Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold33G13509 Striga asiatica HOM05D006028 ORTHO05D007784 5.1e-210 734.2 375 100.0
Migut.H00221 Erythranthe guttata HOM05D006028 ORTHO05D007784 4.5e-142 508.4 375 72.0
SalBow3G3202 Salvia bowleyana HOM05D006028 ORTHO05D007784 2.3e-138 496.1 396 68.7
MSTRG.17981 Avicennia marina HOM05D006028 ORTHO05D007784 3.7e-136 488.8 381 69.6
Oeu008432.1 Olea europaea HOM05D006028 ORTHO05D007784 6.4e-128 461.5 379 63.1
Lj2A441T56 Lonicera japonica HOM05D006028 ORTHO05D007784 1.3e-120 437.2 380 63.7
CSS0038458 Camellia sinensis var. sinensis HOM05D006028 ORTHO05D007784 5.4e-119 431.8 379 60.2
PGSC0003DMG400026405 Solanum tuberosum HOM05D006028 ORTHO05D007784 7.1e-119 431.4 379 59.6
Sopen02g030790 Solanum pennellii HOM05D006028 ORTHO05D007784 1.0e-117 427.6 379 59.4
CSS0040274 Camellia sinensis var. sinensis HOM05D006028 ORTHO05D007784 2.5e-116 422.9 379 58.8
Cc07_g08770 Coffea canephora HOM05D006028 ORTHO05D007784 1.6e-115 420.2 378 59.3
CAN.G625.27 Capsicum annuum HOM05D006028 ORTHO05D007784 6.2e-115 418.3 379 58.3
Nitab4.5_0000912g0170 Nicotiana tabacum HOM05D006028 ORTHO05D007784 1.4e-114 417.2 379 58.6
Hma1.2p1_1109F.1_g258060 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 4.0e-114 415.6 380 57.9
Nitab4.5_0004416g0010 Nicotiana tabacum HOM05D006028 ORTHO05D007784 8.9e-114 414.5 379 58.0
Rhsim10G0067700 Rhododendron simsii HOM05D006028 ORTHO05D007784 5.8e-113 411.8 379 58.8
Prupe.3G142900 Prunus persica HOM05D006028 ORTHO05D007784 9.9e-113 411.0 382 57.3
Actinidia15886 Actinidia chinensis HOM05D006028 ORTHO05D007784 3.7e-112 409.1 378 57.9
Cfa007919 Carpinus fangiana HOM05D006028 ORTHO05D007784 3.2e-111 406.0 379 57.5
Haze_14158 Corylus avellana HOM05D006028 ORTHO05D007784 5.4e-111 405.2 386 57.0
Thecc.04G133100 Theobroma cacao HOM05D006028 ORTHO05D007784 9.2e-111 404.4 382 58.4
CiPaw.03G061900 Carya illinoinensis HOM05D006028 ORTHO05D007784 7.8e-110 401.4 379 56.7
QL02p051229 Quercus lobata HOM05D006028 ORTHO05D007784 3.9e-109 399.1 378 57.1
ECA246G2307 Erigeron canadensis HOM05D006028 ORTHO05D007784 6.6e-109 398.3 379 57.0
Manes.02G069100 Manihot esculenta HOM05D006028 ORTHO05D007784 1.5e-108 397.1 379 56.7
Ciclev10011993m.g Citrus clementina HOM05D006028 ORTHO05D007784 2.1e-107 393.3 378 55.3
HanXRQChr12g0375811 Helianthus annuus HOM05D006028 ORTHO05D007784 8.1e-107 391.3 376 56.4
Potri.004G099000 Populus trichocarpa HOM05D006028 ORTHO05D007784 1.8e-106 390.2 382 56.3
TWI53G1478 Tripterygium wilfordii HOM05D006028 ORTHO05D007784 4.0e-106 389.0 380 55.5
CsaV3_3G020280 Cucumis sativus L. HOM05D006028 ORTHO05D007784 6.8e-106 388.3 379 56.7
