Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold36G14289 Striga asiatica HOM05D005190 ORTHO05D006183 2.0e-71 272.3 136 100.0
MSTRG.12184 Avicennia marina HOM05D005190 ORTHO05D006183 1.1e-64 250.0 136 89.0
SGA_v2.0_scaffold198G41066 Striga asiatica HOM05D005190 ORTHO05D006183 3.8e-62 241.5 136 86.0
Oeu009981.1 Olea europaea HOM05D005190 ORTHO05D006183 2.7e-60 235.3 136 85.3
SalBow4G3050 Salvia bowleyana HOM05D005190 ORTHO05D006183 8.7e-59 230.3 136 80.9
Cc07_g19070 Coffea canephora HOM05D005190 ORTHO05D006183 1.8e-56 222.6 136 78.7
Migut.N00575 Erythranthe guttata HOM05D005190 ORTHO05D006183 2.4e-56 222.2 143 79.0
Dinv09552 Davidia involucrata HOM05D005190 ORTHO05D006183 4.4e-55 218.0 139 76.3
Dinv10386 Davidia involucrata HOM05D005190 ORTHO05D006183 4.4e-55 218.0 139 76.3
Cfa006455 Carpinus fangiana HOM05D005190 ORTHO05D006183 9.9e-55 216.9 133 78.9
Sabra15G0031200 Salix brachista HOM05D005190 ORTHO05D006183 1.3e-54 216.5 136 78.7
TWI38G0007 Tripterygium wilfordii HOM05D005190 ORTHO05D006183 1.3e-54 216.5 136 77.9
Potri.015G036700 Populus trichocarpa HOM05D005190 ORTHO05D006183 2.2e-54 215.7 136 79.4
Potri.012G045500 Populus trichocarpa HOM05D005190 ORTHO05D006183 2.9e-54 215.3 136 77.9
CSS0027522 Camellia sinensis var. sinensis HOM05D005190 ORTHO05D006183 3.8e-54 214.9 138 76.8
CSS0047604 Camellia sinensis var. sinensis HOM05D005190 ORTHO05D006183 3.8e-54 214.9 138 76.8
Actinidia01056 Actinidia chinensis HOM05D005190 ORTHO05D006183 8.4e-54 213.8 137 77.4
CiPaw.01G130900 Carya illinoinensis HOM05D005190 ORTHO05D006183 8.4e-54 213.8 133 77.4
Duzib235G0490 Durio zibethinus HOM05D005190 ORTHO05D006183 8.4e-54 213.8 137 78.1
Haze_00795 Corylus avellana HOM05D005582 ORTHO05D007028 2.4e-53 212.2 133 77.4
Nn3g18945 Nelumbo nucifera HOM05D005190 ORTHO05D006183 3.2e-53 211.8 136 75.7
CANSAT35G0272 Cannabis sativa HOM05D005190 ORTHO05D006183 4.2e-53 211.5 136 75.7
GSVIVG01017663001 Vitis vinifera HOM05D005190 ORTHO05D006183 4.2e-53 211.5 136 74.3
Thecc.06G136600 Theobroma cacao HOM05D005190 ORTHO05D006183 7.1e-53 210.7 136 75.7
GSVIVG01017602001 Vitis vinifera HOM05D005190 ORTHO05D006183 9.3e-53 210.3 136 74.3
Rhsim04G0247000 Rhododendron simsii HOM05D005190 ORTHO05D006183 1.2e-52 209.9 138 75.4
Ca_02362_v3 Cicer arietinum L. HOM05D005190 ORTHO05D006183 1.6e-52 209.5 137 75.9
Manes.17G016100 Manihot esculenta HOM05D005190 ORTHO05D006183 2.1e-52 209.1 136 75.7
Phvul.004G071200 Phaseolus vulgaris HOM05D005190 ORTHO05D006183 2.1e-52 209.1 134 77.6
