Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold347G49550 Striga asiatica HOM05D006187 ORTHO05D007621 1.3e-148 529.6 259 100.0
MSTRG.26280 Avicennia marina HOM05D006187 ORTHO05D007621 3.0e-100 369.0 209 85.2
Migut.K00331 Erythranthe guttata HOM05D006187 ORTHO05D007621 9.5e-99 364.0 208 83.2
Oeu005532.1 Olea europaea HOM05D006187 ORTHO05D007621 1.2e-98 363.6 209 82.3
DCAR_022562 Daucus carota HOM05D006187 ORTHO05D007621 4.7e-98 361.7 209 80.4
Cc05_g13690 Coffea canephora HOM05D006187 ORTHO05D007621 1.1e-97 360.5 209 81.8
Dinv22262 Davidia involucrata HOM05D006187 ORTHO05D007621 1.1e-97 360.5 216 78.7
Nn1g03532 Nelumbo nucifera HOM05D006187 ORTHO05D007621 1.4e-97 360.1 209 81.8
Psat2g010920 Pisum sativum HOM05D006187 ORTHO05D007621 1.4e-97 360.1 207 81.2
COL.COLO4_09662 Corchorus olitorius HOM05D006187 ORTHO05D007621 3.1e-97 359.0 209 81.8
THA.LOC104816937 Tarenaya hassleriana HOM05D006187 ORTHO05D007621 3.1e-97 359.0 209 81.3
RcHm_v2.0_Chr5g0039431 Rosa chinensis HOM05D006187 ORTHO05D007621 4.0e-97 358.6 208 81.2
Solyc07g064590.3 Solanum lycopersicum HOM05D006187 ORTHO05D007621 4.0e-97 358.6 209 81.3
LjContig00272g0005891 Lotus japonicus HOM05D006187 ORTHO05D007621 8.9e-97 357.5 209 80.9
unitig_746.g26546 Utricularia gibba HOM05D006187 ORTHO05D007621 8.9e-97 357.5 209 81.3
CAN.G337.132 Capsicum annuum HOM05D006187 ORTHO05D007621 1.2e-96 357.1 209 80.9
PGSC0003DMG400022319 Solanum tuberosum HOM05D006187 ORTHO05D007621 1.2e-96 357.1 209 80.4
TPR.G1184 Trifolium pratense HOM05D006187 ORTHO05D007621 1.5e-96 356.7 209 80.4
ECA246G0646 Erigeron canadensis HOM05D006187 ORTHO05D007621 2.0e-96 356.3 209 80.9
Peaxi162Scf00964g00021 Petunia axillaris HOM05D006187 ORTHO05D007621 5.8e-96 354.8 209 80.4
RhsimUnG0250600 Rhododendron simsii HOM05D006187 ORTHO05D007621 5.8e-96 354.8 209 79.9
Thecc.07G036900 Theobroma cacao HOM05D006187 ORTHO05D007621 5.8e-96 354.8 209 81.8
SalBow5G2755 Salvia bowleyana HOM05D006187 ORTHO05D007621 7.6e-96 354.4 225 78.7
FvH4_3g22670 Fragaria vesca HOM05D006187 ORTHO05D007621 9.9e-96 354.0 208 80.8
MD11G1218600 Malus domestica HOM05D006187 ORTHO05D007621 9.9e-96 354.0 208 80.8
Sopen07g032780 Solanum pennellii HOM05D006187 ORTHO05D007621 9.9e-96 354.0 209 79.9
arahy.Tifrunner.gnm1.ann1.KHU2SV Arachis hypogaea HOM05D006187 ORTHO05D007621 1.3e-95 353.6 213 79.3
arahy.Tifrunner.gnm1.ann1.YIAG1Z Arachis hypogaea HOM05D006187 ORTHO05D007621 1.3e-95 353.6 213 79.3
Gohir.D01G066500 Gossypium hirsutum HOM05D006187 ORTHO05D007621 1.3e-95 353.6 209 80.4
Ciclev10009486m.g Citrus clementina HOM05D006187 ORTHO05D007621 1.7e-95 353.2 209 78.9
AUR62020447 Chenopodium quinoa HOM05D006187 ORTHO05D007621 2.9e-95 352.4 209 80.4
Lalb_Chr10g0106971 Lupinus albus HOM05D006187 ORTHO05D007621 2.9e-95 352.4 209 78.9