GSVIVG01031016001 Vitis vinifera HOM05D006028 ORTHO05D007784 8.9e-106 387.9 379 55.1
Lsat_1_v5_gn_3_79681 Lactuca sativa HOM05D006028 ORTHO05D007784 5.8e-105 385.2 376 56.6
CANSAT78G1220 Cannabis sativa HOM05D006028 ORTHO05D007784 7.6e-105 384.8 378 56.1
TAR629G2682 Trochodendron aralioides HOM05D006028 ORTHO05D007784 1.9e-103 380.2 379 56.2
MELO3C023751.2 Cucumis melo HOM05D006028 ORTHO05D007784 1.6e-102 377.1 380 56.1
PGR004G1556 Punica granatum HOM05D006028 ORTHO05D007784 1.9e-100 370.2 378 54.2
Atru.chr1.1685 Acer truncatum HOM05D006028 ORTHO05D007784 9.6e-100 367.9 379 54.4
FvH4_4g11350 Fragaria vesca HOM05D006028 ORTHO05D007784 1.6e-99 367.1 378 53.4
FAN07G0954 Fragaria x ananassa HOM05D006028 ORTHO05D007784 1.6e-99 367.1 378 53.4
Glyma.14G193600 Glycine max HOM05D006028 ORTHO05D007784 2.1e-99 366.7 376 54.5
AUR62023297 Chenopodium quinoa HOM05D006028 ORTHO05D007784 2.8e-99 366.3 383 55.4
ClCG05G012120 Citrullus lanatus HOM05D006028 ORTHO05D007784 4.8e-99 365.5 379 57.0
Gohir.A12G053400 Gossypium hirsutum HOM05D006028 ORTHO05D007784 4.8e-99 365.5 382 54.2
Glyma.02G226700 Glycine max HOM05D006028 ORTHO05D007784 6.2e-99 365.2 376 54.5
Peaxi162Scf00394g00620 Petunia axillaris HOM05D006028 ORTHO05D007784 8.1e-99 364.8 379 54.9
Gohir.D12G052100 Gossypium hirsutum HOM05D006028 ORTHO05D007784 1.8e-98 363.6 381 53.5
Gorai.008G055200 Gossypium raimondii HOM05D006028 ORTHO05D007784 1.8e-98 363.6 382 53.7
Hund13711 Selenicereus undatus HOM05D006028 ORTHO05D007784 1.8e-98 363.6 379 53.6
Dinv34819 Davidia involucrata HOM05D006028 ORTHO05D007784 6.9e-98 361.7 379 55.7
COL.COLO4_09340 Corchorus olitorius HOM05D006028 ORTHO05D007784 1.2e-97 360.9 383 53.8
LjContig00155g0021894 Lotus japonicus HOM05D006028 ORTHO05D007784 1.5e-97 360.5 380 55.0
RcHm_v2.0_Chr6g0273571 Rosa chinensis HOM05D006028 ORTHO05D007784 2.0e-97 360.1 377 53.6
Duzib138G1322 Durio zibethinus HOM05D006028 ORTHO05D007784 3.4e-97 359.4 381 53.8
Aqoxy4G02499 Aquilegia oxysepala HOM05D006028 ORTHO05D007784 5.8e-97 358.6 381 54.6
EL10Ac2g04560 Beta vulgaris HOM05D006028 ORTHO05D007784 4.9e-96 355.5 376 54.5
Medtr5g070860 Medicago truncatula HOM05D006028 ORTHO05D007784 8.4e-96 354.8 377 55.2
VMungo0647G1142 Vigna mungo HOM05D006028 ORTHO05D007784 1.1e-95 354.4 376 54.0
Phvul.008G261300 Phaseolus vulgaris HOM05D006028 ORTHO05D007784 2.4e-95 353.2 376 54.0
TPR.G23017 Trifolium pratense HOM05D006028 ORTHO05D007784 4.2e-95 352.4 376 54.5
Lalb_Chr10g0103311 Lupinus albus HOM05D006028 ORTHO05D007784 2.1e-94 350.1 377 54.1
PSO017G5051 Papaver somniferum HOM05D006028 ORTHO05D007784 2.1e-94 350.1 384 52.6
AUR62009005 Chenopodium quinoa HOM05D006028 ORTHO05D007784 1.5e-92 344.0 401 51.1
