Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold355G49769 Striga asiatica HOM05D000003 ORTHO05D011213 2.9e-176 621.7 298 100.0
SGA_v2.0_scaffold191G40503 Striga asiatica HOM05D000003 ORTHO05D000004 2.8e-38 163.3 308 32.1
SGA_v2.0_scaffold62G21514 Striga asiatica HOM05D000003 ORTHO05D000004 3.7e-14 83.2 185 27.6
SGA_v2.0_scaffold71G23744 Striga asiatica HOM05D004014 ORTHO05D005890 1.2e-12 78.2 154 30.5
SGA_v2.0_scaffold257G45726 Striga asiatica HOM05D010565 ORTHO05D011213 1.6e-12 77.8 210 29.5
SGA_v2.0_scaffold250G45022 Striga asiatica HOM05D000003 ORTHO05D000004 4.6e-12 76.3 249 24.5
SGA_v2.0_scaffold83G26428 Striga asiatica HOM05D000003 ORTHO05D051420 4.6e-12 76.3 199 26.6
SGA_v2.0_scaffold17G08062 Striga asiatica HOM05D000003 ORTHO05D000006 3.9e-11 73.2 210 22.4
SGA_v2.0_scaffold17G08173 Striga asiatica HOM05D000003 ORTHO05D000004 1.6e-09 67.8 114 26.3
SGA_v2.0_scaffold4G02180 Striga asiatica HOM05D000688 ORTHO05D004737 1.6e-09 67.8 117 27.4
SGA_v2.0_scaffold151G36755 Striga asiatica HOM05D000003 ORTHO05D000004 2.1e-09 67.4 58 37.9
SGA_v2.0_scaffold5G02882 Striga asiatica HOM05D001043 ORTHO05D001555 3.1e-08 63.5 183 23.0
SGA_v2.0_scaffold139G35388 Striga asiatica HOM05D028223 ORTHO05D051408 5.2e-08 62.8 60 41.7
SGA_v2.0_scaffold380G50369 Striga asiatica HOM05D010565 ORTHO05D011213 6.8e-08 62.4 57 35.1
SGA_v2.0_scaffold14G07070 Striga asiatica HOM05D000003 ORTHO05D000004 8.9e-08 62.0 59 35.6
SGA_v2.0_scaffold127G33968 Striga asiatica HOM05D009140 ORTHO05D000004 2.6e-07 60.5 47 48.9
EL10Ac6g14227 Beta vulgaris HOM05D000003 ORTHO05D000004 4.4e-07 59.7 228 22.8
Cc01_g07280 Coffea canephora HOM05D000003 ORTHO05D000004 5.8e-07 59.3 71 38.0
Lj3C1061G3 Lonicera japonica HOM05D000434 ORTHO05D001445 5.8e-07 59.3 132 26.5
SGA_v2.0_scaffold1G00790 Striga asiatica HOM05D010565 ORTHO05D011213 1.3e-06 58.2 63 33.3
SGA_v2.0_scaffold335G49110 Striga asiatica HOM05D001364 ORTHO05D001316 1.7e-06 57.8 95 28.4
Cc11_g12030 Coffea canephora HOM05D000003 ORTHO05D000004 2.9e-06 57.0 102 24.5
QL02p033589 Quercus lobata HOM05D000003 ORTHO05D010741 8.4e-06 55.5 67 31.3


User provided reference genes

Program Settings