Ca_06320_v3 Cicer arietinum L. HOM05D006187 ORTHO05D007621 3.8e-95 352.1 209 80.4
Ca_30809_v3 Cicer arietinum L. HOM05D006187 ORTHO05D007621 3.8e-95 352.1 209 80.4
Dinv40753 Davidia involucrata HOM05D006187 ORTHO05D007621 4.9e-95 351.7 205 81.5
Gorai.002G088500 Gossypium raimondii HOM05D006187 ORTHO05D007621 4.9e-95 351.7 209 79.9
Manes.15G071900 Manihot esculenta HOM05D006187 ORTHO05D007621 6.4e-95 351.3 209 80.9
HPP92_016292 Vanilla planifolia HOM05D006187 ORTHO05D007621 8.4e-95 350.9 208 79.3
Potri.001G435500 Populus trichocarpa HOM05D006187 ORTHO05D007621 1.4e-94 350.1 209 78.5
PGR083G2749 Punica granatum HOM05D006187 ORTHO05D007621 1.4e-94 350.1 209 79.9
Sed0017183 Sechium edule HOM05D006187 ORTHO05D007621 1.4e-94 350.1 209 78.0
TAR626G1058 Trochodendron aralioides HOM05D006187 ORTHO05D007621 1.4e-94 350.1 209 79.4
Prupe.4G212700 Prunus persica HOM05D006187 ORTHO05D007621 1.9e-94 349.7 208 79.3
Phvul.008G266900 Phaseolus vulgaris HOM05D006187 ORTHO05D007621 2.4e-94 349.4 209 79.4
VMungo0647G0583 Vigna mungo HOM05D006187 ORTHO05D007621 2.4e-94 349.4 209 78.9
Gohir.A01G079500 Gossypium hirsutum HOM05D006187 ORTHO05D007621 5.4e-94 348.2 209 78.9
Duzib170G0579 Durio zibethinus HOM05D006187 ORTHO05D007621 7.1e-94 347.8 206 81.1
AT1G50670 Arabidopsis thaliana HOM05D006187 ORTHO05D007621 9.2e-94 347.4 209 77.5
Aa31LG10G3660 Aethionema arabicum HOM05D006187 ORTHO05D007621 1.2e-93 347.1 209 78.0
Ah.06g186030 Amaranthus hybridus HOM05D006187 ORTHO05D007621 1.2e-93 347.1 209 76.6
TWI39G1048 Tripterygium wilfordii HOM05D006187 ORTHO05D007621 1.6e-93 346.7 209 77.5
CARHR040720 Cardamine hirsuta HOM05D006187 ORTHO05D007621 2.1e-93 346.3 209 77.5
CSS0042680 Camellia sinensis var. sinensis HOM05D006187 ORTHO05D007621 2.7e-93 345.9 209 78.5
CSS0049447 Camellia sinensis var. sinensis HOM05D006187 ORTHO05D007621 2.7e-93 345.9 207 78.7
AUR62015764 Chenopodium quinoa HOM05D006187 ORTHO05D007621 2.7e-93 345.9 209 78.5
Haze_09689 Corylus avellana HOM05D006187 ORTHO05D007621 7.8e-93 344.4 209 78.5
CiPaw.11G189300 Carya illinoinensis HOM05D006187 ORTHO05D007621 1.0e-92 344.0 208 79.8
CANSAT11G0252 Cannabis sativa HOM05D006187 ORTHO05D007621 1.3e-92 343.6 209 78.5
CsaV3_7G021800 Cucumis sativus L. HOM05D006187 ORTHO05D007621 1.3e-92 343.6 209 77.0
FAN16G3112 Fragaria x ananassa HOM05D006187 ORTHO05D007621 1.3e-92 343.6 220 76.4
AL1G58340 Arabidopsis lyrata HOM05D006187 ORTHO05D007621 1.7e-92 343.2 209 76.6
GSVIVG01037647001 Vitis vinifera HOM05D006187 ORTHO05D007621 1.7e-92 343.2 209 77.0
Potri.011G139500 Populus trichocarpa HOM05D006187 ORTHO05D007621 3.0e-92 342.4 209 78.0
Zm00001eb207490 Zea mays HOM05D006187 ORTHO05D007621 3.0e-92 342.4 207 78.7
