HOM05D006814 ORTHO05D008613 6.4e-119 431.4 332 66.3
Aa31LG9G8590 Aethionema arabicum HOM05D006814 ORTHO05D008613 1.2e-117 427.2 337 65.3
C07p49120 Brassica napus HOM05D006814 ORTHO05D008613 1.7e-116 423.3 358 62.6
Lalb_Chr05g0228761 Lupinus albus HOM05D006814 ORTHO05D008613 8.6e-116 421.0 326 63.5
HPP92_020943 Vanilla planifolia HOM05D003640 ORTHO05D008613 1.9e-115 419.9 337 64.7
Os06g0132600 Oryza sativa ssp. japonica HOM05D006814 ORTHO05D008613 4.3e-115 418.7 298 68.8
Zm00001eb269700 Zea mays HOM05D006814 ORTHO05D008613 2.1e-114 416.4 336 63.1
ATR0772G225 Amborella trichopoda HOM05D006814 ORTHO05D008613 2.4e-113 412.9 328 64.0
Haze_08181 Corylus avellana HOM05D006814 ORTHO05D008613 1.2e-109 400.6 335 63.6
SEGI_31198 Sequoiadendron giganteum HOM05D006814 ORTHO05D008613 2.6e-104 382.9 331 61.6
Sed0016076 Sechium edule HOM05D006814 ORTHO05D008613 3.8e-95 352.4 252 69.8
Pp3c10_20230 Physcomitrium patens HOM05D006814 ORTHO05D008613 3.5e-93 345.9 330 54.2
AagrBONN_evm.TU.Sc2ySwM_228.215 Anthoceros agrestis HOM05D006814 ORTHO05D008613 3.1e-89 332.8 336 52.1
Dinv28983 Davidia involucrata HOM05D006814 ORTHO05D008613 3.1e-89 332.8 219 75.8
Mapoly0097s0033 Marchantia polymorpha HOM05D006814 ORTHO05D008613 6.9e-89 331.6 335 54.6
Eucgr.D02215 Eucalyptus grandis HOM05D006814 ORTHO05D008613 4.9e-87 325.5 219 71.7
SMO358G0599 Selaginella moellendorffii HOM05D006814 ORTHO05D008613 7.1e-86 321.6 322 52.8
Phvul.003G283200 Phaseolus vulgaris HOM05D006814 ORTHO05D008613 1.1e-81 307.8 219 68.5
Nitab4.5_0025014g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 4.2e-70 269.2 161 82.0
AT4G17760 Arabidopsis thaliana HOM05D006814 ORTHO05D008613 4.6e-69 265.8 222 62.2
CBR_g3124 Chara braunii HOM05D006814 ORTHO05D008613 9.7e-67 258.1 287 48.8
SalBow6G3153 Salvia bowleyana HOM05D006814 ORTHO05D008613 6.1e-61 238.8 159 74.2
GSVIVG01003310001 Vitis vinifera HOM05D006814 ORTHO05D008613 1.4e-52 211.1 177 61.6
DCAR_021700 Daucus carota HOM05D006814 ORTHO05D013862 5.7e-51 205.7 160 66.2
Hma1.2p1_0572F.1_g181150 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 7.7e-48 195.3 159 66.0
CAN.G298.50 Capsicum annuum HOM05D006814 ORTHO05D008613 3.0e-36 156.8 126 66.7
CAN.G298.53 Capsicum annuum HOM05D006814 ORTHO05D008613 4.0e-36 156.4 108 72.2
CAN.G2435.1 Capsicum annuum HOM05D006814 ORTHO05D008613 8.9e-28 128.6 90 73.3
Actinidia25984 Actinidia chinensis HOM05D006814 ORTHO05D008613 1.3e-26 124.8 84 75.0
Hma1.2p1_0586F.1_g183890 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 1.3e-26 124.8 119 58.8
Actinidia25985 Actinidia chinensis HOM05D006814 ORTHO05D008613 1.2e-21 108.2 75 72.0
Glyma.10G145666 Glycine max HOM05D006814 ORTHO05D008613 2.1e-21 107.5 91 61.5
Cre03.g162250 Chlamydomonas reinhardtii HOM05D006814 ORTHO05D008613 3.1e-20 103.6 345 25.2
MCO03G144 Micromonas commoda HOM05D006814 ORTHO05D008613 5.8e-19 99.4 331 26.3
PRCOL_00006064 Prasinoderma coloniale HOM05D006814 ORTHO05D008613 3.7e-18 96.7 229 29.3
EL10As1g23070 Beta vulgaris HOM05D006814 ORTHO05D088401 2.3e-12 77.4 41 85.4


User provided reference genes

Program Settings