QL06p013825 Quercus lobata HOM05D005190 ORTHO05D006183 2.1e-52 209.1 135 74.1
MELO3C006747.2 Cucumis melo HOM05D005190 ORTHO05D006183 2.7e-52 208.8 136 76.5
Sed0026997 Sechium edule HOM05D005190 ORTHO05D006183 2.7e-52 208.8 136 74.3
arahy.Tifrunner.gnm1.ann1.JER3JH Arachis hypogaea HOM05D005190 ORTHO05D006183 3.5e-52 208.4 138 74.6
CsaV3_3G015480 Cucumis sativus L. HOM05D005190 ORTHO05D006183 3.5e-52 208.4 136 75.7
Glyma.02G064900 Glycine max HOM05D005190 ORTHO05D006183 3.5e-52 208.4 134 76.9
TPR.G12566 Trifolium pratense HOM05D005190 ORTHO05D006183 3.5e-52 208.4 139 74.8
Hma1.2p1_0013F.1_g007820 Hydrangea macrophylla HOM05D005190 ORTHO05D006183 6.0e-52 207.6 137 77.4
CsaV3_4G025830 Cucumis sativus L. HOM05D005190 ORTHO05D006183 7.8e-52 207.2 136 73.5
FAN07G0799 Fragaria x ananassa HOM05D005190 ORTHO05D006183 7.8e-52 207.2 136 75.0
DCAR_006510 Daucus carota HOM05D005190 ORTHO05D006183 1.0e-51 206.8 136 72.1
Ciclev10006189m.g Citrus clementina HOM05D005190 ORTHO05D006183 1.3e-51 206.5 137 75.2
arahy.Tifrunner.gnm1.ann1.CG6LTA Arachis hypogaea HOM05D005190 ORTHO05D006183 1.7e-51 206.1 138 74.6
Gohir.A06G195300 Gossypium hirsutum HOM05D005190 ORTHO05D006183 1.7e-51 206.1 138 74.6
Lalb_Chr07g0181821 Lupinus albus HOM05D005190 ORTHO05D006183 2.3e-51 205.7 137 73.7
HPP92_019515 Vanilla planifolia HOM05D005190 ORTHO05D006183 2.3e-51 205.7 137 75.2
PGR044G0309 Punica granatum HOM05D005190 ORTHO05D006183 3.0e-51 205.3 137 75.9
RcHm_v2.0_Chr4g0426821 Rosa chinensis HOM05D005190 ORTHO05D006183 3.0e-51 205.3 136 75.0
Sabra12G0031600 Salix brachista HOM05D005190 ORTHO05D006183 3.0e-51 205.3 136 75.7
PGSC0003DMG400012133 Solanum tuberosum HOM05D005190 ORTHO05D006183 3.0e-51 205.3 136 73.5
COL.COLO4_30940 Corchorus olitorius HOM05D005190 ORTHO05D006183 3.9e-51 204.9 147 72.1
FAN17G1108 Fragaria x ananassa HOM05D000385 ORTHO05D006183 3.9e-51 204.9 134 74.6
Glyma.16G146000 Glycine max HOM05D005190 ORTHO05D006183 3.9e-51 204.9 134 75.4
Gohir.D06G202900 Gossypium hirsutum HOM05D005190 ORTHO05D006183 5.1e-51 204.5 138 73.9
Gorai.010G236800 Gossypium raimondii HOM05D005190 ORTHO05D006183 5.1e-51 204.5 138 73.9
Lalb_Chr13g0298851 Lupinus albus HOM05D005190 ORTHO05D006183 5.1e-51 204.5 138 73.2
TPR.G22255 Trifolium pratense HOM05D005190 ORTHO05D006183 5.1e-51 204.5 138 73.2
Prupe.8G102200 Prunus persica HOM05D005190 ORTHO05D006183 6.6e-51 204.1 137 75.9
FvH4_4g21210 Fragaria vesca HOM05D005190 ORTHO05D006183 8.7e-51 203.8 136 73.5
FAN12G1005 Fragaria x ananassa HOM05D005190 ORTHO05D006183 8.7e-51 203.8 136 73.5