Aqoxy1G03401 Aquilegia oxysepala HOM05D006187 ORTHO05D007621 6.6e-92 341.3 209 77.5
BcaB07g33507 Brassica carinata HOM05D006187 ORTHO05D007621 6.6e-92 341.3 209 76.6
PSO210G0259 Papaver somniferum HOM05D006187 ORTHO05D007621 6.6e-92 341.3 209 75.6
Cfa020345 Carpinus fangiana HOM05D006187 ORTHO05D007621 8.7e-92 340.9 209 77.0
A06p02950 Brassica napus HOM05D006187 ORTHO05D007621 1.1e-91 340.5 209 75.6
BcaC08g43245 Brassica carinata HOM05D006187 ORTHO05D007621 2.5e-91 339.3 209 76.1
C06p05930 Brassica napus HOM05D006187 ORTHO05D007621 2.5e-91 339.3 209 76.1
Eucgr.F00764 Eucalyptus grandis HOM05D006187 ORTHO05D007621 2.5e-91 339.3 209 77.0
Carub.0001s3971 Capsella rubella HOM05D006187 ORTHO05D007621 5.6e-91 338.2 209 76.1
PSO832G1277 Papaver somniferum HOM05D006187 ORTHO05D007621 5.6e-91 338.2 209 74.6
Sp1g37520 Schrenkiella parvula HOM05D006187 ORTHO05D007621 7.3e-91 337.8 209 75.6
FAN11G0395 Fragaria x ananassa HOM05D006187 ORTHO05D007621 9.6e-91 337.4 229 73.4
CiPaw.12G129700 Carya illinoinensis HOM05D006187 ORTHO05D007621 1.6e-90 336.7 208 76.9
Sc16g0006050 Simmondsia chinensis HOM05D006187 ORTHO05D007621 1.6e-90 336.7 209 76.1
Thhalv10011780m.g Eutrema salsugineum HOM05D006187 ORTHO05D007621 2.1e-90 336.3 209 75.6
FAN25G1478 Fragaria x ananassa HOM05D006187 ORTHO05D007621 3.6e-90 335.5 229 72.9
ATR0794G016 Amborella trichopoda HOM05D006187 ORTHO05D007621 6.2e-90 334.7 206 75.2
BraA06t23501Z Brassica rapa HOM05D006187 ORTHO05D007621 8.1e-90 334.3 210 75.2
EL10Ac4g07806 Beta vulgaris HOM05D006187 ORTHO05D007621 1.4e-89 333.6 209 75.6
FAN21G2137 Fragaria x ananassa HOM05D006187 ORTHO05D007621 2.4e-89 332.8 239 70.3
Oeu062696.2 Olea europaea HOM05D006187 ORTHO05D007621 9.0e-89 330.9 243 67.9
CDE05G0514 Ceratophyllum demersum HOM05D006187 ORTHO05D007621 2.2e-87 326.2 205 74.6
HanXRQChr08g0233871 Helianthus annuus HOM05D006187 ORTHO05D007621 1.4e-86 323.6 187 81.3
Lalb_Chr17g0348481 Lupinus albus HOM05D006187 ORTHO05D007621 1.9e-86 323.2 190 81.1
HanXRQChr05g0159371 Helianthus annuus HOM05D006187 ORTHO05D007621 3.2e-86 322.4 187 81.8
SMO201G0052 Selaginella moellendorffii HOM05D006187 ORTHO05D007621 5.4e-86 321.6 206 71.4
Medtr5g092720 Medicago truncatula HOM05D006187 ORTHO05D007621 2.1e-85 319.7 190 78.4
Mapoly0105s0022 Marchantia polymorpha HOM05D006187 ORTHO05D007621 4.6e-85 318.5 207 72.9
SEGI_20110 Sequoiadendron giganteum HOM05D006187 ORTHO05D007621 1.0e-84 317.4 205 74.1
Actinidia35344 Actinidia chinensis HOM05D006187 ORTHO05D007621 2.3e-84 316.2 209 73.7
ClCG09G010800 Citrullus lanatus HOM05D006187 ORTHO05D007621 8.7e-84 314.3 211 71.6
Lsat_1_v5_gn_5_3960 Lactuca sativa HOM05D006187 ORTHO05D007621 1.5e-83 313.5 191 77.0
MELO3C013167.2 Cucumis melo HOM05D006187 ORTHO05D007621 2.5e-83 312.8 189 77.2