Ah.16g101740 Amaranthus hybridus HOM05D006028 ORTHO05D007784 2.1e-91 340.1 375 50.9
PSO478G1932 Papaver somniferum HOM05D006028 ORTHO05D007784 4.8e-91 339.0 384 51.6
THA.LOC104820944 Tarenaya hassleriana HOM05D006028 ORTHO05D007784 1.8e-90 337.0 385 51.9
vmacro05550 Vaccinium macrocarpon HOM05D006028 ORTHO05D007784 2.4e-90 336.7 380 51.1
HPP92_018993 Vanilla planifolia HOM05D006028 ORTHO05D007784 1.2e-89 334.3 383 49.1
ATR1125G043 Amborella trichopoda HOM05D006028 ORTHO05D007784 3.4e-89 332.8 393 48.6
Eucgr.F02499 Eucalyptus grandis HOM05D006028 ORTHO05D007784 4.5e-89 332.4 328 53.0
Thhalv10022737m.g Eutrema salsugineum HOM05D006028 ORTHO05D007784 2.4e-87 326.6 383 50.1
Nn3g17886 Nelumbo nucifera HOM05D006028 ORTHO05D007784 2.4e-87 326.6 381 50.1
AT2G18410 Arabidopsis thaliana HOM05D006028 ORTHO05D007784 7.1e-87 325.1 383 50.4
Sp3g31820 Schrenkiella parvula HOM05D006028 ORTHO05D007784 3.5e-86 322.8 386 50.0
SpUn0030_0010 Schrenkiella parvula HOM05D006028 ORTHO05D007784 3.5e-86 322.8 386 50.0
Carub.0003s3256 Capsella rubella HOM05D006028 ORTHO05D007784 4.6e-86 322.4 386 49.7
MD00G1149900 Malus domestica HOM05D006028 ORTHO05D007784 4.6e-86 322.4 326 55.8
AL3G51690 Arabidopsis lyrata HOM05D006028 ORTHO05D007784 1.0e-85 321.2 386 49.0
arahy.Tifrunner.gnm1.ann1.QNRR2Z Arachis hypogaea HOM05D006028 ORTHO05D007784 1.8e-85 320.5 376 51.1
Sabra04G0080900 Salix brachista HOM05D006028 ORTHO05D007784 1.5e-84 317.4 385 48.8
BcaC06g36407 Brassica carinata HOM05D006028 ORTHO05D007784 1.9e-84 317.0 383 49.3
A07p02330 Brassica napus HOM05D006028 ORTHO05D007784 1.6e-83 313.9 391 49.4
BraA07t28024Z Brassica rapa HOM05D006028 ORTHO05D007784 6.2e-83 312.0 391 48.8
Aa31LG8G15620 Aethionema arabicum HOM05D006028 ORTHO05D007784 4.0e-82 309.3 382 48.7
C07p04450 Brassica napus HOM05D006028 ORTHO05D007784 4.0e-82 309.3 387 48.8
arahy.Tifrunner.gnm1.ann1.I9N3Y5 Arachis hypogaea HOM05D006028 ORTHO05D007784 1.2e-81 307.8 376 50.0
BolC7t40839H Brassica oleracea HOM05D006028 ORTHO05D007784 2.0e-81 307.0 387 48.8
CARHR109010 Cardamine hirsuta HOM05D006028 ORTHO05D007784 7.6e-81 305.1 384 49.0
BcaB03g16641 Brassica carinata HOM05D006028 ORTHO05D007784 1.9e-79 300.4 410 46.6
Zm00001eb007750 Zea mays HOM05D006028 ORTHO05D007784 6.0e-78 295.4 388 45.6
Os03g0201700 Oryza sativa ssp. japonica HOM05D006028 ORTHO05D007784 4.3e-76 289.3 387 43.7
CDE05G1052 Ceratophyllum demersum HOM05D006028 ORTHO05D007784 1.0e-72 278.1 383 43.9
Sed0006429 Sechium edule HOM05D006028 ORTHO05D007784 1.4e-71 274.2 283 56.9
Sc10g0001120 Simmondsia chinensis HOM05D006028 ORTHO05D007784 8.7e-69 265.0 258 52.3