THA.LOC104800562 Tarenaya hassleriana HOM05D005190 ORTHO05D006183 1.5e-50 203.0 131 76.3
TAR636G2254 Trochodendron aralioides HOM05D005190 ORTHO05D006183 1.5e-50 203.0 130 76.2
Nitab4.5_0002793g0070 Nicotiana tabacum HOM05D005190 ORTHO05D006183 1.9e-50 202.6 136 73.5
Peaxi162Scf00074g00538 Petunia axillaris HOM05D005190 ORTHO05D006183 1.9e-50 202.6 137 75.2
SEGI_18361 Sequoiadendron giganteum HOM05D005190 ORTHO05D006183 1.9e-50 202.6 139 70.5
TAR629G3462 Trochodendron aralioides HOM05D005190 ORTHO05D006183 1.9e-50 202.6 138 71.0
ClCG04G007440 Citrullus lanatus HOM05D005190 ORTHO05D006183 2.5e-50 202.2 136 71.3
Duzib192G0082 Durio zibethinus HOM05D005190 ORTHO05D006183 2.5e-50 202.2 137 73.7
Phvul.004G071300 Phaseolus vulgaris HOM05D005190 ORTHO05D006183 4.3e-50 201.4 134 74.6
Cpa.g.sc146.40 Carica papaya HOM05D005190 ORTHO05D006183 5.6e-50 201.1 139 73.4
MBI19_g06603_MAGBIO Magnolia biondii HOM05D005190 ORTHO05D006183 5.6e-50 201.1 136 72.1
Sc06g0001490 Simmondsia chinensis HOM05D005190 ORTHO05D006183 7.3e-50 200.7 133 72.9
TWI63G0483 Tripterygium wilfordii HOM05D005190 ORTHO05D006183 7.3e-50 200.7 138 74.6
Nitab4.5_0002367g0140 Nicotiana tabacum HOM05D005190 ORTHO05D006183 9.6e-50 200.3 136 72.8
Lj4g0016109 Lotus japonicus HOM05D005190 ORTHO05D006183 1.3e-49 199.9 139 72.7
Medtr7g096570 Medicago truncatula HOM05D005190 ORTHO05D006183 1.6e-49 199.5 139 71.9
arahy.Tifrunner.gnm1.ann1.W6NXGM Arachis hypogaea HOM05D005190 ORTHO05D006183 2.8e-49 198.7 131 76.3
Psat0ss1196g0480 Pisum sativum HOM05D005190 ORTHO05D006183 2.8e-49 198.7 132 72.7
ATR0730G183 Amborella trichopoda HOM05D005190 ORTHO05D006183 3.6e-49 198.4 137 72.3
Solyc08g082740.4 Solanum lycopersicum HOM05D005190 ORTHO05D006183 3.6e-49 198.4 136 72.1
Sopen08g030970 Solanum pennellii HOM05D005190 ORTHO05D006183 3.6e-49 198.4 136 72.1
arahy.Tifrunner.gnm1.ann1.R3ADAS Arachis hypogaea HOM05D005190 ORTHO05D006183 4.8e-49 198.0 131 75.6
AUR62002533 Chenopodium quinoa HOM05D005190 ORTHO05D006183 4.8e-49 198.0 137 73.0
MD13G1144000 Malus domestica HOM05D005190 ORTHO05D006183 1.4e-48 196.4 137 72.3
EL10Ac3g06230 Beta vulgaris HOM05D005190 ORTHO05D006183 3.1e-48 195.3 137 72.3
AUR62023660 Chenopodium quinoa HOM05D005190 ORTHO05D006183 6.9e-48 194.1 137 71.5
CAN.G567.34 Capsicum annuum HOM05D005190 ORTHO05D006183 9.0e-48 193.7 136 71.3
Lsat_1_v5_gn_3_12780 Lactuca sativa HOM05D005190 ORTHO05D006183 3.4e-47 191.8 136 72.1
ECA246G1588 Erigeron canadensis HOM05D005190 ORTHO05D006183 9.9e-47 190.3 130 71.5