Glyma.02G291000 Glycine max HOM05D006187 ORTHO05D007621 4.3e-83 312.0 193 76.7
Pp3c26_11120 Physcomitrium patens HOM05D006187 ORTHO05D007621 2.8e-82 309.3 204 72.1
TWI38G1854 Tripterygium wilfordii HOM05D006187 ORTHO05D007621 2.8e-82 309.3 187 76.5
Glyma.14G023700 Glycine max HOM05D006187 ORTHO05D007621 4.8e-82 308.5 185 78.9
Sabra11G0125500 Salix brachista HOM05D006187 ORTHO05D007621 1.1e-81 307.4 288 56.6
AagrBONN_evm.TU.Sc2ySwM_344.4367 Anthoceros agrestis HOM05D004720 ORTHO05D007621 3.5e-77 292.4 205 66.3
Nitab4.5_0011129g0020 Nicotiana tabacum HOM05D006187 ORTHO05D007621 5.1e-76 288.5 207 70.0
QL08p010320 Quercus lobata HOM05D006187 ORTHO05D007621 4.5e-72 275.4 196 67.9
vmacro09715 Vaccinium macrocarpon HOM05D006187 ORTHO05D007621 4.9e-71 271.9 165 77.0
Lj1A872G52 Lonicera japonica HOM05D006187 ORTHO05D007621 1.3e-68 263.8 151 82.1
BolC6t35706H Brassica oleracea HOM05D006187 ORTHO05D007621 5.6e-67 258.5 165 73.3
SHI26611 Sapria himalayana HOM05D006187 ORTHO05D007621 2.1e-66 256.5 184 66.3
Cre09.g409050 Chlamydomonas reinhardtii HOM05D006187 ORTHO05D007621 1.4e-65 253.8 202 59.4
MCO07G461 Micromonas commoda HOM05D006187 ORTHO05D007621 5.5e-62 241.9 205 57.1
PSO675G5262 Papaver somniferum HOM05D006187 ORTHO05D007621 1.6e-61 240.4 210 56.2
CBR_g54108 Chara braunii HOM05D006187 ORTHO05D007621 6.0e-61 238.4 165 70.3
Hma1.2p1_0673F.1_g201350 Hydrangea macrophylla HOM05D006187 ORTHO05D007621 1.6e-58 230.3 209 59.3
HPP92_016312 Vanilla planifolia HOM05D006187 ORTHO05D007621 1.1e-57 227.6 135 80.0
PRCOL_00006206 Prasinoderma coloniale HOM05D006187 ORTHO05D007621 4.3e-51 205.7 203 51.2
PSO541G4439 Papaver somniferum HOM05D006187 ORTHO05D007621 2.2e-47 193.4 205 49.3
Cpa.g.sc97.3 Carica papaya HOM05D006187 ORTHO05D007621 1.2e-45 187.6 183 54.6
Haze_26155 Corylus avellana HOM05D006187 ORTHO05D007621 3.0e-36 156.4 204 36.8
Cre06.g274700 Chlamydomonas reinhardtii HOM05D006187 ORTHO05D007621 5.2e-36 155.6 170 43.5
MBI18_g14476_MAGBIO Magnolia biondii HOM05D006187 ORTHO05D007621 6.3e-34 148.7 151 55.0
Prupe.4G233700 Prunus persica HOM05D006187 ORTHO05D007621 1.3e-31 141.0 158 48.7
Nitab4.5_0001913g0160 Nicotiana tabacum HOM05D006187 ORTHO05D007621 6.5e-31 138.7 84 81.0
Os02g0164800 Oryza sativa ssp. japonica HOM05D006187 ORTHO05D007621 1.1e-30 137.9 84 78.6
PSO675G9324 Papaver somniferum HOM05D006187 ORTHO05D007621 2.7e-29 133.3 135 48.9
Cfa025770 Carpinus fangiana HOM05D006187 ORTHO05D007621 1.0e-28 131.3 242 36.0
HPP92_016311 Vanilla planifolia HOM05D006187 ORTHO05D007621 9.1e-25 118.2 74 74.3
AUR62015776 Chenopodium quinoa HOM05D006187 ORTHO05D007621 3.7e-18 96.3 76 64.5
QL08p010315 Quercus lobata HOM05D006187 ORTHO05D007621 3.8e-15 86.3 43 88.4


User provided reference genes

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