Ca_05599_v3 Cicer arietinum L. HOM05D006028 ORTHO05D007784 5.9e-65 252.3 315 50.2
Pp3c5_13580 Physcomitrium patens HOM05D006028 ORTHO05D007784 7.2e-63 245.4 392 40.3
unitig_748.g7283 Utricularia gibba HOM05D006028 ORTHO05D007784 1.5e-60 237.7 378 42.1
Psat0s2922g0040 Pisum sativum HOM05D006028 ORTHO05D007784 1.1e-58 231.5 258 49.6
Hma1.2p1_1109F.1_g258050 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 1.5e-57 227.6 200 58.0
Haze_14159 Corylus avellana HOM05D006028 ORTHO05D007784 5.9e-57 225.7 226 57.5
Mapoly0156s0014 Marchantia polymorpha HOM05D006028 ORTHO05D007784 7.2e-55 218.8 391 38.4
SMO351G0506 Selaginella moellendorffii HOM05D006028 ORTHO05D007784 1.8e-50 204.1 374 37.7
Solyc02g086100.4 Solanum lycopersicum HOM05D006028 ORTHO05D007784 4.4e-44 183.0 169 60.9
SEGI_33346 Sequoiadendron giganteum HOM05D006028 ORTHO05D007784 9.7e-44 181.8 234 47.9
Hma1.2p1_1109F.1_g258070 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 1.7e-43 181.0 170 57.6
RcHm_v2.0_Chr1g0332721 Rosa chinensis HOM05D006028 ORTHO05D007784 5.3e-42 176.0 179 53.1
SMO009G0016 Selaginella moellendorffii HOM05D006028 ORTHO05D007784 1.2e-41 174.9 371 34.2
QL02p051191 Quercus lobata HOM05D006028 ORTHO05D007784 3.5e-41 173.3 171 56.7
SHI29124 Sapria himalayana HOM05D006028 ORTHO05D007784 3.6e-38 163.3 281 37.7
Potri.017G115566 Populus trichocarpa HOM05D006028 ORTHO05D007784 1.8e-37 161.0 167 50.9
Cpa.g.sc282.2 Carica papaya HOM05D006028 ORTHO05D007784 2.4e-26 124.0 192 39.1
Gorai.007G000700 Gossypium raimondii HOM05D006028 ORTHO05D007784 1.6e-25 121.3 163 46.6
FAN17G0046 Fragaria x ananassa HOM05D006028 ORTHO05D007784 6.6e-24 115.9 161 44.1
Sabra17G0095800 Salix brachista HOM05D006028 ORTHO05D007784 5.6e-23 112.8 160 46.9
Gohir.1Z049310 Gossypium hirsutum HOM05D006028 ORTHO05D007784 7.2e-23 112.5 186 36.6
Gohir.A09G249300 Gossypium hirsutum HOM05D006028 ORTHO05D007784 3.6e-22 110.2 186 36.0
AagrBONN_evm.TU.Sc2ySwM_368.1688 Anthoceros agrestis HOM05D006028 ORTHO05D007784 1.3e-19 101.7 143 49.0
AagrBONN_evm.TU.Sc2ySwM_368.1687 Anthoceros agrestis HOM05D006028 ORTHO05D007784 2.0e-17 94.4 168 31.5
QL02p051195 Quercus lobata HOM05D006028 ORTHO05D007784 3.1e-13 80.5 70 55.7
Nitab4.5_0014016g0010 Nicotiana tabacum HOM05D006028 ORTHO05D007784 2.0e-12 77.8 83 45.8
Gohir.A06G000200 Gossypium hirsutum HOM05D006028 ORTHO05D007784 8.3e-11 72.4 96 42.7
Gohir.A12G000400 Gossypium hirsutum HOM05D006028 ORTHO05D007784 1.1e-10 72.0 89 46.1
SEGI_36511 Sequoiadendron giganteum HOM05D006028 ORTHO05D007784 1.6e-09 68.2 86 46.5
CBR_g37698 Chara braunii HOM05D006028 ORTHO05D007784 8.1e-06 55.8 435 23.0


User provided reference genes

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