HanXRQChr06g0166421 Helianthus annuus HOM05D005190 ORTHO05D006183 2.9e-46 188.7 138 69.6
HanXRQChr17g0534691 Helianthus annuus HOM05D005190 ORTHO05D006183 1.9e-45 186.0 138 68.8
BcaC05g27594 Brassica carinata HOM05D005190 ORTHO05D006183 5.4e-45 184.5 146 64.4
A05p21200 Brassica napus HOM05D005190 ORTHO05D006183 5.4e-45 184.5 146 64.4
C05p35790 Brassica napus HOM05D005190 ORTHO05D006183 5.4e-45 184.5 146 64.4
BraA05t21026Z Brassica rapa HOM05D005190 ORTHO05D006183 5.4e-45 184.5 146 64.4
Os06g0342100 Oryza sativa ssp. japonica HOM05D005190 ORTHO05D006183 1.6e-44 183.0 130 67.7
Aa31LG10G5580 Aethionema arabicum HOM05D005190 ORTHO05D006183 3.0e-43 178.7 114 73.7
PSO782G1806 Papaver somniferum HOM05D005190 ORTHO05D006183 3.9e-43 178.3 120 72.5
BcaB04g17462 Brassica carinata HOM05D005190 ORTHO05D006183 6.7e-43 177.6 115 72.2
Lsat_1_v5_gn_6_83381 Lactuca sativa HOM05D005190 ORTHO05D006183 8.7e-43 177.2 119 70.6
Thhalv10011800m.g Eutrema salsugineum HOM05D005190 ORTHO05D006183 1.5e-42 176.4 114 72.8
AT1G48160 Arabidopsis thaliana HOM05D005190 ORTHO05D006183 3.3e-42 175.3 115 71.3
PSO478G2609 Papaver somniferum HOM05D005190 ORTHO05D006183 3.3e-42 175.3 118 72.0
Carub.0001s3725 Capsella rubella HOM05D005190 ORTHO05D006183 4.3e-42 174.9 114 71.9
Sp1g35120 Schrenkiella parvula HOM05D005190 ORTHO05D006183 4.3e-42 174.9 115 71.3
TPR.G39662 Trifolium pratense HOM05D005190 ORTHO05D006183 4.3e-42 174.9 119 74.8
AL8G32340 Arabidopsis lyrata HOM05D005190 ORTHO05D006183 5.6e-42 174.5 115 70.4
Pp3c3_17800 Physcomitrium patens HOM05D005190 ORTHO05D006183 1.3e-41 173.3 136 64.0
Zm00001eb066670 Zea mays HOM05D005190 ORTHO05D006183 1.3e-41 173.3 129 65.1
Zm00001eb081370 Zea mays HOM05D005190 ORTHO05D006183 1.3e-41 173.3 129 65.1
AL1G54730 Arabidopsis lyrata HOM05D005190 ORTHO05D006183 1.6e-41 172.9 114 70.2
Mapoly0004s0269 Marchantia polymorpha HOM05D005190 ORTHO05D006183 1.6e-41 172.9 133 64.7
BcaC07g37169 Brassica carinata HOM05D005190 ORTHO05D006183 2.8e-41 172.2 108 73.1
C08p05420 Brassica napus HOM05D005190 ORTHO05D006183 2.8e-41 172.2 108 73.1
BolC8t47359H Brassica oleracea HOM05D005190 ORTHO05D006183 2.8e-41 172.2 108 73.1
A08p05180 Brassica napus HOM05D005190 ORTHO05D006183 8.1e-41 170.6 108 72.2
BraA08t32536Z Brassica rapa HOM05D005190 ORTHO05D006183 8.1e-41 170.6 108 72.2
BolC5t32295H Brassica oleracea HOM05D005190 ORTHO05D006183 1.1e-40 170.2 125 65.6
CARHR037790 Cardamine hirsuta HOM05D005190 ORTHO05D006183 1.1e-40 170.2 108 72.2
unitig_747.g21355 Utricularia gibba HOM05D001490 ORTHO05D001450 4.5e-39 164.9 137 67.2
MD13G1143900 Malus domestica HOM05D005190 ORTHO05D006183 5.5e-37 157.9 113 72.6
Ah.07g203500 Amaranthus hybridus HOM05D005190 ORTHO05D006183 8.7e-35 150.6 93 74.2
TPR.G16114 Trifolium pratense HOM05D005190 ORTHO05D006183 8.7e-35 150.6 98 68.4
AagrBONN_evm.TU.Sc2ySwM_362.2360 Anthoceros agrestis HOM05D005190 ORTHO05D006183 1.4e-32 143.3 132 53.0
arahy.Tifrunner.gnm1.ann1.AFL9DX Arachis hypogaea HOM05D005190 ORTHO05D006183 9.0e-32 140.6 118 66.1
CBR_g39024 Chara braunii HOM05D005190 ORTHO05D006183 5.8e-31 137.9 128 57.8
BcaC08g43007 Brassica carinata HOM05D005190 ORTHO05D006183 1.0e-30 137.1 84 75.0
SMO352G0034 Selaginella moellendorffii HOM05D005190 ORTHO05D006183 1.0e-27 127.1 121 56.2
C06p02560 Brassica napus HOM05D005190 ORTHO05D006183 1.9e-26 122.9 110 57.3
MBI07_g26367_MAGBIO Magnolia biondii HOM05D005190 ORTHO05D006183 3.1e-24 115.5 126 50.8
vmacro08000 Vaccinium macrocarpon HOM05D005190 ORTHO05D006183 2.0e-23 112.8 81 75.3
Dinv29526 Davidia involucrata HOM05D005190 ORTHO05D006183 5.9e-23 111.3 72 77.8
BcaC01g01495 Brassica carinata HOM05D005190 ORTHO05D006183 1.0e-22 110.5 136 49.3
ClCG05G006830 Citrullus lanatus HOM05D005190 ORTHO05D006183 7.2e-21 104.4 59 79.7
Eucgr.G02037 Eucalyptus grandis HOM05D005190 ORTHO05D006183 1.6e-20 103.2 72 65.3
MCO01G268 Micromonas commoda HOM05D005190 ORTHO05D006183 5.1e-19 98.2 100 48.0
BolC6t35384H Brassica oleracea HOM05D005190 ORTHO05D006183 6.7e-19 97.8 60 71.7
Aqoxy2G01813 Aquilegia oxysepala HOM05D005190 ORTHO05D006183 8.8e-19 97.4 73 69.9
Haze_12814 Corylus avellana HOM05D000165 ORTHO05D001328 1.1e-18 97.1 74 63.5
Cre02.g095070 Chlamydomonas reinhardtii HOM05D005190 ORTHO05D006183 4.3e-18 95.1 113 43.4
CDE05G0439 Ceratophyllum demersum HOM05D005190 ORTHO05D006183 5.7e-18 94.7 76 61.8
Atru.chr4.92 Acer truncatum HOM05D005190 ORTHO05D006183 3.4e-15 85.5 61 68.9
Actinidia18502 Actinidia chinensis HOM05D006846 ORTHO05D008473 5.9e-15 84.7 92 53.3
Cfa023211 Carpinus fangiana HOM05D005190 ORTHO05D006183 2.9e-14 82.4 105 41.9
RcHm_v2.0_Chr7g0219311 Rosa chinensis HOM05D005190 ORTHO05D006183 3.2e-13 79.0 59 64.4
EL10As1g23068 Beta vulgaris HOM05D005190 ORTHO05D006183 5.5e-13 78.2 77 53.2
PRCOL_00001126 Prasinoderma coloniale HOM05D005190 ORTHO05D006183 8.8e-11 70.9 138 34.1
MD13G1001700 Malus domestica HOM05D005190 ORTHO05D006183 4.4e-10 68.6 81 45.7
MELO3C033488.2 Cucumis melo HOM05D005190 ORTHO05D006183 4.8e-09 65.1 74 52.7


User provided reference genes

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